New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5506609 =	40 (0.450)	14 (0.210)	11/188	NT	29.3%	intergenic (+20/‑179)	PP_4839/cycA	iron‑regulated membrane protein/D‑alanine/beta‑alanine/D‑serine/glycine permease
	?	NC_002947	5506680 =	37 (0.550)					intergenic (+91/‑108)	PP_4839/cycA	iron‑regulated membrane protein/D‑alanine/beta‑alanine/D‑serine/glycine permease

GGCTGCAGTCTTCTTGTCAGAGGTAGCCGGCTAGGCTAACACGCGCGTTCCAGATCGGGGCGCGACAGATCGACTCTGCATTTTCGGCTCAGCATTTCGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGCGGTCCCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5506786‑5506609 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtaggagcgggtttacccgcgaagaggccGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTGCAGCCTATGACGCAAACCTCACCCATAGCGACAGATGAACCGCACC  >  NC_002947/5506680‑5506827                                                                                                                                                                                                                                                                                                                                        GGCTGCAGTCTTCTTGTCAGAGGTAGCCGGCTAGGCTAACACGCGCGTTCCAGATCGGGGCGCGACAGATCGACTCTGCATTTTCGGCTCAGCATTTCGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGCGGTCCCTCG                                                                                                                                                                                  <  2:1106667/150‑1   CTGCAGTCTTCTTGTCAGAGGTAGCCGGCTAGGCTAACACGCGCGCTCACGGTCAAGGCGCGACTGTGCGACGCTGCATTTTCGGCTCAGCATTTCGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGCGGTCCCTCGTA                                                                                                                                                                                <  1:2091136/150‑1    TGCAGTCTTCTTGTCAGAGGTAGCCGGCTAGGCTAACACGCGCGTTCCAGATCGGGGCGCGACAGATCGACTCTGCATTTTCGGCTCAGCATTTCGCCTGTCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGCGGTCCCTCGTAG                                                                                                                                                                               >  2:306008/1‑150    TGCAGTCTTCTTGTCAGAGGTAGCCGGCTAGGCTAACACGCGCGTTCCAGATCGGGGCGCGACAGATCGACTCTGCATTTTCGGCTCAGCATTTCGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGCGGTCCCTCGTAG                                                                                                                                                                               <  2:2313102/150‑1        tTCTTCTTGTCAGAGGTCGCAGGCTAGGATAACACGCGCGTTCCAGATCGGGGCGCGACAGATCGACTCTGCATTTTCGGCTCAGCATTTCGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGCGGTCCCTCGTAGGAGC                                                                                                                                                                           <  2:737715/149‑1         TCTTCTTGTCAGAGGTAGCCGGCTAGGCTAACACGCGCGTTCCAGATCGGGGCGCGACAGATCGACTCTGCATTTTCGGCTCAGCATTTCGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGCGGTCCCTCGTAGGAGCG                                                                                                                                                                          >  2:851082/1‑150          CTTCTTGTCAGAGGTAGCCGGCTAGGCTAACACGCGCGTTCCAGATCGGGGCGCGACAGATCGACTCTGCATTTTCGGCTCAGCATTTCGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGCGGTCCCTCGTAGGAGCGG                                                                                                                                                                         <  1:1099061/150‑1          CTTCTTGTCAGAGGTAGCCGGCTAGGCTAACACGCGCGTTCCAGATCGGGGCGCGACAGATCGACTCTGCATTTTCGGCTCAGCATTTCGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGCGGTCCCTCGTAGGAGCGG                                                                                                                                                                         >  2:731717/1‑150          CTTCTTGTCAGAGGTAGCCGGCTAGGCTAACACGCGCGTTCCAGATCGGGGCGCGACAGATCGACTCTGCATTTTCGGCTCAGCATTTCGCCTGTACCGGCCTCTTCGCAGGTCAATCCGCTCCTACAACGCGGTCCCTCGTAGGAGCGG                                                                                                                                                                         <  1:1397238/150‑1           TTCTTGTCAGAGGTAGCCGGCTAGGCTAACACGCGCGTTCCAGATCGGGGCGCGACAGATCGACTCTGCATTTTCGGCTCAGCATTTCGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGCGGTCCCTCGTAGGAGCGGG                                                                                                                                                                        <  2:1299908/150‑1           TTCTTGTCAGAGGTAGCCGGCTAGGCTAACACGCGCGTTCCAGATCGGGGCGCGACAGATCGACTCTGCATTTTCGGCTCAGCATTTCGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGCGGTCCCTCGTAGGAGCGGG                                                                                                                                                                        <  1:731717/150‑1           TTCTTGTCAGAGGTAGCCGGCTAGGCTAACACGCGCGTTCCAGATCGGGGCGCGACAGATCGACTCTGCATTTTCGGCTCAGCATTTCGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGCGGTCCCTCGTAGGAGCGG                                                                                                                                                                         <  2:12792/149‑1           TTCTTGTCAGAGGTAGCCGGCTAGGCTAACACGCGCGTTCCAGATCGGGGCGCGACAGATCGACTCTGCATTTTCGGCTCAGCATTTCGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGCGGTCCCTCGTAGGAGCGG                                                                                                                                                                         >  1:12792/1‑149            TCTTGTCAGAGGTAGCCGGCTAGGCTAACACGCGCGTTCCAGATCGGGGCGCGACAGATCGACTCTGCATTTTCGGCTCAGCATTTCGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGCGGTCCCTCGTAGGAGCGGGT                                                                                                                                                                       <  2:39064/150‑1            TCTTGTCAGAGGTAGCCGGCTAGGCTAACACGCGCGTTCCAGATCGGGGCGCGACAGATCGACTCTGCATTTTCGGCTCAGCATTTCGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGCGGTCCCTCGTAGGAGCGGGT                                                                                                                                                                       <  1:723144/150‑1                 TCAGAGGTAGCCGGCTAGGCTAACACGCGCGTTCCAGATCGGGGCGCGACAGATCGACTCTGCATTTTCGGCTCAGCATTTCGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGCGGTCCCTCGTAGGAGCGGGTTTACC                                                                                                                                                                  >  2:493238/1‑150                 TCAGAGGTAGCCGGCTAGGCTAACACGCGCGTTCCAGATCGGGGCGCGACAGATCGACTCTGCATTTTCGGCTCAGCATTTCGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGCGGTCCCTCGTAGGAGCGGGGTTACC                                                                                                                                                                  >  1:520161/1‑150                    GAGGTAGCCGGCTAGGCTAACACGCGCGTTCCAGATCGGGGCGCGACAGATCGACTCTGCATTTTCGGCTCAGCATTTCGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGCGGTCCCTCGTAGGAGCGGGTTTACCCGC                                                                                                                                                               >  1:747795/1‑150                     AGGTAGCCGGCTAGGCTAACACGCGCGTTCCAGATCGGGGCGCGACAGATCGACTCTGCATTTTCGGCTCAGCATTTCGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGCGGTCCCTCGTAGGA                                                                                                                                                                             <  2:698315/135‑1                     AGGTAGCCGGCTAGGCTAACACGCGCGTTCCAGATCGGGGCGCGACAGATCGACTCTGCATTTTCGGCTCAGCATTTCGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGCGGTCCCTCGTAGGA                                                                                                                                                                             >  1:698315/1‑135                       GTAGCCGGCTAGGCTAACACGCGCGTTCCAGAGCGGGGGGCGACAGATCGACTCTGCATTTTCGGCTCAGCATTTCGCCTGTACCGGCCTCTTCGCGGGTAANCCCGCTNCTACAACGCGGTCCCTCGTAGGAGCGGGTTTACCCGCGAA                                                                                                                                                            <  1:1331798/150‑1                            CGGCTAGGCTAACACGCGCGTTCCAGATCGGGGCGCGACAGATCGACTCTGCATTTTCGGCTCAGCATTTCGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGCGGTCCCTCGTAGGAGCGGGTTTACCCGCGAAGAGGC                                                                                                                                                       <  1:710350/150‑1                                    CTAACACGCGCGTTCCAGATCGGGGCGCGACAGATCGACTCTGCATTTTCGGCTCAGCATTTCGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGCGGTCCCTCGTAGGAGCGGGTTTACCCGCGAAGA                                                                                                                                                          >  1:2266833/1‑139                                    CTAACACGCGCGTTCCAGATCGGGGCGCGACAGATCGACTCTGCATTTTCGGCTCAGCATTTCGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGCGGTCCCTCGTAGGAGCGGGTTTACCCGCGAAGA                                                                                                                                                          <  2:2266833/139‑1                                                                                         TCAGCATTTCGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGCGGTCCCTCGTAGGAGCGGGTTTACCCGCGAAGA                                                                                                                                                          <  2:1895287/86‑1                                                                                         TCAGCATTTCGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGCGGTCCCTCGTAGGAGCGGGTTTACCCGCGAAGA                                                                                                                                                          >  1:1895287/1‑86                                                                                             CATTTCGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGCGGTCCCTCGTAGGAGCGGGT                                                                                                                                                                       <  1:2123030/69‑1                                                                                             CATTTCGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGCGGTCCCTCGTAGGAGCGGGT                                                                                                                                                                       >  2:2123030/1‑69                                                                                                                         GTAAACCCGCTCCTACAACGCGGTCCCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGAC                                                          >  2:1060397/1‑150                                                                                                                             ACCCGCTCCTACAACGCGGTCCCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGT                                                                                   >  2:506816/1‑121                                                                                                                             ACCCGCTCCTACAACGCGGTCCCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGT                                                                                   <  1:506816/121‑1                                                                                                                             ACCCGCTCCTACAACGCGGTCCCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTC                                                                                                          >  1:2078148/1‑98                                                                                                                             ACCCGCTCCTACAACGCGGTCCCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTC                                                                                                          <  2:2078148/98‑1                                                                                                                              CCCGCTCCTACAACGCGGTCCCTCGTAGGAGCGGTTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTATGACAcgta                                                     >  2:1576206/1‑146                                                                                                                              CCCGCTCCTACAACGCGGTCCCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAA                                                     >  2:1371208/1‑150                                                                                                                              CCCGCTCCTACAACGCGGTCCCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCAGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAA                                                     >  1:749949/1‑150                                                                                                                               CCGCTCCTACAACGCGGTCCCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGA                                                                                           <  2:916178/111‑1                                                                                                                               CCGCTCCTACAACGCGGTCCCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGA                                                                                           >  1:916178/1‑111                                                                                                                                CGCTCCTACAACGCGGTCCCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGA                                                   >  1:2019376/1‑150                                                                                                                                  CTCCTACAACGCGGTCCCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACT                                                 <  2:2019376/150‑1                                                                                                                                   TCCTACAACGCGGTCCCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTG                                                >  2:2175005/1‑150                                                                                                                                    CCTACAACGCGGTCCCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTGC                                               <  1:2175005/150‑1                                                                                                                                                    TCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTGCAGCCTATGACGCAAAC                               <  1:1060397/150‑1                                                                                                                                                        AGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTGCAGCCTATGACGCAAACCTCA                           <  1:1106667/150‑1                                                                                                                                                        AGGAGCGGGTGTACCCGCGAAGAGGCCGCTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGGCGGCTACCTCTGACAAGAAGACTGCAGCCTATGACGCAAACCTCA                           <  2:1331798/150‑1                                                                                                                                                         GGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTGCAGCCTATGACGCAAACCTCAC                          >  2:54607/1‑150                                                                                                                                                         GGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTGCAGCCTATGACGCAAACCTCAC                          <  1:1719684/150‑1                                                                                                                                                         GGAGCGGGTTTACCCGCGAAGAGGCCCGTACAGGCGAAATGCTGAGCTGAAAATGCAGAGTCAATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTGCAGCCTATGACGCAAACCTCAC                          <  1:1576206/150‑1                                                                                                                                                          GAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGGACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTGCAGCCTATGACGCAAACCTCAC                          <  2:2013231/149‑1                                                                                                                                                          GAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGCACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTGCAGCCTATGACGCAAACCTCAC                          >  1:2013231/1‑149                                                                                                                                                            GCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTGCAGCCTATGACGCAAAC                               <  1:259772/142‑1                                                                                                                                                            GCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTGCAGCCTATGACGCAAAC                               >  2:259772/1‑142                                                                                                                                                            GCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGC                                                                             <  2:1723590/96‑1                                                                                                                                                            GCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGC                                                                             >  1:1723590/1‑96                                                                                                                                                                GTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTGCAGCCTATGACGCAAACCTCACCCATAGC                   <  1:1334727/150‑1                                                                                                                                                                     CCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTGCAGCCTATGAC                                     <  2:1650510/127‑1                                                                                                                                                                     CCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTGCAGCCTATGAC                                     >  1:1650510/1‑127                                                                                                                                                                      CCGCGAAGAGGCCTGTACAGGCGAAATTCTGATCCGAAAATGCAGAGTAGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCTGCTACCTCTGACAAGAAGACTGCAGCCTATGACGCAAACCTCACCCATAGCGACAGA             <  2:749949/150‑1                                                                                                                                                                      CCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTGCAGCCTATGACGCAAACCTCACCCATAGCGACAGA             >  1:1100140/1‑150                                                                                                                                                                      CCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGC                                                                             >  2:1256731/1‑86                                                                                                                                                                      CCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGC                                                                             <  1:1256731/86‑1                                                                                                                                                                      CCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGACGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGAAACGCGCGTGTTAGCCTAGCCGTCTACCTCTGACAAGAAGAATGCAGCCTATGACGCAAACCTCACCCATAGCGACAGA             >  1:720449/1‑150                                                                                                                                                                          GAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTGCAGCCTATGACGCAAACCTCACCCATAGCGACAGATGAA         >  1:844889/1‑150                                                                                                                                                                               GGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTGCAGCCTATGACGCAAACCTCACCCATAGCGACAGATGAACCGCA    <  2:1815574/150‑1                                                                                                                                                                                GCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGCGTCTATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTGCAGCCTATGACGCAAACCTCACCCATAGCGACAGATGAACCGCAC   <  1:737715/150‑1                                                                                                                                                                                GCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTGCAGCCTATGA                                      <  1:1457742/115‑1                                                                                                                                                                                GCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTGCAGCCTATGA                                      >  2:1457742/1‑115                                                                                                                                                                                 CCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTGCAGCCTATGACGCAAACCTCACCCATAGCGACAGATGAACCGCACC  <  2:1100140/150‑1                                                                                                                                                                                                                                                                                                                                        GGCTGCAGTCTTCTTGTCAGAGGTAGCCGGCTAGGCTAACACGCGCGTTCCAGATCGGGGCGCGACAGATCGACTCTGCATTTTCGGCTCAGCATTTCGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGCGGTCCCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5506786‑5506609 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtaggagcgggtttacccgcgaagaggccGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTGCAGCCTATGACGCAAACCTCACCCATAGCGACAGATGAACCGCACC  >  NC_002947/5506680‑5506827

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.