New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 599935584 (0.950)15 (0.180) 8/230 NT 16.4% intergenic (‑154/‑167) ycaC‑IV/PP_5256 putative hydrolase/cyclic nucleotide‑binding protein
?NC_002947 = 5999440 74 (0.890)intergenic (‑239/‑82) ycaC‑IV/PP_5256 putative hydrolase/cyclic nucleotide‑binding protein

Only 100 of 127 total aligned reads displayed.

AGCTCCTAAGGGTTTTGATGTTCAGTAAGTTGGGTGTTTCGCGTTGATGGGAGAAGATTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTCGCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATTACTACCCACAGCCCTCCCC  >  NC_002947/5999208‑5999504
                                                                                                                                                   |                                                                                                                                                     
aGCTCCTAAGGGTTTTGATGTTCAGTAAGTTGGGTGTTTCGCGTTGATGGGAGAAGATTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCctc                                                                                                                                                     >  1:616670/1‑150 (MQ=255)
  cTCCTAAGGGTTTTGATGTTCAGTAAGTTGGGTGTTTCGCGTTGATGGGAGAAGATTAAAAACACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCtt                                                                                                                                                   >  2:207923/1‑150 (MQ=255)
   tCCTAAGGGTTTTGATGTTCAGTAAGTTGGGTGTTTCGCGTTGATGGGAGAAGATTAAAACCACTACCTTTGGAGCGGTAGAGAGTGGTTTTTGCCTTTAGCGTTCTGTTTTTGGAACGATAGATTGGCGGGGGTGTTCCTGGCCTCTTc                                                                                                                                                  >  1:369368/1‑150 (MQ=39)
   tCCTAAGGGTTTTGATGTTCAGTAAGTTGGGTGTTTCGCGTTGATGGGAGAAGATTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTc                                                                                                                                                  >  2:496812/1‑150 (MQ=255)
     cTAAGGGTTTTGATGTTCAGTAAGTTGGGTGTTTCGCGTTGATGGGAGAAGATTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCC                                                                                                                                                       >  2:827251‑M1/1‑143 (MQ=255)
     cTAAGGGTTTTGATGTTCAGTAAGTTGGGTGTTTCGCGTTGATGGGAGAAGATTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCC                                                                                                                                                       <  1:827251‑M1/143‑1 (MQ=255)
      tAAGGGTTTTGATGTTCAGTAAGTTGGGTGTTTCGCGTTGATGGGAGAAGATTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTcgcg                                                                                                                                               >  1:977981/1‑150 (MQ=255)
       aaGGGTTTTGATGTTCAGTAAGTTGGGTGTTTCGCGTTGATGGGAGAAGATTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCgg                                                                                                                                              <  2:2064920/150‑1 (MQ=255)
       aaGGGTTTTGATGTTCAGTAAGTTGGGTGTTTCGCGTTGATGGGAGAAGATTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCgg                                                                                                                                              >  2:2047799/1‑150 (MQ=255)
          ggTTTTGATGTTCAGTAAGTTGGGTGTTTCGCGTTGATGGGAGAAGATTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCa                                                                                                                                           >  1:1341799/1‑150 (MQ=255)
           gTTTTGATGTTCAGTAAGTTGGGTGTTTCGCGTTGATGGGAGAAGATTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCAc                                                                                                                                          <  1:496812/150‑1 (MQ=255)
                       aGTAAGTTGGGTGTTTCGCGTTGATGGGAGAAGATTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCccttcgcgacttgcccgttcccaca                                                                                                                              >  2:299645‑M1/1‑125 (MQ=255)
                       aGTAAGTTGGGTGTTTCGCGTTGATGGGAGAAGATTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCcac                                                                                                                              >  2:2405495/1‑150 (MQ=255)
                              tGGGTGTTTCGCGTTGATGGGAGAAGATTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATc                                                                                                                       <  1:1246942/150‑1 (MQ=255)
                               gggTGTTTCGCGTTGATGGGAGAAGATTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCg                                                                                                                      <  1:108156/150‑1 (MQ=255)
                                ggTGTTTCGCGTTGATGGGAGAAGATTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGc                                                                                                                     <  1:207923/150‑1 (MQ=255)
                                  tgtTTCGCGTTGATGGGAGAAGATTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGcac                                                                                                                   >  2:194115/1‑150 (MQ=255)
                                  tgtTTCGCGTTGATGGGAGAAGATTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTGTGCTGGCCccttcgcgacttgcccgttcccacaggtaaagcgct                                                                                                                   >  1:583051‑M1/1‑114 (MQ=255)
                                    tttCGCGTTGATGGGAGAAGATTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACaa                                                                                                                 >  2:1350815/1‑150 (MQ=255)
                                    tttCGCGTTGATGGGAGAAGATTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACaa                                                                                                                 <  1:360507/150‑1 (MQ=255)
                                      tCGCGTTGATGGGAGAAGATTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGc                                                                                                                                            >  1:2180372/1‑121 (MQ=255)
                                      tCGCGTTGATGGGAGAAGATTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGa                                                                                                               <  1:315603/150‑1 (MQ=255)
                                       cgcgTTGATGGGAGAAGATTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGAt                                                                                                              <  2:1660852/150‑1 (MQ=255)
                                        gcgTTGATGGGAGAAGATTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGAtt                                                                                                             >  2:374035/1‑150 (MQ=255)
                                         cgTTGATGGGAGAAGATTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTc                                                                                                            <  1:1774062/150‑1 (MQ=255)
                                         cgTTGATGGGAGAAGATTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTc                                                                                                            <  1:1350815/150‑1 (MQ=255)
                                           ttGATGGGAGAAGATTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCaa                                                                                                          <  2:540425/150‑1 (MQ=255)
                                                gggAGAAGATTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCa                                                                                                     <  2:616670/150‑1 (MQ=255)
                                                 ggAGAAGATTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCTGTTCCCACAGGGATCGCACAAGATTCAAAACCAg                                                                                                    >  1:1291147/1‑150 (MQ=255)
                                                  gagaAGATTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAgc                                                                                                   >  2:1487647/1‑150 (MQ=255)
                                                     aagaTTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCgg                                                                                                                                              <  1:1665633/104‑1 (MQ=255)
                                                     aagaTTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCgg                                                                                                                                              >  2:1665633/1‑104 (MQ=255)
                                                       gaTTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCttt                                                                                              >  1:1437630/1‑150 (MQ=255)
                                                        aTTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCgg                                                                                                                                              <  1:654655/101‑1 (MQ=255)
                                                        aTTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCgg                                                                                                                                              >  2:654655/1‑101 (MQ=255)
                                                           aaaaCCACCACCTTTGGAGCGGTAGATAGTGGTTTTAACCCTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCt                                                                                          <  1:737846/150‑1 (MQ=255)
                                                                caccaccTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTggg                                                                                     >  1:275193/1‑150 (MQ=255)
                                                                  ccaccTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGaa                                                                                   >  2:513116/1‑150 (MQ=255)
                                                                    accTTTGGAGTGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACg                                                                                 <  2:369368/150‑1 (MQ=255)
                                                                      cTTTGGAGCGGTAGATGGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGCTAGCTTGGCGGTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATGCAAAACCAGCGCTTTACCTGTGTGAACggg                                                                               >  1:574548/1‑150 (MQ=255)
                                                                      cTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCtgtg                                                                                       >  2:2239178/1‑142 (MQ=255)
                                                                      cTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCtgtg                                                                                       <  1:2239178/142‑1 (MQ=255)
                                                                      cTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACggg                                                                               >  2:210632/1‑150 (MQ=255)
                                                                       tttGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGc                                                                              <  1:210632/150‑1 (MQ=255)
                                                                         tGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAACCCAGCGCTTTACCTGTGGGAACGGGCaa                                                                            <  1:1304073/150‑1 (MQ=255)
                                                                                gTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGAt                                                                                                              <  2:2310239/109‑1 (MQ=255)
                                                                                gTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGAt                                                                                                              >  1:2310239/1‑109 (MQ=255)
                                                                                  aGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTCGCGAAg                                                                   <  1:2047799/150‑1 (MQ=255)
                                                                                   gaaaGTTGTTTTTGACTTTAGCGTTCTATTTTAGGGCCGATAGATTGGCGTTGGTTTTGCTGGCCTCGACGCCCGCACGCCCGTTCCCACAGGGATCGCAAAGGATTCAACAGCAGCGCTTTGCCTGTGGGAACCGGCAAGTCGCGAAgg                                                                  <  2:574548/147‑1 (MQ=255)
                                                                                   gATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTCGCGAAgg                                                                  <  2:121065/150‑1 (MQ=255)
                                                                                    aTAGTGGTTTTTGCCTTTATCTTTCTGTTTTAGGAACGATAGATTAGCGTTGGGTTTGCTGTCCTCTTCGCGGGCACGCCCGTTCCCACATGGATCGCATAAGATTCAAAACCAGCGTTTTACCTGTGGGAACGGGCAAGTCGCGAAGGg                                                                 >  2:133963‑M2/1‑149 (MQ=255)
                                                                                    aTAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCccttcgcgacttgcccgttcccacaggtaaagcgctggttttgaatcttgtgcgatccctgtgggaacgggcgtgcccgcgaagag                                                                 <  2:618483‑M1/150‑87 (MQ=255)
                                                                                    aTAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTGTGCTGGCCccttcgcgacttgcccgttcccacaggtaaagcgctggttttgaatcttgtgcgatccctgtgggaacgggcgtgcccgcgaagag                                                                 <  2:583051‑M1/150‑87 (MQ=255)
                                                                                     tAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTTTGGGAACGGGCAAGTCGCGAAGGgg                                                                <  2:1615033‑M2/150‑3 (MQ=255)
                                                                                      aGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTCGCGAAGGggc                                                               <  1:638441‑M2/150‑4 (MQ=255)
                                                                                      aGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTCGCGAAGGggc                                                               <  1:544671‑M2/150‑4 (MQ=255)
                                                                                      aGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTCGCGAAGGggc                                                               >  2:1437630‑M2/1‑147 (MQ=255)
                                                                                       gTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCccttcgcgacttgcccgttcccacaggtaaagcgctggttttgaatcttgtgcgatccctgtgggaacgggcgtgcccgcgaagaggcc                                                              <  1:299645‑M1/150‑90 (MQ=255)
                                                                                       gTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTCGCGAAGGggcc                                                              <  1:1723190‑M2/150‑5 (MQ=255)
                                                                                       gTGGTTTTTATCTTTAGCGCTCTGTTTTAGGAACGATAGTTTGGCGTTTTACCGACGGTCCTCTTCGCGGGCACGCCCGGTTCCACAGGGATTCCACAAGATTCAAAACCAGCCTTTTTCCTTTGGTAACGGTCAAGTCGCTAAGGGTcc                                                              >  2:340128/1‑150 (MQ=255)
                                                                                        tGGTTTTTGCTTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCccttcgcgacttgcccgttcccacaggtaaatcgctggttttgcttcttgtgcgatccctgtgggaacgggcgtgcccgcgaagaggcca                                                             <  2:527123‑M1/150‑91 (MQ=255)
                                                                                        tGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCg                                                                                                                      >  2:1116125/1‑93 (MQ=255)
                                                                                        tGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCg                                                                                                                      <  1:1116125/93‑1 (MQ=255)
                                                                                          gTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCtcttcgcgggcacgcccgttcccacaggtaaagcgctggttttgaatcttgtgcgatccctgtgggaacgg                                                                                <  1:830112‑M1/129‑72 (MQ=255)
                                                                                          gTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCtcttcgcgggcacgcccgttcccacaggtaaagcgctggttttgaatcttgtgcgatccctgtgggaacgg                                                                                >  2:830112‑M1/1‑58 (MQ=255)
                                                                                             tttGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTCGCGAAGGGGCCAGcaca                                                        <  2:275193/150‑1 (MQ=255)
                                                                                              ttGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTCGCGAAGGGGCCAGCACAg                                                       <  1:513116/150‑1 (MQ=255)
                                                                                                  cTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTCGCGAAGGGGCCAGCACAGGCtt                                                   <  2:1291147/150‑1 (MQ=255)
                                                                                                  cTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTCGCGAAGGGGCCAGCACAGGCtt                                                   >  2:36504/1‑150 (MQ=255)
                                                                                                   tttAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCCGCGCTTTACCTGTGGGAACGGGCAAGTCGCGAAGGGGCCAGCACAGGCTTg                                                  >  2:206729/1‑150 (MQ=255)
                                                                                                     tAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTCGCGAAGGGGCCAGCACAGGCTTGCa                                                <  1:482240/150‑1 (MQ=255)
                                                                                                          ttCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCAAAGGGATCGCACAAGATTCAAAACCAACGCTTTACCTTTGGGAACTGGCAAGTCGCGAAGGGGCCACCACAGGCTTTCATtgcc                                           >  2:879767/1‑150 (MQ=255)
                                                                                                             tGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAgc                                                                                                   >  2:152716/1‑91 (MQ=255)
                                                                                                             tGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAgc                                                                                                   <  1:152716/91‑1 (MQ=255)
                                                                                                              gTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAg                                                                                                                            <  1:2052535/65‑1 (MQ=255)
                                                                                                               ttttAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTCGCGAAGGGGCCAGCACAGGCTTGCATTgcctgcct                                      >  1:1288892/1‑150 (MQ=255)
                                                                                                                     gAACGATAGATTGGCGTTGGTTTTGCTGGCCtcttcgcgggcacgcccgttcccacaggtaaagcgctggttttgaatcttgtgcgatccctgtgggaa                                                                                   <  2:348349‑M1/99‑69 (MQ=255)
                                                                                                                     gAACGATAGATTGGCGTTGGTTTTGCTGGCCtcttcgcgggcacgcccgttcccacaggtaaagcgctggttttgaatcttgtgcgatccctgtgggaa                                                                                   >  1:348349‑M1/1‑31 (MQ=255)
                                                                                                                     gAACGATAGATTGGCGTTGGTTTTGCTGGCCtcttcgcgggcacgcccgttcccacaggtaaagcgctggttttgaatcttgtgcgatccctgtg                                                                                       >  1:1097688‑M1/1‑31 (MQ=255)
                                                                                                                     gAACGATAGATTGGCGTTGGTTTTGCTGGCCtcttcgcgggcacgcccgttcccacaggtaaagcgctggttttgaatcttgtgcgatccctgtg                                                                                       <  2:1097688‑M1/95‑65 (MQ=255)
                                                                                                                     gAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCtgtg                                                                                       >  2:1940975/1‑95 (MQ=255)
                                                                                                                     gAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCtgtg                                                                                       <  1:1940975/95‑1 (MQ=255)
                                                                                                                         gATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTCGCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTg                            >  2:1938865/1‑150 (MQ=255)
                                                                                                                                 ggCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTCGCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATta                    <  2:544671/150‑1 (MQ=255)
                                                                                                                                    gTTAGTTTTGCTGGCCGCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTCGCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATtacta                 <  2:1341799/150‑1 (MQ=255)
                                                                                                                                        gTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTCGCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATTACTACCca             >  1:2164617/1‑150 (MQ=255)
                                                                                                                                             gCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTCGCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATTACTACCCACAGcc        >  1:2328107/1‑150 (MQ=255)
                                                                                                                                              cTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTCGCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATTACTACCCACAGccc       <  1:1615033/150‑1 (MQ=255)
                                                                                                                                               tGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTCGCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATTACTACCCACAGccct      >  1:2287029/1‑150 (MQ=255)
                                                                                                                                               tGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTCGCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATTACTACCCACAGccct      >  1:365375/1‑150 (MQ=255)
                                                                                                                                                ggCCccttcgcgacttgcccgttcccacaggtaaagcgctggttttgaatcttgtgcgatccctgtgggaacgggcgtgcccgcgaagaggccagcaaaaccaacgccaatctatcgttcctaaaacagaacgctaaaggcaaaaaccac     <  1:1723190‑M1/150‑147 (MQ=255)
                                                                                                                                                ggCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTCGCGAAGGggccagcaaaaccaacgccaatctatcgttcctaaaacagaacgctaaaggcaaaaaccac     <  1:299645‑M2/150‑62 (MQ=255)
                                                                                                                                                 gCCccttcgcgacttgcccgttcccacaggtaaagcgctggttttgaatcttgtgcgatccctgtgggaacgggcgtgcccgcgaagaggccagcaaaaccaacgccaatctatcgttcctaaaacagaacgctaaaggcaaaaaccact    <  1:638441‑M1/150‑148 (MQ=255)
                                                                                                                                                 gCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTCGCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATTACTACCCACAGccctcc    >  2:383251/1‑150 (MQ=255)
                                                                                                                                                  ccccttcgcgacttgcccgttcccaaaggtaaagcgctggttttgaatcttgtgcgatccctgtgggaacgggcgtgcccgcgaagaggccagcaaaaccaacgccaatctatcgttcctaaaacagaacgctaaaggcaaaaaccacta   <  2:1615033‑M1/150‑149 (MQ=255)
                                                                                                                                                  ccTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTCGCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATTACTACCCACAGccctccc   <  1:2405495/150‑1 (MQ=255)
                                                                                                                                                   ctctTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTCGCGAAGGggccagcaaaaccaacgccaatctatcgttcctaaaacagaacgctaaaggcaaaaaccactat  <  2:618483‑M2/150‑65 (MQ=255)
                                                                                                                                                   ctctTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTCGCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATTACTACCCACAGccctcccc  >  1:1393049/1‑150 (MQ=255)
                                                                                                                                                   ctctTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTCGCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATTACTACCCACAGccctcccc  >  1:1147854/1‑150 (MQ=255)
                                                                                                                                                   cccttcgcgacttgcccgttcccacaggtaaaacgctggttttgaatcttatgcgatccatgtgggaacgggcgtgcccgcgaagaggacagcaaacccaacgctaatctatcgttcctaaaacagaaagataaaggcaaaaaccactat  >  2:133963‑M1/1‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                     
AGCTCCTAAGGGTTTTGATGTTCAGTAAGTTGGGTGTTTCGCGTTGATGGGAGAAGATTAAAACCACCACCTTTGGAGCGGTAGATAGTGGTTTTTGCCTTTAGCGTTCTGTTTTAGGAACGATAGATTGGCGTTGGTTTTGCTGGCCTCTTCGCGGGCACGCCCGTTCCCACAGGGATCGCACAAGATTCAAAACCAGCGCTTTACCTGTGGGAACGGGCAAGTCGCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATTACTACCCACAGCCCTCCCC  >  NC_002947/5999208‑5999504

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.