New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 6022690	69 (0.780)	8 (0.100)	7/234	NT	11.1%	coding (842/1293 nt)	PP_5273	oxidoreductase
	?	NC_002947	= 6022719	63 (0.750)					coding (871/1293 nt)	PP_5273	oxidoreductase

GCGCCAAGACCCTGGTACTGTGCTGCAACGCCTACCACAACGACCTCAATCGCGAGCTGGGCGGCAAGGTGCTGCCGGCCGGCAGCTACATCATCGCCACCGAGCCGCTGGGCGAAGAACGCGCACGCACATTGCTGCCGCAGAATATGGCGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/6022537‑6022690 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcggtAGTAGTCCAGCGCCACGCGCTGGTCACACACCGCCATATTCTGCGGCAGCAATGTGCGTGCGCGTTCTTCGCCCAGCGGCTCGGTGGCGATGATGTAGCTGCCGGCCGGCAGCACCTTGCCGCCCAGCTCGCGATTGAGGTCGTTGTG  <  NC_002947/6022719‑6022572                                                                                                                                                                                                                                                                                                                GCGCCAAGACCCTGGTACTGTGCTGCAACGCCTACCACAACGACCTCAATCGCGAGCTGGGCGGCAAGGTGCTGCCGGCCGGCAGCTACATCATCGCCACCGAGCCGCTGGGCGAAGAACGCGCACGCACATTGCTGCCGCAGAATATGG                                                                                                                                                          >  2:324083/1‑150     CAAGACCCTGGTACTGTGCTGCAACGCCTACCACAACGACCTCAATCGCGAGCTGGGCGGCAAGGTGCTGCCGGCCGGCAGCTACATCATCGCCACCGAGCCGCTGGGCGAAGAACGCGCACGCACATTGCTGCCGCAGAATATGGCGGT                                                                                                                                                      >  1:1794441/1‑150                   TGTGCTGCAACGCCTACCACAACGACCTCAATCGCGAGCTGGGCGGCAAGGTGCTGCCGGCCGGCAGCTACATCATCGCCACCGAGCCGCTGGGCGAAGAACGCGCACGCACATTGCTGCCGCAGAATATGGCGGTAGTAGTCCAGCGCC                                                                                                                                        >  2:1957018/1‑150                                   ccacccCGACCTCAATCGCGAGCTGGGCGGCAAGGTGCTGCCGGCCGGCAGCTACATCATCGCCACCGAGCCGCTGGGCGAAGAACGCGCACGCACATTGCTGCCGCAGAATATGGCGGT                                                                                                                                                      <  2:396906/114‑1                                   CCACAACGACCTCAATCGCGAGCTGGGCGGCAAGGTGCTGCCGGCCGGCAGCTACATCATCGCCACCGAGCCGCTGGGCGAAGAACGCGCACGCACATTGCTGCCGCAGAATATGGCGGT                                                                                                                                                      >  1:396906/1‑120                                        ACGACCTCAATCGCGAGCTGGTCGGCAAGGTGCTGCCGGCCGGCAGCTACATCATCGCCACCGAGCCGCTGGGCGAAGAACGCGCACGCACATTGCTGCCGCAGAATATGGCGGTAGTAGTCCAGCGCCACGGGCTGGTCACACACCGCC                                                                                                                   <  2:1237580/150‑1                                         CGACCTCAATCGCGAGCTGGGCGGCAAGGTGCTGCCGGCCGGCAGCTACATCATCGCCACCGAGCCGCTGGGCGAAGAACGCGCACGCACATTGCTGCCGCAGAATATGGCGGTAGTAGTCCAGCGCCACGCGCTGGTCACACACCGCCA                                                                                                                  <  1:679411/150‑1                                           ccacccATCGGGAGCCGGGCTGTAAGGTGCTGCCGGCCGGCAGCTACATCATCGCCACCGAGCCGCTGGGCGAAGAACGCGCACGCACATTGCTGCCGCAGAATATGGCGGTAGTAGTCCAGCGCCACGCGCTGGTCACACACCGCCATA                                                                                                                <  2:1944266/144‑1                                           ACCTCAATCGCGAGCTGGGCGGCAAGGTGCTGCCGGCCGGCAGCTACATCATCGCCACCGAGCCGCTGGGCGAAGAACGCGCACGCACATTGCTGCCGCAGAATATGGCGGTAGTAGTCCAGCGCCACGCGCTGGTCACACACCGCCATA                                                                                                                <  1:1957018/150‑1                                                     CGAGCTGGGCGGCAAGGTGCTGCCGGCCGGCAGCTACATCATCGCCACCGAGCCGCTGGGCGAAGAACGCGCACGCCAATTGCTGCCGAAGAATGTTGCAGGTGGACGCCAGCTCCACGCGCTGGTCACACACCGCCATATTCTGCGGCA                                                                                                      <  1:657328/150‑1                                                             GCGGCAAGGTGCTGCCGGCCGGCAGCTACATCATCGCCACCGAGCCGCTGGGCGAAGAACGCGCACGCACATTGCTGCCGCAGAATATGGCGGTAGTAGTCCAGCGCCACGCGCTGGTCACACAC                                                                                                                       >  1:810816/1‑125                                                             GCGGCAAGGTGCTGCCGGCCGGCAGCTACATCATCGCCACCGAGCCGCTGGGCGAAGAACGCGCACGCACATTGCTGCCGCAGAATATGGCGGTAGTAGTCCAGCGCCACGCGCTGGTCACACAC                                                                                                                       <  2:810816/125‑1                                                                                                                                                      GCGGTAGTAGTCCAGCGCCACGCGCTGGTCACACACCGCCATATTCTGCGGCAGCAATGTGCGTGCGCGTTCTTCGCCCAGCGGCTCGGTGGCGATGATGTAGCTGCCGGCCGGCAGCACCTTGCCGCCCATCTCGCTATTGAGGTCGTT     <  2:1419649/150‑1                                                                                                                                                      GCGGTAGTAGTCCAGCGCCACGCGCTGGTCACACACCGCCATATTCTGCGGCAGCAATGTGCGTGCGCGTTCTTCGCCCAGCGGCTCGGTGGCGATGATGTA                                                     >  1:96153/1‑102                                                                                                                                                      GCGGTAGTAGTCCAGCGCCACGCGCTGGTCACACACCGCCATATTCTGCGGCAGCAATGTGCGTGCGCGTTCTTCGCCCAGCGGCTCGGTGGCGATGATGTA                                                     <  2:96153/102‑1                                                                                                                                                        GGTAGTAGTCCAGCGCCACGCGCTGGTCACACACCGCCATATTCTGCGGCAGCAATGTGCGTGCGCGTTCTTCGCCCAGCGGCTCGGTGGCGATGATGTAGCTGCCGGCCGGCAGCACCTTGCCGCCCAGCTCGCGATTGAGGTCGTTGT   <  1:1361121/150‑1                                                                                                                                                         GTAGTAGTCCAGCGCCACGCGCTGGTCACACACCGCCATATTCTGCGGCAGCAATGTGCGTGCGCGTTCTTCGCCCAGCGGCTCGGTGGCGATGATGTAGCTGCCGGCCGGCAGCACCTTGCCGCCCAGCTCGCGATTGAGGTCGTTGTG  <  2:2386551/150‑1                                                                                                                                                         GTAGTAGTCCAGCGCCACGCGCTGGTCACACACCGCCATATTCTGCGGCAGCAATGTGCGTGCGCGTTCTTCGCACAGCGGCTCGGTGGCGATGATGTAGCTGCCGACCGGCAGCACCTTGCCGCCCAGCTCGCGATTGAGGTCGTTGTG  >  2:1004262/1‑150                                                                                                                                                                                                                                                                                                                GCGCCAAGACCCTGGTACTGTGCTGCAACGCCTACCACAACGACCTCAATCGCGAGCTGGGCGGCAAGGTGCTGCCGGCCGGCAGCTACATCATCGCCACCGAGCCGCTGGGCGAAGAACGCGCACGCACATTGCTGCCGCAGAATATGGCGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/6022537‑6022690 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcggtAGTAGTCCAGCGCCACGCGCTGGTCACACACCGCCATATTCTGCGGCAGCAATGTGCGTGCGCGTTCTTCGCCCAGCGGCTCGGTGGCGATGATGTAGCTGCCGGCCGGCAGCACCTTGCCGCCCAGCTCGCGATTGAGGTCGTTGTG  <  NC_002947/6022719‑6022572

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.