| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3758150 = | 113 (1.280) | 8 (0.100) | 6/230 | NT | 7.2% | coding (420/1002 nt) | hemBB | porphobilinogen synthase |
| ? | NC_002947 | 3758188 = | 100 (1.210) | coding (458/1002 nt) | hemBB | porphobilinogen synthase | |||||
GCGCGGACCTGAGCGCGCCGATGCGCCCGTCCATCATGTCCGAAGGTGCCAAGGTGTCGATGCCGGCCTGGGCCTGGACCACAGCCTGGGCCGCCAGTACCTGCAAGGTCTCGTCATTGGCCACGCGGCCTTGGCGCAGCACGCCGTCGTGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3758304‑3758150‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtggccaATGACGAGACCTTGCAGGTACTGGCGGCCCAGGCTGTGGTCCAGGCC‑CAGGCCGGCATCGACACCTTGGCACCTTCGGACATGATGGACGGGCGCATCGGCGCGCTCAGGTCCGCGCTGGACCTGGCCGGGTTCAGCGATGTGCGTCTG > NC_002947/3758188‑3758336 GCGCGGACCTGAGCGCGCCGATGCGCCCGTCCATCATGTCCGAAGGTGCCAAGGTGTCGATGCCGGCCTGGGCCTGGACCACAGCCTGGGCCGCCAGTACCTGCAAGGTCTCGTCATTGGCCACGTGTCCTTGGCGCAGCACGCCGTCGT < 1:2130636/150‑1 GCGGACCTGAGCGCGCCGATGCGCCCGTCCATCATGTCCGAAGGTGCCAAGGTGTCGATGCCGGCCTGGGCCTGGACCACAGCCTGGGCCGCCAGTACCTGCAAGGTCTCGTCATTGGCCACGCGGCCTTGGCGCAGCACGCCGTCGTGG < 1:287756/150‑1 GCGGACCTGAGCGCGCCGATGCGCCCGTCCATCATGTCCGAAGGTGCCAAGGTGTCGATGCCGGCCTGGGCCTGGACCACAGCCTGGGCCGCCAGTACCTGCAAGGTCTCGTCATTGGCCACGCGGCCTTGGCGCAGCACGCCGTCGTGG < 2:1435021/150‑1 GCGGACCTGAGCGCGCCGATGCGCCCGTCCATCATGTCCGAAGGTGCCAAGGTGTCGATGCCGGCCTGGGCCTGGACCACAGCCTGGGCCGCCAGTACCTGCAAGGTCTCGTCATTGGCCACGCGGCCTTGGCGCAGCACGCCGTCGTGG > 2:1137914/1‑150 CGGACCTGAGCGCGCCGATGCGCCCGTCCATCATGTCCGAAGGTGCCAAGGTGTCGATGCCGGCCTGGGCCTGGACCACAGCCTGGGCCGCCAGTACCTGCAAGGTCTCGTCATTGGCCACGCGGCCTTGGCGCAGCACGCCGTCGTGGC > 1:75361/1‑150 CTGAGCGCGCCGATGCGCCCGTCCATCATGTCCGAAGGTGCCAAGGTGTCGATGCCGGCCTGGGCCTGGACCACAGCCTGGGCCGCCAGTACCTGCAAGGTCTCGTCATTGGCCACGCGGCCTTGGCGCAGCACGCCGTCGTGGCCA < 1:1406974/147‑1 CTGAGCGCGCCGATGCGCCCGTCCATCATGTCCGAAGGTGCCAAGGTGTCGATGCCGGCCTGGGCCTGGACCACAGCCTGGGCCGCCAGTACCTGCAAGGTCTCGTCATTGGCCACGCGGCCTTGGCGCAGCACGCCGTCGTGGCCA > 2:1406974/1‑147 GTCATTGGCCACGCGGCCTTGGCGCAGCACGCCGTCGTGGCC‑ATGACGAGACCTTGCAGGTACTGGCGGCCCAGGCTGTGGTCCAGGCC‑CAGGCCGGCATCGACACCTTGGCACCTTCGGACATGATGGACGGGCGCATCGGCGCGCTCA > 1:1920085/1‑150 ATTGGCCACGCGGCCTTGGCGCAGCACGCCGTCGTGGCCAATGACGAGACCTTGCAGGTACTGGCGGCCCAGGCTGTGGTCCAGGCC‑CAGGCCGGCATCGACACCTTGGCACCTTCGGACATGATGGACGGGCGCATCGGCGCGCTCAGG > 2:1935654/1‑150 CCACGCGGCCTTGGCGCAGCACGCCGTCGTGGCCAATGACGAGACCTTGCAGGTACTGGCGGCCCAGGCTGTGGTCCAGGCC‑CAGGCCGGCATCGACACCTTGGCACCTTCGGACATGATGGACGGGCGCAT < 1:2157348/132‑1 CCACGCGGCCTTGGCGCAGCACGCCGTCGTGGCCAATGACGAGACCTTGCAGGTACTGGCGGCCCAGGCTGTGGTCCAGGCC‑CAGGCCGGCATCGACACCTTGGCACCTTCGGACATGATGGACGGGCGCAT > 2:2157348/1‑132 ACGCGGCCTTGGCGCAGCACGCCGTCGTGGCCAATGACGAGACCTTGCAGGTACTGGCGGCCCAGGCTGTGGTCCAGGCC‑CAGGCCGGCATCGACACCTTGGCACCTTCGGACATGATGGACGGGCGCATCGGCGCGCTCAGGTCCGCGC > 2:1908266/1‑150 ACGCGGCCTTGGCGCAGCACGCCGTCGTGGCCAATGACGAGACCTTGCAGGTACTGGCGGCCCAGGCTGTGGTCCAG < 1:1311211/77‑1 ACGCGGCCTTGGCGCAGCACGCCGTCGTGGCCAATGACGAGACCTTGCAGGTACTGGCGGCCCAGGCTGTGGTCCAG > 2:1311211/1‑77 ACGCGGCCTTGGCGCAGCACGCCGTCGTGGCCAATGACGAGACCTTGCAGGTACTGGCGGAACAGGCTATGGTCCAGGCC‑CAAGCCGTCATCGACACCTTGGCACCTTCGGACATGATGGACTTGCGCATCTGCGCGCTCATGTCCGCGg > 2:2308217/1‑149 GCCAATGACGAGACCTTGCAGGTACTGGCGGCCCAGGCTGTGGTCCAGGCC‑CAGGCCGGCATCGACACCTTGGCACCTTCGGACATGATGGACGGGCGCATCGGCGCGCTCAGGTCCGCGCTGGACCTGGCCGGGTTCAGCGATGTGCGT < 2:2130636/150‑1 CCAATGACGAGACCTTGCAGGTACTGGCGGCCCAGGCTGTGGTCCAGGCC‑CAGGCCGGCATCGACACCTTGGCACCTTCGGACATGATGGACGGGCGCATCGGCGCGCTCAGGTCCGCGCTGGACCTGGCCGGGTTCAGCGATGTGCGTC < 1:776808/150‑1 CCAATGACGAGACCTTGCAGGTACTGGCGGCCCAGGCTGTGGTCCAGGCC‑CAGGCCGGCATCGACACCTTGGCACCTTCGGACATGATGGACGGGCGCATCGGCGCGCTCAGGTCCGCGCTGGACCT < 2:1242378/127‑1 CCAATGACGAGACCTTGCAGGTACTGGCGGCCCAGGCTGTGGTCCAGGCC‑CAGGCCGGCATCGACACCTTGGCACCTTCGGACATGATGGACGGGCGCATCGGCGCGCTCAGGTCCGCGCTGGACCT > 1:1242378/1‑127 CAATGACGAGACCTTGCCGGTACTGGCGGCCCAGGCTGTGGTACCGGCCGCACAGTAG‑ATCGACACCTTGGCACCTTCGGACATGATGGACGGGCGCATCGGCGCGCTCAGGTCCGCGCTGGACCTGGCCGGGTTCAGCGATGTGCGGCT > 2:593726/1‑150 CAATGACGAGACCTTGCAGGTACTGGCGGCCCAGGCTGTGGTCCAGGCC‑CAGGCCGGCATCGACACCTTGGCACCTTCGGACATGATGGACGGGCGCATCGGCGCGCTCAGGTCCGCGCTGGACCTGGCCAGGTTCAGCGATGTGCGTCT > 2:1587107/1‑150 AATGACGAGACCTTGCAGGTACTGGCGGCACAGGCTGTGGTCCAGGCC‑CAGGCCGGCATCGACACCTTGGCACCTTCGGACATGATGGACGGGCGCATCGGCGCGCTCAGGTCCGCGCTGGACCTGGCCGGGTTCAGCGATGTGCGTCTG > 1:659628/1‑150 GCGCGGACCTGAGCGCGCCGATGCGCCCGTCCATCATGTCCGAAGGTGCCAAGGTGTCGATGCCGGCCTGGGCCTGGACCACAGCCTGGGCCGCCAGTACCTGCAAGGTCTCGTCATTGGCCACGCGGCCTTGGCGCAGCACGCCGTCGTGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3758304‑3758150‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtggccaATGACGAGACCTTGCAGGTACTGGCGGCCCAGGCTGTGGTCCAGGCC‑CAGGCCGGCATCGACACCTTGGCACCTTCGGACATGATGGACGGGCGCATCGGCGCGCTCAGGTCCGCGCTGGACCTGGCCGGGTTCAGCGATGTGCGTCTG > NC_002947/3758188‑3758336 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |