| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5999355 | 84 (0.950) | 15 (0.180) | 8/230 | NT | 16.4% | intergenic (‑154/‑167) | ycaC‑IV/PP_5256 | putative hydrolase/cyclic nucleotide‑binding protein |
| ? | NC_002947 | = 5999440 | 74 (0.890) | intergenic (‑239/‑82) | ycaC‑IV/PP_5256 | putative hydrolase/cyclic nucleotide‑binding protein | |||||
GGGGGTAGCTCCTAAGGGTTTTGATGTTCAGTAAGTTGGGTGTTTCGCGTTGATGGGAGAAGATTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5999202‑5999355‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgctggccCCTTCGC‑GACTTGCCCGTTCCCACAGGTAAAGCGCTGGTTTTGAATCTTGTGCGATCCCTGTGGGAACGGGCGTGCCCGCGAAGAGGCCAGCAAAACCAACGCCAATCTATCGTTCCTAAAACAGAACGCTAAAGGCAAAAACCACTAT < NC_002947/5999440‑5999292 GGGGGTAGCTCCTAAGGGTTTTGATGTTCAGTAAGTTGGGTGTTTCGCGTTGATGGGAGAAGATTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCT < 1:1207487/150‑1 CTAAGGGTTTTGATGTTCAGTAAGTTGGGTGTTTCGCGTTGATGGGAGAAGATTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCC > 2:827251/1‑143 CTAAGGGTTTTGATGTTCAGTAAGTTGGGTGTTTCGCGTTGATGGGAGAAGATTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCC < 1:827251/143‑1 CTAAGGGTTTTGATGTTCAGTAAGTTGGGTGTTTCGCGTTGATGGGAGAAGATTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTG < 1:1245148/140‑1 CTAAGGGTTTTGATGTTCAGTAAGTTGGGTGTTTCGCGTTGATGGGAGAAGATTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTG > 2:1245148/1‑140 ATGTTCAGTAAGTTGGGTGTTTCGCGTTGATGGGAGAAGATTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCCCTTCGC‑GACTTGCCCGTT > 1:1710807/1‑150 AGTAAGTTGGGTGTTTCGCGTTGATGGGAGAAGATTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCCCTTCGC‑GACTTGCCCGTTCCCACA > 2:299645/1‑150 TGTTTCGCGTTGATGGGAGAAGATTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTGTGCTGGCCCCTTCGC‑GACTTGCCCGTTCCCACAGGTAAAGCGCT > 1:583051/1‑150 GTTTCGCGTTGATGGGAGAAGATTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTG < 1:2172586/110‑1 GTTTCGCGTTGATGGGAGAAGATTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTG > 2:2172586/1‑110 AACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTG > 1:1367003/1‑84 AACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTG < 2:1367003/84‑1 CACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCCCTTCGC‑GACTTGCCCGTTCCCACAGGTAAAGCGCTGGTTTTGAATCTTGTGCGATCCCTGTGGGAACG < 2:1710807/150‑1 GTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCCCTTCGC‑GACTTGCCCGTTCCCACAGGTAAAGCGCTGGTTTTGAATCTTGTGCGATCCCTGTGGGAACGGGCGTGCCCGCGA > 1:618483/1‑150 GTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCT < 2:1684380/64‑1 GTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCT > 1:1684380/1‑64 ATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCCCTTCGC‑GACTTGCCCGTTCCCACAGGTAAAGCGCTGGTTTTGAATCTTGTGCGATCCCTGTGGGAACGGGCGTGCCCGCGAAGAG < 2:618483/150‑1 ATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTGTGCTGGCCCCTTCGC‑GACTTGCCCGTTCCCACAGGTAAAGCGCTGGTTTTGAATCTTGTGCGATCCCTGTGGGAACGGGCGTGCCCGCGAAGAG < 2:583051/150‑1 GTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCCCTTCGC‑GACTTGCCCGTTCCCACAGGTAAAGCGCTGGTTTTGAATCTTGTGCGATCCCTGTGGGAACGGGCGTGCCCGCGAAGAGGCC < 1:299645/150‑1 TGGTTTTTGCTTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCCCTTCGC‑GACTTGCCCGTTCCCACAGGTAAATCGCTGGTTTTGCTTCTTGTGCGATCCCTGTGGGAACGGGCGTGCCCGCGAAGAGGCCA < 2:527123/150‑1 GTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGTAAAGCGCTGGTTTTGAATCTTGTGCGATCCCTGTGGGAACGG > 2:830112/1‑129 GTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGTAAAGCGCTGGTTTTGAATCTTGTGCGATCCCTGTGGGAACGG < 1:830112/129‑1 GAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGTAAAGCGCTGGTTTTGAATCTTGTGCGATCCCTGTGGGAA < 2:348349/99‑1 GAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGTAAAGCGCTGGTTTTGAATCTTGTGCGATCCCTGTGGGAA > 1:348349/1‑99 GAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGTAAAGCGCTGGTTTTGAATCTTGTGCGATCCCTGTG < 2:1097688/95‑1 GAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGTAAAGCGCTGGTTTTGAATCTTGTGCGATCCCTGTG > 1:1097688/1‑95 GGCCCCTTCGC‑GACTTGCCCGTTCCCACAGGTAAAGCGCTGGTTTTGAATCTTGTGCGATCCCTGTGGGAACGGGCGTGCCCGCGAAGAGGCCAGCAAAACCAACGCCAATCTATCGTTCCTAAAACAGAACGCTAAAGGCAAAAACCAC < 1:1723190/150‑1 GCCCCTTCGC‑GACTTGCCCGTTCCCACAGGTAAAGCGCTGGTTTTGAATCTTGTGCGATCCCTGTGGGAACGGGCGTGCCCGCGAAGAGGCCAGCAAAACCAACGCCAATCTATCGTTCCTAAAACAGAACGCTAAAGGCAAAAACCACT > 2:1437630/1‑150 GCCCCTTCGC‑GACTTGCCCGTTCCCACAGGTAAAGCGCTGGTTTTGAATCTTGTGCGATCCCTGTGGGAACGGGCGTGCCCGCGAAGAGGCCAGCAAAACCAACGCCAATCTATCGTTCCTAAAACAGAACGCTAAAGGCAAAAACCACT < 1:638441/150‑1 GCCCCTTCGC‑GACTTGCCCGTTCCCACAGGTAAAGCGCTGGTTTTGAATCTTGTGCGATCCCTGTGGGAACGGGCGTGCCCGCGAAGAGGCCAGCAAAACCAACGCCAATCTATCGTTCCTAAAACAGAACGCTAAAGGCAAAAACCACT < 1:544671/150‑1 CCCCTTCGC‑GACTTGCCCGTTCCCAAAGGTAAAGCGCTGGTTTTGAATCTTGTGCGATCCCTGTGGGAACGGGCGTGCCCGCGAAGAGGCCAGCAAAACCAACGCCAATCTATCGTTCCTAAAACAGAACGCTAAAGGCAAAAACCACTA < 2:1615033/150‑1 CCCTTCGC‑GACTTGCCCGTTCCCACAGGTAAAACGCTGGTTTTGAATCTTATGCGATCCATGTGGGAACGGGCGTGCCCGCGAAGAGGACAGCAAACCCAACGCTAATCTATCGTTCCTAAAACAGAAAGATAAAGGCAAAAACCACTAT > 2:133963/1‑150 GGGGGTAGCTCCTAAGGGTTTTGATGTTCAGTAAGTTGGGTGTTTCGCGTTGATGGGAGAAGATTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5999202‑5999355‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgctggccCCTTCGC‑GACTTGCCCGTTCCCACAGGTAAAGCGCTGGTTTTGAATCTTGTGCGATCCCTGTGGGAACGGGCGTGCCCGCGAAGAGGCCAGCAAAACCAACGCCAATCTATCGTTCCTAAAACAGAACGCTAAAGGCAAAAACCACTAT < NC_002947/5999440‑5999292 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |