New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5743404	74 (0.840)	18 (0.230)	13/220	NT	20.3%	intergenic (‑181/+66)	fbp/glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase
	?	NC_002947	= 5743432	75 (0.950)					intergenic (‑209/+38)	fbp/glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase

GGGATGAAAAACCCACGCAGTTTACAGGGAGAGTGACGGGCTAGCGAGTGATGAGACTCGCCACGGCTCTCAGACGGCACAATAGGTCGGTAGTTCAGCCTTCGCCAGGCCGGTGGTCTGGTTGTGTGTCCATTCGCGGGCGCGCTCGCTCCCACAGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5743246‑5743404 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgctcccacaggtGTCTCGCAAGCTTCAAGGCTTGCGCTGTACCTGTGGGAGCGAGCGCGCCCGCGAATGGACACACAACCAGACCACCGGCCTGGCGAAGGCTGAACTACCGACCTATTGTGCCGTCTGAGAGCCGTGGCGAGTCTCATCACTCGCTAGC  <  NC_002947/5743432‑5743285                                                                                                                                                                                                                                                                                                                     GGGATGAAAAACCCACGCAGTTTACAGGGAGAGTGACGGGCTAGCGAGTGATGAGACTCGCCACGGCTCTCAGACGGCACAATAGGTCGGTAGTTCAGCCTTCGCCAGGCCGGTGGTCTGGTTGTGTGTCCATTCGCGGGCGCGCTCGCT                                                                                                                                                               <  2:2252291/150‑1   GATGAAAAACCCACGCAGTTTACAGGGAGAGTGACGGGCTAGCGAGTGATGAGACTCGCCACGGCTCTCAGCCGGCACAATAGGTCGGTAGTTCAGCCTTCGCCAGGCCGGTGGTCTGGTTGTGTGTCCATTCGCGGGCGCGCTCGCTCC                                                                                                                                                             >  2:776570/1‑150   GATGAAAAACCCACGCAGTTTACAGGGAGAGTGACGGGCTAGCGAGTGATGAGACTCGCCACGGCTCTCAGACGGCACAATAGGTCGGTAGTTCAGCCTTCGCCAGGCCGGTGGTCTGGTTGTGTGTCCATTCGCGGGCGCGCTCGCTCC                                                                                                                                                             >  2:1893858/1‑150   GATGAAAAACCCACGCAGTTTACAGGGAGAGTGACGGGCTAGCGAGTGATGAGACTCGCCACGGCTCTCAGACGGCACAATAGGTCGGTAGTTCAGCCTTCGCCAGGCCGGTGGTCTGGTTGTGTGTCCATTCGCGGGCGCGCTCGCTCC                                                                                                                                                             >  1:1452672/1‑150    ATGAAAAACCCACGCAGTTTACAGGGAGAGTGACGGGCTAGCGAGTGATGAGACTCGCCACGGCTCTCAGACGGCACAATAGGTCGGTAGTTCAGCCTTCGCCAGGCCGGTGGTCTGGTTGTGTGTCCATTCGCGGGCGCGCTCGCTCCC                                                                                                                                                            >  2:184164/1‑150     TGAAAAACCCACGCAGTTTACAGGGAGAGTGACGGGCTAGCGAGTGATGACACTCGCCACGGCTCTCAGACGGCACAAGAGGTCGGTAGTTCAGCCTTCGCCAGGCCGGTGGTCTGGTTGTGTGTCCATTCGCGGGCGCGCTCGCTCCCA                                                                                                                                                           <  2:807430/150‑1       AAAAACCCACGCAGTTTACAGGGAGAGTGACGGGCTAGCGAGTGATGAGACTCGCCACGGCTCTCAGACGGCACAATAGGTCGGTAGTTCAGCCTTCGCCAGGCCGGTGGTCTGGTTGTGTGTCCATTCGCGGGCGCGCTCGCTCCCACA                                                                                                                                                         <  2:117398/150‑1        AAAACCCACGCAGTTTACAGGGAGAGTGACGGGCTAGCGAGTGATGAGACTCGCCACGGCTCTCAGACGGCACAATAGGTCGGTAGTTCAGCCTTCGCCAGGCCGGTGGTCTGGTTGTGTGTCCATTCGCGGGCGCGCTCGCTCCCACAG                                                                                                                                                        <  2:491011/150‑1         AAACCCACGCAGTTTACAGGGAGAGTGACGGGCTAGCGAGTGATGAGACTCGCCACGGCTCTCAGACGGCACAATAGGTCGGTAGTTCAGCCTTCGCCAGGCCGGTGGTCTGGTTGTGTGTCCATTCGCGGGCGCGCTCGCTCCCACAGG                                                                                                                                                       >  1:248075/1‑150          AACCCACGCAGTTTACAGGGAGAGTGACGGGCTAGCGAGTGATGAGACTCGCCACGGCTCTCAGACGGCACAATAGGTCGGTAGTTCAGCCTTCGCCAGGCCGGTGGTCTGGTTGTGTGTCCATTCGCGGGCGCGCTCGCTCCCACAGGT                                                                                                                                                      <  2:438150/150‑1             CCACGCAGTTTACAGGGAGAGTGACGGGCTAGCGAGTGATGAGACTCGCCACGGCTCTCAGACGGCACAATAGGTCGGTAGTTCAGCCTTCGCCAGGCCGGTGGTCTGGTTGTGTGTCCATTCGCGGGCGCGCTCGCTCCCACAGGTGTC                                                                                                                                                   >  1:423494/1‑150               ACGCAGTTTACAGGGAGAGTGACGGGCTAGCGAGTGATGAGACTCGCCACGGCTCTCAGACGGCACAATAGGTCGGTAGTTCAGCCTTCGCCAGGCCGGTGGTCTGGTTGTGTGTCCGTTCGCGGGCACGCCCGCTCCCACAGGTGTCTC                                                                                                                                                 >  1:1727449/1‑150               ACGCAGTTTACAGGGAGAGTGACGGGCTAGCGAGTGATGAGACTCGCCACGGCTCTCAGACGGCACAATAGGTCGGTAGTTCAGCCTTCGCCAGGCCGGTGGTCTGGTTGTGTGTCCATTCGCGGGCGCGCTCGCTCCCA                                                                                                                                                           >  2:711776/1‑140               ACGCAGTTTACAGGGAGAGTGACGGGCTAGCGAGTGATGAGACTCGCCACGGCTCTCAGACGGCACAATAGGTCGGTAGTTCAGCCTTCGCCAGGCCGGTGGTCTGGTTGTGTGTCCATTCGCGGGCGCGCTCGCTCCCA                                                                                                                                                           <  1:711776/140‑1                                       GGCTAGCGAGTGATGAGACTCGCCACGNCTCTCAGACGGCNCAATAGNTCGGTAGTTCAGCCTTCGCCAGCCCGGCGGTCTGGTTGTGTGTCCATTCGCGGGCGTGCTCGCTCCCACAGGTGTCTCGCAAGCTTCAAGGCTTGCTCTGTA                                                                                                                         >  1:1967302/1‑150                                        GCTAGCGAGTGATGAGACTCGCCACGGCTCTCAGACGGCACAATAGGTCGGTAGTTCAGCCTTCGCCAGGCCGGTGGTCTGGTTGTGTGTCCATTCGCGGGCGCGCTCGCTCCCACAGGTGTCTCGCAAGCTTCAAGGCTTGCGCTGTAC                                                                                                                        <  2:423494/150‑1                                        GCTAGCGAGTGATGAGACTCGCCACGGCTCTCAGACGGCACAATAGGTCGGTAGTTCAGCCTTCGCCAGGCCGGTGGTCTGGTTGTGTGTCCATTCGCGGGCGCGCTCGCTCCCACAGGTGTCTCGCAAGCTTCAAGGCTTGCGCTGTAC                                                                                                                        <  2:248075/150‑1                                            GCGAGTGATGAGACTCGCCACGGCTCTCAGACGGCACAATAGGTCGGTAGTTCAGCCTTCGCCAGGCCGGTGGTCTGGTTGTGTGTCCATTCGCGGGCGCGCTCGCTCCCACAGGTGTCTCGCAAGCTTCAAGGCTTGCGCTGTACCTGT                                                                                                                    <  2:1967302/150‑1                                               AGTGATGAGACTCGCCACGGCTCTCAGACGGCACAATAGGTCGGTAGTTCAGCCTTCGCCAGGCCGGTGGTCTGGTTGTGTGTCCATTCGCGGGCACGCCCGCTCCCACAGGTGTCTCGCAAGCTTCAAGGCTTGCGCTGTACCTGTGGG                                                                                                                 <  2:2209016/150‑1                                                  GATGAGACTCGCCACGGCTCTCAGACGGCACAATAGGTCGGTAGTTCAGCCTTCGCCAGGCCGGTGGTCTGGTTGTGTGTCCATTCGCGGGCGCGCTCGCTCCCACAGGTGTCTCGCAAGCTTCAAGGCTTGCGCTGTACCTGTGGGAGC                                                                                                              <  2:710191/150‑1                                                     GAGACTCGCCACGGCTCTCAGACGGCACAATAGGTCGGTAGTTCAGCCTTCGCCAGGCCGGTGGTCTGGTTGTGTGTCCATTCGCGGGCGCGCCCGCTCCCACAGGTGTCTCGCAAGCTTCAAGGCTTGCGCTGTACCTGTGGGAGCGAG                                                                                                           <  1:1305471/150‑1                                                         CTCGCCACGGCTCTCAGACGGCACAATAGGTCGGTAGTTCAGCCTTCGCCAGGCCGGTGGTCTGGTTGTGTGTCCATTCGCGGGCGCGCTCGCTCCCACA                                                                                                                                                         <  2:1457458/100‑1                                                         CTCGCCACGGCTCTCAGACGGCACAATAGGTCGGTAGTTCAGCCTTCGCCAGGCCGGTGGTCTGGTTGTGTGTCCATTCGCGGGCGCGCTCGCTCCCACA                                                                                                                                                         >  1:1457458/1‑100                                                          TCGCCACGGCTCTCAGACGGCACAATAGGTCGGTAGTTCAGCCTTCGCCAGGCCGGTGGTCTGGTTGTGTGTCCATTCGCGGGCGCGCTCGCTCCCACAG                                                                                                                                                        <  1:1684152/100‑1                                                          TCGCCACGGCTCTCAGACGGCACAATAGGTCGGTAGTTCAGCCTTCGCCAGGCCGGTGGTCTGGTTGTGTGTCCATTCGCGGGCGCGCTCGCTCCCACAG                                                                                                                                                        >  2:1684152/1‑100                                                                     CTCAGACGGCACAATAGGTCGGTAGTTCAGCCTTCGCCAGGCCGGTGGTCTGGTTGTGTGTCCGTTCGCGGGCACGCCCGCTCCCACAGGTGTCTCGCAAGCTTCAAGGCTTGCGCTGTACCTGTGGGAGCGAGCGCGCCCGCGAATGGA                                                                                           <  2:1727449/150‑1                                                                       CAGACGGCACAATAGGTCGGTAGTTCAGCCTTCGCCAGGCCGGTGGTCTGGTTGTGTGTCCATTCGCGGGCACGCCCGCTCCCACAGGTGTCTCCCAAGCTTCAAGGCTTGCGCTGTACCTGTGGGAGCGAGCGCGCCCGCGAATGGACA                                                                                         <  1:377068/150‑1                                                                         GACGGCACAATAGGTCGGTAGTTCAGCCTTCGCCAGGCCGGTGGTCTGGTTGTGTGTCCATTCGCGGGCGCGCTCGCTCCCACAGGTACAGCGCAAGCTTCAAGGCTTGCGCTGTACCTGT                                                                                                                    >  2:2216152/1‑121                                                                         GACGGCACAATAGGTCGGTAGTTCAGCCTTCGCCAGGCCGGTGGTCTGGTTGTGTGTCCATTCGCGGGCGCGCTCGCTCCCACAGGTACAGCGCAAGCTTCAAGGCTTGCGCTGTACCTGT                                                                                                                    <  1:2216152/121‑1                                                                             GCACAATAGGTCGGTAGTTCAGCTTTCGCCAGGCCGGTGGTCTGGTTGTGTGTCCGTTCGCGGGCACGCCCGCTCCCACAGGTGTCTCGCAAGCTTCAAGGCTTGCGCTGTGCCTGTGGGAGCGAGCGCGCCCGCGAATGGACACACAAC                                                                                   <  1:1193872/150‑1                                                                                                 AGCCTTCGCCAGGCCGGTGGTCTGGTTGTGTGTCCATTCGCGGGCGCGCTCGCTCCCACAGGTGTCTCGCAAGCTTCAAGGCTTGCGCTGTACCTGTGG                                                                                                                  >  1:235404/1‑99                                                                                                 AGCCTTCGCCAGGCCGGTGGTCTGGTTGTGTGTCCATTCGCGGGCGCGCTCGCTCCCACAGGTGTCTCGCAAGCTTCAAGGCTTGCGCTGTACCTGTGG                                                                                                                  <  2:235404/99‑1                                                                                                       aaCCAGGCCGGTGGTCTGGTTGTGTGTCCATTCGCGGGCGCGCCCGCTCCCACAGGTGTCTCGCAAGCTTCAAGGCTTGCGCTGTACCTGTGG                                                                                                                  >  2:579157/3‑93                                                                                                       aaCCAGGCCGGTGGTCTGGTTGTGTGTCCATTCGCGGGCGCGCCCGCTCCCACAGGTGTCTCGCAAGCTTCAAGGCTTGCGCTGTACCTGTGG                                                                                                                  <  1:579157/91‑1                                                                                                               CGGTGGTCTGGTTGTGTGTCCGTTCGCGGGCACGCCCGCTCCCACAGGTGTCTCGCAAGCTTCAAGGCTTGCGCTGTACCTGTGG                                                                                                                  >  2:1594878/1‑85                                                                                                               CGGTGGTCTGGTTGTGTGTCCGTTCGCGGGCACGCCCGCTCCCACAGGTGTCTCGCAAGCTTCAAGGCTTGCGCTGTACCTGTGG                                                                                                                  <  1:1594878/85‑1                                                                                                                                                   CGCTCCCACAGGTGTCTCGCAAGCTTCAAGGCTTGCGCTGTACCTGTGGGAGCGAGCGCGCCCGCGAATGGACAC                                                                                        >  1:934440/1‑75                                                                                                                                                   CGCTCCCACAGGTGTCTCGCAAGCTTCAAGGCTTGCGCTGTACCTGTGGGAGCGAGCGCGCCCGCGAATGGACAC                                                                                        <  2:934440/75‑1                                                                                                                                                       CCCACAGGTGTCTCGCAAGCTTCAAGGCTTGCGCTGTACCTGTGGGAGCGAGCGCGCCCGCGAATGGACACACAACCAGACCACCGGCCTGGCGAAGGCTGAACTACCGACCTATTGTGCCGTCTGAGAGCCGTGGCGAGTCTCA              <  2:1863952/145‑1                                                                                                                                                       CCCACAGGTGTCTCGCAAGCTTCAAGGCTTGCGCTGTACCTGTGGGAGCGAGCGCGCCCGCGAATGGACACACAACCAGACCACCGGCCTGGCGAAGGCTGAACTACCGACCTATTGTGCCGTCTGAGAGCCGTGGCGAGTCTCA              >  1:1863952/1‑145                                                                                                                                                        CCACAGGTGTCTCGCAAGCTTCAAGGCTTGCGCTGTACCTGTGGGAGCGAGCGCGCCCGCGAATGGACACACAACCAGACCACCGGCCTGGCGAAGGCTGAACTACCGACCTATTGTGCCGTCTGAGAGCCGTGGCGAGTCTCATCACTC        <  2:985180/150‑1                                                                                                                                                        CCACAGGTGTCTCGCAAGCTTCAAGGCTTGCGCTGTACCTGTGGGAGCGAGCGCGCCCGCGAATGGACACACAACCAGACCACCGGCCTGGCGAAGGCTGAACTACCGACCTATTGTGCCGTCTGAGAGCCGTGGCGAGTCTCATCACTC        >  2:1461688/1‑150                                                                                                                                                         CACAGGTGTCTCGCAAGCTTCAAGGCTTGCGCTGTACCTGTGGGAGCGAGCGCGCCCGCGAATGGACACACAACCAGACCACCGGCCT                                                                     <  2:2284732/88‑1                                                                                                                                                         CACAGGTGTCTCGCAAGCTTCAAGGCTTGCGCTGTACCTGTGGGAGCGAGCGCGCCCGCGAATGGACACACAACCAGACCACCGGCCT                                                                     >  1:2284732/1‑88                                                                                                                                                            AGGTGTCTCGCAAGCTTCAAGGCTTGCGCTGTACCTGTGGGAGCGAGCGCGCCCGCGAATGGACACACAACCAGACCACCGGCCTGGCGAAGGCTGAACTACCGACCTATTGTGCCGTCTGAGAGCCGTGGCGAGTCTCATCACTCGCTA    <  2:189654/150‑1                                                                                                                                                            AGGTGTCTCGCAAGCTTCAAGGCTTGCGCTGTACCTGTGGGAGCGAGCGCGCCCGCGAATGGACACACAACCAGACCACCGGCCTGGCGAAGGCTGAACTACCGACCTATTGTGCCGTCTGAGAGCCGTGGCGAGTCTCATCACTCGCTA    <  2:89884/150‑1                                                                                                                                                            AGGTGTCTCGCAAGCTTCAAGGCTTGCGCTGTACCTGTGGGAGCGAGCGCGCCCGCGAATGGACACACAACCAGACCACCGGCCTGGCGAAGGCTGAACTACCGACCTATTGTGCCGTCTGAGAGCCGTGGCGAGTCTCATCACTCGCTA    <  1:1868343/150‑1                                                                                                                                                            AGGTGTCTCGCAAGCTTCAAGGCTTGCGCTGTACCTGTGGGAGCGAGCGCGCCCGCGAATGGACACACAACCAGACCACCGGCCTGGCGAAGGCTGAACTACCGACCTATTGTGCCGTCTGAGAGCC                           >  2:1220929/1‑127                                                                                                                                                            AGGTGTCTCGCAAGCTTCAAGGCTTGCGCTGTACCTGTGGGAGCGAGCGCGCCCGCGAATGGACACACAACCAGACCACCGGCCTGGCGAAGGCTGAACTACCGACCTATTGTGCCGTCTGAGAGCC                           <  1:1220929/127‑1                                                                                                                                                              GTGTCTCGCAAGCTTCAAGGCTTGCGCTGTACCTGTGGGAGCGAGCGCGCCCGCGAATGGACACACAACCAGACCACCGGCCTGGCGAAGGCTGAACTACCGACCTATTGTGCCGTCTGAGAGCCGTGGCGAGTCTCATCACTCGCTAGC  >  2:47934/1‑150                                                                                                                                                              GTGTCTCGCAAGCTTCAAGGCTTGCGCTGTACCTGTGGGAGCGAGCGCGCCCGCGAATGGACACACAACCAGACCACCGGCCTGGCGAAGGCTGAACTACCGACCTATTGTGCCGTCTGAGAGCCGTGGCGAGTCTCATCACTCGCTAGC  >  1:313020/1‑150                                                                                                                                                                                                                                                                                                                     GGGATGAAAAACCCACGCAGTTTACAGGGAGAGTGACGGGCTAGCGAGTGATGAGACTCGCCACGGCTCTCAGACGGCACAATAGGTCGGTAGTTCAGCCTTCGCCAGGCCGGTGGTCTGGTTGTGTGTCCATTCGCGGGCGCGCTCGCTCCCACAGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5743246‑5743404 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgctcccacaggtGTCTCGCAAGCTTCAAGGCTTGCGCTGTACCTGTGGGAGCGAGCGCGCCCGCGAATGGACACACAACCAGACCACCGGCCTGGCGAAGGCTGAACTACCGACCTATTGTGCCGTCTGAGAGCCGTGGCGAGTCTCATCACTCGCTAGC  <  NC_002947/5743432‑5743285

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.