New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4350173 =	93 (1.050)	12 (0.160)	10/212	NT	13.3%	intergenic (‑181/+56)	galU/PP_3822	UTP‑glucose‑1‑phosphate uridylyltransferase/cytochrome c family protein
	?	NC_002947	4350224 =	77 (1.010)					intergenic (‑232/+5)	galU/PP_3822	UTP‑glucose‑1‑phosphate uridylyltransferase/cytochrome c family protein

AGAGGGATCCATCGAGAAGACGCGGGTGAAGTTTCATGCCAATGATGGGGTTAACCTGTATGGTAAGCAGGTTGATGGGGTGCTGATCGGACAAGGGACGGGTAGCTGAGGTAAGCCGGTGGCGGCCTCTT‑GGCGCG‑TGAGCCCGTCGAAGAGGCCGCCACCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4350337‑4350173 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aagaggccgccaccggcTTACCTCAGCTACCCGTCCCTTGTCCGATCAGCACCCCATCAACCTGCTTACCATACAGGTTAACCCCATCATTGGCATGAAACTTCACCCGCGTCTTCTCGATGGATCCCTCTACCAACCGCGGGTCCTGTGGCCGCTCGTGGC  >  NC_002947/4350224‑4350368                                                                                                                                                                                                                                                                                                                          AGAGGGATCCATCGAGAAGACGCGGGTGAAGTTTCATGCCAATGATGGGGTTAACCTGTATGGTAAGCAGGTTGATGGGGTGCTGATCGGACAAGGGACGGGTAGCTGAGGTAAGCCGGTGGCGGCCTCTT‑GGCGCG‑TGAGCCCGTCGAA                                                                                                                                                                  <  1:2152796/150‑1       ATCCATCGAGAAGACGCGGGTGAAGTTTCATGCCAATGATGGGGTTAACCTGTATGGTAAGCAGGTTGATGGGGTGCTGATCGGACAAGGGACGGGTAGCTGAGGTAAGCCGGTGGCGGCCTCTT‑GGCGCG‑TGAGCCCGTCGAAGAGGCC                                                                                                                                                            >  1:1618019/1‑150       ATCCATCGAGAAGACGCGGGTGAAGTTTCATGCCAATGATGGGGTTAACCTGTATGGTAAGCAGGTTGATGGGGTGCTGATCGGACAAGGGACGGGTAGCTGAGGTAAGCCGGTGGCGGCCTCTT‑GGCGCG‑TGAGCCCGTCGAAGAGGCC                                                                                                                                                            <  2:1445844/150‑1           ATCGAGAAGACGCGGGTGAAGTTTCATGCCAATGATGGGGTTAACCTGTATGGTAAGCAGGTTGATGGGGTGCTGATCGGACAAGGGACGGGTAGCTGAGGTAAGCCGGTGGCGGCCTCTT‑GGCGCG‑TGGGCCCGTCGAAGAGGCCGCCA                                                                                                                                                        >  1:204340/1‑150              GAGAAGACGCGGGTGAAGTTTCATGCCAATGATGGGGTTAACCTGTATGGTAAGCAGGTTGATGGGGTGCTGATCGGACAAGGGACGGGTAGCTGAGGTAAGCCGGTGGCGGCCTCTT‑GGCGCG‑TGAGCCCGTCGAAGAGGCCGCCACCG                                                                                                                                                     >  2:157105/1‑150              GAGAAGACGCGGGTGAAGTTTCATGCCAATGATGGGGTTAACCTGTATGGTAAGCAGGTTGATGGGGTGCTGATCGGACAAGGGACGGGTAGCTGAGGTAAGCCGGTGGCGGCCTCTT‑GGCGCG‑TGAGCCCGTCGAAGAGGCCGCCACCG                                                                                                                                                     >  1:404728/1‑150                              AGTTTCATGCCAATGATGGGGTTAACCTGTATGGTAAGCAGGTTGATGGGGTGCTGATCGGACAAGGGACGGGTAGCTGAGGTAAGCCGGTGGCGGCCTCTTCGACGGGCTCA‑CGCG‑CCAAGAGGCCGCCACCGGCTTACCTCAGCTACC                                                                                                                                     <  1:930539/150‑1                                                                    CAGGTTGATGGGGTGCTGATCGGACAAGGGACGGGTAGCTGAGGTAAGCCGGTGGCGGCCTCTT‑GGCGCG‑TGAGCCCGTCGAA                                                                                                                                                                  >  2:959306/1‑83                                                                    CAGGTTGATGGGGTGCTGATCGGACAAGGGACGGGTAGCTGAGGTAAGCCGGTGGCGGCCTCTT‑GGCGCG‑TGAGCCCGTCGAA                                                                                                                                                                  <  1:959306/83‑1                                                                                                                              CCTCTT‑GGCGCG‑TGAGCCCGTCGAAGAGGCCGCCACCGGCTTACCTCAGCTACCCGTCCCTTGTCCGATCAGCACCC                                                                                                              <  2:1177568/77‑1                                                                                                                              CCTCTT‑GGCGCG‑TGAGCCCGTCGAAGAGGCCGCCACCGGCTTACCTCAGCTACCCGTCCCTTGTCCGATCAGCACCC                                                                                                              >  1:1177568/1‑77                                                                                                                              CCTCTT‑GGCGCG‑TGAGCCCGTCGAAGAGGCCGCCACCGGCTTACCTCAGCTACCCGTCCCTTGTCCGATC                                                                                                                     >  2:285975/1‑70                                                                                                                              CCTCTT‑GGCGCG‑TGAGCCCGTCGAAGAGGCCGCCACCGGCTTACCTCAGCTACCCGTCCCTTGTCCGATC                                                                                                                     <  1:285975/70‑1                                                                                                                               CTCTT‑GGCGCG‑TGAGCCCGTCGAAGAGGCCGCCACCGGCTTACCTCAGCTACCCGTCCCTTGTCCGATCAGCACCCCATCAACCTGCTTACCATACAGGTTAACCCCATCATTGGCATGAAACTTCACCCGCGTCTTCTCGATGGATCCC                                    >  1:1284676/1‑150                                                                                                                                  TT‑GGCGCG‑TGAGCCCGTCGAAGAGGCCGCCACCGGCTTACCTCAGCTACCCGTCCCTTGTCCGATCAGCACCCCATCAACCTGCTTACCATACAGGTTAACCCCATCATTGGCATGAAACTTCACCCGCGTCTTCTCGATGGATCCCTCT                                 >  1:2062175/1‑150                                                                                                                                  TT‑GGCGCG‑TGAGCCCGTCGAAGAGGCCGCCACCGGCTTACCTCAGCTACCCGTCCCTTGTCCGAT                                                                                                                      <  1:2385226/65‑1                                                                                                                                  TT‑GGCGCG‑TGAGCCCGTCGAAGAGGCCGCCACCGGCTTACCTCAGCTACCCGTCCCTTGTCCGAT                                                                                                                      >  2:2385226/1‑65                                                                                                                                     GGCGCG‑TGAGCCCGTCGAAGAGGCCGCCACCGGCTTACCTCAGCTACCCGTCCCTTGTCCGATCAGCACCCCATCAACCTGCTTACCATACAGGTTAACCCCATCATTGGCATGAAACTTCACCCGCGTCTTCTCGATGGATCCCTCTAC                               <  2:930539/150‑1                                                                                                                                      GCGCG‑TGAGCCCGTCGAAGAGGCCGCCACCGGCTTACCTCAGCTACCCGTCCCTTGTCCGATCAGCACCCCATCAACCTGCTTACCATACAGGTTAACCCCATCATTGGCATGAAA                                                                >  2:86295/1‑116                                                                                                                                      GCGCG‑TGAGCCCGTCGAAGAGGCCGCCACCGGCTTACCTCAGCTACCCGTCCCTTGTCCGATCAGCACCCCATCAACCTGCTTACCATACAGGTTAACCCCATCATTGGCATGAAA                                                                <  1:86295/116‑1                                                                                                                                                      ccAGAGGCCGCCACCGGCTTACCTCAGCTACCCGTCCCTTGTCCGATCAGCACCCCATCAACCTGCTTACCATACA                                                                                         >  2:1271243/3‑76                                                                                                                                                      ccAGAGGCCGCCACCGGCTTACCTCAGCTACCCGTCCCTTGTCCGATCAGCACCCCATCAACCTGCTTACCATACA                                                                                         <  1:1271243/74‑1                                                                                                                                                         ttGGCTGCCACCGGCTTACCTCAGCTACCCGTCCCTTGTCCGATCAGCACACCATCAACCTGCTTACCATACAGGTTAACCCCATCATTGGCATGAAACTTCACCCGCGTCTTCTCGATGGATCCCTCTACCAACCGCGGGTCCTGTGGC            >  2:1552969/3‑150                                                                                                                                                            GCCGCCACCGGCTTACCTCAGCTACCCGTCCCTTGTCCGATCAGCACCCCATCAACCTGCTTACCATACAGGTTAACCCCATCATTGGCATGAAACTTCACCCGCGTCTTCTCGATGGATCCCTCTACCAACCGCGGGTCCTGTGGCCGC         >  2:1211615/1‑150                                                                                                                                                            GCCGCCACCGGCTTACCTCAGCTACCCGTCCCTTGTCCGATCAGCACCCCATCAACCTGCTTACCATACA                                                                                         >  2:1049916/1‑70                                                                                                                                                            GCCGCCACCGGCTTACCTCAGCTACCCGTCCCTTGTCCGATCAGCACCCCATCAACCTGCTTACCATACA                                                                                         <  1:1049916/70‑1                                                                                                                                                              CGCCACCGGCTTACCTCAGCTACCCGTCCCTTGTCCGATCAGCACCCCATCAACCTGCTTACCATACAGGTTAACCCCATCATTGGCATGAAACTTCACCCGCGTCTTCTCGATGGATCCCTCTACCAACCGCGGGTCCTGTGGCCGCTC       >  2:1572724/1‑150                                                                                                                                                              CGCCACCGGCTTACCTCAGCTACCCGTCCCTTGTCCGATCAGCACCCCATCAACCTGCTTACCATACAGGTTAACCCCATCATTGGCATGAAACTTCACCCGCGTCTTCTCGATGGATCCCTCTACCAACCGCGGGTCCTGTGGCCGCTC       >  1:1761157/1‑150                                                                                                                                                              CGCCACCGGCTTACCTCAGCTACCCGTCCCTTGTCCGATCAGCACCCCATCAACCTGCTTACCATACAGGTTAACCCCATCATTGGCATGAAACTTCACCCGCGTCTTCTCGATGGATCCCTCTACCAACCGCGGGTCCTGTGGCCGCTC       >  2:673465/1‑150                                                                                                                                                               GCCACCGGCTTACCTCAGCTACCCGTCCCTTGTCCGATCAGCACCCCATCAACCTGCTTACCATACAGGTTAACCCCATCATTGGCATGAAACTTCACCCGCGTCTTCTCGATGGATCCCTCTACCAACCGCGGGTCCTGTGGCCGCTCG      >  2:615439/1‑150                                                                                                                                                               GCCACCGGCTTACCTCAGCTACCCGTCCCTTGTCCGATCAGCACCCCATCAACCTGCTTACCATACAGGTTAACCCCATCATTGGCATGAAACTTCACCCGCGTCTTCTCGATGGATCCCTCTAC                               >  1:1969015/1‑125                                                                                                                                                               GCCACCGGCTTACCTCAGCTACCCGTCCCTTGTCCGATCAGCACCCCATCAACCTGCTTACCATACAGGTTAACCCCATCATTGGCATGAAACTTCACCCGCGTCTTCTCGATGGATCCCTCTAC                               <  2:1969015/125‑1                                                                                                                                                                CCACCGGCTTACCTCAGCTACCCGTCCCTTGTCCGATCAGCACCCCATCAACCTGCTTACCATACAGGTTAACCCCATCATTGGCATGAAACTTCACCCGCGTCTTCTCGATGGATCCCTCTACCAACCGCGGGTCCTGTGGCCGCTCGT     >  1:1077593/1‑150                                                                                                                                                                 CACCGGCTTACCTCAGCTACCCGTCCCTTGTCCGATCAGCACCCCATCAACCTGCTTACCATACAGGTTAACCCCATCATTGGCATGAAACTTCACCCGCGTCTTCTCGATGGATCCCTCTACCAACCGCGGGTCCTGTGGCCGCTCGTG    <  2:2152796/150‑1                                                                                                                                                                   CCGGCTTACCTCAGCTACCCGTCCCTTGTCCGATCAGCACCCCATCAACCTGCTTACCATACAGGTTAACCCCATCATTGGCATGAAACTTCACCCGCGTCTTCTCGATGGATCCCTCTACCAACCGCGGGTCCTGTGGCCGCTCGTGGC  <  1:995406/150‑1                                                                                                                                                                                                                                                                                                                          AGAGGGATCCATCGAGAAGACGCGGGTGAAGTTTCATGCCAATGATGGGGTTAACCTGTATGGTAAGCAGGTTGATGGGGTGCTGATCGGACAAGGGACGGGTAGCTGAGGTAAGCCGGTGGCGGCCTCTT‑GGCGCG‑TGAGCCCGTCGAAGAGGCCGCCACCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4350337‑4350173 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aagaggccgccaccggcTTACCTCAGCTACCCGTCCCTTGTCCGATCAGCACCCCATCAACCTGCTTACCATACAGGTTAACCCCATCATTGGCATGAAACTTCACCCGCGTCTTCTCGATGGATCCCTCTACCAACCGCGGGTCCTGTGGCCGCTCGTGGC  >  NC_002947/4350224‑4350368

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.