| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3222480 = | 100 (1.130) | 10 (0.120) | 8/236 | NT | 10.5% | coding (257/1653 nt) | PP_2823 | methyl‑accepting chemotaxis transducer |
| ? | NC_002947 | 3222520 = | 74 (0.870) | coding (217/1653 nt) | PP_2823 | methyl‑accepting chemotaxis transducer | |||||
TGTTCGTGGGCTACACCGCGGTGCAACTGGACGACAACGACAACCGATTGGTGTCGCTCGAAAAACAGCGCTACCCAACGCTGGAAGCTGCCGACAACGTGATCTTCCAGTTCTCCCGCCTGCCCGGCCTGCTCAACAGCGCCGTGGCA‑GCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3222633‑3222480‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgggAGAACTGGAAGATCACGTTGTCGGCAGCTTCCAGCGTTGGGTAGCGCTGTTTTTCGAGCGACACCAATCGGTTGTCGTTGTCGTCCAGTTGCACCGCGGTGTAGCCCACGAACAGCAACATGCCGAACAGGGCGATGGCAGGTGGCA > NC_002947/3222520‑3222666 TGTTCGTGGGCTACACCGCGGTGCAACTGGACGACAACGACAACCGATTGGTGTCGCTCGAAAAACAGCGCTACCCAACGCTGGAAGCTGCCGACAACGTGATCTTCCAGTTCTCCCGCCTGCCCGGCCTGCTCAACAGCGCCGTGGCA‑G > 1:1168696/1‑150TGTTCGTGGGCTACACCGCGGTGCAACTGGACGACAACGACAACCGATTGGTGTCGCTCGAAAAACAGCGCTACCCAACGCTGGAAGCTGCCGACAACGTGATCTTCCAGTTCTCCCGCCTGCCCGGCCTGCTCAACAGCGCCGTGGCA‑G > 2:2088308/1‑150 TCGTGGGCTACACCGCGGTGCAACTGGACGACAACGACAACCGATTGGTGTCGCTCGAAAAACAGCGCTACCCAACGCTGGAAGCTGCCGACAACGTGATCTTCCAGTTCTCCCGCCTGCCCGGCCTGCTCAACAGCGCCGTGGCA‑GCGG < 1:1675804/150‑1 AACGTGATCTTCCAGTTCTCCCGCCTGCCCGGCCTGCTCAACAGCGCCGTGGCA‑GCGGGAGAACTGGAAGATCACGTTGTCGGCAGCTTCCAGCGTTGGGTAGCGCTGTTTTTCGAGCGACACCAATCGGTTGTCGTT < 1:2207979/138‑1 AACGTGATCTTCCAGTTCTCCCGCCTGCCCGGCCTGCTCAACAGCGCCGTGGCA‑GCGGGAGAACTGGAAGATCACGTTGTCGGCAGCTTCCAGCGTTGGGTAGCGCTGTTTTTCGAGCGACACCAATCGGTTGTCGTT > 2:2207979/1‑138 TTCCAGTTCTCCCGCCTGCCCGGCCTGCTCAACAGCGCCGTGGCA‑GCGGGAGAACTGGAAGATCACGTTGTCGGCAGCTTCCAGCGTT < 1:959163/88‑1 TTCCAGTTCTCCCGCCTGCCCGGCCTGCTCAACAGCGCCGTGGCA‑GCGGGAGAACTGGAAGATCACGTTGTCGGCAGCTTCCAGCGTT > 2:959163/1‑88 TCCCGCCTGCCCGGCCTGCTCAACAGCGCCGTAGCAGGCGGGAGAACTGGAAGATCACGTTGTCGGCAGCTTCCAGCGTTGGGTAGCGCTGTTTTTC < 1:1576814/97‑1 TCCCGCCTGCCCGGCCTGCTCAACAGCGCCGTAGCAGGCGGGAGAACTGGAAGATCACGTTGTCGGCAGCTTCCAGCGTTGGGTAGCGCTGTTTTTC > 2:1576814/1‑97 GCCTGCCCGGCCTGCTCAACAGCGCCG‑GGCAGGCGGGAGAACTGGAAGATCACGTTGTCGGCAGCTTCCAGCGTTGGGTAGCGCTGTTTTTCGAGCGACACCAATCGGTTGTCGTTGTCGTCCAGTTGCACCGCGGTGTAGCCCACGAAC > 2:1039389/1‑150 CCGGCCTGCTCAACAGCGCCGTGGCAGGCGGGAGAACTGGAAGATCACGTTGTCGGCAGCTTCCAGCGTTGGGTAGCGCTGTTTTTCGAGCGACACCAATCGGTTGTCGTTGTCGTCCAGTTGCACCGCGGTGTAGCCCACGAACAGCAA > 1:1174888/1‑150 CCGGCCTGCTCAACAGCGCCGTGGCAGGCGGGAGAACTGGAAGATCACGTTGTCGGCAGCTTCCAGCGTTGGGTAGCGCTGTTTTTCGAGCGACACCAATCGGTTGTCGTTGTCGTCCAGTTGCACCGCGGTGTAGCCCACGAACAGCAA > 1:2150263/1‑150 CCGGCCTGCTCAACAGCGCCGTGGCAGGCGGGAGAACTGGAAGATCACGTTGTCGGCAGCTTCCAGCGTCGGGTAGCGCTGTTTTTCGAGCGACACCAATCGGTTGTCGTTGTCGTCCAGTTGCACCGCGGTGTAGCCCACGAACAGCAA > 1:1627814/1‑150 GGGAGAACTGGAAGATCACGTTGTCGGCAGCTTCCAGCGTCGGGTAGCGCTGTTTTTCGAGCGACACCAATCGGTTGTCGTTGTCGTCCAGTTGCACCGCGGTGTAGCCCACGAACAGCAACATGCCGAACAGGGCGATGGCAGGTGGCA < 2:1627814/150‑1 GGAGAACTGGAAGATCACGTTGTCGGCAGCTTCCAGCGTTGGGTAGCGCTGTTTTTCGAGCGACACCAATCGGTTGTCGTTGTCGTCCAGTT < 1:523692/92‑1 GGAGAACTGGAAGATCACGTTGTCGGCAGCTTCCAGCGTTGGGTAGCGCTGTTTTTCGAGCGACACCAATCGGTTGTCGTTGTCGTCCAGTT > 2:523692/1‑92 TGTTCGTGGGCTACACCGCGGTGCAACTGGACGACAACGACAACCGATTGGTGTCGCTCGAAAAACAGCGCTACCCAACGCTGGAAGCTGCCGACAACGTGATCTTCCAGTTCTCCCGCCTGCCCGGCCTGCTCAACAGCGCCGTGGCA‑GCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3222633‑3222480‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgggAGAACTGGAAGATCACGTTGTCGGCAGCTTCCAGCGTTGGGTAGCGCTGTTTTTCGAGCGACACCAATCGGTTGTCGTTGTCGTCCAGTTGCACCGCGGTGTAGCCCACGAACAGCAACATGCCGAACAGGGCGATGGCAGGTGGCA > NC_002947/3222520‑3222666 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |