New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 41413785 (0.960)10 (0.120) 10/230 NT 10.8% intergenic (+154/‑49) glnE/waaF glutamate‑ammonia‑ligase adenylyltransferase/ADP‑heptose:LPS heptosyltransferase II
?NC_002947 = 414158 86 (1.040)intergenic (+175/‑28) glnE/waaF glutamate‑ammonia‑ligase adenylyltransferase/ADP‑heptose:LPS heptosyltransferase II

Only 100 of 121 total aligned reads displayed.

GCAAGCCCGCTCCCACAGGTACTGCACAGGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAGCTGGGTCGGCGACATGGTGATGGCGCAGACCCTGTTCCAGTGCCTGAAACAGCAGCACCCCGACTGCGTGATCG  >  NC_002947/414006‑414285
                                                                                                                                   |                                                                                                                                                    
gCAAGCCCGCTCCCACAGGTACTGCACAGGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCt                                                                                                                                    >  1:2099590/1‑150 (MQ=255)
     cccGCTCCCACAGGTACTGCACAGGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAgc                                                                                                                               <  1:2165095‑M2/150‑3 (MQ=255)
      ccGCTCCCACAGGTACTGCACAGGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAgcc                                                                                                                              <  2:2186971‑M2/150‑4 (MQ=255)
      ccGCTCCCACAGGTACTGCACAGGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAgcc                                                                                                                              <  1:1798865‑M2/150‑4 (MQ=255)
       cGCTCCCACAGGTACTGCACAGGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAgcct                                                                                                                             <  1:753333‑M2/150‑5 (MQ=255)
            ccACAGGTACTGCACAGGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTa                                                                                                                                             <  1:1075125/129‑1 (MQ=255)
            ccACAGGTACTGCACAGGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTa                                                                                                                                             >  2:1075125/1‑129 (MQ=255)
              acaGGTACTGCACAGGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGTCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAg                                                                                                                      >  2:374870/1‑150 (MQ=255)
              acaGGTACTGCACAGGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAgcctccc                                                                                                                          <  1:1339608‑M2/146‑8 (MQ=255)
              acaGGTACTGCACAGGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAgcctccc                                                                                                                          >  2:1339608‑M2/1‑139 (MQ=255)
              acaGGTACTGCACAGGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCACGAg                                                                                                                      >  1:796375/1‑150 (MQ=255)
                  gTACTGCACAGGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTa                                                                                                                                 <  1:1462714/135‑1 (MQ=255)
                  gTACTGCACAGGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTa                                                                                                                                 >  2:1462714/1‑135 (MQ=255)
                     cTGCACAGGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCtacaggctgcggtacagcctggcctccc                                                                                                                          >  2:1104738‑M1/1‑111 (MQ=255)
                     cTGCACAGGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCtacaggctgcggtacagcctggcctccc                                                                                                                          <  1:1104738‑M1/139‑29 (MQ=255)
                      tGCACAGGCCGTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGGATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTg                                                                                                              <  1:1814317/150‑1 (MQ=255)
                      tGCACAGGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTg                                                                                                              <  2:2099590/150‑1 (MQ=255)
                       gCACAGGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTgg                                                                                                             <  1:2146012/150‑1 (MQ=255)
                        cacaGGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCtacaggctgcggtacagcctggc                                                                                                                               >  1:1960841‑M1/1‑108 (MQ=255)
                        cacaGGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCtacaggctgcggtacagcctggc                                                                                                                               <  2:1960841‑M1/131‑24 (MQ=255)
                        cacaGGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGa                                                                                                            >  2:989811/1‑150 (MQ=255)
                         acaGGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGAc                                                                                                           >  1:999263/1‑150 (MQ=255)
                         acaGGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGAc                                                                                                           >  2:1017218/1‑150 (MQ=255)
                                       gtgtGCAATCCCTGTCGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGCTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCCCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATa                                                                                             <  1:879184/150‑1 (MQ=255)
                                        tgtgCAGTACCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATAc                                                                                            <  1:388442/150‑1 (MQ=255)
                                        tgtgCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATAc                                                                                            <  2:2165095/150‑1 (MQ=255)
                                           gCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGa                                                                                         >  1:1000488/1‑150 (MQ=255)
                                             aaTCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATc                                                                                       >  2:488631/1‑150 (MQ=255)
                                             aaTCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACAAAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAACCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATc                                                                                       >  2:762008/1‑150 (MQ=255)
                                              aTCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGAc                                                                                                           >  1:1010242/1‑129 (MQ=255)
                                              aTCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGAc                                                                                                           <  2:1010242/129‑1 (MQ=255)
                                                 ccTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCcaggctgcggtacagcctg                                                                                                                                   >  2:2346853‑M1/1‑83 (MQ=255)
                                                        gAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTg                                                                                                              <  1:335392/116‑1 (MQ=255)
                                                        gAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTg                                                                                                              >  2:335392/1‑116 (MQ=255)
                                                               cTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAGCTGGGTc                                                                     <  1:2186971/150‑1 (MQ=255)
                                                                   cccGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATAc                                                                                            <  2:16467/123‑1 (MQ=255)
                                                                    ccGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAGCTGGGTCTGCgc                                                                >  1:1726532/1‑149 (MQ=255)
                                                                    ccGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAGCTGGGTCGGCGa                                                                >  2:1000927/1‑150 (MQ=255)
                                                                    ccGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAGCTGGGTCGGCGa                                                                >  1:253960/1‑150 (MQ=255)
                                                                    ccGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAGCTGGGTCGGCGa                                                                >  1:2149926/1‑150 (MQ=255)
                                                                    ccGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAGCTGGGTCGGCGa                                                                >  1:122550/1‑150 (MQ=255)
                                                                    ccGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAGCTGGGTCGGCGa                                                                >  2:1150495/1‑150 (MQ=255)
                                                                     cgcgAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGc                                                                                                                                      >  1:435261/1‑79 (MQ=255)
                                                                     cgcgAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGc                                                                                                                                      <  2:435261/79‑1 (MQ=255)
                                                                      gcgAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCATCCTGTAGCCTCCCCGAGCGGTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAGCTGCGTCGGCGAct                                                              >  1:1929007/1‑149 (MQ=255)
                                                                      gcgAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATTAGAATACTGATCATTGGCCCCAGCTGGGTCGGCGACa                                                              >  1:1079051/1‑150 (MQ=255)
                                                                       agAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATTAAGAGGGGAGGCCAGGCTGTACCGCAGCTTGTAGCTTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAGCTGGGTCGGCGACAt                                                             <  2:567406/149‑1 (MQ=255)
                                                                        gAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAGCTGGGTCGGCGACATg                                                            <  2:253960/150‑1 (MQ=255)
                                                                             ggCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCtacaggctgcggtacagcctggcctcccctctttatattcagg                                                                                                           <  2:2212222‑M1/98‑44 (MQ=255)
                                                                             ggCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCtacaggctgcggtacagcctggcctcccctctttatattcagg                                                                                                           >  1:2212222‑M1/1‑55 (MQ=255)
                                                                             ggCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAGCTGGGTCGGCGACATGGTGAt                                                       >  1:2265539/1‑150 (MQ=255)
                                                                             ggCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAGCTGGGTCGGCGACATGGTGAt                                                       <  1:1150495/150‑1 (MQ=255)
                                                                              gCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCtacaggctgcggtacagcctggcctcccctct                                                                                                                      >  2:128195‑M1/1‑54 (MQ=255)
                                                                              gCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCtacaggctgcggtacagcctggcctcccctct                                                                                                                      <  1:128195‑M1/86‑33 (MQ=255)
                                                                              gCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGa                                                                                                                       >  1:2373483/1‑85 (MQ=255)
                                                                              gCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGa                                                                                                                       <  2:2373483/85‑1 (MQ=255)
                                                                              gCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAGCTGGGTCGGCGACATGGTGATg                                                      >  2:833238/1‑150 (MQ=255)
                                                                                      aGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAGCTGGGTCGGCGACATGGTGATGGCGCAGAc                                              >  2:1564320/1‑150 (MQ=255)
                                                                                         ggTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGt                                                                                                                                  <  1:2023827/63‑1 (MQ=255)
                                                                                         ggTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGt                                                                                                                                  >  2:2023827/1‑63 (MQ=255)
                                                                                          gTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAGCTGGGTCGGCGACATGGTGATGGCGCAGACCCTg                                          >  1:247645/1‑150 (MQ=255)
                                                                                          gTACACTGTCCGCCACATAGCCCGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTgg                                                                                  <  1:939996/110‑1 (MQ=255)
                                                                                          gTACACTGTCCGCCACATAGCCCGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTgg                                                                                  >  2:939996/1‑110 (MQ=255)
                                                                                            acacTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAGCTGGGTCGGCGACATGGTGATGGCGCAGACCCTGtt                                        <  1:488631/150‑1 (MQ=255)
                                                                                             cacTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGa                                                                                         <  2:2128346/100‑1 (MQ=255)
                                                                                             cacTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGa                                                                                         >  1:2128346/1‑100 (MQ=255)
                                                                                               cTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCATGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAGCTGGGTCGGCGACATGGTGATGGCGCAGACCCTGTTCCa                                     <  2:1310265/150‑1 (MQ=255)
                                                                                                     gCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCTTTTCTGGa                                                                                                            <  2:197477/73‑1 (MQ=255)
                                                                                                     gCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCTTTTCTGGa                                                                                                            >  1:197477/1‑73 (MQ=255)
                                                                                                         caTAGCCTGAATATAAAGAGGGGAGGCCATGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAGCTGGGTCGGCGACATGGTGATGGCGCAGACCCTGTTCCAGTGCCTGaaa                           <  1:374870/150‑1 (MQ=255)
                                                                                                          aTAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATga                                                                                                  <  2:1394619/78‑1 (MQ=255)
                                                                                                          aTAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATga                                                                                                  >  1:1394619/1‑78 (MQ=255)
                                                                                                              ccTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAgcctcccctctttatattcaggctatgtggcggacagtgtaccactcacatggcc                                                                          <  2:2212222‑M2/98‑56 (MQ=255)
                                                                                                              ccTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAgcctcccctctttatattcaggctatgtggcggacagtgtaccactcacatggcc                                                                          >  1:2212222‑M2/1‑43 (MQ=255)
                                                                                                              ccTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAGCTGGGTCGGCGACATGGTGATGGCGCAGACCCTGTTCCAGTGCCTGAAAcagca                      <  2:247645/150‑1 (MQ=255)
                                                                                                               cTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAGCTGGGTCGGCGACATGGTGATGGCGCAGACCCTGTTCCAGTGCCTGAAAcagcag                     >  1:89970/1‑150 (MQ=255)
                                                                                                               cTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAGCTGGGTCGGCGACATGGTGATGGCGCAGACCCTGTTCCAGTGCCTGAAAcagcag                     >  1:234834/1‑150 (MQ=255)
                                                                                                                tGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAGCTGGGTCGGCGACATGGTGATGGCGCAGACCCTGTTCCAGTGCCTGAAACagcagc                    >  2:2386611/1‑150 (MQ=255)
                                                                                                                tGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAGCTGGGTCGGCGACATGGTGATGGCGCAGACCCTGTTCCAGTGCCTGAAACagcagc                    <  1:1000927/150‑1 (MQ=255)
                                                                                                                    tataAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAGCTGGGTCGGCGACATGGTGATGGCGCAGACCCTGTTCCAGTGCCTGAAACAGCAGCAccc                >  2:1264169/1‑150 (MQ=255)
                                                                                                                     ataAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAGCTGGGTCGGCGACATGGTGATGGCGCAGACCCTGTTCCAGTGCCTGAAACAGCAGCAcccc               >  2:1531883/1‑150 (MQ=255)
                                                                                                                         agagGGGAGGCCAGGCTGTACCGCAGCCTGTAgcctcccctctttatattcaggctatgtggcggacagtgtaccactcacatggc                                                                           >  2:128195‑M2/1‑32 (MQ=255)
                                                                                                                         agagGGGAGGCCAGGCTGTACCGCAGCCTGTAgcctcccctctttatattcaggctatgtggcggacagtgtaccactcacatggc                                                                           <  1:128195‑M2/86‑55 (MQ=255)
                                                                                                                           agGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACt                                                                                           >  1:1021180/1‑68 (MQ=255)
                                                                                                                           agGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACt                                                                                           <  2:1021180/68‑1 (MQ=255)
                                                                                                                             gggAGGCtacaggctgcggtacagcctggcctcccctctttatattcaggctatgtggcggacagtgtaccactcacatggcctattcgcgggcaagcccgctcccacagggattgcacactgctcagggcctgtgcagtacctgt           <  1:1339608‑M1/146‑140 (MQ=255)
                                                                                                                             gggAGGCCAGGCTGTACCGCAGCCTGTAgcctcccctctttatattcaggctatgtggcggacagtgtaccactcacatggcctattcgcgggcaagcccgctcccacagggattgcacactgctcagggcctgtgcag                  <  1:1104738‑M2/139‑112 (MQ=255)
                                                                                                                             gggAGGCCAGGCTGTACCGCAGCCTGTAgcctcccctctttatattcaggctatgtggcggacagtgtaccactcacatggcctattcgcgggcaagcccgctcccacagggattgcacactgctcagggcctgtgcag                  >  2:1104738‑M2/1‑28 (MQ=255)
                                                                                                                             gggAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAGCTGGGTCGGCGACATGGTGATGGCGCAGACCCTGTTCCa                                     <  1:1875987/120‑1 (MQ=255)
                                                                                                                             gggAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAGCTGGGTCGGCGACATGGTGATGGCGCAGACCCTGTTCCa                                     >  2:1875987/1‑120 (MQ=255)
                                                                                                                             gggAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAGCTGGGTCGGCGACATGGTGATGGCACAGACCCTGTTCCAGTGCCTGAAACAGCAGCACCCCGACTGCGt       <  1:1024344/150‑1 (MQ=255)
                                                                                                                                 ggCtacaggctgcggtacagcctggcctcccctctttatattcaggctatgtggcggacagtgtaccactcacatggcctattcgcgggcaagcccgctcccacagggattgcacactgctcagggcctgtgcagtacctgtgggagcgg   <  2:2146012‑M1/150‑148 (MQ=255)
                                                                                                                                 ggCtacaggctgcggtacagcctggcctcccctctttatattcaggctatgtggcggacagtgtaccactcacatggcctattcgcgggcaagcccgctcccacagggattgcacactgctcagggcctgtgcagtacctgtgggagcgg   <  1:1798865‑M1/150‑148 (MQ=255)
                                                                                                                                 ggCtacaggctgcggtacagcctggcctcccctctttatattcaggctatgtggcggacagtgtaccactcacatggcctattcgcgggcaagcccgctcccacagggattgcacactgctcagggcctgtgcagtacctgtgggagcgg   <  2:2186971‑M1/150‑148 (MQ=255)
                                                                                                                                 ggCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAGCTGGGTCGGCGACATGGTGATGGCGCAGACCCTGTTCCAGTGCCTGAAACAGCAGCACCCCGACTGCGTGATc   <  1:1264169/150‑1 (MQ=255)
                                                                                                                                  gCCAGGCTGTACCGCAGCCTGTAgcctcccctctttatattcaggctatgtggcggacagtgtaccactcacatggcctattcgcgggcaagcccgctcccacagggattgcacactgctcagggcctgtg                     >  1:1960841‑M2/1‑23 (MQ=255)
                                                                                                                                  gCCAGGCTGTACCGCAGCCTGTAgcctcccctctttatattcaggctatgtggcggacagtgtaccactcacatggcctattcgcgggcaagcccgctcccacagggattgcacactgctcagggcctgtg                     <  2:1960841‑M2/131‑109 (MQ=255)
                                                                                                                                  gCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAGCTGGGTCGGCGACATg                                                            >  1:1255919/1‑92 (MQ=255)
                                                                                                                                  gCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAGCTGGGTCGGCGACATg                                                            <  2:1255919/92‑1 (MQ=255)
                                                                                                                                  gCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGAATGAGAGTACGTATCATTGGCCCCAGCTGGGTCGGCGACATGGTGATGGCGCAGACCCTGTTCCAGTGCCTGAAACAGCAGCACCCCGACTGCGTGATCg  >  1:1500301/1‑150 (MQ=255)
                                                                                                                                   |                                                                                                                                                    
GCAAGCCCGCTCCCACAGGTACTGCACAGGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAGCTGGGTCGGCGACATGGTGATGGCGCAGACCCTGTTCCAGTGCCTGAAACAGCAGCACCCCGACTGCGTGATCG  >  NC_002947/414006‑414285

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.