New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3844183	72 (0.810)	7 (0.080)	6/236	NT	8.7%	coding (540/1191 nt)	PP_3393	CAIB/BAIF family protein
	?	NC_002947	= 3844210	77 (0.910)					coding (513/1191 nt)	PP_3393	CAIB/BAIF family protein

CACGTCATAGATGGCCCAGGCACTGATGCGGTTCGGCATCGGCGCTGCGGCTTCACCGGTGACCACGTACTGCTGCATATGCTGGGCAGCCAGCAGCACGCAATTCTCGTACAGGGCACTTTGCACCTCACGGCCCCTGCCGGTGCTGTGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3844030‑3844183 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcCATTGGCGTGCTGGCCGCACTCAACGAGCGCCACAGCACCGGCAGGGGCCGTGAGGTGCAAAGTGCCCTGTACGAGAATTGCGTGCTGCTGGCTGCCCAGC  <  NC_002947/3844210‑3844110                                                                                                                                                                                                                                                                 CACGTCATAGATGGCCCAGGCACTGATGCGGTTCGGCATCGGCGCTGCGGCTTCACCGGTGACCACGTACTGCTGCATATGCTGGGCAGCCAGCAGCACGCAATTCTCGTACAGGGCACTTTGCACCTCACGGCCCCTGCCGGTGCTGTG                                                                                                           <  2:251706/150‑1    GTCATAGATGGCCCAGGCACTGATGCGGTTCGGCATCGGCGCTGCGGCTTCACCGGTGACCACGTACTGCTGCATATGCTGGGCAGCCAGCAGCACGCAATTCTCGTACAGGGCACTTTGCACCTCACGGCCCCTGCCGGTGCTGTGGCG                                                                                                        >  1:2163273/1‑150     TCATAGATGGCCCAGGCACTGATGCGGTTCGGCATCGGCGCTGCGGCTTCACCGGTGACCACGTACTGCTGCATATGCTGGGCAGCCAGCAGCACGCAATTCTCGTACAGGGCACTTTGCACCTCACGGCCCCTGCCGGTGCTGTGGCGC                                                                                                       >  2:1863128/1‑150                                  CGGCATCGGCGCTGCGGCTTCACCGGTGACCACGTACTGCTGCATATGCTGGGCAGCCAGCAGCACGCAATTCTCGTACAGGGCACTTTGCACCTCACGGCCCCTGCCGGTGCTGTGGCGCCATTGGCGTGCTGGCCGCACTCAACGAGC                                                                          <  2:160340/150‑1                                  CGGCATCGGCGCTGCGGCTTCACCGGTGACCACGTACTGCTGCATATGCTGGGCAGCCAGCAGCACGCAATTCTCGTACAGGGCACTTTGCACCTCACGGCCCCTGCCGGTGCTGTGGCGCCATTGGCGTGCTGGCCGCACTCAACGAGC                                                                          <  2:2387852/150‑1                                    GCATCGGCGCTGCGGCTTCACCGGTGACCACGTACTGCTGCATATGCTGGGCAGCCAGCAGCACGCAATTCTCGTACAGGGCACTTTGCACCTCACGGCCCCTGCCGGTGCTGTGGCGCCATTGGCGTGCTGGCCGCACTCAACGAGCGC                                                                        <  1:342076/150‑1                                                    TTCACCGGTGACCACGTACTGCTGCATATGCTGGGCAGCCAGCAGCACGCAATTCTCGTACAGGGCACTTTGCACCTCACGGCCCCTGCCGGTGCTGTG                                                                                                           >  1:1787365/1‑99                                                    TTCACCGGTGACCACGTACTGCTGCATATGCTGGGCAGCCAGCAGCACGCAATTCTCGTACAGGGCACTTTGCACCTCACGGCCCCTGCCGGTGCTGTG                                                                                                           <  2:1787365/99‑1                                                              ACCACGTACTGCTGCATATGCTGGGCAGCCAGCAGCACGCAATTCTCGTACAGGGCACTTTGCACCTCACGGCCCCTGCCGGTGCTGTGGCGCCATTGGCGTGCTGGCCGCACTCAACGAGCGCCAC                                                                     <  1:1513900/127‑1                                                              ACCACGTACTGCTGCATATGCTGGGCAGCCAGCAGCACGCAATTCTCGTACAGGGCACTTTGCACCTCACGGCCCCTGCCGGTGCTGTGGCGCCATTGGCGTGCTGGCCGCACTCAACGAGCGCCAC                                                                     >  2:1513900/1‑127                                                                                                    GCAATTCTCGTACAGGGCACTTTGCACCTCACGGCCCCTGCCGGTGCTGTGGCGCCATTGGCGTGCTGGCCGCACTCAACGAGCGCC                                                                       <  1:1146215/87‑1                                                                                                    GCAATTCTCGTACAGGGCACTTTGCACCTCACGGCCCCTGCCGGTGCTGTGGCGCCATTGGCGTGCTGGCCGCACTCAACGAGCGCC                                                                       >  2:1146215/1‑87                                                                                                                                                       GCGCCATTGGCGTGCTGGCCGCACTCAACGAGCGCCACAGCACCGGCAGGGGCCGTGAGGTGCAAAGTGCCCTGTACGAGAATTGCGTGCTGCTGGCTGCCCAGC  <  1:1551777/105‑1                                                                                                                                                       GCGCCATTGGCGTGCTGGCCGCACTCAACGAGCGCCACAGCACCGGCAGGGGCCGTGAGGTGCAAAGTGCCCTGTACGAGAATTGCGTGCTGCTGGCTGCCCAGC  >  2:1551777/1‑105                                                                                                                                                       GCGCCATTGGCGTGCTGGCCGCACTCAACGAGCGCCACAGCACCGGCAGGGGCCGTGAGGTGCAAA                                         <  1:2369417/66‑1                                                                                                                                                       GCGCCATTGGCGTGCTGGCCGCACTCAACGAGCGCCACAGCACCGGCAGGGGCCGTGAGGTGCAAA                                         >  2:2369417/1‑66                                                                                                                                                                                                                                                                 CACGTCATAGATGGCCCAGGCACTGATGCGGTTCGGCATCGGCGCTGCGGCTTCACCGGTGACCACGTACTGCTGCATATGCTGGGCAGCCAGCAGCACGCAATTCTCGTACAGGGCACTTTGCACCTCACGGCCCCTGCCGGTGCTGTGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3844030‑3844183 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcCATTGGCGTGCTGGCCGCACTCAACGAGCGCCACAGCACCGGCAGGGGCCGTGAGGTGCAAAGTGCCCTGTACGAGAATTGCGTGCTGCTGGCTGCCCAGC  <  NC_002947/3844210‑3844110

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.