| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2844227 | 111 (1.250) | 6 (0.070) | 6/230 | NT | 5.3% | coding (457/1005 nt) | PP_2495 | hypothetical protein |
| ? | NC_002947 | = 2844238 | 111 (1.340) | coding (446/1005 nt) | PP_2495 | hypothetical protein | |||||
CTCGATCAGGCGAGCGATCATCTGCTCATCCCGCTCGATGCGGTGGATCTCCAGCGTCTGACCACCCAGCAGTACTGCTACATCCGCCGCCTGCTTGCCGGTGACGGCGAGCTGGTGCATCACCTGCAGCTGCACATACTCCGGCACGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2844078‑2844227‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcacgccTCTGGAAAGAGGGCGTGCCGGAGTATGTGCAGCTGCAGGTGATGCACCAGCTCGCCGTCACCGGCAAGCAGGCGGCGGATGTAGCAGTACTGCTGGGTGGTCAGACGCTGGAGATCCACCGCATCGAGCGGGATGAGCAGATGATCG < NC_002947/2844238‑2844092 CTCGATCAGGCGAGCGATCATCTGCTCATCCCGCTCGATGCGGTGGATCTCCAGCGTCTGACCACCCAGCAGTACTGCTACATCCGCCGCCTGCTTGCCGGTGACGGCGAGCTGGTGCATCACCTGCAGCTGCACATACTCCG < 2:77525/143‑1CTCGATCAGGCGAGCGATCATCTGCTCATCCCGCTCGATGCGGTGGATCTCCAGCGTCTGACCACCCAGCAGTACTGCTACATCCGCCGCCTGCTTGCCGGTGACGGCGAGCTGGTGCATCACCTGCAGCTGCACATACTCCG > 1:77525/1‑143 ACCACCCAGCAGTACTGCTACATCCGCCGCCTGCTTGCCGGTGACGGCGAGCTGGTGCATCACCTGCAGCTGCACATACTCCGGCACGCCTCTGGAAAGAGGGCGT < 1:644565/106‑1 ACCACCCAGCAGTACTGCTACATCCGCCGCCTGCTTGCCGGTGACGGCGAGCTGGTGCATCACCTGCAGCTGCACATACTCCGGCACGCCTCTGGAAAGAGGGCGT > 2:644565/1‑106 CCGCCGCCTGCTTGCCGGTGACGGCGAGCTGGTGCATCACCTGCAGCTGCACATACTCCGGCAC > 1:1589734/1‑64 CCGCCGCCTGCTTGCCGGTGACGGCGAGCTGGTGCATCACCTGCAGCTGCACATACTCCGGCAC < 2:1589734/64‑1 CGCCGCCTGCTTGCCGGTGACGGCGAGCTGGTGCATCACCTGCAGCTGCACATACTCCGGCACGCCTCTGGAAAGAGGGCGTGCCGGA > 2:883059/1‑88 CGCCGCCTGCTTGCCGGTGACGGCGAGCTGGTGCATCACCTGCAGCTGCACATACTCCGGCACGCCTCTGGAAAGAGGGCGTGCCGGA < 1:883059/88‑1 GGCGAGCTGGTGCATCACCTGCAGCTGCACATACTCCGGCACGCCTCTGGAAAGAGGGCGTGCCG < 1:185501/65‑1 GGCGAGCTGGTGCATCACCTGCAGCTGCACATACTCCGGCACGCCTCTGGAAAGAGGGCGTGCCG > 2:185501/1‑65 GGCACGCCTCTGGAAAGAGGGCGTGCCGGAGTATGTGCAGCTGCAGGTGATGCACCAGCTCGCCGTCACCGGCAAGCAGGCGGCGGATGTAGCAGTACTGCTGGGTGGTCAGACGCTGGAGATCCACCGCATCGAGCGGGATGAGCAGAT < 2:1082956/150‑1 CACGCCTCTGGAAAGAGGGCGTGCCGGAGTATGTGCAGCTGCAGGTGATGCACCAGCTCGCCGTCACCGGCAAGCAGGCGGCGGATGTAGCAGTACTACTGGGTGGTCAGACGCTGGAGATCCACCGCATCGAGCGGGATGAGCAGATGA < 1:1431899/150‑1 ACGCCTCTGGAAAGAGGGCGTGCCGGAGTATGTGCAGCTGCAGGTGATGCACCAGCTCGCCGTCACCGGCAAGCAGGCGGCGGATGTAGCAGTACTGCTGGGTGGTCAGACGCTGGAGATCCACCGCATCGAGCGGGATGAGCAGATGAT > 2:983186/1‑150 ACGCCTCTGGAAAGAGGGCGTGCCGGAGTATGTGCAGCTGCAGGTGATGCACCAGCTCGCCGTCACCGGCAAGCAGGCGGCGGATGTAGCAGTACTGCTGGGTGGTCAGACGCTGGAGATCCA < 1:723134/123‑1 ACGCCTCTGGAAAGAGGGCGTGCCGGAGTATGTGCAGCTGCAGGTGATGCACCAGCTCGCCGTCACCGGCAAGCAGGCGGCGGATGTAGCAGTACTGCTGGGTGGTCAGACGCTGGAGATCCA > 2:723134/1‑123 GCCTCTGGAAAGAGGGCGTGCCGGAGTATGTGCAGCTGCAGGTGATGCACCAGCTCGCCGTCACCGGCAAGCAGGCGGCGGATGTAGCAGTACTGCTGGGTGGTCAGACGCTGGAGATCCACCGCATCGAGCGGGATGAGCAGATGATCG > 1:1601976/1‑150 GCCTCTGGAAAGAGGGCGTGCCGGAGTATGTGCAGCTGCAGGTGATGCACCAGCTCGCCGTCACCGGCAAGCAGGCGGC < 2:357609/79‑1 GCCTCTGGAAAGAGGGCGTGCCGGAGTATGTGCAGCTGCAGGTGATGCACCAGCTCGCCGTCACCGGCAAGCAGGCGGC > 1:357609/1‑79 CTCGATCAGGCGAGCGATCATCTGCTCATCCCGCTCGATGCGGTGGATCTCCAGCGTCTGACCACCCAGCAGTACTGCTACATCCGCCGCCTGCTTGCCGGTGACGGCGAGCTGGTGCATCACCTGCAGCTGCACATACTCCGGCACGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2844078‑2844227‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcacgccTCTGGAAAGAGGGCGTGCCGGAGTATGTGCAGCTGCAGGTGATGCACCAGCTCGCCGTCACCGGCAAGCAGGCGGCGGATGTAGCAGTACTGCTGGGTGGTCAGACGCTGGAGATCCACCGCATCGAGCGGGATGAGCAGATGATCG < NC_002947/2844238‑2844092 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |