New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 114993267 (0.760)8 (0.100) 6/230 NT 10.6% intergenic (‑173/+84) PP_1008/gapA RNA polymerase subunit sigma‑24/glyceraldehyde‑3‑phosphate dehydrogenase
?NC_002947 = 1149995 72 (0.870)intergenic (‑236/+21) PP_1008/gapA RNA polymerase subunit sigma‑24/glyceraldehyde‑3‑phosphate dehydrogenase

TTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGTTGTCATACCAGGCCAGCACCTTGAGCATCCGCCCGTTGGCCCGGGTATGGTTGG  >  NC_002947/1149847‑1150131
                                                                                                                                                    |                                                                                                                                        
ttGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGc                                                                                                                                         >  2:1446565‑M2/1‑149 (MQ=255)
gacaacgagtgggggttcagcaaccggatgctggacaactgcctggcgctgcaccgggctgGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGc                                                                                                                                         >  1:135328‑M1/62‑150 (MQ=255)
      tCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGccgctcc                                                                                                                                   >  1:1824518‑M2/1‑143 (MQ=255)
          tGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCcaca                                                                                                                               <  1:2049961/150‑1 (MQ=255)
             gtGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTTCTCAATTTCTGCGACCTGGCGCGATCCCTGGGGGAGCGGGGTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCGCGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACgg                                                                                                                            <  1:264647/149‑1 (MQ=21)
              gttcagcaaccggatgctggacaactgcctggcgctgcaccgggctgGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACggg                                                                                                                           <  1:1190760‑M1/103‑1 (MQ=255)
                 cGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTcg                                                                                                                        >  1:809105/1‑150 (MQ=255)
                  gTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTcgc                                                                                                                       <  1:1991063/150‑1 (MQ=255)
                    ttGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGt                                                                                                                     <  2:1007034/150‑1 (MQ=255)
                    ttGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGt                                                                                                                     <  1:1249938/150‑1 (MQ=255)
                    ttGCTTTTTTTGGGAGCAACTGTCTCGTGGCATGTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTcgcgg                                                                                                                     >  1:1642902/1‑149 (MQ=21)
                     tGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTc                                                                                                                    >  2:1779702/1‑150 (MQ=255)
                      gCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTca                                                                                                                   >  1:735638/1‑150 (MQ=255)
                      accggatgctggacaactgcctggcgctgcaccgggctgGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTca                                                                                                                   >  2:1190760‑M1/40‑150 (MQ=255)
                      accggatgctggacaactgcctggcgctgcaccgggctgGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTca                                                                                                                   >  2:1535524‑M1/40‑150 (MQ=255)
                        tttttttGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCca                                                                                                                                 <  2:2262272/134‑1 (MQ=255)
                        tttttttGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCca                                                                                                                                 >  1:2262272/1‑134 (MQ=255)
                        tttttttGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCAGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTcagc                                                                                                                 >  2:597211/1‑150 (MQ=255)
                          gatgctggacaactgcctggcgctgcaccgggctgGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTcagcca                                                                                                               >  2:1107008‑M1/36‑150 (MQ=255)
                                   gCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGGCCGGTGc                                                                                                      >  1:962297/1‑150 (MQ=255)
                                    cAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCa                                                                                                     <  2:311329/150‑1 (MQ=255)
                                       cTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGc                                                                                                                                         >  1:1149113‑M2/1‑110 (MQ=255)
                                       cTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGc                                                                                                                                         <  2:1149113‑M2/111‑2 (MQ=255)
                                        tGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGGCCGCGAACACGGGCGAAGCCCGTGCCATCTACCACGGGCGTGTCTTCGCGGGCAAGGCCGCTCCCCCACGGGTCGCGTCAGCCAGCCCGGTGCAgcgc                                                                                                 >  2:1882815/1‑150 (MQ=21)
                                        tGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAgcgc                                                                                                 >  2:2075331/1‑150 (MQ=255)
                                         gTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGcc                                                                                                >  1:1631025/1‑150 (MQ=255)
                                          tCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCca                                                                                                                                 >  1:376894/1‑116 (MQ=255)
                                          tCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCca                                                                                                                                 <  2:376894/116‑1 (MQ=255)
                                           cTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAg                                                                                              <  2:1094394/150‑1 (MQ=255)
                                              gCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCACCCCGGTGCAGCGCCAGGCa                                                                                           <  1:1399027/150‑1 (MQ=255)
                                                tCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAgc                                                                                                   <  2:2273020/140‑1 (MQ=255)
                                                tCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAgc                                                                                                   >  1:2273020/1‑140 (MQ=255)
                                                 cAATTTCTAAAAGCTGGCGCGCTCCCTGGGGGAGCGGGCTCGACCGCAAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGtt                                                                                        <  1:519256/150‑1 (MQ=255)
                                                 cAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGtt                                                                                        <  2:382782/150‑1 (MQ=255)
                                                    tttCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTcagcca                                                                                                               >  2:897793/1‑124 (MQ=255)
                                                    tttCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTcagcca                                                                                                               <  1:897793/124‑1 (MQ=255)
                                                     ttCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTc                                                                                                                         >  2:772967/1‑113 (MQ=255)
                                                     ttCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTc                                                                                                                         <  1:772967/113‑1 (MQ=255)
                                                      tCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGTCAGTTGTCCa                                                                                   <  2:532031/150‑1 (MQ=255)
                                                      tCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCa                                                                                   <  2:125910/150‑1 (MQ=255)
                                                      tCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCa                                                                                   <  1:1417975/150‑1 (MQ=255)
                                                      tCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCa                                                                                   <  2:1620026/150‑1 (MQ=255)
                                                      tCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCa                                                                                   <  1:1779702/150‑1 (MQ=255)
                                                        tAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGGCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGc                                                                                 >  1:740881/1‑150 (MQ=255)
                                                                GGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCGGTGCCATCCACCAGGGTGTTGTCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGtt                                                                         <  1:1113876‑M1/150‑1 (MQ=255)
                                                                GGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGtt                                                                         >  1:1645169‑M1/1‑150 (MQ=255)
                                                                         ccTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAAccc                                                                >  1:747198/1‑150 (MQ=255)
                                                                         ccTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGACATCCAACACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGGCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCCGCATCCGGTTGCTGAAccc                                                                >  2:422065/1‑150 (MQ=255)
                                                                          cTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAAcccc                                                               >  1:1682701/1‑150 (MQ=255)
                                                                                 aGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGt                                                        <  1:1775033/150‑1 (MQ=255)
                                                                                  gCGGGCTTGCCCGCGAACACGGGCGAAGCCCTTGCAATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGtt                                                       <  1:977179/150‑1 (MQ=255)
                                                                                  gCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGtt                                                       <  2:1682701/150‑1 (MQ=255)
                                                                                  gCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGtt                                                       <  1:2075331/150‑1 (MQ=255)
                                                                                  gCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGtt                                                       <  2:747198/150‑1 (MQ=255)
                                                                                  gCGGGCTTGCCCGCGAACACGGGCGAAGCCAGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGtt                                                       <  1:597211/150‑1 (MQ=255)
                                                                                   cGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCCCCAGGCAGTTGTCCAGCAACCGGTTTCTGAACCCCCACTCGTTg                                                      >  2:183191/1‑150 (MQ=255)
                                                                                    gggCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGccgctcccccagggatcgcgccagcttttagaaattgagcaagacagttgctcccaaaaaaagcaaacggcatccagtgactaca                                                     <  2:351104‑M2/150‑86 (MQ=255)
                                                                                      gCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGccgctcccacacgggtcgcgccagcttttagaaattgagcaagacagttgctcccaaaaaaagcaaacggcatccagtgactacaat                                                   <  1:2323386‑M2/150‑88 (MQ=255)
                                                                                      gCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTg                                                                                                       <  1:518897/98‑1 (MQ=255)
                                                                                      gCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTg                                                                                                       >  2:518897/1‑98 (MQ=255)
                                                                                        ttGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGTTGTCATa                                                 >  2:1441326/1‑150 (MQ=255)
                                                                                            ccGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGccgctcccccagggatcgcgccagcttttagaaattgagcaagacagttgctcccaaaaaaagcaaacggcatccagtgactacaatctttac                                             >  1:351104‑M2/1‑57 (MQ=255)
                                                                                            ccGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGccgctcccccagggatcgcgccagcttttagaaattgagcaagacagt                                                                                          >  1:1657525‑M2/1‑57 (MQ=255)
                                                                                            ccGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGccgctcccccagggatcgcgccagcttttagaaattgagcaagacagt                                                                                          <  2:1657525‑M2/105‑49 (MQ=255)
                                                                                            ccGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAAcc                                                                 <  2:2399038/130‑1 (MQ=255)
                                                                                            ccGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAAcc                                                                 >  1:2399038/1‑130 (MQ=255)
                                                                                            ccGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGTTGTCATACCAg                                             <  1:183191/150‑1 (MQ=255)
                                                                                            ccGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTGCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGTTGTCATACCAg                                             >  2:2269143/1‑150 (MQ=255)
                                                                                             cgcgAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCa                                                                                   <  1:281839/111‑1 (MQ=255)
                                                                                             cgcgAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCa                                                                                   >  2:281839/1‑111 (MQ=255)
                                                                                             cgcgAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGCccgctcccccagggatcgcgccagcttttagaaattgagcaagacagttgctcccaaaaaaagcaaacggcatccagtgactacaatctttacc                                            <  2:1993211‑M2/150‑95 (MQ=255)
                                                                                              gcgAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGTTGTCATACCAGGc                                           <  2:735638/150‑1 (MQ=255)
                                                                                              gcgAACACGGCCGAAGCCCGTGCCATCCACCACGGTTTTGGCTCCGCCGGCATGTTTGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGTTGTCATACCAGGc                                           <  2:1642902/150‑1 (MQ=38)
                                                                                                      gggCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGTTGTCATACCAGGCCAGCACCt                                   >  1:673741/1‑150 (MQ=255)
                                                                                                      gggCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGTTGTCATACCAGGCCAGCACCt                                   >  2:409800/1‑150 (MQ=255)
                                                                                                       ggCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGTTGTCATACCAGGc                                           >  2:120355/1‑141 (MQ=255)
                                                                                                       ggCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGTTGTCATACCAGGc                                           <  1:120355/141‑1 (MQ=255)
                                                                                                       ggCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGTTGTCATACCAGGCCAGCACCtt                                  <  2:673741/150‑1 (MQ=255)
                                                                                                         cGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGTTGTCATACCAGGCCAGCACCtgtc                                <  1:83977/150‑4 (MQ=255)
                                                                                                             gCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGTTGTCATACCAGGCCAGCACCTTGAGCAt                            >  1:2379847/1‑150 (MQ=255)
                                                                                                             gCCCGTGCCATCCACCACGGTGTTGGATTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCATGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGTTGTCATACCAGGCCAGCACCTTGAGCAt                            <  2:1179952/150‑1 (MQ=255)
                                                                                                               ccGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGTTGTCATACCAGGCCAGCACCTTGAGCATcc                          >  1:81649/1‑150 (MQ=255)
                                                                                                                   gCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGccgctcccacacgggtcgcgccagcttttagaaattgagcaagacagttgctcccaaaaaaagcaaacggcatccagtgactacaatctttaccttttcctgataattccacactt                      >  2:2323386‑M2/1‑34 (MQ=255)
                                                                                                                      aTCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGGTGAACCCCCACTCGTTGTCATACCAGGCCAGCACCTTGAGCATCCGCCCGtt                   >  1:531058/1‑150 (MQ=255)
                                                                                                                        ccaccaCGGTGTTGGCTTCGCGGGCAAGCccgctcccccagggatcgcgccagcttttagaaattgagcaagacagttgctcccaaaaaaagcaaacggcatccagtgactacaatctttaccttttcctgataattccacacttgacct                 >  1:1993211‑M2/1‑29 (MQ=255)
                                                                                                                          accacGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGTTGTCATACCAGGCCAGCACCTTGAGCATCCGCCCGTTGGcc               >  2:203935/1‑150 (MQ=255)
                                                                                                                           gcacGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGTTGTCATACCAGGCCAGCACCTTGAGCATCCGCCCGTTGGccc              <  1:901880/149‑1 (MQ=255)
                                                                                                                            cacGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGTTGTCATACCAGGCCAGCACCTTGAGCATCCGCCCGTTGGCCCg             >  2:1377657/1‑150 (MQ=255)
                                                                                                                              cGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGTTGTCATACCAGGCCAGCACCTTGAGCATCCGCCCGTTGGCCCgg            <  2:846813/149‑1 (MQ=255)
                                                                                                                              cGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGTTGTCATACCAGGCCAGCACCTTGAGCATCCGCCCGTTGGCCCgg            >  1:846813/1‑149 (MQ=255)
                                                                                                                                  gtTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGTTGTCATACCAGGCCAGCACCTTGAGCATCCGCCCGTTGGCCCGGGtgtc       <  1:2269143/150‑4 (MQ=255)
                                                                                                                                     ggCTTCGCGGGCAAGGCCGCTCCGACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGTTGTCATACCAGGCCAGCACCTTGAGCATCCGCCCGTTGGCCCGGGTATGGtt    <  2:962297/150‑1 (MQ=255)
                                                                                                                                     ggCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAAc                                                                  >  2:559410/1‑88 (MQ=255)
                                                                                                                                     ggCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAAc                                                                  <  1:559410/88‑1 (MQ=255)
                                                                                                                                      gCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCCCTCGTTGTCATACCAGGCCAGCACCTTGAGCATCCGCCCGTTGGCCCGGGTATGGTTg   <  2:81649/150‑1 (MQ=255)
                                                                                                                                       cTTCGCGGGCAAAGACGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGTTGTCATACCAGGCCGGCACCTTGAGCATCCGCCCGTTGGCCCGGGTATGGTTgg  <  2:1113876/150‑1 (MQ=255)
                                                                                                                                                 aaGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTg                                                                                                       >  1:16694/1‑39 (MQ=255)
                                                                                                                                                 aaGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTg                                                                                                       <  2:16694/39‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                        
TTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGTTGTCATACCAGGCCAGCACCTTGAGCATCCGCCCGTTGGCCCGGGTATGGTTGG  >  NC_002947/1149847‑1150131

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.