| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3649432 | 83 (0.940) | 5 (0.060) | 4/234 | NT | 6.3% | intergenic (+866/+825) | PP_3214/PP_3216 | hypothetical protein/cysteine dioxygenase |
| ? | NC_002947 | = 3649458 | 71 (0.840) | intergenic (+892/+799) | PP_3214/PP_3216 | hypothetical protein/cysteine dioxygenase | |||||
GCAGTCAGCCCGTCGACCACAGCGACCTGCCAGCCCATCTGTGCCAGCCACGAGGCG‑CTCATGTTGGCGCGCACGCCATCGTCGTCCACCAGCGCGATGCGCGCCCCGCGCACACTGGCGACGTGGTCGGTCTCTTGAACCAGTTGCCCGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3649279‑3649432‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccggTCATCTGCCGGGCAGCCGCCCGGTGCCCGGCGGGCAACTGGTTCAAGAGACCGACCACGTCGCCAGTGTGCGCGGGGCGCGCATCGCGCTGGTGGACGACGATGGCGTGCGCGCCAACATGAGCGCCTCGTGGCTGGCACAGATGGGCT < NC_002947/3649458‑3649310 GCAGTCAGCCCGTCGACCACAGCGACCTGCCAGCCCATCTGTGCCAGCCACGAGGCG‑CTCATGTTGGCGCGCACGCCATCGTCGCCCACCAGCGCGATGCGCGCCCCGCGCGCCCTGGCGACGTGGTCGGGCTCGTGAACCAGGTGCCCG > 2:924495/1‑150 GTCAGCCCGTCGACCACAGCGCCCCGCCAGACAACCTGTGCCAGCCACGAGACGTCTC‑CATTGGCGCGCACGCCATCGTCGTCCACCAGCGCGATGCGCGCCCCGCGCACACTGGCGACGTGGTCGGTCTCTTGAACCAGTTGCCCGCCG < 1:24380/150‑1 CCATCTGTGCCAGCCACGAGGCG‑CTCANGTTGGCGCGCACNCCATCGNCGTCCACCAGCGCGATGCGCGCCCCGCGCACACTGGCGACGTGGTCGGTCTCTTGAACCAGTTGCCCGCCGGTCATCTGCCGGGCAGCCGCCCGGTGCCCGG > 1:2054243/1‑150 TCTGTGCCAGCCACGAGGCG‑CTCATGTTGGCGCGCACGCCATCGTCGTCCACCAGCGCGATGCGCGCCCCGCGCACACTGGCGACGTGGTCGGTCTCTTGAACCAGTTGCCCGCCGGTCATCTGCCGGGCAGCCGCCCGGTGCCCGGCGG < 1:351931/150‑1 TCTGTGCCAGCCACGAGGCG‑CTCATGTTGGCGCGCACGCCATCGTCGTCCACCAGCGCGATGCGCGCCCCGCGCACACTGGCGACGTGGTCGGTCTCTTGAACCAGTTGCCCGCCGGTCATCTGCCGGGCAGCCGCCCGGTGCCCGGCGG < 2:2054243/150‑1 TTGGCGCGCACGCCATCGTCGTCCACCAGCGCGATGCGCGCCCCGCGCACACTGGCGACGTGGTCGGTCTCTTGAACCAGTTGCCCGCCGGTCATCTGCCGGGCAGCCGCCCGGTGCCCGGCGGGCAACTG > 1:851161/1‑131 TTGGCGCGCACGCCATCGTCGTCCACCAGCGCGATGCGCGCCCCGCGCACACTGGCGACGTGGTCGGTCTCTTGAACCAGTTGCCCGCCGGTCATCTGCCGGGCAGCCGCCCGGTGCCCGGCGGGCAACTG < 2:851161/131‑1 GCCGGTCATCTGCCGGGCAGCCGCCCGGTGCCCGGCGGGCAACTGGTTCAAGAGACCGACCACGTCGCCAGTGTGCGCGGGGCGCGCATCGCGCTGGTGGACGACGATGGCGTGCGCGCCAACATGAGCGCCTCGTGGCTGGCACAGATG < 2:1193986/150‑1 CGGTCATCTGCCGGGCAGCCGCCCGGTGCCCGGCGGGCAACTGGTTCAAGAGACCGACCACGTCGCCAGTGTGCGCGGGGCGCGCATCGCGCTGG < 1:634117/95‑1 CGGTCATCTGCCGGGCAGCCGCCCGGTGCCCGGCGGGCAACTGGTTCAAGAGACCGACCACGTCGCCAGTGTGCGCGGGGCGCGCATCGCGCTGG > 2:634117/1‑95 GGTCATCTGCCGGGCAGCCGCCCGGTGCCCGGCGGGCAACTGGTTCAAGAGACCGACCACGTCGCCAGTGTGCGCGGGGCGCGCATCGCGCTGGTGGACGACGATGGCGTGCGCGCCAACATGAGCGCCTCGTGGCTGGCACAGATGGGC < 1:1472964/150‑1 GGTCATCTGCCGGGCAGCCGCCCGGTGCCCGGCGGGCAACTGGTTCAAGAGACCGACCACGTCGCCAGTGTGCGCGGGGCGCGCATCGCGCTGGTGGACGACGATGGCGTGCGCGCCAACATGAGCGCCTCGTGGCTGGCACAGATGGGC > 1:1900761/1‑150 GTCATCTGCCGGGCAGCCGCCCGGTGCCCGGCGGGCAACTGGTTCAAGAGACCGACCACGTCGCAAGTGTGCGCGGGGCGCGCATCGCGCTGGTGGACGACGATGGCGTGCGCGCCAACATGAGCGCCTCGTGGCTGGCACAGATGGGCT < 1:254697/150‑1 GCAGTCAGCCCGTCGACCACAGCGACCTGCCAGCCCATCTGTGCCAGCCACGAGGCG‑CTCATGTTGGCGCGCACGCCATCGTCGTCCACCAGCGCGATGCGCGCCCCGCGCACACTGGCGACGTGGTCGGTCTCTTGAACCAGTTGCCCGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3649279‑3649432‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccggTCATCTGCCGGGCAGCCGCCCGGTGCCCGGCGGGCAACTGGTTCAAGAGACCGACCACGTCGCCAGTGTGCGCGGGGCGCGCATCGCGCTGGTGGACGACGATGGCGTGCGCGCCAACATGAGCGCCTCGTGGCTGGCACAGATGGGCT < NC_002947/3649458‑3649310 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |