| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4139817 | 92 (1.040) | 5 (0.060) | 4/236 | NT | 5.2% | coding (706/1041 nt) | PP_3644 | monooxygenase subunit |
| ? | NC_002947 | = 4139831 | 93 (1.100) | coding (720/1041 nt) | PP_3644 | monooxygenase subunit | |||||
CAATGGTTGCAATGTCATGGTCACCCCGCTGATGAAGGGTGACGAAGAAGTGCTGGACCTGAAGAACAAGTTCCAGGCCGCCCTGGACAACAACCCGGACGTGCCGCGCCCGCAACTGATGGTGCTGCGCCACACCCACGTGCACAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4139669‑4139817‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagccTTCCGGGTCGGACGGGCTGTGCACGTGGGTGTGGCGCAGCACCATCAGTTGCGGGCGCGGCACGTCCGGGTTGTTGTCCAGGGCGGCCTGGAACTTGTTCTTCAGGTCCAGCACTTCTTCGTCACCCTTCATCAGCGGGGTGACCATGA < NC_002947/4139831‑4139683 CAATGGTTGCAATGTCATGGTCACCCCGCTGATGAAGGGTGACGAAGAAGTGCTGGACCTGAAGAACAAGTTCCAGGCCGCCCTGGACAACAACCCGGACGTGCCGCGCCCGCAACTGATGGTGCTGCGCCACACCCACGTGCACA > 1:1975800/1‑146CAATGGTTGCAATGTCATGGTCACCCCGCTGATGAAGGGTGACGAAGAAGTGCTGGACCTGAAGAACAAGTTCCAGGCCGCCCTGGACAACAACCCGGACGTGCCGCGCCCGCAACTGATGGTGCTGCGCCACACCCACGTGCACA < 2:1975800/146‑1 AATGGTTGCAATGTCATGGTCACCCCGCTGATGAAGGGTGACGAAGAAGTGCTGGACCTGAAGAACAAGTTCCAGGCCGCCCTGGACAACAACCCGGACGTGCCGCGCCCGCAACTGATGGTGCTGCGCCACACCCACGTGCACAGC < 1:1003319/147‑1 AATGGTTGCAATGTCATGGTCACCCCGCTGATGAAGGGTGACGAAGAAGTGCTGGACCTGAAGAACAAGTTCCAGGCCGCCCTGGACAACAACCCGGACGTGCCGCGCCCGCAACTGATGGTGCTGCGCCACACCCACGTGCACAGC > 2:1003319/1‑147 TGGTCACCCCGCTGATGAAGGGTGACGAAGAAGTGCTGGACCTGAAGAACAAGTTCCAGGCCGCCCTGGACAACAACCCGGACGTGCCGCGCCCGCAACTGATGGTGCTGCGCCACACCCACGTGCACAGCCTTCCGGGTCGGACGGGCT < 1:2384789/150‑1 ACCTGAAGAACAAGTTCCAGGCCGCCCTGGACAACAACCCGGACGTGCCGCGCCCGCAACTGATGGTGCTGCGCCACACCCACGTGCACA > 1:1632455/1‑90 ACCTGAAGAACAAGTTCCAGGCCGCCCTGGACAACAACCCGGACGTGCCGCGCCCGCAACTGATGGTGCTGCGCCACACCCACGTGCACA < 2:1632455/90‑1 CAACCCGGACGTGCCGCGCCCGCAACTGATGGTGCTGCGCCACACCCACGTGCACAGCCTTCCGGGTCGGACGGGCTGTGCACGTGG < 1:309204/87‑1 CAACCCGGACGTGCCGCGCCCGCAACTGATGGTGCTGCGCCACACCCACGTGCACAGCCTTCCGGGTCGGACGGGCTGTGCACGTGG > 2:309204/1‑87 CAACCCGGACGTGCCGCGCCCGCAACTGATGGTGCTGCGCCACACCCACGTGCACAGC > 1:2018371/1‑58 CAACCCGGACGTGCCGCGCCCGCAACTGATGGTGCTGCGCCACACCCACGTGCACAGC < 2:2018371/58‑1 AACCCGGACGTGCCGCGCCCGCAACTGATGGTGCTGCGCCACACCCACGTGCACAGCCTTCCGGGTCGGACGGGCT > 2:1398248/1‑76 AACCCGGACGTGCCGCGCCCGCAACTGATGGTGCTGCGACACACCCACGTGCACAGCCTTCCGGGTCGGACGGGCT < 1:1398248/76‑1 AGCCTTCCGGGTCGGACGGGCTGTGCACGTGGGTGTGGCGCAGCACCATCAGTTGCGGGCGCGGCACGTCCGGGTTGTTGTCCAGGGCGGCCTGGAACTTGTTCTTCAGGTCCAGCACTTCTTCGTCACCCTTCATCAGCGGGGTGACCA > 1:204612/1‑150 CTTCCGGGTCGGACGGGCTGTGCACGTGGGTGTGGCGCAGCACCATCAGTTGCGGGCGCGGCACGTCCGGGTTGTTGTCCAGGGCGGCCCGGAACTTGTTCTTCAGGTCCAGCACTTCTTCGTCACCCTTCATCAGCGGGGTGACCATGA < 2:1347880/150‑1 CAATGGTTGCAATGTCATGGTCACCCCGCTGATGAAGGGTGACGAAGAAGTGCTGGACCTGAAGAACAAGTTCCAGGCCGCCCTGGACAACAACCCGGACGTGCCGCGCCCGCAACTGATGGTGCTGCGCCACACCCACGTGCACAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4139669‑4139817‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagccTTCCGGGTCGGACGGGCTGTGCACGTGGGTGTGGCGCAGCACCATCAGTTGCGGGCGCGGCACGTCCGGGTTGTTGTCCAGGGCGGCCTGGAACTTGTTCTTCAGGTCCAGCACTTCTTCGTCACCCTTCATCAGCGGGGTGACCATGA < NC_002947/4139831‑4139683 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |