| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5634190 = | 96 (1.080) | 7 (0.080) | 6/238 | NT | 6.9% | coding (3669/3954 nt) | putA | proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase |
| ? | NC_002947 | 5634227 = | 95 (1.110) | coding (3706/3954 nt) | putA | proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase | |||||
CCGGCACGCTTGGCCACCTGCTGGCATACGCCGCGCAGCTGGTCCGAGTCGCCATGGTGGATCACGGCGTCGAACGCCACTTCATCCTTGTTCCAGTCCGCGACCAGCTTCACCTTGGCCTGCAGCTCACGCGGCAGGCGGGCGCGCAGGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5634342‑5634190‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccAAGGTGAAGCTGGTCGCGGACTGGAACAAGGATGAAGTGGCGTTCGACGCCGTGATCCACCATGGCGACTCGGACCAGCTGCGCGGCGTATGCCAGCAGGTGGCCAAGCGTGCCGGGGCGATCGTTGGGGTGCACGGGCTGTCCAGC > NC_002947/5634227‑5634373 CCGGCACGCTTGGCCACCTGCTGGCATACGCCGCGCAGCTGGTCCGAGTCGCCATGGTGGATCACGGCGTCGAACGCCACTTCATCCTTGTTCCAGTCCGCGACCAGCTTCACCTTGGCCTGCAGCTCACGCGGCAGGCGGGCGCGCAGG < 1:1403224/150‑1CCGGCACGCTTGGCCACCTGCTGGCATACGCCGCGCAGCTGGTCCGAGTCGCCATGGTGGATCACGGCGTCGAACGCCACTTCATCCTTGTTCCAGTCCGCGACCAGCTTCACCTTGGCCTGCAGCTCACGCGGCAGGCGGGCGCGCAGG > 1:1443182/1‑150 CGGCACGCTTGGCCACCCGCTGGCATACGCCGCGCAGCTGGTCCGAGTCGCCATGGTGGATCACGGCGTCGAACGCCACTTCATCCTTGTTCCAGTCCGCGACCAGCTTCACCTTGGCCTGCAGCTCACGCGGCAGGCGGGCGCGCAGGG < 2:2001769/150‑1 ATACGCCGCGCAGCTGGTCCGAGTCGCCATGGTGGATCACGGCGTCGAACGCCACTTCATCCTTGTTCCAGTCCGCGACCAGCTTCACCTTGGCCTGCAGCTCACGCGGCAGGCGGGCGCGCAGG > 1:2136655/1‑125 ATACGCCGCGCAGCTGGTCCGAGTCGCCATGGTGGATCACGGCGTCGAACGCCACTTCATCCTTGTTCCAGTCCGCGACCAGCTTCACCTTGGCCTGCAGCTCACGCGGCAGGCGGGCGCGCAGG < 2:2136655/125‑1 AGCTGGTCCGAGTCGCCATGGTGGATCACGGCGTCGAACGCCACTTCATCCTTGTTCCAGTCCGCGACCAGCTTCACCTTGGCCTGCAGCTCACGCGGCAGGCGGGCGCGCAGG > 1:1383156/1‑114 AGCTGGTCCGAGTCGCCATGGTGGATCACGGCGTCGAACGCCACTTCATCCTTGTTCCAGTCCGCGACCAGCTTCACCTTGGCCTGCAGCTCACGCGGCAGGCGGGCGCGCAGG < 2:1383156/114‑1 GAGTCGCCATGGTGGATCACGGCGTCGAACGCCACTTCATCCTTGTTCCAGTCCGCGACCAGCTTCACCTTGGCCTGCAGCTCACGCGGCAGGCGGGCGCGCAGG < 1:958320/105‑1 GAGTCGCCATGGTGGATCACGGCGTCGAACGCCACTTCATCCTTGTTCCAGTCCGCGACCAGCTTCACCTTGGCCTGCAGCTCACGCGGCAGGCGGGCGCGCAGG > 2:958320/1‑105 CCTTGGCCTGCAGCTCACGCGGCAGGCGGGCGCGCAGGGCCAAGGTGAAGCTGGTCGCGGACTGGAACAAGGATGAAGTGGCGTTCGACGCCGTGATCCACCATGGCGACTCGGACCAGCTGCGCGGCGTATGCCAGCAGGTGGCCAA > 1:515782/1‑148 CCTTGGCCTGCAGCTCACGCGGCAGGCGGGCGCGCAGGGCCAAGGTGAAGCTGGTCGCGGACTGGAACAAGGATGAAGTGGCGTTCGACGCCGTGATCCACCATGGCGACTCGGACCAGCTGCGCGGCGTATGCCAGCAGGTGGCCAA < 2:515782/148‑1 CTTGGCCTGCAGCTCACGCGGCAGGCGGGCGCGCAGGGCCAAGGTGAAGCTGGTCGCGGACTGGAACAAGGATGAAGTGGCGTTCGACGCCGTGATCCACCATGGCGACTCGGACCAGATGCGCGGCGTATGCCAGCAGGTGGCCAAGCG > 1:933878/1‑150 CTTGGCCTGCAGCTCACGCGGCAGGCGGGCGCGCAGGGCCAAGGTGAAGCTGGTCGCGGACTGGAACAAGGATGAAGTGGCGTTCGACGCCGTGATCCACCATGGCGACTCGGACCAG < 2:2209100/118‑1 CTTGGCCTGCAGCTCACGCGGCAGGCGGGCGCGCAGGGCCAAGGTGAAGCTGGTCGCGGACTGGAACAAGGATGAAGTGGCGTTCGACGCCGTGATCCACCATGGCGACTCGGACCAG > 1:2209100/1‑118 CTGCAGCTCACGCGGCAGGCGGGCGCGCNGGGCCAAGGTGAAGCNGNTNGCGGACTGGAACAAGGATGAAGTGGCGTTCGACGCCGTGATCCACCATGGCGACTCGGACCAGCTGCGCGGCGTATGCCAGCAGGTGGCCAAGCGTGCCGG > 1:1273574/1‑150 cGCAGGCGTGCGCGCATGGCCAAGGTGAAGCTGGTCGCGGACTGGAACAAGGATGAAGTGGCGTTCGACGCCGTGATCCACCATGGCGTCGCTGTCCAGCTGCGCGGCGTATGCCAGCAGGTGGCCAAGCGTGCCGGGGCGATCGTTGGG < 2:933878/149‑1 GCCAAGGTGAAGCTGGTCGCGGACTGGAACAAGGATGAAGTGGCGTTCGACGCCGTGATCCACCATGGCGACTCGGACCAGCTGCGCGGCGTATGCCAGCAGGTGGCCAAGCGTGCCGGGGCGATCGTTGGGGTGCACGGGCTGTCCAGC > 1:2352406/1‑150 GCCAAGGTGAAGCTGGTCGCGGACTGGAACAAGGATGAAGTGGCGTTCGACGCCGTGATCCACCATGGCGACTCGGAC < 1:750528/78‑1 GCCAAGGTGAAGCTGGTCGCGGACTGGAACAAGGATGAAGTGGCGTTCGACGCCGTGATCCACCATGGCGACTCGGAC > 2:750528/1‑78 GCCAAGGTGAAGCTGGTCGCGGACTGGAACAAGGATGAAGTGGAGTTCGGAGCAGTTGCGGACCAGTGCGACGCGGACCAGCTGCGCGGCGTATGCCAGCAGGTGGCCAAGCGTGCCGGGGCGATCGTTGGGGTGCACGGGCTGTCCAGC < 1:285251/150‑1 GCCAAGGTGAAGCTGGTCGCGGACTGGAACAAGGATGAAGTG > 1:362296/1‑42 GCCAAGGTGAAGCTGGTCGCGGACTGGAACAAGGATGAAGTG < 2:362296/42‑1 CAAGGTGAAGCTGGTCGCGGACTGGAACAAGGATGAAGTGGCGTTCGACGCCGTGATCCACCATGGCGACTCGGACCAGCTGCGCGGCGTATGCCAGCAGGTGGCCAAGCGTGCCGGGGCGATCGTTGGGGTGCACG > 1:992330/1‑137 CAAGGTGAAGCTGGTCGCGGACTGGAACAAGGATGAAGTGGCGTTCGACGCCGTGATCCACCATGGCGACTCGGACCAGCTGCGCGGCGTATGCCAGCAGGTGGCCAAGCGTGCCGGGGCGATCGTTGGGGTGCACG < 2:992330/137‑1 CCGGCACGCTTGGCCACCTGCTGGCATACGCCGCGCAGCTGGTCCGAGTCGCCATGGTGGATCACGGCGTCGAACGCCACTTCATCCTTGTTCCAGTCCGCGACCAGCTTCACCTTGGCCTGCAGCTCACGCGGCAGGCGGGCGCGCAGGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5634342‑5634190‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccAAGGTGAAGCTGGTCGCGGACTGGAACAAGGATGAAGTGGCGTTCGACGCCGTGATCCACCATGGCGACTCGGACCAGCTGCGCGGCGTATGCCAGCAGGTGGCCAAGCGTGCCGGGGCGATCGTTGGGGTGCACGGGCTGTCCAGC > NC_002947/5634227‑5634373 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |