New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 4303031 =91 (1.030)10 (0.120) 9/234 NT 10.2% coding (178/207 nt) PP_5627 hypothetical protein
?NC_002947 4303057 = 89 (1.060)coding (204/207 nt) PP_5627 hypothetical protein

Only 100 of 123 total aligned reads displayed.

CCGATACTGCCTTCATTCGGCAAGGCAATGCCGGCATACGCCGAGCGATATCCGAGACGCTTCAGAACCGGCAGCAGCACATCATAGAGCTGCCGAGCAATCCCGTTGCGGCGCTGTCCCTTCCGACATACACCGTCACATCTACCGCCCACCGGTACGC‑CGCGCGCGC‑CCGGTGCTGACTGGCGTAGGTATAGCCGACTAGGTGTTTCACAAATAACGACCATAACTCGTGGCGCTTTTTGGTTGTATTTCCAAAACACCATACTAGCCAGCACCGATTCCTGTTTCAGGATAGGTA  >  NC_002947/4302882‑4303179
                                                                                                                                                     |                                                                                                                                                      
ccGATACTGCCTTCATTCGGCAAGGCAATGCCGGCATACGCCGAGCGATATCCGAGACGCTTCAGAACCGGCAGCCGAACATCATAGAGCTGCCGAGCAATCCCGTTGCGGCGCTGTCCCTTCCGACATACACCGTCACATCTACCGccc                                                                                                                                                        <  1:1373019/150‑1 (MQ=255)
  cactagcgtgcgcgggtcacagtctacctatcctgaaacaggaatcggtgctggctagtatggtgttttggaaatacaaccaaaaagcgccacgagttatggtcgttatttgtgaaacacctagtcggctatacctacgccagtcagCAc                                                                                                                                                      <  1:373349‑M1/3‑1 (MQ=255)
    tACTGCCTTCATTCGGCAAGGCAATGCCGGCATACGCCGAGCGATATCCGAGACGCTTCAGAACCGGCAGCAGCACATCATAGAGCTGCCGAGCAATCCCGTTGCGGCGCTGTCCCTTCCGACATACACCGTCACATCTACCGCCCACCg                                                                                                                                                    <  1:2002442/150‑1 (MQ=255)
    tACTGCCTTCATTCGGCAAGGCAATGCCGGCATACGCCGAGCGATATCCGAGACGCTTCAGAACCGGCAGCAGCACATCATAGAGCTGCCGAGCAATCCCGTTGCGGCGCTGTCCCTTCCGACATACACCGTCACATCTACCGCCCACCg                                                                                                                                                    <  1:1658536/150‑1 (MQ=255)
    ctagcgtgcgcgggtcacagtctacctatcctgaaacaggaatcggtgctggctagtatggtgttttggaaatacaaccaaaaagcgccacgagttatggtcgttatttgtgaaacacctagtcggctatacctacgccagtcagCACCg                                                                                                                                                    >  1:1390404‑M1/146‑150 (MQ=255)
          cTTCATTCGGCAAGGCAATGCCGGCATACGCCGAGCGATATCCGAGACGCTTCAGAACCGGCAGCAGCACATCATAGAGCTGCCGAGCAATCCCGTTGCGGCGCTGTCCCTTCCGACATACACCGTCACATCTACCGCCCACCGGTAcgc                                                                                                                                              <  1:1347221/150‑1 (MQ=255)
           ttCATTCGGCAAGGCAATGCCGGCATACGCCGAGCGATATCCGAGACGCTTCAGAACCGGCAGCAGCACATCATAGAGCTGCCGAGCAATCCCGTTGCGGCGCTGTCCCTTCCGACATACACCGTCACATCTACCGCCCAc                                                                                                                                                      <  1:269597/141‑1 (MQ=255)
           ttCATTCGGCAAGGCAATGCCGGCATACGCCGAGCGATATCCGAGACGCTTCAGAACCGGCAGCAGCACATCATAGAGCTGCCGAGCAATCCCGTTGCGGCGCTGTCCCTTCCGACATACACCGTCACATCTACCGCCCAc                                                                                                                                                      >  2:269597/1‑141 (MQ=255)
               ttCGGCAAGGCAATGCCGGCATACGCCGAGCGATATCCGAGACGCTTCAGAACCGGCAGCAGCACCTCATAGAGCTGCCGAGCAATCCCGTTGCGGCGCTGTCCCTTCCGACATACACCGTCACATCTACCGCCCACCGGTACGC‑cgcgc                                                                                                                                        <  1:477070/150‑1 (MQ=255)
                    caaggcaaTGCCGGCATACGCCGAGCGATATCCGAGACGCTTCAGAACCGGCAGCAGCACATCATAGAGCTGCCGAGCAATCCCGTTGCGGCGCTGTCCCTTCCGACATACACCGTCACATCTACCGCCCACCGGTACGC‑CGCGCGCGc‑c                                                                                                                                  >  2:1011582/1‑150 (MQ=255)
                     aaggcaaTGCCGGCATACGCCGAGCGATATCCGAGACGCTTCAGAACCGGCAGCAGCACATCATAGAGCTGCCGAGCAATCCCGTTGCGGCGCTGTCCCTTCCGACATACACCGTCACATCTACCGCCCACCGGTACGC‑CGCGCGCGc‑cc                                                                                                                                 <  2:8498/150‑1 (MQ=255)
                       ttctacctatcctgaaacaggaatcggtgctggctagtatggtgttttggaaatacaaccaaaaagcgccacgagttatggtcgttatttgtgaaacacctagtcggctatacctacgccagtcagCACCGGTACGC‑CGCGCGCGC‑CCgg                                                                                                                               >  2:373349‑M1/127‑150 (MQ=255)
                        tctacctatcctgaaacaggaatcggtgctggctagtatggtgttttggaaatacaaccaaaaagcgccacgagttatggtcgttatttgtgaaacacctagtcggctatacctacgccagtcagCACCGGTACGC‑CGCGCGCGC‑CCGGt                                                                                                                              >  1:2106918‑M1/126‑150 (MQ=255)
                          aaTGCGGGCATACGCCGAGCGATATCCGAGACGCTTCAGAACCGGCAGCAGCACATCATAGAGCTGCCGAGCAATCCCGTTGCGGCGCTGTCCCTTCCGACATACACCGTCACCTCTACCGCCCACCGGTACGC‑CGCGCGCGC‑CCGGTGc                                                                                                                            >  1:2052499/1‑150 (MQ=255)
                          aaTGCCTGCATACGCCGAGCGATATCCGAGACGCTTCAGAACCGGCAGCAGCACATCATAGAGCTGCCGAGCAATCCCGTTGCGGCGCTGTCCCTTCCGACATACACCGTCACATCTACCGCCCACCGGTACGC‑CGCGCGCGC‑CCGGTgg                                                                                                                            <  2:107633/150‑2 (MQ=255)
                          aaTGCCGGCATACGCCGAGCGATATCCGAGACGCTTCAGAACCGGCAGCAGCACATCATAGAGCTGCCGAGCAATCCCGTTGCGGCGCTGTCCCTTCCGACATACACCGTCACATCTACCGCCCACCGGTACGC‑CGCGCGCGC‑CCGGTGc                                                                                                                            >  2:474168/1‑150 (MQ=255)
                           aTGCCGGCATACGCCGAGCGATATCCGAGACGCTTCAGAACCGGCAGCAGCACATCATAGAGCTGCCGAGCAATCCCGTTGCGGCGCTGTCCCTTCCGACATACACCGTCACATCTACCGCCCACCGGTACGC‑CGCGCGCGC‑CCGGTGCt                                                                                                                           <  2:1420369/150‑1 (MQ=255)
                           aTGCCGGCATACGCCGAGCGATATCCGAGACGCTTCAGAACCGGCAGCAGCACATCATAGAGCTGCCGAGCAATCCCGTTGCGGCGCTGTCCCTTCCGACATACACCGTCACATCTACCGCCCACCGGTACGC‑CGCGCGCGC‑CCGGTGCt                                                                                                                           <  2:1359910/150‑1 (MQ=255)
                               aggCATACGCCGAGCGATATCCGAGACGCTTCAGAACCGGCAGCAGCACAGCATAGAGCTGCCGAGCAATCCCGTTGCGGCGCTGTCCCTTCCGACATACACCGTCACATCTACCGCCCACCGGTACGC‑CGCGCGCGC‑CCGGTGCTGACt                                                                                                                       >  1:952186/2‑150 (MQ=255)
                                 gCATACGCCGAGCGATATCCGAGACGCTTCAGAACCGGCAGCAGCACATCATAGAGCTGCCGAGCAATCCCGTTGCGGCGCTGTCCCTTCCGACATACACCGTCACATCTACCGCCCACCGGTACGC‑CGCGCGCGC‑CCGGTGCTGACTgg                                                                                                                     >  1:2013422/1‑150 (MQ=255)
                                  cATACGCCGAGCGATATCCGAGACGCTTCAGAACCGGCAGCAGCACATCATAGAGCTGCCGAGCAATCCCGTTGCGGCGCTGTCCCTTCCGACATACACCGTCACATCTACCGCCCACCGGTACGC‑CGCGCGCGC‑CCGGTGCTGACTGGc                                                                                                                    <  2:2052499/150‑1 (MQ=255)
                                     aCGCCGAGCGATATCCGAGACGCTTCAGAACCGGCAGCAGCACATCATAGAGCTGCCGAGCAATCCCGTTGCGGCGCTGTCCCTTCCGACATACACCGTCACATCTACCGCCCACCGGTACGC‑CGCGCGCGC‑CCGGTGCTGACTGGCGTa                                                                                                                 <  1:1523642/150‑1 (MQ=255)
                                       gCCGAGCGATATCCGAGACGCTTCAGAACCGGCAGCAGCACATCATAGAGCTGCCGAGCAATCCCGTTGCGGCGCTGTCCCTTCCGACATACACCGTCACATCTACCGCCCACCGGTACGC‑CGCGCGCGC‑CCGGTGCTGAGTggagatcg                                                                                                               >  1:1638157/1‑144 (MQ=255)
                                       gCCGAGCGATATCCGAGACGCTTCAGAACCGGCAGCAGCACATCATAGAGCTGCCGAGCAATCCCGTTGCGGCGCTGTCCCTTCCGACATACACCGTCACATCTACCGCCCACCGGTACGC‑CGCGCGCGC‑CCGGTGCTGACTGGCGTAgg                                                                                                               <  1:1490375/150‑1 (MQ=255)
                                       gCCGAGCGATATCCGAGACACTTCAGAACCGGCAGCAGCACATCATAGAGCTGCCGAGCAATCCCGTTGCGGCGCTGTCCCTTCCGACATACACCGTCACATCTACCGCCCACCGGTACGC‑CGCGCGCGC‑CCGGTGCTGACTGGCGTAgg                                                                                                               >  2:370279/1‑150 (MQ=255)
                                         aggaatcggtgctggctagtatggtgttttggaaatacaaccaaaaagcgccacgagttatggtcgttatttgtgaaacacctagtcggctatacctacgccagtcagCACCGGTACGC‑CGCGCGCGC‑CCGGTg                                                                                                                             <  1:1517110‑M1/26‑1 (MQ=255)
                                         aggaatcggtgctggctagtatggtgttttggaaatacaaccaaaaagcgccacgagttatggtcgttatttgtgaaacacctagtcggctatacctacgccagtcagCACCGGTACGC‑CGCGCGCGC‑CCGGTg                                                                                                                             >  2:1517110‑M1/109‑134 (MQ=255)
                                          gAGCGATATCCGAGACGCTTCAGAACCGGCAGCAGCACAAATGTGAGCTGCCGAGCAATCCCGTTGCGGCGCTGTCCCTTCCGACATACACCGTCACATCTACCGCCCACCGGTACGC‑CGCGCGCGC‑CCGGTGCTGACTGGCGTAGGtat                                                                                                            <  1:1833247/150‑1 (MQ=21)
                                            gCGATATCCGAGACGCTTCAGAACCGGCAGCAGCACATCATAGAGCTGCCGAGCAATCCCGTTGCGGCGCTGTCCCTTCCGACATACACCGTCACATCTACCGCCCACCGGTACGC‑CGCGCGCGC‑CCGGTGCTGACTGGCGTAGGTATAg                                                                                                          <  2:2337054/150‑1 (MQ=255)
                                               atatCCGAGACGCTTCAGAACCGGCAGCAGCACATCATAGAGCTGCCGAGCAATCCCGTTGCGGCGCTGTCCCTTCCGACATACACCGTCACATCTACCGCCCACCGGTACGC‑CGCGCGCGC‑CCGGTGCTGACt                                                                                                                       <  1:1905869/134‑1 (MQ=255)
                                               atatCCGAGACGCTTCAGAACCGGCAGCAGCACATCATAGAGCTGCCGAGCAATCCCGTTGCGGCGCTGTCCCTTCCGACATACACCGTCACATCTACCGCCCACCGGTACGC‑CGCGCGCGC‑CCGGTGCTGACt                                                                                                                       >  2:1905869/1‑134 (MQ=255)
                                                 atCCGAGACGCTTCAGAACCGGCAGCAGCACATCATAGAGCTGCCGAGCAATCCCGTTGCGGCGCTGTCCCTTCCGACATACACCGTCACATCTACCGCCCACCGGTACGC‑CGCGCGCGC‑CCGGTGCTGACTGGCGTAGGTATAGCCGAc                                                                                                     >  2:2408785/1‑150 (MQ=255)
                                                  tCCGAGACGCTTCAGAACCGGCAGCAGCACATCATAGAGCTGCCGAGCAATCCCGTTGCGGCGCTGTCCCTTCCGACATACACCGTCACATCTACCGCCCACCGGTACGC‑CGCGCGCGC‑CCGGTGCTGACTGGCGTa                                                                                                                 >  2:715810/1‑137 (MQ=255)
                                                  tCCGAGACGCTTCAGAACCGGCAGCAGCACATCATAGAGCTGCCGAGCAATCCCGTTGCGGCGCTGTCCCTTCCGACATACACCGTCACATCTACCGCCCACCGGTACGC‑CGCGCGCGC‑CCGGTGCTGACTGGCGTa                                                                                                                 <  1:715810/137‑1 (MQ=255)
                                                    cGAGACGCTTCAGAACCGGCAGCAGCACATCATAGAGCTGCCGAGCAATCCCGTTGCGGCGCTGTCCCTTCCGACATACACCGTCACATCTACCGCCCACCGGTACGC‑CGCGCGCGC‑CCGGTGCTGACTGGCGTAGGTATAGCCGACTAg                                                                                                  >  2:1351457/1‑150 (MQ=255)
                                                    cGAGACGCTTCAGAACCGGCAGCAGCACATCATAGAGCTGCCGAGCAATCCCGTTGCGGCGCTGTCCCTTCCGACATACACCGTCACATCTACCGCCCACCGGTACGC‑CGCGCGCGC‑CCGGTGCTGACTGGCGTAGGTATAGCCGACTAg                                                                                                  >  2:108970/1‑150 (MQ=255)
                                                         tagtatggtgttttggaaatacaaccaaaaagcgccacgagttatggtcgttatttgtgaaacacctagtcggctatacctacgccagtcagCACCgg                                                                                                                                                   <  1:954282‑M1/6‑1 (MQ=255)
                                                         tagtatggtgttttggaaatacaaccaaaaagcgccacgagttatggtcgttatttgtgaaacacctagtcggctatacctacgccagtcagCACCgg                                                                                                                                                   >  2:954282‑M1/93‑98 (MQ=255)
                                                            ttCAGAACCGGCAGCAGCACATCATAGAGCTGCCGAGCAATCCCGTTGCGGCGCTGTCCCTTCCGACATACACCGTCACATCTACCGCCCACCGGTACGC‑CGCGCGCGC‑CCGGTGCTGACTGGCGTAGGTATAGCCGACTAGGTGTTTca                                                                                          >  1:316673/1‑150 (MQ=255)
                                                            ttCAGAACCGGCAGCAGCACATCATAGAGCTGCCGAGCAATCCCGTTGCGGCGCTGTCCCTTCCGACATACACCGTCACATCTACCGCCCACCGGTACGC‑CGCGCGCGC‑CCGGTGCTGACTGGCGTAGGTATAGCCGACTAGGTGTTTca                                                                                          >  1:668959/1‑150 (MQ=255)
                                                                 aaCCGGCAGCAGCACATCATAGAGCTGCCGAGCAATCCCGTTGCGGCGCTGTCCCTTCCGACATACACCGTCACATCTACCGCCCACCGGTACGC‑CGCGCGCGC‑CCGGTGc                                                                                                                            <  2:76748/111‑1 (MQ=255)
                                                                   ccGGCAGCAGCACATCATAGAGCTGCCGAGCAATCCCGTTGCGGCGCTGTCCCTTCCGACATACACCGTCACATCTACCGCCCACCGGTACGC‑CGCGCGCGC‑CCGGTGCTGACTGGCGTAGGTATAGCCGACTAGGTGTTTCACAAATaa                                                                                   >  1:978905/1‑150 (MQ=255)
                                                                   ccGGCAGCAGCACATCATAGAGCTGCCGAGCAATCCCGTTGCGGCGCTGTCCCTTCCGACATACACCGTCACATCTACCGCCCACCGGTACGC‑CGCGCGCGC‑CCGGTGAACTCCGGCGTAGGTATAGCCGACTAGGTGTTTCACAAATaa                                                                                   >  1:1932712/1‑150 (MQ=25)
                                                                   ccGGCAGCAGCACATCATAGAGCTGCCGAGCAATCCCGTTGCGGCGCTGTCCCTTCCGACATACACCGTCACATCTACCGCCCACCGGTACGC‑CGCGCGAGA‑GCGGTGCTGACTGGCGTAGGTATAGCCGACTAGGTGTTTCACAAATaa                                                                                   >  1:2069897/1‑150 (MQ=255)
                                                                      gcagcagcaCATCATAGAGCTGCCGAGCAATCCCGTTGCGGCGCTGTCCCTTCCGACATACACCGTCACATCTACCGCCCACCGGTACGC‑CGCGCGCGC‑CCGGTGCTGACTGGCGTAGGTATAGCCGACTAGGTGTTTCACAAATAACGa                                                                                <  2:952186/150‑1 (MQ=255)
                                                                      gcagcagcaCATCATAGAGCTGCCGAGCAATCCCGTTGCGGCGCTGTCCCTTCCGACATACACCGTCACATCTACCGCCCACCGGTACGC‑CGCGCGCGC‑CCGGTGCTGACTGGCGTAGGTATAGCCGACTAGGTGTTTCACAAATAACGa                                                                                <  2:1840027/150‑1 (MQ=255)
                                                                       cagcagcaCATCATAGAGCTGCCGAGCAATCCCGTTGCGGCGCTGTCCCTTCCGACATACACCGTCACATCTACCGCCCACCGGTACGC‑CGCGCGCGC‑CCGGTGCTGACTGGCGTAGGTATAGCCGACTAGGTGTTTCACAAATAACGAc                                                                               <  2:1602586/150‑1 (MQ=255)
                                                                            tacaaccaaaaagcgccacgagttatggtcgttatttgtgaaacacctagtcggctatacctacgccagtcagCACCGGTAcgc‑cgc                                                                                                                                          >  2:1167516‑M1/74‑87 (MQ=255)
                                                                            tacaaccaaaaagcgccacgagttatggtcgttatttgtgaaacacctagtcggctatacctacgccagtcagCACCGGTAcgc‑cgc                                                                                                                                          <  1:1167516‑M1/14‑1 (MQ=255)
                                                                                  catAGAGCTGCCGAGCAATCCCGTTGCGGCGCTGTCCCTTCCGACATACACCGTCACATCTACCGCCCACCGGTACGC‑CGCGCGCGC‑CCGGTGCTGACTGGCGTAGGTATAGCCGACTAGGTGTTTCACAAATAACGACCATAACTCGTg                                                                    <  2:156344/150‑1 (MQ=255)
                                                                                   atAGAGCTGCCGAGCAATCCCGTTGCGGCGCTGTCCCTTCCGACATACACCGTCACATCTACCGCCCAcc                                                                                                                                                     >  2:1914800/1‑70 (MQ=255)
                                                                                   atAGAGCTGCCGAGCAATCCCGTTGCGGCGCTGTCCCTTCCGACATACACCGTCACATCTACCGCCCAcc                                                                                                                                                     >  2:1914892/1‑70 (MQ=255)
                                                                                   atAGAGCTGCCGAGCAATCCCGTTGCGGCGCTGTCCCTTCCGACATACACCGTCACATCTACCGCCCAcc                                                                                                                                                     <  1:1914892/70‑1 (MQ=255)
                                                                                    tAGAGCTGCCGAGCAATCCCGTTGCGGCGCTGTCCCTTCCGACATACACCGTCACATCTACCGCCCACCGGTACGC‑CGCGCGCGC‑CCGGTGCTGACTGGCGTAGGTATAGCCGACTAGGTGTTTCACAAATAACGACCATAACTCGTGgc                                                                  <  2:548749/150‑1 (MQ=255)
                                                                                          tGCCGAGCAATCCCGTTGCGGCGCTGTCCCTTCCGACATACACCGTCACATCTACCGCCCACCGGTACGC‑CGCGCGCGC‑CCGGTGCTGACTGGCGTAGGTATAGCCGACTAGGTGTTTCACAAATAACGACCATAACTc                                                                       <  2:527869/139‑1 (MQ=255)
                                                                                          tGCCGAGCAATCCCGTTGCGGCGCTGTCCCTTCCGACATACACCGTCACATCTACCGCCCACCGGTACGC‑CGCGCGCGC‑CCGGTGCTGACTGGCGTAGGTATAGCCGACTAGGTGTTTCACAAATAACGACCATAACTc                                                                       >  1:527869/1‑139 (MQ=255)
                                                                                          tGCCGAGCAATCCCGTTGCGGCGCTGTCCCTTCCGACATACACCGTCACATCTACCGCCCACCGGTACGC‑CGCGCGCGC‑CCGGTGCTGACTGGCGTAGGTAGAGCCGACTAGGTGTTTCACAAATAACGACCATAACTCGTGGCGCtttt                                                            >  2:1615713/1‑150 (MQ=255)
                                                                                           gCCGAGCAATCCCGTTGCGGCGCTGTCCCTTCCGACATACACCGTCACATCTACCGCCCACCGGTAcgc‑c                                                                                                                                            >  2:2048973/1‑70 (MQ=255)
                                                                                           gCCGAGCAATCCCGTTGCGGCGCTGTCCCTTCCGACATACACCGTCACATCTACCGCCCACCGGTAcgc‑c                                                                                                                                            <  1:2048973/70‑1 (MQ=255)
                                                                                             cGAGCAATCCCGTTGCGGCGCTGTCCCTTCCGACATACACCGTCACATCTACCGCCCACCGGTACGC‑CGCGCGCGC‑CCGGTGCTGACTGGCGTAGGTATAGCCGACTAGGTGTTTCACAAATAACGACCATAACTCGTGGCGCTTTTTgg                                                         <  2:1461946/150‑1 (MQ=255)
                                                                                              gAGCAATCCCGTTGCGGCGCTGTCCCTTCCGACATACACCGTCACATCTACCGCCCACCGGTACGC‑CGCGCGCGC‑CCGGTGCTGACTGGCGTAGGTATAGCCGACTAGgt                                                                                                <  1:856054/110‑1 (MQ=255)
                                                                                              gAGCAATCCCGTTGCGGCGCTGTCCCTTCCGACATACACCGTCACATCTACCGCCCACCGGTACGC‑CGCGCGCGC‑CCGGTGCTGACTGGCGTAGGTATAGCCGACTAGgt                                                                                                >  2:856054/1‑110 (MQ=255)
                                                                                                   aTCCCGTTGCGGCGCTGTCCCTTCCGACATACACCGTCACATCTACCGCCCACCGGTACGC‑CGCGCGCGC‑CCGGTGCTGACTGGCGTAGGTATAGCCGACTAGGTGTTTCACAAATAACGACCATAACTCGTGGCGCTTTTTGGTTGTAt                                                   <  1:1351457/150‑1 (MQ=255)
                                                                                                     cccGTTGCGGCGCTGTCCCTTCCGACATACACCGTCACATCTACCGCCCACCGGTACGC‑CGCGCGCGC‑CCGGTGCTGACTGGCGTAGGTATAGCCGACTAGGTGTTTCACAAATAACGACCATAACTCGTGGCGCTTTTTGGTTGTAttt                                                 >  1:275981/1‑150 (MQ=255)
                                                                                                       cGTTGCGGCGCTGTCCCTTCCGACATACACCGTCACATCTACCGCCCACCGGTACGC‑CGCGCGCGC‑CCGGTGCTGACTGGCGTAGGTATAGCCGACTAGGTGTTTCACAAATAACGACCATAACTCGTGGCGCTTTTTGGTTGTATTTcc                                               >  1:1836513/1‑150 (MQ=255)
                                                                                                          gttatttgtgaaacacctagtcggctatacctacgccagtcagCACCGGTACGC‑CGCGCGCGC‑CCGGt                                                                                                                              >  2:1643780‑M1/44‑68 (MQ=255)
                                                                                                          gttatttgtgaaacacctagtcggctatacctacgccagtcagCACCGGTACGC‑CGCGCGCGC‑CCGGt                                                                                                                              <  1:1643780‑M1/25‑1 (MQ=255)
                                                                                                           gcggcgCTGTCCCTTCCGACATACACCGTCACATCTACCGCCCACCGGTACGC‑CGCGCGCGC‑CCGGTGCTGACTGGCGTAGGTATAGCCGACTAGGTGTTTCACAAATAACGACCATAACTCGTGGCGCTTTTTGGTTGTATTTCCaaaa                                           <  1:1011582/150‑1 (MQ=255)
                                                                                                            cggcgCTGTCCCTTCCGACATACACCGTCACATCTACCGCCCACCGGTACGC‑CGCGCGCGC‑CCGGTGCTGACTGGCGTAGGTATAGCCGACTAGGTGTTTCACAAATAACGACCATAACTCGTGGCGCTTTTTGGTTGTATTTCCAAAac                                          >  2:1086087/1‑150 (MQ=255)
                                                                                                                gcTGTCCCTTCCGACATACACCGTCACATCTACCGCCCACCGGTACGC‑CGCGCGCGC‑CCGGTGCTGACTGGCGTAGGTATAGCCGACTAGGTGTTTCACAAATAACGACCATAACTCGTg                                                                    >  2:1761085/1‑120 (MQ=255)
                                                                                                                gcTGTCCCTTCCGACATACACCGTCACATCTACCGCCCACCGGTACGC‑CGCGCGCGC‑CCGGTGCTGACTGGCGTAGGTATAGCCGACTAGGTGTTTCACAAATAACGACCATAACTCGTg                                                                    <  1:1761085/120‑1 (MQ=255)
                                                                                                                    tCCCTTCCGACATACACCGTCACATCTACCGCCCACCGGTACGC‑CGCGCGCGC‑CCGGTGCTGACTGGCGTAGGTATAGCCGACTAGGTGTTTCACAAATAACGACCATAACTCGTGGCGCTTTTTGGTTGTATTTCCAAAACACCATACt                                  >  1:459055/1‑150 (MQ=255)
                                                                                                                     cccTTCCGACATACACCGTCACATCTACCGCCCACCGGTACGC‑CGCGCGCGC‑CCGGTGCTGACTGGCGTAGGTATAGCCGACTAGGTGTTTCACAAATAACGACCATAACTCGGGGCGCTTTTTGGTTGTATTTCCAAAACACCATACTa                                 <  2:1894090/150‑1 (MQ=255)
                                                                                                                      ccTTCCGACATACACCGTCACATCTACCGCCCACCGGTACGC‑CGCGCGCGC‑CCGGTGCTGACTGGCGTAGGTATAGCCGACTAGGTGTTTCACAAATAACGACCATAACTCGTGGCGCTTTTTGGTTGTATTTCCAAAACACCATACTAg                                <  1:108970/150‑1 (MQ=255)
                                                                                                                      ccTTCCGACATACACCGTCACATCTACCGCCCACCGGTACGC‑CGCGCGCGC‑CCGGTGCTGACTGGCGTAGGTATAGCCGACTAGGTGTTTCACAAATAACGACCATAACTCGTGGCGCTTTTTGGTTGTATTTCCAAAACACCATACTAg                                >  2:133948/1‑150 (MQ=255)
                                                                                                                       cTTCCGACATACACCGTCACATCTACCGCCCACCGGTACGC‑CGCGCGCGC‑CCGGTGCTGACTGGCGTAGGTATAGCCGACTAGGTGTTTCACAAATAACGACCATAACTCGTGGCGCTTTTTGGTTGTATTTCCAAAACACCATACTAGc                               <  1:1130416/150‑1 (MQ=255)
                                                                                                                            gACATACACCGTCACATCTACCGCCCACCGGTACGC‑CGCGCGCGC‑CCGGTGCTGACTGGCGTAGGTATAGcc                                                                                                        <  1:688817/72‑1 (MQ=255)
                                                                                                                            gACATACACCGTCACATCTACCGCCCACCGGTACGC‑CGCGCGCGC‑CCGGTGCTGACTGGCGTAGGTATAGcc                                                                                                        >  2:688817/1‑72 (MQ=255)
                                                                                                                               aTACACCGTCACATCTACCGCCCACCGGTACGC‑CGCGCGCGC‑CCGGTGCTGACTGGCGt                                                                                                                  >  2:1724359/1‑59 (MQ=255)
                                                                                                                               aTACACCGTCACATCTACCGCCCACCGGTACGC‑CGCGCGCGC‑CCGGTGCTGACTGGCGt                                                                                                                  <  1:1724359/59‑1 (MQ=255)
                                                                                                                               aTACACCGTCACATCTACCGCCCACCGGTACGC‑CGCGCGCGC‑CCGGTGCTGACTGGCGTAGGTATAGCCGACTAGGTGTTTCACAAATAACGACCATAACTCGTGGCGCTTTTTGGTTGTATTTCCAAAACACCATACTAGCCAGCACCg                       >  1:2181264/1‑150 (MQ=255)
                                                                                                                                tACACCGTCACATCTACCGCCCACCGGTACGC‑CGCGCGCGC‑CCGGTGCTGACTGGCGTAGGTATAGCCGACTAGGTGTTTCACAAATAACGACCATAACTCGTGGCGCTTTTTGGTTGTATTTCCAAAACACCATACTAGCCAGCACCGa                      <  1:133948/150‑1 (MQ=255)
                                                                                                                                tACACCGTCACATCTACCGCACACCCGTATGC‑CGCTGGCCC‑CCGGAGCTGACTGCCGTATGTAGAGCCCAGTAGGTCTTTCACAAGTAAAGAGCATGACTCGTGGCGCTTTTTGGTTTTATTTTCAACACACCATCCTAGCCAGCACCGa                      >  2:811587/1‑150 (MQ=255)
                                                                                                                                 acacCGTCACATCTACCGCCCACCGGTACGC‑CGCGCGCGC‑CCGGTGCTGACTGGCGTAGGTATAGCCGACTAGGTGTTTCACAAATAACGACCATAACTCGTGGCGCTTTTTGGTTGTATTTCCAAAACACCATACTAGCCAGCACCGAt                     >  1:1344001/1‑150 (MQ=255)
                                                                                                                                   tatacctacgccagtcagCACCGGG‑CGCGCGCG‑GCGTACCGGTGCTGACTGGCGTAGGTATAGCCGACTAGGTGTTTCACAAATAACGACCATAACTCGTGGCGCTTTTTGGTTGTATTTCCAAAACACCATACTAGCCAGCAcc                        >  2:1732147‑M1/19‑145 (MQ=255)
                                                                                                                                   acCGTCACATCTACCGCCCACCGGTACGC‑CGCGCGCGC‑CCGGTGCTGACTGGCGTAGGTATAGCCGACTAGGTGTTTCACAAATAACGACCATAACTCGTGGCGCTTTTTGGTTGTATTTCCAAAACACCATACTAGCCAGCACCGATTc                   >  2:1244902/1‑150 (MQ=255)
                                                                                                                                     cGTCACATCTACCGCCCACCGGTACGC‑CGCGCGCGC‑CCGGTGCTGACTGGCGTAGGTATAGCCGACTAGGTGTTTCACAAATAACGACCATAACTCGTGGCGCTTTTTGGTTGTATTTCCAAAACACCATACTAGCCAGCACCGATTCCt                 >  1:1961765/1‑150 (MQ=255)
                                                                                                                                       tCACATCTACCGCCCACCGGTACGC‑CGCGCGCGC‑CCGGTGCTGACTGGCGTAGGTATAGCCGACTAGGTGTTTCACAAATAACGACCATAAc                                                                         <  2:125346/92‑1 (MQ=255)
                                                                                                                                           aTCTACCGCCCACCGGTACGC‑CGCGCGCGC‑CCGGTGCTGACt                                                                                                                       <  1:2186280/42‑1 (MQ=255)
                                                                                                                                           aTCTACCGCCCACCGGTACGC‑CGCGCGCGC‑CCGGTGCTGACTGGCGTAGGTATAGCCGACTAGGTGTTTCACAAATAACGACCATAACTCGTGGCGCTTTTTGGTTGTATTTCCAAAACACCATACTAGCCAGCACCGATTCCTGTTTCa           <  2:2181264/150‑1 (MQ=255)
                                                                                                                                           aTCTACCGCCCACCGGTACGC‑CGCGCGCGC‑CCGGTGCTGACTGGCGTAGGTATAGCCGACTAGGTGTTTCACAAATAACGACCATAACTCGTGGCGCTTTTTGGTTGTATGCCCAAAACACCATACTAGCCAGCACCGATTCCTGTTTCa           >  1:23834/1‑150 (MQ=255)
                                                                                                                                            tCTACCGCCCACCGGTACGC‑CGCGCGCGC‑CCGCTGCTGCCTGGCGTAGGTATAGCCGATTAGGTGTTTCACAAATAACGACCATAACTCGTGGCGCTTTTTGGTTGTATTTCCAAAACACCATACTAGCCAGCACCGATTCCTGTTTCAg          <  1:2202605/150‑1 (MQ=255)
                                                                                                                                            gcTACCGCCCACCGGTACGC‑CGCGCGCGC‑CCGGTGCTGACTGGCGTAGGTATAGCCGACTAGGTGTTTCACAAATAACGACCATAACTCGTGGCGCTTTTTGGTTGTATTTCCAAACCACCATACTAGCCAGCACCGATTCCTGTTTCAg          <  2:1209473/149‑1 (MQ=255)
                                                                                                                                             cTACCGCCCACCGGTACGC‑CGCGCGCGC‑CCGGTGCTGACTGGCGTAGGTATAGCCGACTAGGTGTTTCACAAATAACGACCATAACTCGTGGCGCTTTTTGGTTGTATTTCCAAAACACCATACTAGCCAGCACCGATTCCTGTTTCAgg         >  1:2173326/1‑150 (MQ=255)
                                                                                                                                               aCCGCCCACCGGTACGC‑CGCGCGCGC‑CCGGTGCTGACTGGCGTAGGTATAGCCGACTAGGTGTTTCACAAATAACGACCATAACTCGTGGCGCTTTTTGGTTGTATTTCCAAAACACCATACTAGCCAGCACCGATTCCTGTTTCAGGAt       <  1:2408785/150‑1 (MQ=255)
                                                                                                                                                ccGCCCACCGGTACGC‑CGCGCGCGC‑CCGGTGCTGACTGGCGTAGGTATAGCCGACTAGGTGTTTCACAAATAACGACCATAACTCGTGGCGCTTTTTGGTTGTATTTCCAAAACACCATACTAGCCAGCACCGATTCCTGTTTCAGGATa      <  2:2361824/150‑1 (MQ=255)
                                                                                                                                                ccGCCCACCGGTACGC‑CGCGCGCGC‑CCGGTGCTGACTGGCGTAGGTATAGCCGACTAGGTGTTTCACAAATAACGACCATAACTCGTGGCGCTTTTTGGTTGTATTTCCAAAACACCATACTAGCCAGCACCGATTCCTGTTTCAGGATa      <  1:1086087/150‑1 (MQ=255)
                                                                                                                                                ccGCCCACCGGTACGC‑CGCGCGCGC‑CCGGTGCTGACTGGCGTAGGCATAGCCGACCAGGCGTTTCACCAATAACGACCATCACTCGTGGCGCTTTTTGGTTGTATTTCCAAAACACCATACTAGCCAGCACCGATTCCTGTTTCAGGATa      >  1:880534/1‑150 (MQ=38)
                                                                                                                                                 cGCCCACCGGTACGC‑CGCGCGCGC‑CCGGTGCTGACTGGCGTAGGTATAGCCGACTAGGTGTTTCACAAATAACGACCATAACTCGTGGCGCTTTTTGGTTGTATTTCCAAAACACCATACTAGCCAGCACCGATTCCTGTTTCAGGATAg     <  2:2173326/150‑1 (MQ=255)
                                                                                                                                                   cccACCGGTACGC‑CGCGCGCGC‑CCGGTGCTGACTGGCGTAGGTATAGCCGACTAGGTGTTTCACAAATAACGACCATAACTCGTGGCGCTTTTTGGTTGTATTTCCAAAACACCATACTAGCCAGCACCGATTCCTGTTTCAGGATAGGt   >  1:638987/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                      
CCGATACTGCCTTCATTCGGCAAGGCAATGCCGGCATACGCCGAGCGATATCCGAGACGCTTCAGAACCGGCAGCAGCACATCATAGAGCTGCCGAGCAATCCCGTTGCGGCGCTGTCCCTTCCGACATACACCGTCACATCTACCGCCCACCGGTACGC‑CGCGCGCGC‑CCGGTGCTGACTGGCGTAGGTATAGCCGACTAGGTGTTTCACAAATAACGACCATAACTCGTGGCGCTTTTTGGTTGTATTTCCAAAACACCATACTAGCCAGCACCGATTCCTGTTTCAGGATAGGTA  >  NC_002947/4302882‑4303179

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.