New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4303031 =	91 (1.030)	10 (0.120)	9/234	NT	10.2%	coding (178/207 nt)	PP_5627	hypothetical protein
	?	NC_002947	4303057 =	89 (1.060)					coding (204/207 nt)	PP_5627	hypothetical protein

CAGTCTACCTATCCTGAAACAGGAATCGGTGCTGGCTAGTATGGTGTTTTGGAAATACAACCAAAAAGCGCCACGAGTTATGGTCGTTATTTGTGAAACACCTAGTCGGCTATACCTACGCCAGTCAGCACCGG‑GCGCGCGCG‑GCGTACCGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4303184‑4303031 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggtgCTGACTGGCGTAGGTATAGCCGACTAGGTGTTTCACAAATAACGACCATAACTCGTGGCGCTTTTTGGTTGTATTTCCAAAACACCATACTAGCCAGCACCGATTCCTGTTTCAGGATAGGTAGACTGTGACCCGCGCACGCTAGTG  >  NC_002947/4303057‑4303203                                                                                                                                                                                                                                                                                                                 CAGTCTACCTATCCTGAAACAGGAATCGGTGCTGGCTAGTATGGTGTTTTGGAAATACAACCAAAAAGCGCCACGAGTTATGGTCGTTATTTGTGAAACACCTAGTCGGCTATACCTACGCCAGTCAGCACCGG‑GCGCGCGCG‑GCGTACC                                                                                                                                                         >  2:2117285/1‑150    TCTACCTATCCTGAAACAGGAATCGGTGCTGGCTAGTATGGTGTTTTGGAAATACAACCAAAAAGCGCCACGAGTTATGGTCGTTATTTGTGAAACACCTAGTCGGCTATACCTACGCCAGTCAGCACCGG‑GCGCGCGCG‑GCGTACCGGT                                                                                                                                                      <  2:2288927/150‑1                            GGTGCTGGCTAGTATGGTGTTTTGGAAATACAACCAAAAAGCGCCACGAGTTATGGTCGTTATTTGTGAAACACCTAGTCGGCTATACCTACGCCAGTCAGCACCGGTACGC‑CGCGCGCG‑CCCGGTGCTGACTGGCGTAGGTATA                                                                                                                                   <  1:1732147/145‑1                            GGTGCTGGCTAGTATGGTGTTTTGGAAATACAACCAAAAAGCGCCACGAGTTATGGTCGTTATTTGTGAAACACCTAGTCGGCTATACCTACGCCAGTCAGCACCGGTACGC‑CGCGCGCG‑CCCGGTGCTGACTGGCGTAGGTATA                                                                                                                                   >  2:1732147/1‑145                                                                                                                                 CACCGG‑GCGCGCGCG‑GCGTACCGGTGCTGACTGGCGTAGGTATAGCCGACTAGGTGTTTCACAAATAACGACCATAACTCGTGGCGCTTTTTGGTTGTATTTCCAAAACACCATACTAGCCAGCACCGATTCCT                                         <  1:1517110/134‑1                                                                                                                                 CACCGG‑GCGCGCGCG‑GCGTACCGGTGCTGACTGGCGTAGGTATAGCCGACTAGGTGTTTCACAAATAACGACCATAACTCGTGGCGCTTTTTGGTTGTATTTCCAAAACACCATACTAGCCAGCACCGATTCCT                                         >  2:1517110/1‑134                                                                                                                                  ACCGG‑GCGCGCGCG‑GCGTACCGGTGCTGACTGGCGTAGGTATAGCCGACTAGGTGTTTCACAAATAACGACCATAACTCGTGGCGCTTTTTGGTTGTATTTCCAAAACACCATACTAGCCAGCACCGATTCCTGTTTCAGGATAGGTAGA                        >  1:2106918/1‑150                                                                                                                                  ACCGG‑GCGCGCGCG‑GCGTACCGGTGCTGACTGGCGTAGGTATAGCCGACTAGGTGTTTCACAAATAAC                                                                                                          <  1:1643780/68‑1                                                                                                                                  ACCGG‑GCGCGCGCG‑GCGTACCGGTGCTGACTGGCGTAGGTATAGCCGACTAGGTGTTTCACAAATAAC                                                                                                          >  2:1643780/1‑68                                                                                                                                   CCGG‑GCGCGCGCG‑GCGTACCGGTGCTGACTGGCGTAGGTATAGCCGACTAGGTGTTTCACAAATAACGACCATAACTCGTGGCGCTTTTTGGTTGTATTTCCAAAACACCATACTAGCCAGCACCGATTCCTGTTTCAGGATAGGTAGAa                       >  2:373349/1‑149                                                                                                                                              GCG‑GCGTACCGGTGCTGACTGGCGTAGGTATAGCCGACTAGGTGTTTCACAAATAACGACCATAACTCGTGGCGCTTTTTGGTTGTA                                                                            <  1:1167516/87‑1                                                                                                                                              GCG‑GCGTACCGGTGCTGACTGGCGTAGGTATAGCCGACTAGGTGTTTCACAAATAACGACCATAACTCGTGGCGCTTTTTGGTTGTA                                                                            >  2:1167516/1‑87                                                                                                                                                       CCGGTGCTGACTGGCGTAGGTATAGCCGACTAGGTGTTTCACAAATAACGACCATAACTCGTGGCGCTTTTTGGTTGTATTTCCAAAACACCATACTA                                                         >  2:954282/1‑98                                                                                                                                                       CCGGTGCTGACTGGCGTAGGTATAGCCGACTAGGTGTTTCACAAATAACGACCATAACTCGTGGCGCTTTTTGGTTGTATTTCCAAAACACCATACTA                                                         <  1:954282/98‑1                                                                                                                                                        CGGTGCTGACTGGCGTAGGTATAGCCGACTAGGTGTTTCACAAATAACGACCATAACTCGTGGCGCTTTTTGGTTGTATTTCCAAAACACCATACTAGCCAGCACCGATTCCTGTTTCAGGATAGGTAGACTGTGACCCGCGCACGCTAG    >  1:1390404/1‑150                                                                                                                                                         GGTGCTGACTGGCGTAGGTATAGCCGACTAGGTGTTTCACAAATAACGACCATAACTCGTGGCGCTTTTTGGTTGTATTTCCACAACACCATACTAGCCAGCACCCATTCATGTTTCAGGATAGGTAGACTGTGTCGCGCGCACGCTAGT   <  2:661614/150‑1                                                                                                                                                          GTGCTGACTGGCGTAGGTATAGCCGACTAGGTGTTTCACAAATAACGACCATAACTCGTGGCGCTTTTTGGTTGTATTTCCAAAACACCATACTAGCCAGCACCGATTCCTGTTTCAGGATAGGTAGACTGTGACCCGCGCACGCTAGTG  <  1:373349/150‑1                                                                                                                                                                                                                                                                                                                 CAGTCTACCTATCCTGAAACAGGAATCGGTGCTGGCTAGTATGGTGTTTTGGAAATACAACCAAAAAGCGCCACGAGTTATGGTCGTTATTTGTGAAACACCTAGTCGGCTATACCTACGCCAGTCAGCACCGG‑GCGCGCGCG‑GCGTACCGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4303184‑4303031 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggtgCTGACTGGCGTAGGTATAGCCGACTAGGTGTTTCACAAATAACGACCATAACTCGTGGCGCTTTTTGGTTGTATTTCCAAAACACCATACTAGCCAGCACCGATTCCTGTTTCAGGATAGGTAGACTGTGACCCGCGCACGCTAGTG  >  NC_002947/4303057‑4303203

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.