New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5477138 =18 (0.200)18 (0.310) 13/164 NT 58.1% intergenic (+3/+109) PP_4813/PP_4814 PAP2 family protein/DedA family protein/ATP‑dependent protease La domain‑containing protein
?NC_002947 5477237 = 14 (0.240)intergenic (+102/+10) PP_4813/PP_4814 PAP2 family protein/DedA family protein/ATP‑dependent protease La domain‑containing protein

CTGACCCTCGATTCGCCACAGCAGCGGCTGGGCGAGATCCAGAAGCTGCTGGAGCGGATTCAGGGGGAGTTGTTCGCCTGATGGTTCTGTATTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGATAAGCGCGATCCCGTGCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5477327‑5477138
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtaggagcgggtttacccgcgaataggccggcacaggcaaTACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCCCAGCCGCTGCTGTGGCGAATCGAGGGTCAGCAGGTCCAGCTTGTCCTCTTCCATGAACGGCAACAGGTACGCCAGCTGATTGGCCA  >  NC_002947/5477237‑5477383
                                                                                                                                                                                                                                                                                                                                                 
CTGACCCTCGATTCGCCACAGCAGCGGCTGGGCGAGATCCAGAAGCTGCTGGAGCGGATTCAGGGGGAGTTGTTCGCCTGATGGTTCTGTATTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGATAAGCGCGATCCCGTGC                                                                                                                                                                                             >  1:976378/1‑150
   ACCCTCGATTCGCCACAGCAGCGGCTGGGCGAGATCCAGAAGCTGCTGGAGCGGATTCAGGGGGAGTTGTTCGCCTGATGGTTCTGTATTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGATAAGCGCGATCCCGTGCGTA                                                                                                                                                                                          >  2:1137395/1‑150
    CCCTCGATTCGCCACAGCAGCGGCTGGGCGAGATCCAGAAGCTGCTGGAGCGGATTCAGGGGGAGTTGTTCGCCTGATGGTTCTGTATTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGATAAGCGCGATCCCGTGCGTAG                                                                                                                                                                                         <  1:479111/150‑1
    CCCTCGATTCGCCACAGCAGCGGCTGGGCGAGATCCAGAAGCTGCTGGAGCGGATTCAGGGGGAGTTGTTCGCCTGATGGTTCTGTATTGCCCGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGATAAGCGCGATCCCGTGCGTAG                                                                                                                                                                                         <  1:615491/150‑1
      CTCGATTCGCCACAGCAGCGGCTGGGCGAGATCCAGAAGCTGCTGGAGCGGATTCAGGGGGAGTTGTTCGCCTGATGGTTCTGTATTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGATAAGCGCGATCCCGTGCGTAGGA                                                                                                                                                                                       <  2:976378/150‑1
      CTCGATTCGCCACAGCAGCGGCTGGGCGAGATCCAGAAGCTGCTGGAGCGGATTCAGGGGGAGTTGTTCGCCTGATGGTTCTGTATTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGATAAGCGCGATCCCGTGCGTAGGA                                                                                                                                                                                       >  1:1459964/1‑150
        CGATTCGCCACAGCAGCGGCTGGGCGAGATCCAGAAGCTGCTGGAGCGGATTCAGGGGGAGTTGTTCGCCTGATGGTTCTGTATTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGATAAGCGCGATCCCGTGCGTAGGAGC                                                                                                                                                                                     <  2:43388/150‑1
          ATTCGCCACAGCAGCGGCTGGGCGAGATCCAGAAGCTGCTGGAGCGGATTCAGGGGGAGTTGTTCGCCTGATGGTTCTGTATTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGATAAGCGCGATCCCGTGCGTAGGAGCGG                                                                                                                                                                                   <  2:57084/150‑1
           TTCGCCACAGCAGCGGCTGGGCGAGATCCAGAAGCTGCTGGAGCGGATTCAGGGGGAGTTGTTCGCCTGATGGTTCTGTATTGCCTGCGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGATAAGCGCGATCCCGTGCGTAGGAGCGGG                                                                                                                                                                                  <  1:469775/150‑1
            TCGCCACAGCAGCGGCTGGGCGAGATCCAGAAGCTGCTGGAGCGGATTCAGGGGGAGTTGTTCGCCTGATGGTTCTGTATTGCCTGTGCCGGCCTATCCCCGGGTAAACCCGCTCCTCCGATTACCGCGATCCCGTGCGTAGGAGCTGGT                                                                                                                                                                                 <  1:573448/150‑1
               CCACAGCAGCGGCTGGGCGAGATCCAGAAGCTGCTGGAGCGGATTCAGGGGGAGTTGTTCGCCTGATGGTTCTGTATTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGATAAGCGCGATCCCGTGCGTAGGAGCG                                                                                                                                                                                    >  1:2004476/1‑144
               CCACAGCAGCGGCTGGGCGAGATCCAGAAGCTGCTGGAGCGGATTCAGGGGGAGTTGTTCGCCTGATGGTTCTGTATTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGATAAGCGCGATCCCGTGCGTAGGAGCG                                                                                                                                                                                    <  2:2004476/144‑1
               CCACAGCAGCGGCTGGGCGAGATCCAGAAGCTGCTGGAGCGGATTCAGGGGGAGTTGTTCGCCTGATGGTTCTGTATTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGATAAGCGCGATCCCGTGCG                                                                                                                                                                                            >  1:2170133/1‑136
               CCACAGCAGCGGCTGGGCGAGATCCAGAAGCTGCTGGAGCGGATTCAGGGGGAGTTGTTCGCCTGATGGTTCTGTATTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGATAAGCGCGATCCCGTGCG                                                                                                                                                                                            <  2:2170133/136‑1
               CCACAGCAGCGGCTGGGCGAGATCCAGAAGCTGCTGGAGCGGATTCAGGGGGAGTTGTTCGCCTGATGGTTCTGTATTGACTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGATAAGCGCGATCCCGTGCGTAGGAGCGGGTTTA                                                                                                                                                                              <  1:1976041/150‑1
                CACAGCAGCGGCTGGGCGAGATCCAGAAGCTGCTGGAGCGGATTCAGGGGGAGTTGTTCGCCTGATGGTTCTGTATTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGATAAGCGCGATCCCGTGCGTAGGAGCGGGTTTAC                                                                                                                                                                             <  1:2087104/150‑1
                CACAGCAGCGGCTGGGCGAGATCCAGAAGCTGCTGGAGCGGATTCAGGGGGAGTTGTTCGCCTGATGGTTCTGTATTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGATAAGCGCGATCCCGTGCGTAGGAGCGG                                                                                                                                                                                   >  2:2265045/1‑144
                CACAGCAGCGGCTGGGCGAGATCCAGAAGCTGCTGGAGCGGATTCAGGGGGAGTTGTTCGCCTGATGGTTCTGTATTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGATAAGCGCGATCCCGTGCGTAGGAGCGG                                                                                                                                                                                   <  1:2265045/144‑1
                 ACAGCAGCGGCTGGGCGAGATCCAGAAGCTGCTGGAGCGGATTCAGGGGGAGTTGTTCGCCTGATGGTTCTGTATTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTTCTACGATAAGCGCGATCCCGTGCGTAGGAGCGGGTTTACC                                                                                                                                                                            <  1:2299545/150‑1
                  CAGCAGCGGCTGGGCGAGATCCAGAAGCTGCTGGAGCGGATTCAGGGGGAGTTGTTCGCCTGATGGTTCTGTATTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGATAAGCGCGATCCCGTGCGTAGGAGCGGGTTTACCC                                                                                                                                                                           <  2:1264862/150‑1
                         GGCTGGGCGAGATCCAGAAGCTGCTGGAGCGGATTCAGGGGGAGTTGTTCGCCTGATGGTTCTGTATTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGATAAGCGCGATCCCGTGCGTAGGAGCGGGTTTACCCGCGAATA                                                                                                                                                                    <  2:641590/150‑1
                          GCTGGGCGAGATCCAGAAGCTGCTGGAGCGGATTCAGGGGGAGTTGTTCGCCTGATGGTTCTGTATTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGATAAGCGCGATCCCGTGCGTAGGAGCGGGTTTACCCGCGAATAG                                                                                                                                                                   <  2:1459964/150‑1
                          GCTGGGCGAGATCCAGAAGCTGCTGGAGCGGATTCAGGGGGAGTTGTTCGCCTGATGGTTCTGTATTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGATAAGCGCGATCCCGTGCGTAGGAGCGGGTTTACCCGCGAATAG                                                                                                                                                                   <  1:1137395/150‑1
                            TGGGCGAGATCCAGAAGCTGCTGGAGCGGATTCAGGGGGAGTTGTTCGCCTGATGGTTCTGTATTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGATAAGCGCGATCCCGTGCGTAGGAGCGGGTTTACCCGCGAATAGGC                                                                                                                                                                 <  2:1989651/150‑1
                                  AGATCCAGAAGCTGCTGGAGCGGATTCAGGGGGAGTTGTTCGCCTGATGGTTCTGTATTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGATAAGCGCGATCCCGTGCGTAGGAGCGGGTTTACCC                                                                                                                                                                           <  2:1466660/134‑1
                                  AGATCCAGAAGCTGCTGGAGCGGATTCAGGGGGAGTTGTTCGCCTGATGGTTCTGTATTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGATAAGCGCGATCCCGTGCGTAGGAGCGGGTTTACCC                                                                                                                                                                           >  1:1466660/1‑134
                                      CCAGAAGCTGCTGGAGCGGATTCAGGGGGAGTTGTTCGCCTGATGGTTCTGTATTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGATAAGCGCGATCCCGTGCGTAGGAGCGGGTTTACCCGC                                                                                                                                                                         <  2:510265/132‑1
                                      CCAGAAGCTGCTGGAGCGGATTCAGGGGGAGTTGTTCGCCTGATGGTTCTGTATTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGATAAGCGCGATCCCGTGCGTAGGAGCGGGTTTACCCGC                                                                                                                                                                         >  1:510265/1‑132
                                       CAGAAGCTGCTGGAGCGGATTCAGGGGGAGTTGTTCGCCTGATGGTTCTGTATTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGATAAGCGCGATCCCGTGCGTAGGAGCGGGTTTACCCGCGAATAGGCC                                                                                                                                                                >  2:1372418/1‑140
                                       CAGAAGCTGCTGGAGCGGATTCAGGGGGAGTTGTTCGCCTGATGGTTCTGTATTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGATAAGCGCGATCCCGTGCGTAGGAGCGGGTTTACCCGCGAATAGGCC                                                                                                                                                                <  1:1372418/140‑1
                                                                                         TATTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGATAAGCGCGATCCCGTGCGTAG                                                                                                                                                                                         <  1:2243232/65‑1
                                                                                         TATTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGATAAGCGCGATCCCGTGCGTAG                                                                                                                                                                                         >  2:2243232/1‑65
                                                                                              CCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGATAAGCGCGATCCCGTGCGTAG                                                                                                                                                                                         >  2:113506/1‑60
                                                                                              CCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGATAAGCGCGATCCCGTGCGTAG                                                                                                                                                                                         <  1:113506/60‑1
                                                                                                TGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGATAAGCGCGATCCCGTGCGTAG                                                                                                                                                                                         <  2:346395/58‑1
                                                                                                TGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGATAAGCGCGATCCCGTGCGTAG                                                                                                                                                                                         >  1:346395/1‑58
                                                                                                             TCGCGGGTAAACCCGCTCCTACGATAAGCGCGATCCCGTGCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTC                                                                                           >  2:1532879/1‑139
                                                                                                             TCGCGGGTAAACCCGCTCCTACGATAAGCGCGATCCCGTGCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTC                                                                                           <  1:1532879/139‑1
                                                                                                                      AACCCGCTCCTACGATAAGCGCGATCCCGTGCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCCCAGCCGCTGCTGTGGCG                                                                       >  1:2116926/1‑150
                                                                                                                        CCCGCTCCTACGATAAGCGCGATCCCGTGCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCCCAGCCGCTGCTGTGGCGAA                                                                     >  2:918614/1‑150
                                                                                                                         CCGCTCCTACGATAAGCGCGATCCCGTGCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCCCAGCCGCTGCTGTGGCGAAT                                                                    >  2:2034536/1‑150
                                                                                                                         CCGCTCCTACGATAAGCGCGATCCCGTGCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCCCAGCCGCTGCTGTGGCGAAT                                                                    >  1:1885778/1‑150
                                                                                                                         CCGCTCCTACGATAAGCGCGATCCCGTGCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAA                                                                                                                                  >  1:1774336/1‑88
                                                                                                                         CCGCTCCTACGATAAGCGCGATCCCGTGCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAA                                                                                                                                  <  2:1774336/88‑1
                                                                                                                         CCGCTCCTACGATAAGCGCGATCCCGTGCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGC                                                                                                                                     >  1:1588493/1‑85
                                                                                                                         CCGCTCCTACGATAAGCGCGATCCCGTGCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGC                                                                                                                                     <  1:1164211/85‑1
                                                                                                                         CCGCTCCTACGATAAGCGCGATCCCGTGCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGC                                                                                                                                     <  2:1588493/85‑1
                                                                                                                         CCGCTCCTACGATAAGCGCGATCCCGTGCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGC                                                                                                                                     >  2:1164211/1‑85
                                                                                                                          CGCTCCTACGATAAGCGCGATCCCGTGCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCCCAGCCGCTGCTGTGGCGAATC                                                                   <  2:1885778/150‑1
                                                                                                                           GCTCCTACGATAAGCGCGATCCCGTGCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCACTGAATCCGCTCCAGCAGCTTCTGGATCTCGCCCAGCCGCTGCTGTGGCGAATCG                                                                  >  1:337004/1‑150
                                                                                                                             TCCTACGATAAGCGCGATCCCGTGCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGG                                                                                                >  1:641028/1‑118
                                                                                                                             TCCTACGATAAGCGCGATCCCGTGCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGG                                                                                                <  2:641028/118‑1
                                                                                                                             TCCTACGATAAGCGCGATCCCGTGCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCACTGAATCCGCTCCAGCAGCTTCTGGATCTCGCCCAGCCGCTGCTGTGGCGAATCGAG                                                                <  2:337004/150‑1
                                                                                                                                   GATAAGCGCGATCCCGTGCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCCCAGCCGCTGCTGTGGCGAATCGAGGGTCAG                                                          >  1:1654465/1‑150
                                                                                                                                                  GTGCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCCCAGCCGCTGCTGTGGCGAATCGAGGGTCAGCAGGTCCAGCTTGTg                                           <  2:1654465/150‑2
                                                                                                                                                     CGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAA                                                                                                                                                     <  1:196892/41‑1
                                                                                                                                                     CGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAA                                                                                                                                                     >  2:196892/1‑41
                                                                                                                                                       TAGGAGCGGGTTTACCCGCGCATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGC                                                                                                      >  2:398245/1‑86
                                                                                                                                                       TAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCCCAGCCGCTGCTGTGG                                                                         >  1:2072283/1‑115
                                                                                                                                                       TAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCCCAGCCGCTGCTGTGG                                                                         <  2:2072283/115‑1
                                                                                                                                                       TAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGC                                                                                                      <  1:398245/86‑1
                                                                                                                                                        AGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCCCAGCCGCTGCTGTGGCGAATCGAGGGTCAGCAGGTCCAGCTTGTCCTCTTa                                     <  1:2154078/150‑2
                                                                                                                                                           AGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCCCAGCCGCTGCTGTGGCGAATCGAGGGTCAGCAGGTCCAGCTTGTCCTCTTCCAT                                  >  2:1446618/1‑150
                                                                                                                                                               GGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCCCAGCCGCTGCTGTGGCGAATCGAGGGTCAGCAGGTCCAGCTTGTCCTCTTCCATGAAC                              <  1:918614/150‑1
                                                                                                                                                                GTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCCCAGCCGCTGCTGTGGCGAATCGAGGGTCAGCAGGTCCAGCTTGTCCTCTTCCATGAACG                             >  2:1512977/1‑150
                                                                                                                                                                GTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCCCAGCCGCTGCTGTGGCGAATCGAGGGTCAGCAGGTCCAGCTT                                              <  2:748042/133‑1
                                                                                                                                                                GTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCCCAGCCGCTGCTGTGGCGAATCGAGGGTCAGCAGGTCCAGCTT                                              >  1:748042/1‑133
                                                                                                                                                                    ACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCCCAGCCGCTGCTGTGG                                                                         <  2:1958409/102‑1
                                                                                                                                                                    ACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCCCAGCCGCTGCTGTGG                                                                         >  1:1958409/1‑102
                                                                                                                                                                     CCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCC                                                                                                                           <  2:79395/51‑1
                                                                                                                                                                     CCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCC                                                                                                                           >  1:79395/1‑51
                                                                                                                                                                      CCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCCCAGCCGCTGCTGTGGCGAATCGAGGGTCAGCAGGTCCAGCTTGTCCTCTTCCATGAACGGCAACA                       >  2:1394205/1‑150
                                                                                                                                                                      CCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCCCAGCCGCTGCTGTGGCGAATCGAGGGTCAGCAGGTCCAGCTTGTCCTCTTCCATGAACGGCAACA                       >  1:1139754/1‑150
                                                                                                                                                                      CCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCCCAGCCGCTGCTGTGGCGAATCGAGGGTCAGCAGGTCCAGCTTGTCCTCTTCCATGAA                               >  2:208836/1‑142
                                                                                                                                                                      CCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCCCAGCCGCTGCTGTGGCGAATCGAGGGTCAGCAGGTCCAGCTTGTCCTCTTCCATGAA                               <  1:208836/142‑1
                                                                                                                                                                      CCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCCCAGCCGCTGCTGTGGCGAATCGAG                                                                <  2:425433/109‑1
                                                                                                                                                                      CCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCCCAGCCGCTGCTGTGGCGAATCGAG                                                                >  1:425433/1‑109
                                                                                                                                                                       CGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCCCAGCCGCTGCTGTGGCGAATCGAGGGTCAGCAGGTCCAGCTTGTCCTCTTCCATGAACGGCAACAG                      >  1:980015/1‑150
                                                                                                                                                                          GAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCCCAGCCGCTGCTGTGGCGAATCGAGGGTCAGCAGGTCCAGCTTGTCCTCTTCCATGAACGGCAACAGGTA                   <  2:1289984/150‑1
                                                                                                                                                                           AATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCCCAGCCGCTGCTGTGGCGAATCGAGGGTCAGCAGGTCCAGCTTGTCCTCTTCCATGAACGGCAACAGGTAC                  >  1:2396819/1‑150
                                                                                                                                                                           AATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACACCCCCTGAATCCGCTCCAGCAGCTTCTGGATCGCGCCCAGCCGCTGCTGTGGCGAATCCAGGGTCAGCAGGTCCAGCTTGTCCTCTTCCATGAACGGCAACAGGTAC                  <  1:1264862/150‑1
                                                                                                                                                                                GCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCCCAGCCGCTGCTGTG                                                                          <  1:973151/89‑1
                                                                                                                                                                                GCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCCCAGCCGCTGCTGTG                                                                          >  2:973151/1‑89
                                                                                                                                                                                  CGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCCCAGCCGCTGCTGTGGCGAATCGAGGGTCAGCAGGTCCAGCTTGTCCTCTTCCATGAACGGC                           <  2:1405441/134‑1
                                                                                                                                                                                  CGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCCCAGCCGCTGCTGTGGCGAATCGAGGGTCAGCAGGTCCAGCTTGTCCTCTTCCATGAACGGC                           >  1:1405441/1‑134
                                                                                                                                                                                      ACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCCGCTTCTGGATCTCGCCCAGCCGCTGCTGTGGCGAATCGAGGGTCAGCAGGTCCAGCTTGTTCTCTTCCATGAACGGCAACAGGTACGCCAGCTGATT       >  2:859460/1‑150
                                                                                                                                                                                      ACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCCCAGCCGCTGCTGTGGCGAATCGAGGGTCAGCAGGTCCAGCTTGTCCTCTTCCATGAACGGCAACAGGTACGCCAGCTGATT       >  2:1065276/1‑150
                                                                                                                                                                                      ACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCCCAGCCGCTGCTGTGGCGAATCGAGGGTCAGCAGGTC                                                    >  2:308330/1‑105
                                                                                                                                                                                      ACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCCCAGCCGCTGCTGTGGCGAATCGAGGGTCAGCAGGTC                                                    <  1:308330/105‑1
                                                                                                                                                                                       CAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCTGCGTTGCGCTGCTGTGGCGAATCGAGGGTCAGCAGGTCCAGCTTGTCCTCTTCCATGAACGGCAACAGGTACGCCAGCTGATTG      <  1:43388/150‑1
                                                                                                                                                                                       CAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCCCAGCCGCTGCTGTGGCGAATCGAGGGTCAGCAGGTCCAGCTTGTCCTCTTCCATGAACGGCAACAGGTACGCCAGCTGATTG      <  2:980015/150‑1
                                                                                                                                                                                       CAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCCCAGCCGCTGCTGTGGCGAATCGAGGGTCAGCAGGTCCAGCTTGTCCTCTTCCATGAACGGCAACAGGTACGCCAGCTGATTG      <  1:1512977/150‑1
                                                                                                                                                                                         GGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCCCAGCCGCTGCTGTGGCGAATCGAGGGT                                                             >  1:1324823/1‑93
                                                                                                                                                                                         GGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCCCAGCCGCTGCTGTGGCGAATCGAGGGT                                                             <  2:1324823/93‑1
                                                                                                                                                                                           CAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCCCAGCCGCTGCTGTGGCGAATCGAGGGTCAGCAGGTCCAGCTTGTCCTCTTCCATGAACGGCAACAGGTACGCCAGCTGATTGGCCA  <  2:2396819/150‑1
                                                                                                                                                                                                                                                                                                                                                 
CTGACCCTCGATTCGCCACAGCAGCGGCTGGGCGAGATCCAGAAGCTGCTGGAGCGGATTCAGGGGGAGTTGTTCGCCTGATGGTTCTGTATTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGATAAGCGCGATCCCGTGCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5477327‑5477138
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtaggagcgggtttacccgcgaataggccggcacaggcaaTACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCCCAGCCGCTGCTGTGGCGAATCGAGGGTCAGCAGGTCCAGCTTGTCCTCTTCCATGAACGGCAACAGGTACGCCAGCTGATTGGCCA  >  NC_002947/5477237‑5477383

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.