| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4577844 = | 106 (1.200) | 15 (0.180) | 12/236 | NT | 13.3% | intergenic (+9/+100) | PP_4057/glgB | membrane protein/1,4‑alpha‑glucan branching enzyme |
| ? | NC_002947 | 4577929 = | 94 (1.110) | intergenic (+94/+15) | PP_4057/glgB | membrane protein/1,4‑alpha‑glucan branching enzyme | |||||
GCTGGCCCTGAACCTGCCGCCGTTGGGGGTGTTGATCATGAAGCCCGCCTGATCGGTTGGCTGTACTGGCCCTTTCGCGGGAGACCCGTTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCGGGTTTACCCGCGAAGGGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4577995‑4577844‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggccAGTACAGCCAACCGATCAGGCGGGCTTCATGATCAACACCCCCAACGGCGGCAGGTTCAGGGCCAGCGATAATGGCTGCCCGTGGCTGGCCACTTCGTCACTGGCCACCGCCCCGAGATTGCCGACATTCGACCCGGCATACAGCTCGG > NC_002947/4577929‑4578077 GCTGGCCCTGAACCTGCCGCCGTTGGGGGTGTTGATCATGAAGCCCGCATGATCGGTTGGCTGTACTGGCCCTTTCGCGGGAGACCCGTTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCGGGTTTACCCGCGAAGGGG < 2:1766631/150‑1 TGGCCCTGAACCTGCCGCCGTTGGGGGTGTTGATCATGAAGCCCGCCTGATCGGTTGGCTGTACTGGCCCTTTCGCGGGAGACCCGTTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCGGGTTTACCCGCGAAGGGGCC < 2:390019/150‑1 TGGCCCTTTCGCGGGAGACCCGTTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCGGGTTTACCCGCGAAGGGGCCAGTACAGCCAACCGATCAGGCGGGCTTCATGA > 1:107329/1‑118 TGGCCCTTTCGCGGGAGACCCGTTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCGGGTTTACCCGCGAAGGGGCCAGTACAGCCAACCGATCAGGCGGGCTTCATGA < 2:107329/118‑1 CCCTTTCGCGGGAGACCCGTTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCGGGTTTACCCGCGAAGGGGCCAGTACAGCCAACCGATCAGGCGGGCTTCATGATCAACACCCCCAACGGCGGCAGGTTCAGGGCCAGC > 2:1247669/1‑150 CCTTTCGCGGGAGACCCGTTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCGGGTTTACCCGCGAAGGGGCCAGTACAGCCAACCGATCAGGCGGGCTTCATGATCAACACCCCCAACGGCGGCAGGTTCAGGGCCAGCG > 1:1512229/1‑150 CCTTTCGCGGGAGACCCGTTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCGGGTTTACCCGCGAAGGGGCCAGTACAGCCAACCGATCAGGCGGGCTTCATGATCAAAACCCCCAACGGCGCCAGGTTCAGGGCAAGCG > 2:2004395/1‑150 CCTTTCGCGGGAGACCCGTTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCGGGTTT‑CCCGCGAAAGGGCCAGTACAGCCAACCGATCAGGCGGGCTTCATGATCAACACCCCCAACGGCGGCAGGTTCAGCGCCAGCGA > 1:2020354/1‑150 GCGGGAGACCCGTTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCGGGTTTACCCGCGAAGGGGCCAGTACAGCCAACCGATCAGGCGGGCTTCATGATCAACACCCCCAACGGCGGCAGGTTCAGGGCCAGCGATAATG > 1:412477/1‑150 GAGACCCGTTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCGGGTTTACCCGCGAAGGGGCCGGTACAGCCAACCGATCAGGCGGGCTTCATGATCAACACCCCCAACGGCGGCAGGTTCAGGGCCAGCGATAATGGCTG > 1:549752/1‑150 CCGTTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCGGGTCTA‑CCGCGCGAGGGCCAGTACAGCCTTCTGATCAGGCGGGCTTCATGATCAACACCCCCAACGGCGGCAGGTTCAGGGCCAGCGATAATGGCTGCCCGTG > 1:295373/1‑150 TCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCGGGTTTACCCGCGAAGGGGCCAGTACAGCCAACCGATCAGGCGGGCTTCATGATCAACACCCCCAACGGCGGCAGGTTCAGGGCCAGCGATAATGGCTGCCCGTGGCT < 2:412477/150‑1 TACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCGGGTTTACCCGCGAAGGGGCCAGTACACCCAACCGATCAGGCGGGCTTCATGATCAACACCCCCAACGGCGGCAGGTTCAGGGCCAGCGATAATGGCTGCCCGTGGCTGGC > 1:324651/1‑150 TACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAACNGG‑TCNCCCNCGAAAGGGCCAGTACAGCCAGCCGATCAGGCGGGCTTCATGATCAACACCCCCAACGGCGGCAGGTTCAGGGCCAGCGATAATGGCTGCCCGTGGCTGGCC > 1:1942713/1‑150 CACCCGGCGGTGACCCGTGTAGGAGCGGGTTTACCCGCGAAGGGGCCAGTACAGCCAACCGATCAGGCGGGCTTCATGATCAACACCCCCAACGGCGGCAGGTTCAGGGCCAGCGATAATGGCTGCCCGTGGCTGGCCACTTCGTCACTG < 2:324651/150‑1 GTGTAGGAGCGGGTTTACCCGCGAAGGGGCCGGTACAGCCAACCGATCAGGCGGGCTTCATGATCAACACCCCCAACGGCGGCAGGTTCAGGGCCAGCGATAATGGCTGCCCGTGGCTGGCCACTTCGTCACTGGCCACCGCCCCGAGAT < 2:549752/150‑1 CGGGTTTACCCGCGAAGGGGCCAGTACAGCCAACCGATCAGGCGGGCTTCATGATCAACACCCCCAACGGCGGCAGGTTCAGGGCCAGCGATAATGGCTGCCCGTGGCTGGCCACTTCGTCACTGGCCACCGCCCCGAGATTGCCGACAT < 2:1512229/150‑1 CCAGTACAGCCAACCGATCAGGCGGGCTTCATGATCAACACCCCCAACGGCGGCAGGTTCAGGGCCAGCGATAATGGCTGCCCGTGGCTGGCCACTTCGTCACTGGCCACCGCCCCGAGATTGCCGACATTCGACCCGGCATACAGCTCG < 1:1428360/150‑1 CAGTACAGCCAACCGATCAGGCGGGCTTCATGATCAACACCCCCAACGGCGGCAGGTTCAGGGCCAGCGATAATGGCTGCCCGTGGCTGGCCACTTCGTCACTGGCCACCGCCCCGAGATTGCCGACATTCGACCCGGCATACAGCTCGG < 1:1303707/150‑1 CAGTACAGCCAACCGATCAGGCGGGCTTCATGATCAACACCCCCAACGGCGGCAG > 2:293782/1‑55 CAGTACAGCCAACCGATCAGGCGGGCTTCATGATCAACACCCCCAACGGCGGCAG < 1:293782/55‑1 GCTGGCCCTGAACCTGCCGCCGTTGGGGGTGTTGATCATGAAGCCCGCCTGATCGGTTGGCTGTACTGGCCCTTTCGCGGGAGACCCGTTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCGGGTTTACCCGCGAAGGGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4577995‑4577844‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggccAGTACAGCCAACCGATCAGGCGGGCTTCATGATCAACACCCCCAACGGCGGCAGGTTCAGGGCCAGCGATAATGGCTGCCCGTGGCTGGCCACTTCGTCACTGGCCACCGCCCCGAGATTGCCGACATTCGACCCGGCATACAGCTCGG > NC_002947/4577929‑4578077 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |