| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3723725 | 88 (0.990) | 9 (0.110) | 8/228 | NT | 9.8% | intergenic (+12/+18) | PP_3288/PP_3289 | universal stress protein family protein/acetyltransferase |
| ? | NC_002947 | = 3723729 | 84 (1.020) | intergenic (+16/+14) | PP_3288/PP_3289 | universal stress protein family protein/acetyltransferase | |||||
GGATAACAATGATATCGACGTACTGGTCATGGGCAGTTATCACCACCGTGGCATCGGCTGGTTCATCGGCAGTACTGCCGAGCGCGTTATGCATCGGTTGTCCAGCAGTGTGCTGGTGATTTCTCCAGAGCGCTCCCAAGGCTGAAGCACAAGGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3723569‑3723725‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acaaggcccTTGCGGGCCTTGTGCTTCAGCCTTGGGAGCGCTCTGGAGAAATCACCAGCACACTGCTGGACAACCGATGCATAACGCGCTCGGCAGTACTGCCGATGAACCAGCCGATGCCACGGTGGTGATAACTGCCCATGAC < NC_002947/3723729‑3723594 GGATAACAATGATATCGACGTACTGTTCATGGGCAGTTATCACCACCGTGGCAGCGGCTGGTTCATCGGCAGTACTGCCGAGCGCGTTATGCATCGGTTGTCCAGCAGTTTGCTGGTGATTTCTCCAGAGCGCTCCCAAGGCTGAAGCAC < 1:2300807/150‑1 GATAACAATGATATCAACGTACAGGTCATGGGCAGTTATAACCACCGTGGCATCGGCTGGTTCATCGGCAGTACTGCCGAGCGCGTTATGCATCGGTTGTCCAGCAGTGAGCTGGTGCTTTCTCCAGAGAGCTCCCAAGGCTGAAGAACA > 2:2300807/1‑150 TAACAATCATATGGACGTACTGGTCATGGGCAGTTATCACCACCGTGGCATCGGCTGGTTCATCGGCAGTACTGCCGAGCGCGTTATGCATCGGTTGTCCAGCAGTGTTCTGGTGATTTCTCCAGAGCGCTCCCAAGGCTGAAGCACAAG < 2:680123/150‑1 TACTGGTCATGGGCAGTTATCACCACCGTGGCATCGGCTGGTTCATCGGCAGTACTGCCGAGCGCGTTATGCATCGGTTGTCCAGCAGTGTGCTGGTGATTTCTCCAGAGCGCTCCCAAGGCTGAAGCACAAGGCCCTTGCGGGCCTTGT < 1:1678662/150‑1 TACTGGTCATGGGCAGTTATCACCACCGTGGCATCGGCGTGTTCATCGGCAGTACTGCCGAGCGCGTTATGCATCGGTTGTCCAGCAGTGTGCTGGTGATTTCTCCAGAGCGCTCCCAAGGCTGAAGCACAAGGCCCTTGCGGGCCTTGT < 1:508120/150‑1 ACTGGTCATGGCGAGTTATCACCACCGTGGCATCGGCTGGTTCATCGGCAGTACTCCCGAGCCCGTAACTCATCGCTTGACGAGCAGTGTGCTGGTGATTTCTCCAGAGCGCTCCCAAGGCTGAAGCACAAGGCCCTTGCGGGCCTTGTG < 1:172134/150‑1 ACCACCGTGGCATCGGCTGGTTCATCGGCAGTACTGCCGAGCGCGTTATGCATCGGTTGTCCAGCAGTGTGCTGGTGATTTCTCCAGAGCGCTCCCAAGGCTGAAGCACAAGGCCCTTGCGGGCCTTGT > 1:1765057/1‑129 ACCACCGTGGCATCGGCTGGTTCATCGGCAGTACTGCCGAGCGCGTTATGCATCGGTTGTCCAGCAGTGTGCTGGTGATTTCTCCAGAGCGCTCCCAAGGCTGAAGCACAAGGCCCTTGCGGGCCTTGT < 2:1765057/129‑1 GCTGGTTCATCGGCAGTACTGCCGAGCGCGTTATGCATCGGTTGTCCAGCAGTGTGCTGGTGATTTCTCCAGAGCGCTCCCAAGGCTGAAGCA < 1:2175068/93‑1 GCTGGTTCATCGGCAGTACTGCCGAGCGCGTTATGCATCGGTTGTCCAGCAGTGTGCTGGTGATTTCTCCAGAGCGCTCCCAAGGCTGAAGCA > 2:2175068/1‑93 TCGGCAGTACTGCCGAGCGCGTTATGCATCGGTTGTCCAGCAGTGTGCTGGTGATTTCTCCAGAGCGCTCCCAAGGCTGAAGCACAAGGCCC > 2:1305722/1‑92 TCGGCAGTACTGCCGAGCGCGTTATGCATCGGTTGTCCAGCAGTGTGCTGGTGATTTCTCCAGAGCGCTCCCAAGGCTGAAGCACAAGGCCC < 1:1305722/92‑1 GCATCGGTTGTCCAGCAGTGTGCTGGTGATTTCTCCAGAGCGCTCCCAAGGCTGAAGCAC > 2:1974194/1‑60 GCATCGGTTGTCCAGCAGTGTGCTGGTGATTTCTCCAGAGCGCTCCCAAGGCTGAAGCAC < 1:1974194/60‑1 ATTTCTCCAGAGCGCTCCCAAGGCTGAAGCACAAGGCCCTTGCGGGCCTTG < 1:524269/51‑1 ATTTCTCCAGAGCGCTCCCAAGGCTGAAGCACAAGGCCCTTGCGGGCCTTG > 2:524269/1‑51 TCCCAAGGCTGAAGCACAAGGCCCGCAAGGGCCTTGTGCTTCAGCCTTGGGAGCGCTCTGGAGAAATCACCAGCACACTGCTGGACAACCGATGCATAAC > 1:1913941/1‑100 TCCCAAGGCTGAAGCACAAGGCCCGCAAGGGCCTTGTGCTTCAGCCTTGGGAGCGCTCTGGAGAAATCACCAGCACACTGCTGGACAACCGATGCATAAC < 2:1913941/100‑1 GAAGCACAAGGCCCGCAAGGGCCTTGTGCTTCAGCCTTGGGAGCGCCCTGGAGAAATCACCAGCACACTGCTGGACAACCGATGCATAACGCGCTCGGCAGTACTGCCGATGAACCAGCCGATGCCACGGTGGTGATAACTGCCCATGAC > 2:1265325/1‑150 AAGGCCCTTGCGGGCCTTGTGCTTCAGCCTTGGGAGCGCTCTGGAGAAATCACCAGCACACTGCTGGACAACCGATGCATAACGCGCTC < 1:464171/89‑1 AAGGCCCTTGCGGGCCTTGTGCTTCAGCCTTGGGAGCGCTCTGGAGAAATCACCAGCACACTGCTGGACAACCGATGCATAACGCGCTC > 2:464171/1‑89 GGATAACAATGATATCGACGTACTGGTCATGGGCAGTTATCACCACCGTGGCATCGGCTGGTTCATCGGCAGTACTGCCGAGCGCGTTATGCATCGGTTGTCCAGCAGTGTGCTGGTGATTTCTCCAGAGCGCTCCCAAGGCTGAAGCACAAGGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3723569‑3723725‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acaaggcccTTGCGGGCCTTGTGCTTCAGCCTTGGGAGCGCTCTGGAGAAATCACCAGCACACTGCTGGACAACCGATGCATAACGCGCTCGGCAGTACTGCCGATGAACCAGCCGATGCCACGGTGGTGATAACTGCCCATGAC < NC_002947/3723729‑3723594 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |