New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 6013891	42 (0.470)	9 (0.130)	8/192	NT	18.8%	intergenic (+40/+70)	xpt/PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
	?	NC_002947	= 6013919	45 (0.650)					intergenic (+68/+42)	xpt/PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein

GCGGGCCTGGGTATCGTGATCGAGAAGTCGTTCCAGGGCGGCCGTGCCGAACTGGACAGCCAGGGTTACCGCGTTGAATCGCTGGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/6013720‑6013891 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcgggcacgcccgctcccacaggtACGGCACAGCGT‑TCGAGAC‑CTGTGCTGCACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGTGTCGCGTTTATTCGATGAAGCTGACCACACCACCTTCCAGCGACTTCACCCGGGCCAGCGATTCAACGCGGTAACCCTGGCTGTCCAG  <  NC_002947/6013919‑6013771                                                                                                                                                                                                                                                                                                                                     GCGGGCCTGGGTATCGTGATCGAGAAGTCGTTCCAGGGCGGCCGTGCCGAACTGGACAGCCAGGGTTACCGCGTTGAATCGCTGGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGC                                                                                                                                                                               <  1:1198889/150‑1  CGGGCCTGGGTATCGTGATCGAGAAGTCGTTCCAGGGCGGCCGTGCCGAACTGGACAGCCAGGGTTACCGCGTTGAATCGCTGGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCG                                                                                                                                                                              <  2:2242335/150‑1        TGGGTATCGTGATCGAGAAGTCGTTCCAGGGCGGCCGTGCCGAACTGGACAGCCAGGGTTACCGCGTTGAATCGCTGGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACG                                                                                                                                                                        >  1:1794013/1‑150                GTGATCGAGAAGTCGTTCCAGGGCGGCCGTGCCGAACTGGACAGCCAGGGTTACCGCGTTGAATCGCTGGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCGTGCCCGCgaa                                                                                                                                                                <  2:444399/150‑4                     CGAGAAGTCGTTCCAGGGCGGCCGTGCCGAACTGGACAGCCAGGGTTACCGCGTTGAATCGCTGGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAG                                                                                                                                                           <  1:1138498/150‑1                      GAGAAGTCGTTCCAGGGCGGCCGTGCCGAACTGGACAGCCAGGGTTACCGCGTTGAATCGCTGGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGG                                                                                                                                                          >  1:1218576/1‑150                       AGAAGTCGTTCCAGGGCGGCCGTGCCGAACTGGACAGCCAGGGTTACCGCGTTGAATCGCTGGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGT                                                                                                                                                         <  2:1028819/150‑1                              ccgctgGGGCGGCCGTGCCGAACTGGACAGCCAGGGTTACCGCGTTGAATCGCTGGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTACGGCAC                                                                                                                                                  >  2:2402137/7‑150                                                CGAACTGGACAGCCAGGGTTACCGCGTTGAATCGCTGGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCAC                                                                                                                                                                         >  1:1358258/1‑109                                                CGAACTGGACAGCCAGGGTTACCGCGTTGAATCGCTGGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCAC                                                                                                                                                                         <  2:1358258/109‑1                                                                 GTTACCGCGTTGAATCGCTGGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGC                                                                                                                                                                               >  1:2007843/1‑86                                                                 GTTACCGCGTTGAATCGCTGGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGC                                                                                                                                                                               <  2:2007843/86‑1                                                                      CGCGTTGAATCGCTGGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTACGGCACAGCGT‑TCGAGAC‑CTGTGCTGCACCTGT                                                                                                                     <  2:452215/137‑1                                                                      CGCGTTGAATCGCTGGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTACGGCACAGCGT‑TCGAGAC‑CTGTGCTGCACCTGT                                                                                                                     >  1:452215/1‑137                                                                      CGCGTTGAATCGCTGGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAG                                                                                                                                                           <  1:2022699/101‑1                                                                      CGCGTTGAATCGCTGGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAG                                                                                                                                                           >  2:2022699/1‑101                                                                                                   GCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTACGGCACAGCGT‑TCGAGAC‑CTGTGCTGCACCTGTGGGAGCGG                                                                                                             >  2:505579/1‑116                                                                                                   GCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTACGGCACAGCGT‑TCGAGAC‑CTGTGCTGCACCTGTGGGAGCGG                                                                                                             <  1:505579/116‑1                                                                                                      GGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTACGGCACAGCGT‑TCGAGAC‑CTGTGCTGCACCT                                                                                                                       >  1:2312524/1‑103                                                                                                      GGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTACGGCACAGCGT‑TCGAGAC‑CTGTGCTGCACCT                                                                                                                       <  2:2312524/103‑1                                                                                                                        CTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTACGGCACAGCGT‑TCGAGAC‑CTGTGCTGCAC                                                                                                                         <  2:894781/83‑1                                                                                                                        CTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTACGGCACAGCGT‑TCGAGAC‑CTGTGCTGCAC                                                                                                                         >  1:894781/1‑83                                                                                                                                                          CACGCCCGCTCCCACAGGTACGGCACAGCGT‑TCGAGAC‑CTGTGCTGCACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGTGTCGCGTTTATTCGATGAAGCTGACCACACAACCTTCCAGCGACTTCACCCGGGCCAGCGATTCAACGCG                    >  1:2308955/1‑150                                                                                                                                                          CACCCCCGCTCCCACAGGTACTGCACAGCGT‑TCGAGAT‑CTGTGCTGCACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGTGTCGCGTTTATTCGATGAAGCTGACCACACCACCTTCCAGCGACTTCACCCGGGCCAGCGATTCAACGCG                    <  1:1029213/150‑1                                                                                                                                                             GCCCGCTCCCACAGGTACGGCACAGCGT‑TCGAGAC‑CTGTGCTGCACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGTGTCGCGTTTATTCGATGAAGCTGACCACACCACCTTCCAGCGACTTCACCCGGGCCAGCGATTCAACGCGGTA                 >  1:1988516/1‑150                                                                                                                                                              CCCGCTCCCACAGGTACGGCACAGCGT‑TCGCGAC‑CTGTGCTGCACCTGTGGGAGCGGGCGTGCCCGCGAAACAGGTGTCGCGTTTATTCGATGAAGCTGACCACACCACCTTCCAGCGACTTCACCCGGGCCAGCGATTCAACGCGGTAc                >  1:820765/1‑149                                                                                                                                                              CCCGCTCCCACAGGTACGGCACAGCGT‑TCGAGAC‑CTGTGCTGCACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGTCTCGCGTTTATTCGATGAAGCTGACCACACCACCTTCCAGCGACTTCACCCGGGCCAGCGATTCAACGCGGTAA                >  2:458957/1‑150                                                                                                                                                               CCGCTCCCACAGGTGCAGCACAG‑GTCTCGA‑ACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGTGTCGCGTTTATTCGATGAAGCTGACCACACCACCTTCCAGCGACTTCACCCGGGCCAGCGATTCAACGCGGTAAC               >  1:2402137/1‑150                                                                                                                                                                 GCTCCCACAGGTACGGCACAGCGT‑TCGAGAC‑CTGTGCTGCACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGTGTCGCGTTTATTCGATGAAGCTGACCACACCACCTTCCAGCGACTTCACCCGGGCCAGCGATTCAACGCGGTAACCC             <  2:440820/150‑1                                                                                                                                                                     CCACAGGTACGGCACAGCGT‑TCGAGAC‑CTGTGCTGCACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGTGTCGCGTTGATTCGATGAAGCTGACCACACCACCTTCCAGCGACTTCACCCGGGCCAGCGATTCAACGCGGTAACCCTGGC         >  1:693182/1‑150                                                                                                                                                                       ACAGGTACGGCACAGCGT‑TCGAGAC‑CTGTGCTGCACCTGTGGGAGCGGGC                                                                                                           >  2:1811046/1‑50                                                                                                                                                                       ACAGGTACGGCACAGCGT‑TCGAGAC‑CTGTGCTGCACCTGTGGGAGCGGGC                                                                                                           <  1:1811046/50‑1                                                                                                                                                                         AGGTACGGCACAGCGT‑TCGAGAC‑CTGTGCTGCACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGTGTCGCGTTTATTCGATGAAGCTGACCACACCACCTTCCAGCGACTTCACCCGGGCCAGCGATTTATCGCGGTAACCCTGGCTGTC     <  2:2020302/150‑1                                                                                                                                                                         AGGTACGGCACAGCGT‑TCGAGAC‑CTGTGCTGCACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGTGTCGCGTTTATTCGATGAAGCTGACCACACCACCTTCCAGCGACTTCACC                                        >  2:827637/1‑115                                                                                                                                                                         AGGTACGGCACAGCGT‑TCGAGAC‑CTGTGCTGCACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGTGTCGCGTTTATTCGATGAAGCTGACCACACCACCTTCCAGCGACTTCACC                                        <  1:827637/115‑1                                                                                                                                                                           GTACGGCACAGCGT‑TCGAGAC‑CTGTGCTGCACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGTGTCGCGTTTATTCGATGAAGCTGACCACACCACCTTCCAGCGACTTCACCCGGGCCAGCGATTCAACGCGGTAACCCTGGCTGTCCA   >  1:1449322/1‑150                                                                                                                                                                           GTACGGCACAGCGT‑TCGAGAC‑CTGTGCTGCACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGTGTCGCGTTTATTCGATGAAGCTGACCACACCACCTTCCAGCGACTTCACCCGGGC                                   >  1:595550/1‑118                                                                                                                                                                           GTACGGCACAGCGT‑TCGAGAC‑CTGTGCTGCACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGTGTCGCGTTTATTCGATGAAGCTGACCACACCACCTTCCAGCGACTTCACCCGGGC                                   <  2:595550/118‑1                                                                                                                                                                            TACGGCACAGCGT‑TCGAGAC‑CTGTGCTGCACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGTGTCGCGTTTATTCGATGAAGCTGACCACACCACCTTCCAGCGACTTCACCCGGGCCAGCGATTCAACGCGGTAACCCTGGCTGTCCAG  >  1:740418/1‑150                                                                                                                                                                                                                                                                                                                                     GCGGGCCTGGGTATCGTGATCGAGAAGTCGTTCCAGGGCGGCCGTGCCGAACTGGACAGCCAGGGTTACCGCGTTGAATCGCTGGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/6013720‑6013891 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcgggcacgcccgctcccacaggtACGGCACAGCGT‑TCGAGAC‑CTGTGCTGCACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGTGTCGCGTTTATTCGATGAAGCTGACCACACCACCTTCCAGCGACTTCACCCGGGCCAGCGATTCAACGCGGTAACCCTGGCTGTCCAG  <  NC_002947/6013919‑6013771

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.