New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 114993267 (0.760)8 (0.100) 6/230 NT 10.6% intergenic (‑173/+84) PP_1008/gapA RNA polymerase subunit sigma‑24/glyceraldehyde‑3‑phosphate dehydrogenase
?NC_002947 = 1149995 72 (0.870)intergenic (‑236/+21) PP_1008/gapA RNA polymerase subunit sigma‑24/glyceraldehyde‑3‑phosphate dehydrogenase

Only 100 of 108 total aligned reads displayed.

GATAATGCTTATCATCCGTGCGGCAGGTCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGTTGTC  >  NC_002947/1149788‑1150081
                                                                                                                                                 |                                                                                                                                                     
gATAATGCTTATCATCCGTGCGGCAGGTCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGGAGCGGGCtt                                                                                                                                                   >  2:1775033/1‑150 (MQ=255)
gATAATGCTTATCATCCGTGCGGCAGGTCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTg                                                                                                                                                  >  1:382782/1‑150 (MQ=255)
  tAATGCTTATCATCCGTGCGGCAGGTCAAGTGTGGAATTATCCACCCCAGCTACAACCACGGCACAGGGCAGTCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGcc                                                                                                                                                <  1:285580/150‑1 (MQ=12)
        ttATCATCCGTGCGGCAGGTCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGaa                                                                                                                                          >  1:1620026/1‑150 (MQ=255)
        ttATCATCCGTGCGGCAAGTCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTTCCCGCGaa                                                                                                                                          >  1:1179952/1‑150 (MQ=255)
         tATCATCCGTGCGGCAGGTCAAGGGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCAAGCCcgctccc                                                                                                                                         <  2:1151019/150‑5 (MQ=37)
             agccGTGCGGCAGGTCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACgg                                                                                                                                     >  2:1610940/3‑150 (MQ=255)
              tcCGTGCGGCAGGTCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCcgc                                                                                                                                             <  2:810800/141‑1 (MQ=255)
              tcCGTGCGGCAGGTCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACggg                                                                                                                                    <  1:661661/150‑1 (MQ=255)
               ccGTGCGGCAGGTCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGc                                                                                                                                   <  2:1439520/150‑1 (MQ=255)
               ccGTGCGGCAGGTCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGc                                                                                                                                   <  1:1814108/150‑1 (MQ=255)
                  tGCGGCAGGTCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAACAGATGGCGCGATCCCT‑GGGGGCGCCGGCTTGCCCGCGAACACGGGGGaa                                                                                                                                <  2:94941/150‑1 (MQ=38)
                   ccgggccaacgggcggatgctcaaggtgctggcctggtatgacaacgagtgggggttcagcaaccggatgctggacaactgcctggcgctgcaccgggctgGCTGACGCGACCCGT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAg                                                                                                                               <  1:958302‑M1/49‑1 (MQ=255)
                             aaGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGACCCGT‑GTGGGAGCGGccttgcccgcgaagccaacaccgtggtggatggc                                                                                                                     >  2:2323386‑M1/1‑116 (MQ=255)
                               gtgtGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATcc                                                                                                                   <  1:2205402/150‑1 (MQ=255)
                                     aaTTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTGTTGCTCAATTGCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCCAACACTCAGGACGCCGGTGCCATCCACCACg                                                                                                             >  1:125910/1‑150 (MQ=25)
                                      aTTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACgg                                                                                                            <  1:2062940/150‑1 (MQ=255)
                                       ttATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGgt                                                                                                           >  2:1824518/1‑150 (MQ=255)
                                          tCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCtt                                                                                                                                                   >  1:1443143/1‑107 (MQ=255)
                                          tCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCtt                                                                                                                                                   <  2:1443143/107‑1 (MQ=255)
                                           cAGGAAAAGGTAAAGATTGTAGTCACTGGATGCAGTTCGCCTCATCAGCTAGCTACTGTTGTGCTCAATTTCTAACAGCGGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTg                                                                                                       <  1:542076/150‑1 (MQ=17)
                                                   ggTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGgcttgcccgcgaagccaacaccgtggtggatggcacgggcttcgcccgtgttcgcg                                                                                               <  2:1993211‑M1/150‑57 (MQ=255)
                                                    gTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGccttgcccgcgaagccaacaccgtggtggatggcacgggcttcgcccgtgttcgcgg                                                                                              >  1:351104‑M1/1‑93 (MQ=255)
                                                    gTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGtt                                                                                                        <  2:2189223/140‑1 (MQ=255)
                                                    gTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGtt                                                                                                        >  1:2189223/1‑140 (MQ=255)
                                                    gTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCgg                                                                                              >  1:1094394/1‑150 (MQ=255)
                                                    gTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCgg                                                                                              >  2:2049961/1‑150 (MQ=255)
                                                    gTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGATCGCAACTTTGTTGATCTATTTTTAAAAGCTGGCGCGATCACT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATACACCACGGTATTGGCttggtgg                                                                                              >  2:83977/1‑145 (MQ=18)
                                                    ctggtatgacaacgagtgggggttcagcaaccggatgctggacaactgcctggcgctgcaccgggctgGCTGACGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCgg                                                                                              >  1:2362992‑M1/69‑150 (MQ=255)
                                                    ctggtatgacaacgagtgggggttcagcaaccggatgctggacaactgcctggcgctgcaccgggctgGCTGACGCGACCCGT‑GTGGGAGCGGCCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCgg                                                                                              >  1:95482‑M1/69‑150 (MQ=255)
                                                      aaaGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGc                                                                                            >  2:1249938/1‑150 (MQ=255)
                                                       aaGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCa                                                                                           >  1:311329/1‑150 (MQ=255)
                                                          aTTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGACCCGT‑GTGGGAGCGGccttgcccgcgaagccaacaccgtggtggatggcacgggcttcgcccgtgttcgcgggcaagc                                                                                        <  1:2323386‑M1/150‑64 (MQ=255)
                                                           ttGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGc                                                                                       >  2:1446565‑M2/1‑149 (MQ=255)
                                                           gacaacgagtgggggttcagcaaccggatgctggacaactgcctggcgctgcaccgggctgGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGc                                                                                       >  1:135328‑M1/62‑150 (MQ=255)
                                                            tGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGccttgcccgcgaagccaacaccgtggtggatggcacgggcttcgcccgtgttcgcgggcaagccc                                                                                      <  2:351104‑M1/150‑66 (MQ=255)
                                                            acaacgagtgggggttcagcaaccggatgctggacaactgcctggcgctgcaccgggctgGCTGACGCGACCCGT‑GTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCgg                                                                                              <  1:1472301‑M1/82‑1 (MQ=255)
                                                            acaacgagtgggggttcagcaaccggatgctggacaactgcctggcgctgcaccgggctgGCTGACGCGACCCGT‑GTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCgg                                                                                              >  2:1472301‑M1/61‑142 (MQ=255)
                                                                 tCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGccgctcc                                                                                 >  1:1824518‑M2/1‑143 (MQ=255)
                                                                     tGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCcaca                                                                             <  1:2049961/150‑1 (MQ=255)
                                                                        gtGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTTCTCAATTTCTGCGACCTGGCGCGATCCCT‑GGGGGAGCGGGGTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCGCGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACgg                                                                          <  1:264647/149‑1 (MQ=21)
                                                                         gttcagcaaccggatgctggacaactgcctggcgctgcaccgggctgGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACggg                                                                         <  1:1190760‑M1/103‑1 (MQ=255)
                                                                            cGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTcg                                                                      >  1:809105/1‑150 (MQ=255)
                                                                             gTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTcgc                                                                     <  1:1991063/150‑1 (MQ=255)
                                                                               ttGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGt                                                                   <  2:1007034/150‑1 (MQ=255)
                                                                               ttGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGt                                                                   <  1:1249938/150‑1 (MQ=255)
                                                                               ttGCTTTTTTTGGGAGCAACTGTCTCGTGGCATGTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTcgcgg                                                                   >  1:1642902/1‑149 (MQ=21)
                                                                                tGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTc                                                                  >  2:1779702/1‑150 (MQ=255)
                                                                                 gCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTca                                                                 >  1:735638/1‑150 (MQ=255)
                                                                                 accggatgctggacaactgcctggcgctgcaccgggctgGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTca                                                                 >  2:1535524‑M1/40‑150 (MQ=255)
                                                                                 accggatgctggacaactgcctggcgctgcaccgggctgGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTca                                                                 >  2:1190760‑M1/40‑150 (MQ=255)
                                                                                   tttttttGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCca                                                                               <  2:2262272/134‑1 (MQ=255)
                                                                                   tttttttGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCca                                                                               >  1:2262272/1‑134 (MQ=255)
                                                                                   tttttttGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCAGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTcagc                                                               >  2:597211/1‑150 (MQ=255)
                                                                                     gatgctggacaactgcctggcgctgcaccgggctgGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTcagcca                                                             >  2:1107008‑M1/36‑150 (MQ=255)
                                                                                            gAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGc                                                                                                                                   >  1:4466/1‑73 (MQ=39)
                                                                                            gAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGc                                                                                                                                   <  2:4466/73‑1 (MQ=39)
                                                                                              gCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGGCCGGTGc                                                    >  1:962297/1‑150 (MQ=255)
                                                                                               cAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCa                                                   <  2:311329/150‑1 (MQ=255)
                                                                                                 aCTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGccttgcccgcgaagccaacaccgtggtggatggcacgggcttcgcccgtgttcgcgg                                                                                              <  2:1657525‑M1/105‑58 (MQ=255)
                                                                                                 aCTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGccttgcccgcgaagccaacaccgtggtggatggcacgggcttcgcccgtgttcgcgg                                                                                              >  1:1657525‑M1/1‑48 (MQ=255)
                                                                                                  cTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGc                                                                                       <  2:1149113‑M2/111‑2 (MQ=255)
                                                                                                  cTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGc                                                                                       >  1:1149113‑M2/1‑110 (MQ=255)
                                                                                                   tGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGGCCGCGAACACGGGCGAAGCCCGTGCCATCTACCACGGGCGTGTCTTCGCGGGCAAGGCCGCTCCCCCACGGGTCGCGTCAGCCAGCCCGGTGCAgcgc                                               >  2:1882815/1‑150 (MQ=21)
                                                                                                   tGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAgcgc                                               >  2:2075331/1‑150 (MQ=255)
                                                                                                    gTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGcc                                              >  1:1631025/1‑150 (MQ=255)
                                                                                                      cTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAg                                            <  2:1094394/150‑1 (MQ=255)
                                                                                                         gCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCACCCCGGTGCAGCGCCAGGCa                                         <  1:1399027/150‑1 (MQ=255)
                                                                                                           tCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGgtgt                                                                                                         <  1:477949/84‑1 (MQ=255)
                                                                                                           tCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGgtgt                                                                                                         >  2:477949/1‑84 (MQ=255)
                                                                                                           tCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAgc                                                 >  1:2273020/1‑140 (MQ=255)
                                                                                                           tCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAgc                                                 <  2:2273020/140‑1 (MQ=255)
                                                                                                            cAATTTCTAAAAGCTGGCGCGCTCCCT‑GGGGGAGCGGGCTCGACCGCAAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGtt                                      <  1:519256/150‑1 (MQ=255)
                                                                                                            cAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGtt                                      <  2:382782/150‑1 (MQ=255)
                                                                                                               tttCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTcagcca                                                             >  2:897793/1‑124 (MQ=255)
                                                                                                               tttCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTcagcca                                                             <  1:897793/124‑1 (MQ=255)
                                                                                                                ttCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTc                                                                       >  2:772967/1‑113 (MQ=255)
                                                                                                                ttCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTc                                                                       <  1:772967/113‑1 (MQ=255)
                                                                                                                 tCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGTCAGTTGTCCa                                 <  2:532031/150‑1 (MQ=255)
                                                                                                                 tCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCa                                 <  2:1620026/150‑1 (MQ=255)
                                                                                                                 tCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCa                                 <  1:1417975/150‑1 (MQ=255)
                                                                                                                 tCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCa                                 <  1:1779702/150‑1 (MQ=255)
                                                                                                                   tAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGGCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGc                               >  1:740881/1‑150 (MQ=255)
                                                                                                                           GGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCGGTGCCATCCACCAGGGTGTTGTCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGtt                       <  1:1113876‑M1/150‑1 (MQ=255)
                                                                                                                           GGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGtt                       >  1:1645169‑M1/1‑150 (MQ=255)
                                                                                                                                    ccT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAAccc              >  1:747198/1‑150 (MQ=255)
                                                                                                                                    ccT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGACATCCAACACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGGCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCCGCATCCGGTTGCTGAAccc              >  2:422065/1‑150 (MQ=255)
                                                                                                                                     cT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAAcccc             >  1:1682701/1‑150 (MQ=255)
                                                                                                                                           ggAGCGGccttgcccgcgaagccaacaccgtggtggatggcacgggcttcgcccgtgttcgcgggcaagcccgctcccccagggatcgcgccagcttttagaaattgagcaagacagttgctcccaaaaaaagcaaacggcatccagtga        >  1:1824518‑M1/1‑7 (MQ=255)
                                                                                                                                             aGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGt      <  1:1775033/150‑1 (MQ=255)
                                                                                                                                              gCGGGCTTGCCCGCGAACACGGGCGAAGCCCTTGCAATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGtt     <  1:977179/150‑1 (MQ=255)
                                                                                                                                              gCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGtt     <  1:2075331/150‑1 (MQ=255)
                                                                                                                                              gCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGtt     <  2:747198/150‑1 (MQ=255)
                                                                                                                                              gCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGtt     <  2:1682701/150‑1 (MQ=255)
                                                                                                                                              gCGGGCTTGCCCGCGAACACGGGCGAAGCCAGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGtt     <  1:597211/150‑1 (MQ=255)
                                                                                                                                               cGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCCCCAGGCAGTTGTCCAGCAACCGGTTTCTGAACCCCCACTCGTTg    >  2:183191/1‑150 (MQ=255)
                                                                                                                                                gggCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGccgctcccccagggatcgcgccagcttttagaaattgagcaagacagttgctcccaaaaaaagcaaacggcatccagtgactaca   <  2:351104‑M2/150‑86 (MQ=255)
                                                                                                                                                 gccttgcccgcgaagccaacaccgtggtggatggcacgggcttcgcccgtgttcgcgggcaagcccgctcccccagggatcgcgccagcttttagaaattgagcaagacagttgctcccaaaaaaagcaaacggcatccagtgactacaa  >  2:1446565‑M1/1‑1 (MQ=255)
                                                                                                                                                 gccttgcccgcgaagccaacaccgtggtggatggcacgggcttcgcccgtgttcgcgggcaagcccgctcccccagggatcgcgccagcttttagaaattgagcaagacag                                         <  2:1149113‑M1/111‑111 (MQ=255)
                                                                                                                                                 gccttgcccgcgaagccaacaccgtggtggatggcacgggcttcgcccgtgttcgcgggcaagcccgctcccccagggatcgcgccagcttttagaaattgagcaagacag                                         >  1:1149113‑M1/1‑1 (MQ=255)
                                                                                                                                                 |                                                                                                                                                     
GATAATGCTTATCATCCGTGCGGCAGGTCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGTTGTC  >  NC_002947/1149788‑1150081

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.