| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 6103431 = | 116 (1.310) | 8 (0.090) | 7/238 | NT | 6.7% | coding (208/855 nt) | PP_5353 | hypothetical protein |
| ? | NC_002947 | 6103462 = | 110 (1.280) | coding (239/855 nt) | PP_5353 | hypothetical protein | |||||
CTGCTGCTGGCGACGGCGCGCGGCGATGAAGCGGAACACGAGGAAGGCGATGAGCGCCACGATCAGGAAGTCCATGATCTGGAAGCCTTCGAAACCGTCGCCCATGAACATGGAAGCCAGCAGGCCACCGGCGGCGAGGCCGGCCAGTGGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6103583‑6103431‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccTGCTGGCTTCCATGTTCATGGGCGACGGTTTCGAAGGCTTCCAGATCATGGACTTCCTGATCGTGGCGCTCATCGCCTTCCTCGTGTTCCGCTTCATCGCCGCGCGCCGTCGCCAGCAGCAGCCGCAAATGGCCATGCCAGGCCATGC > NC_002947/6103462‑6103609 CTGCTGCTGGCGACGGCGCGCGGCGATGAAGCGGAACACGAGGAAGGCGATGAGCGCCACGATCAGGAAGTCCATGATCTGGAAGCCTTCGAAACCGTCGCCCATGAACATGGAAGCCAGCAGGCCACCGGCGGCGAGGCCGGCCAGTGG < 1:2398934/150‑1CTGCTGCTGGCGACGGCGCGCGGCGATGAAGCGGAACACGAGGAAGGCGATGAGCGCCACGATCAGGAAGTCCATGATCTGGAAGCCTTCGAAACCGTCGCCCATGAACATGGAAGCCAGCAGGCCACCGGCGGCGAGGCCGGCCAGTGG < 1:576641/150‑1 TGCTGCTGGCGACGGCGCGCGGCGATGAAGCGGAACACGAGGAAGGCGATGAGCGCCACGATCAGGAAGTCCATGATCTGGAAGCCTTCGAAACCGTCGCCCATGAACATGGAAGCCAGCAGGCCACCGGCGGCGAGGCCGGCCAGTGGG > 1:1900907/1‑150 TGCTGCTGGCGACGGCGCGCGGCGATGAAGCGGAACACGAGGAAGGCGATGAGCGCCACGATCAGGAAGTCCATGATCTGGAAGCCTTCGAAACCGTCGCCCATGAACATGGAAGCCAGCAGGCCACCGGCGGCGAGGCCGGCCAGTGGG > 2:1274002/1‑150 CCATGAACATGGAAGCCAGCAGGCCACCGGCGGCGAGGCCGGCCAGTGGGCCTGCTGGCTTCCATGTTCATGGGCGACGGTTTCGAAGGCTTCCAGATCATGGACTTCCTGATCGTGGCGCTCATCGCC < 1:1791033/129‑1 CCATGAACATGGAAGCCAGCAGGCCACCGGCGGCGAGGCCGGCCAGTGGGCCTGCTGGCTTCCATGTTCATGGGCGACGGTTTCGAAGGCTTCCAGATCATGGACTTCCTGATCGTGGCGCTCATCGCC > 2:1791033/1‑129 CCATGAACATGGAAGCCAGCAGGCCACCGGCGGCGAGGCCGGCCAGT‑GGCCTGCTGGCTTCCATGTTCATGGGCGACGGTTTCGAAG < 1:1472278/87‑1 CCATGAACATGGAAGCCAGCAGGCCACCGGCGGCGAGGCCGGCCAGT‑GGCCTGCTGGCTTCCATGTTCATGGGCGACGGTTTCGAAG > 2:1472278/1‑87 CAGCAGGCCACCGGCGGCGAGGCCGGCCAGTGGGCCTGCTGGCTTCCATGTTCATGGGCGACGGTTTCGAAGGCTTCCAGATCATGGACTTCCTGATCGTGGCGCTCATCGCCTTCCTCGT > 1:121654/1‑121 CAGCAGGCCACCGGCGGCGAGGCCGGCCAGTGGGCCTGCTGGCTTCCATGTTCATGGGCGACGGTTTCGAAGGCTTCCAGATCATGGACTTCCTGATCGTGGCGCTCATCGCCTTCCTCGT < 2:121654/121‑1 GCAGGCCACCGGCGGCGAGGCCGGCCAGTGGG‑CTGCTGGCTTCCATGTTCATGGGCGACGGTTTCGAAGGCTTCCAGATCATGGACTTCCTGATCGTGGCGCTCATCGCCTTCCTCGTGTTCCGCT > 1:739409/1‑126 GCAGGCCACCGGCGGCGAGGCCGGCCAGTGGG‑CTGCTGGCTTCCATGTTCATGGGCGACGGTTTCGAAGGCTTCCAGATCATGGACTTCCTGATCGTGGCGCTCATCGCCTTCCTCGTGTTCCGCT < 2:739409/126‑1 GCCTGCTGGCTTCCATGTGCATGGGCGACGGTTTCGAAGGCTTCCAGATCATGGACTTCCTGATCGTGGCGCTCATCGCCTTCCTCGTGTTCCGCTTCATCGCCGCGCGCCGTCGCCAGCAGCAGCCGCAAATGGCCATGCCAGGCCATG < 2:2111291/150‑1 CCTGCTGGCTTCCATGTTCATGGGCGACGGTTTCGAAGGCTTCCAGATCATGGACTTCCTGATCGTGGCGCTCATCGCCTTCCTCGTGTTCCGCTTCATCGCCGCGCGCCGTCGCCAGCAGCAGCCGCAAATGGCCATGCCAGGCCATGC < 2:576641/150‑1 CTGCTGCTGGCGACGGCGCGCGGCGATGAAGCGGAACACGAGGAAGGCGATGAGCGCCACGATCAGGAAGTCCATGATCTGGAAGCCTTCGAAACCGTCGCCCATGAACATGGAAGCCAGCAGGCCACCGGCGGCGAGGCCGGCCAGTGGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6103583‑6103431‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccTGCTGGCTTCCATGTTCATGGGCGACGGTTTCGAAGGCTTCCAGATCATGGACTTCCTGATCGTGGCGCTCATCGCCTTCCTCGTGTTCCGCTTCATCGCCGCGCGCCGTCGCCAGCAGCAGCCGCAAATGGCCATGCCAGGCCATGC > NC_002947/6103462‑6103609 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |