| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4588043 | 104 (1.170) | 11 (0.140) | 10/218 | NT | 11.1% | intergenic (‑183/‑139) | PP_4063/ivd | long‑chain fatty acid‑‑CoA ligase/isovaleryl‑CoA dehydrogenase |
| ? | NC_002947 | = 4588104 | 84 (1.070) | intergenic (‑244/‑78) | PP_4063/ivd | long‑chain fatty acid‑‑CoA ligase/isovaleryl‑CoA dehydrogenase | |||||
TTTTGGGCACGGCTGAAGCAAGCGGGAATACTCTGGCGCAGATTTACGTTTACGTAAAGGTGACGAGTGGATTGACAGTGACCCTCATGCAGGTTTACGTTAACGTAAAGGTGATGAACGACACCCACTTGAGGCGCCACGCCGCCCTCTGTGGGAGCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4587882‑4588043‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgtgggagcgggcATGCCCGCGAATACGTCAGCAGGGTCACCGTCATTACCTGATTGGTCGCATTCGCGGGCAAGCCCGCTCCCACAGAGGGCGGCGTGGCGCCTCAAGTGGGTGTCGTTCATCACCTTTACGTTAACGTAAACCTGCATGAGGGTCACTG < NC_002947/4588104‑4587957 TTTTGGGCACGGCTGAAGCAAGCGGGAATACTCTGGCGCAGATTTACGTTTACGTAAAGGTGACGAGTGGATTGACAGTGACCCTCATGCAGGTTTACGTTAACGTAAAGGTGATGAACGACACCCACTTGAGGCGCCACGCCGCCCTCT > 1:2073034/1‑150 TTTGGGCACGGCTGAAGCAAGCGGGAATACTCTGGCGCAGATTTACGTTTACGTAAAGGTGACGAGTGGATTGACAGTGACCCTCATGCAGGTTTACGTTAACGTAAAGGTGATGAACGACACCCACTTGAGGCGCCACGCCGCCCTCTG > 2:486924/1‑150 TTGGGCACGGCTGAAGCAAGCGGGAATCCTCTGGCGCAGATTTACGTTTACCTAAAGGTGACGAGTGGATTGACAGTGACCCTCATGCAGGTTTACGTTACCGTAAAGGTGATGAACGACACCCACTTGAGGCGCCACGCCGCCCTCTGT < 1:1567770/150‑1 TTGGGCACGGCTGAAGCAAGCGGGAATACTCTGGCGCAGATTTACGTTTACGTAAAGGTGACGAGTGGATTGACAGTGACCCTCATGCAGGTTTACGTTAACGTAAAGGTGATGAACGACACCCACTTGAGGCGCCACGCCGCCCTCTGT < 1:1422909/150‑1 TGGGCACGGCTGAAGCAAGCGGGAATACTCTGGCGCAGATTTACGTTTACGTAAAGGTGACGAGTGGATTGACAGTGACCCTCATGCAGGTTTACGTTAACGTAAAGGTGATGAACGACACCCACTTGAGGCGCCACGCCGCCCTCTGTG < 2:1406212/150‑1 TGGGCACGGCTGAAGCAAGCGGGAATACTCTGGCGCAGATTTACGTTTACGTAAAGGTGACGAGTGGATTGACAGTGACCCTCATGCAGGTTTACGTTAACGTAAAGGTGATGAACGACACCCACTTGAGGCGCCACGCCGCCCTCTGTG < 1:1336121/150‑1 TGGGCACGGCTGAAGCAAGCGGGAATACTCTGGCGCAGATTTACGTTTACGTAAAGGTGACGAGTGGATTGACAGTGACCCTCATGCAGGTTTACGTTAACGTAAAGGTGATGAACGACACCCACTTGAGGCGCCACGCCGCCCTCTGTG < 2:358499/150‑1 TGGGCACGGCTGAAGCAAGCGGGAATACTCTGGCGCAGATTTACGTTTACGTAAAGGTGACGAGTGGATTGACAGTGACCCTCATGCAGGTTTACGTTAACGTAAAGGTGATGAACGACACCCACTTGAGGCGCCACGCCGCCCTCTGTG < 2:56291/150‑1 GGGCACGGCTGAAGCAAGCGGGGATACTCAGGCGCAGATTTACGTTTACGTAAAGGTGACGAGTGGATTGACAGTGACCCTCATGCAGGTTTACGTGAACGGAAAGGTGATGAACGACACCCACTTGAGGCCGCACGCCGACGTCTTTGt > 2:1376576/1‑149 GGGCACGGCTGAAGCAAGCGGGAATACTCTGGCGCAGATTTACGTTTACGTAAAGGTGACGAGTGGATTGACAGTGACCCTCATGCAGGTTTACGTTAACGTAAAGGTGATGAACGACACCCACTTGAGGCGCCACGCCGCCCTCTGTGG < 1:1245977/150‑1 CGGCTGAAGCAAGCGGGAATACTCTGGCGCAGATTTACGTTTACGTAAAGGTGACGAGTGGATTGACAGTGACCCTCATGCAGGTTTACGTTAACGTAAAGGTGATGAACGACACCCACTTGAGGCGCCACGCCGCCCTCTGTGGGAGCG < 1:486924/150‑1 CTGAAGCAAGCGGGAATACTCTGGCGCAGATTTACGTTTACGTAAAGGTGACGAGTGGATTGACAGTGACCCTCATGCAGGTTTACGTTAACGTAAAGGTGATGAACGACACCCACTTGAGGCGCCACGCCGCCCTCTGTGGGAGCGGGC < 2:684934/150‑1 CTGAAGCAAGCGGGAATACTCTGGCGCAGATTTACGTTTACGTAAAGGTGACGAGTGGATTGACAGTGACCCTCATGCAGGTTTACGTTAACGTAAAGGTGATGAACGACACCCACTTGAGGCGCCACGCCGCCCTCTGTGGGAGCGGGC < 1:1652114/150‑1 GGGAATACTCTGGCGCAGATTTACGTTTACGTAAAGGTGACGAGTGGATTGACAGTGACCCTCATGCAGGTTTACGTTAACGTAAAGGTGATGAACGACACCCACTTGAGGCGCCACGCCGCCCTCTGTGGGAGCGGGCAAGCCCGCtc < 2:2384358/149‑3 GGGAATACTCTGGCGCAGATTTACGTTTACGTAAAGGTGACGAGTGGATTGACAGTGACCCTCATGCAGGTTTACGTTAACGTAAAGGTGATGAACGACACCCACTTGAGGCGCCACGCCGCCCTCTGTGGGAGCGGGCAAGCCCGCtc > 1:2384358/1‑147 AATACTCTGGCGCAGATTTACGTTTACGTAAAGGTGACGAGTGGATTGACAGTGACCCTCATGCAGGTTTACGTTAACGTAAAGGTGATGAACGACACCCACTTGAGGCGCCACGCCGCCCTCTGT < 2:457397/126‑1 AATACTCTGGCGCAGATTTACGTTTACGTAAAGGTGACGAGTGGATTGACAGTGACCCTCATGCAGGTTTACGTTAACGTAAAGGTGATGAACGACACCCACTTGAGGCGCCACGCCGCCCTCTGT > 1:457397/1‑126 GCAGATTTACGTTTACGTAAAGGTGACGAGTGGATTGACAGTGACCCTCATGCAGGTTTACGTTAACGTAAAGGTGATGAACGACACCCACTTGAGGCGCCACGCCGCCCTCTGTGGGAGCGGGC < 1:1742457/125‑1 GCAGATTTACGTTTACGTAAAGGTGACGAGTGGATTGACAGTGACCCTCATGCAGGTTTACGTTAACGTAAAGGTGATGAACGACACCCACTTGAGGCGCCACGCCGCCCTCTGTGGGAGCGGGC > 2:1742457/1‑125 TTACGTAAAGGTGACGAGTGGATTGACAGTGACCCTCATGCAGGTTTACGTTAACGTAAAGGTGATGAACGACACCCACTTGAGGCGCCACGCCGCCCTCTGTGGGAGCGGGCATGCCCGCGAATACGTCAGCAGGGTCACCGTCATTAC > 1:2117903/1‑150 TAAAGGTGACGAGTGGATTGACAGTGACCCTCATGCAGGTTTACGTTAACGTAAAGGTGATGAACGACACCCACTTGAGGCGCCACGCCGCCCTCTGTGGGAGCGGG < 1:2339743/107‑1 TAAAGGTGACGAGTGGATTGACAGTGACCCTCATGCAGGTTTACGTTAACGTAAAGGTGATGAACGACACCCACTTGAGGCGCCACGCCGCCCTCTGTGGGAGCGGG > 2:2339743/1‑107 CGAGTGGATTGACAGTGACCCTCATGCAGGTTTACGTTAACGTAAAGGTGATGAACGACACCCACTTGAGGCGCCACGCCGCCCTCTGTGGGAGCGAGCATGCCCGCGAATACGTCAGCAGTGTCACCGTCATTATGCGATTGTTCTCAT < 2:91898/150‑1 ATTGACAGTGACCCTCATGCAGGTTTACGTTAACGTAAAGGTGATGAACGACACCCACTTGAGGCGCCACGCCGCCCTCTGTGGGAGCGGGCATGCCCGCGAATACGTCAGCAGGGTCACCGTCATTACCTGATTGGTCGCATTCGCGGG < 2:2117903/150‑1 GACAGTGACCCTCATGCAGGTTTACGTTAACGTAAAGGTGATGAACGACACCCACTTGAGGCGCCACGCCGCCCCCTGTGGGAGCGGGCATGCCCGCGAATACGTCAGCAGGGTCACCGTCATTACCTGATTGGTCGCATTCGCGG < 2:719900/146‑1 GACAGTGACCCTCATGCAGGTTTACGTTAACGTAAAGGTGATGAACGACACCCACTTGAGGCGCCACGCCGCCCCCTGTGGGAGCGGGCATGCCCGCGAATACGTCAGCAGGGTCACCGTCATTACCTGATTGGTCGCATTCGCGG > 1:719900/1‑146 tcTGACCCTCATGCAGGTTTACGTTAACGTAAAGGTGATGAACGACACCCACTTGAGGCGCCACGCCGCCCTCTGTGGGAGCGGGCATGCCCGCGAATACGTCAGCAGGGTCACCGTCATTACCTGATTGGTCGCATTCGCGGGCAAGCC < 2:1507298/148‑1 ACCCTCATGCAGGTTTACGTTAACGTCACGGCGATGAACGACACCCACTTGATTCGCCACGCCGCCCTCTGTGGGAGCGGGCATGCCCGCGAATACGTCAGCAGGGTCACCGTCATTACTTGATTGGTCGCATTCGCGGGCAAGCCCaga > 1:1507298/1‑147 TCATGCAGGTTTACGTTAACGTAAAGGTGATGAACGACACCCACTTGAGGCGCCACGCCGCCCTCTGTGGGAGCGGGCATGCCCGCGAATACGTCAGCAGGGTCACCGTCATTACCTGATTGGTCGCATTCGCGGGCAAGCCCGCTCCCA > 1:514501/1‑150 ATGCAGGTTTACGTTAACGTAAAGGTGATGAACGACACCCACTTGAGGCGCCACGCCGCCCTCTGTGGGAGCGGGCATGCCCGCGAATACGTCAGCAGGGTCACCGTCATTACCTGATTGGTCGCATTCGCGGGCAAGCCCGCTCCCACA < 2:514501/150‑1 caTGTGGGAACAGGCATGCCCGCGAATACGTCAGCAGGGTCACCGTCATTACCTGATTGGTCGCATTCGCGGGCAAGCCCGCTCCCACAGAGGGCGGCGTGGCGCCTCAAGTGGGTGTCGTTCATCACCTTTACGTTAACGTAAACCTGC > 2:1079587/3‑150 TGTGGGAGCGGGCATGCCCGCGAATACGTCAGCAGGGTCACCGTCATTACCTGATTGGTCGCATTCGCGGGCAAGCCCGCTCCCACAGAGGGCGGCGTGGCGCCTCAAGTGGGTGTCGTTCATCACCTTTACGTTAACGTAAACCTGCAT < 1:2166333/150‑1 TGTGGGAGCGGGCATGCCCGCGAATACGTCAGCAGGGTCACCGTCATTACCTGATTGGTCGCATTCGCGGGCAAGCCCGCTCCCACAGAGGGCGGCGTGGCGCCTCAAGTGGGTGTCGTTCATCACCTTTACGTTAACGTAAACCTGCAT < 1:133706/150‑1 GTGGGAGCGGGCATGCCCGCGAATACGTCAGCAGGGTCACCGTCATTACCT < 1:1725452/51‑1 GTGGGAGCGGGCATGCCCGCGAATACGTCAGCAGGGTCACCGTCATTACCT > 2:1725452/1‑51 gcGAGCGGGCATGCCCGCGAATACGTCAGCAGGGTCACCGTCATTACCGGATTGGTCGCATTCGCGGGCAAGCCCGCTCCCACAGA > 2:1901181/3‑86 GGGAGCGGGCATGCCCGCGAATACGTCAGCAGGGTCACCGTCATTCCCTGATTGGTCGCATTCGCGGGCAAGCCCGCTCCCACAGA < 1:1901181/86‑1 GGAGCGGGCATGCCCGCGAATACGTCAGCAGGGTCACCGTCATTACCTGATTGGTCGCATTCGCGGGCAAGCCCGCTCCCACAGAGGGCGGCGTGGCGCCTCAAGTGGGTGTCGTTCATCACCTTTACGTTAGCGTAGTCCTGCATGAGG < 2:2153860/150‑1 GGAGCGGGCATGCCCGCGAATACGTCAGCAGGGTCACCGTCATTACCTGATTGGTCGCATTCGCGGGCAAGCCCGCTCCCACAGAGGGCGGCGTGGCGCCTCAAGTGGGTGTCGTTCATCACCTTTACGTTAACGTAAACCTGCATGAGG < 1:1199618/150‑1 GGAGCGGGCATGCCCGCGAATACGTCAGCAGGGTCACCGTCATTACCTGATTGGTCGCATTCGCGGGCAAGCCCGCTCCCACAGAGGGCGGCGTGGCGCCTCAAGTGGGTGTCGTTCATCACCTTTACGTTAACGTAAACCTGCATGAGG < 1:1371736/150‑1 GGAGCGGGCATGCCCGCGAATACGTCAGCAGGGTCACCGTCATTACCTGATTGGTCGCATTCGCGGGCAAGCCCGCTCCCACAGAGGGCGGCGTGGCGCCTCAAGTGGGTGTCGTTCATCACCTTTACGTTAACGTAAACCTGCATGAGG > 1:931651/1‑150 GGAGCGGGCATGCCCGCGAATACGTCAGCAGGGTCACCGTCATTACCTGATTGGTCGCATTCGCGGGCAAGCCCGCTCCCACAGAGGGCGGCGTGGCGCCTCAAGTGGGTGTCGTTCATCACCTTTACGTTAACGTAAACCTGCATGAGG < 2:1150446/150‑1 GGGCATGCCCGCGAATACGTCAGCAGGGTCACCGTCATTACCTGATTGGTCGCATTCGCGGGCAAGCCCGCTCCCACAGAGGGCGGCGTGGCGCCTCAA > 2:94627/1‑99 GGGCATGCCCGCGAATACGTCAGCAGGGTCACCGTCATTACCTGATTGGTCGCATTCGCGGGCAAGCCCGCTCCCACAGAGGGCGGCGTGGCGCCTCAA < 1:94627/99‑1 GGCATGCCCGCGAATACGTCAGCAGGGTCACCGTCATTACCTGATTGGTCGCATTCGCGGGCAAGCCCGCTCCCACAGAGGGCGGCGTGGCGCCTCAAGTGGGTGTCGTTCATCACCTTTACGTTAACGTAAACCTGCATGAGGGTCACT < 1:1751380/150‑1 GCATGCCCGCGAATACGTCAGCAGGGTCACCGTCATTACCTGATTGGTCGCATTCGCGGGCAAGCCCGCTCCCACAGAGGGCGGCGTGGCGCCTCAAGTGGGTGTCGTTCATCACCTTTACGTTAACGTAAACCTGCATGAGGGTCACTG > 1:21353/1‑150 GCATGCCCGCGAATACGTCAGCAGGGTCACCGTCATTACCTGATTGGTCGCATTCGCGGGCAAGCCCGCTCCCACAGAGGGCGGCGTGGCGCCTCAAGTGGGTGTCGTTCATCACCTTTACGTTAACGTAAACCTGCATGAGGGTCACTG > 1:309809/1‑150 TTTTGGGCACGGCTGAAGCAAGCGGGAATACTCTGGCGCAGATTTACGTTTACGTAAAGGTGACGAGTGGATTGACAGTGACCCTCATGCAGGTTTACGTTAACGTAAAGGTGATGAACGACACCCACTTGAGGCGCCACGCCGCCCTCTGTGGGAGCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4587882‑4588043‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgtgggagcgggcATGCCCGCGAATACGTCAGCAGGGTCACCGTCATTACCTGATTGGTCGCATTCGCGGGCAAGCCCGCTCCCACAGAGGGCGGCGTGGCGCCTCAAGTGGGTGTCGTTCATCACCTTTACGTTAACGTAAACCTGCATGAGGGTCACTG < NC_002947/4588104‑4587957 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |