New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 1195878129 (1.460)7 (0.080) 6/234 NT 5.3% coding (362/426 nt) xcpP type II secretion pathway protein XcpP
?NC_002947 = 1195894 128 (1.520)coding (378/426 nt) xcpP type II secretion pathway protein XcpP

Only 100 of 156 total aligned reads displayed.

GGCCTCAAGGCCCAGCCATTGGCCGCCAGTGTGGTGGTGCTGCGCTACGGCGAGCAAGTGCGCACCCTGGCCCGCGGTCAGCGCCTGGCGCCAGGGATCGTGCTGCAGGACATCGACAGCGATGGCCTGATTTTCAACAACCAGGGGCGGCGTGAGCGCCTGC‑CCTGGCCGCCACGCCCCGCCGTGACCGGCTTCAAGCGGCAAGGATGAACGATGCCTGTTAGATACTGCATGGCGGCTGCGCTGAGCCTGGCCTTGTCCATGGCCTATGCCCAAGAGCCGGTGTTCGATGAC  >  NC_002947/1195733‑1196026
                                                                                                                                                 |                                                                                                                                                     
ggcCTCAAGGCCCAGCCATTGGCCGCCAGTGTGGTGGTGCTGCGCTACGGCGAGCAAGTGCGCACCCTGGCCCGCGGTCAGCGCCTGGCGCCAGGGATCGTGCTGCAGGACATCGACAGCGATGGCCTGATTTTCAACAACCAGGggcgg                                                                                                                                                   >  1:1972110/1‑150 (MQ=255)
  ccTCAAGGCCCAGCCATTGGCCGCCAGTGTGGTGGTGCTGCGCTACGGCGAGCAAGTGCGCACCCTGGCCCGCGGTCAGCGCCTGGCGCCAGGGATCGTGCTGCAGGACATCGACAGCGATGGCCTGATTTTCAACAACCAGGGgcggcg                                                                                                                                                 >  2:804794/1‑150 (MQ=255)
   cTCAAGGCCCAGCCATTGGCCGCCAGTGTGGTGGTGCTGCGCTACGGCGAGCAAGTGCGCACCCTGGCCCGCGGTCAGCGCCTGGCGCCAGGGATCGTGCTGCAGGACATCGACAGCGATGGCCTGATTTTCAACAACCAGGGGCGGCGt                                                                                                                                                >  2:653220/1‑150 (MQ=255)
   cTCAAGGCCCAGCCATTGGCCGCCAGTGTGGTGGTGCTGCGCTACGGCGAGCAAGTGCGCACCCTGGCCCGCGGTCAGCGCCTGGCGCCAGGGATCGTGCTGCAGGACATCGACAGCGATGGCCTGATTTTCAACAACCAGGGGCGGCGt                                                                                                                                                >  2:2177252/1‑150 (MQ=255)
   cTCAAGGCCCAGCCATTGGCCGCCAGTGTGGTGGTGCTGCGCTACGGCGAGCAAGTGCGCACCCTGGCCCGCGGTCAGCGCCTGGCGCCAGGGATCGTGCTGCAGGACATCGACAGCGATGGCCTGATTTTCAACAACCAGGGGCGGCGt                                                                                                                                                <  1:75120/150‑1 (MQ=255)
     cAAGGCCCAGCCATTGGCCGCCAGTGTGGTGGTGCTGCGCTACGGCGAGCAAGTGCGCACCCTGGCCCGCGGTCAGCGCCTGGCGCCAGGGATCGTGCTGCAGGACATCGACAGCGATGGCCTGATTTTCAACAACCAGGGGCGGCGTGa                                                                                                                                              <  1:2177252/150‑1 (MQ=255)
         gCCCAGCCATTGGCCGCCAGTGTGGTGGTGCTGCGCTACGGCGAGCAAGTGCGCACCCTGGCCCGCGGTCAGCGCCTGGCGCCAGGGATCGTGCTGCAGGACATCGACAGCGATGGCCTGATTTTCAACAACCAGGGGCGGCGTgcctgg                                                                                                                                          <  2:2236156/150‑6 (MQ=255)
             aGCCATTGGCCGCCAGTGTGGTGGTGCTGCGCTACGGCGAGCAAGTGCGCACCCTGGCCCGCGGTCAGCGCCTGGCGCCAGGGATCGTGCTGCAGGACATCGACAGCGATGGCCTGATTTTCAACAACCAGGGGCGGCGTGAGCGCCTGc                                                                                                                                      <  2:1789272‑M2/150‑2 (MQ=255)
                cATTGGCCGCCAGTGTGGTGGTGCTGCGCTACGGCGAGCAAGTGCGCACCCTGGCCCGCGGTCAGCGCCTGGCGCCAGGGATCGTGCTGCAGGACATCGACAGCGATGGCCTGATTTTCAACAACCAGGGGCGGCGTGAGCGCCTGccct                                                                                                                                   >  2:1723721‑M2/1‑146 (MQ=255)
                  ttGGCCGCCAGTGTGGTGGTGCTGCGCTACGGCGAGCAAGTGCGCACCCTGGCCCGCGGTCAGCGCCTGGCGCCAGGGATCGTGCTGCAGGACATCGACAGCGATGGCCTGATTTTCAACAACCAGGGcaggcgctcacgccgcccctgg                                                                                                                                 <  1:1610969‑M1/150‑23 (MQ=255)
                      ccgccAGTGTGGTGGTGCTGCGCTACGGCGAGCAAGTGCGCACCCTGGCCCGCGGTCAGCGCCTGGCGCCAGGGATCGTGCTGCAGGACATCGACAGCGATGGCCTGATTTTCAACAGCCAGGTGCGGCGTGAGCGCCTGC‑CCTGgccgc                                                                                                                            <  1:2370297/150‑1 (MQ=255)
                       cgccAGTGTGGTGGTGCTGCGCTACGGCGAGCAAGTGCGCACCCTGGCCCGCGGTCAGCGCCTGGCGCCAGGGATCGTGCTGCAGGACATCGACAGCGATGGCCTGATTTTCAACAACCAGGGcaggcgctcacgccgcccctggttgtt                                                                                                                            <  1:1754124‑M1/150‑28 (MQ=255)
                                 gtggtgCTGCGCTACGGCGAGCAAGTGCGCACCCTGGCCCGCGGTCAGCGCCTGGCGCCAGGGATCGTGCTGCAGGACATCGACAGCGATGGCCTGATTTTCAACAACCAGGGGCGGCGTGAGCGCCTGC‑CCTGGCCGCCAc                                                                                                                         >  2:582047/1‑142 (MQ=255)
                                      gctgcGCTACGGCGAGCAAGTGCGCACCCTGGCCCGCGGTCAGCGCCTGGCGCCAGGGATCGTGCTGCAGGACATCGACAGCGATGGCCTGATTTTCAACAACCAGGGGCGGCGTGAGCGCCTGC‑CCTGGCCGCCACGCCCCGCCGTGAc                                                                                                            <  2:862707/150‑1 (MQ=255)
                                        tgcGCTACGGCGAGCAAGTGCGCACCCTGGCCCGCGGTCAGCGCCTGGCGCCAGGGATCGTGCTGCAGGACATCGACAGCGATGGCCTGATTTTCAACAACCAGGGGCGGCGTGAGCGCCTGC‑CCTGGCCGCCACGCCCCGCCGTGACCg                                                                                                          >  2:1286572/1‑150 (MQ=255)
                                          cgcTACGGCGAGCAAGTGCGCACCCTGGCCCGCGGTCAGCGCCTGGCGCCAGGGATCGTGCTGCAGGACATCGACAGCGATGGCCTGATTTTCAACAACCAGGGGCGGCGTGAGCGCCTGC‑CCTGGCCGCCACGCCCCGCCGTGACCGGc                                                                                                        >  1:118152/1‑150 (MQ=255)
                                          cgcTACGGCGAGCAAGTGCGCACCCTGGCCCGCGGTCAGCGCCTGGCGCCAGGGATCGTGCTGCAGGACATCGACAGCGATGGCCTGATTTTCAACAACCAGGGGCGGCGTGAGCGCCTGC‑CCTGGCCGCCACGCCCCGCCGTGACCGGc                                                                                                        <  2:118152/150‑1 (MQ=255)
                                             tACGGCGAGCAAGTGCGCACCCTGGCCCGCGGTCAGCGCCTGGCGCCAGGGATCGTGCTGCAGGACATCGACAGCGATGGCCTGATTTTCAACAACCAGGGGCGGCGTGAGCGCCTGC‑CCTGGCCGCCACGc                                                                                                                       >  2:1896720/1‑132 (MQ=255)
                                             tACGGCGAGCAAGTGCGCACCCTGGCCCGCGGTCAGCGCCTGGCGCCAGGGATCGTGCTGCAGGACATCGACAGCGATGGCCTGATTTTCAACAACCAGGGGCGGCGTGAGCGCCTGC‑CCTGGCCGCCACGc                                                                                                                       <  1:1896720/132‑1 (MQ=255)
                                               cGGCGAGCAAGTGCGCACCCTGGCCCGCGGTCAGCGCCTGGCGCCAGGGACCGTGCTGCAGGACATCGACAGCGATGGCCTGATTTTCAACAACCAGGGGCGGCGTGAGCGCCTGC‑CCTGGCCGCCACGCCCCGCCGTGACCGGCTTCaa                                                                                                   <  2:1593732/150‑1 (MQ=255)
                                                  cGAGCAAGTGCGCACCCTGGCCCGCGGTAAGCGCCTGGCGCCAGGGATCGTGCTGCAGGACATCGACAGCGATGGCCTGATTTTCAACAACCAGGGGCGGCGTGAGCGCCTGC‑CCTGGCCGCCACGCCCCGCCGTGACCGGCTTCAAGCg                                                                                                >  1:2244765/1‑150 (MQ=255)
                                                   gAGCAAGTGCGCACCCTGGCCCGCGGTCAGCGCCTGGCGCCAGGGATCGTGCTGCAGGACATCGACAGCGATGGCCTGATTTTCAACAACCAGGGGCGGCGTGAGCGCCt                                                                                                                                        >  2:228889/1‑110 (MQ=255)
                                                   gAGCAAGTGCGCACCCTGGCCCGCGGTCAGCGCCTGGCGCCAGGGATCGTGCTGCAGGACATCGACAGCGATGGCCTGATTTTCAACAACCAGGGGCGGCGTGAGCGCCt                                                                                                                                        <  1:228889/110‑1 (MQ=255)
                                                   gAGCAAGTGCGCACCCTGGCCCGCGGTCAGCGCCTGGCGCCAGGGATCGTGCTGCAGGACATCGACAGCGATGGCCTGATTTTCAACAACCAGGGGCGGCGTGAGCGCCTGC‑CCTGGCCGCCACGCCCCGCCGTGACCGGCTTCAAGCgg                                                                                               >  2:1633418/1‑150 (MQ=255)
                                                     gCAAGTGCGCACCCTGGCCCGCGGTCAGCGCCTGGCGCCAGGGATCGTGCTGCAGGACATCGACAGCGATGGCCTGATTTTCAACAACCAGGGGCGGCGTGAGCGCCTGC‑CCTGGCCGCCACGCCCCGCCGTGACCGGCTTCAAGCGGCa                                                                                             >  1:1817646/1‑150 (MQ=255)
                                                             gcACCCTGGCCCGCGGTCAGCGCCTGGCGCCAGGGATCGTGCTGCCGGGCATTGACAGCGATGGCCTGATTTTCAACAACCAGGGGCGGCGTGAGCGCCTGC‑CCTGGCCGCCACGCCCCGCCGTGACCGGCTTCAAGCGGCAAGGATGaa                                                                                     <  2:2244765/150‑1 (MQ=255)
                                                             gcACCCTGGCCCGCGGTCAGCGCCTGGCGCCAGGGATCGTGCTGCAGGACATCGACAGCGATGGCCTGATTTTCAACAACCAGGGGCGGCGTGAGCGCCTGC‑CCTGGCCGCCACGCCCCGCCGTGACCGGCTTCAAGCGGCAAGGATGaa                                                                                     >  1:221591/1‑150 (MQ=255)
                                                             gcACCCTGGCCCGCGGTCAGCGCCTGGCGCCAGGGATCGTGCTGCAGGACATCGACAGCGATGGCCTGATTTTCAACAACCAGGGGCGGCGTGAGCGCCTGC‑CCTGGCCGCCACGCCCCGCCGTGACCGGCTTCAAGCGGCAAGGATGaa                                                                                     >  2:169771/1‑150 (MQ=255)
                                                                 ccTGGCCCGCGGTCAGCGCCTGGCGCCAGGGATCGTGCTGAAGGACATCGAAAGCGATGGCCTGATTTTCACCTAAACGGGGCGGCGTGAGCACCTACGCATTGCTG‑CACCCCGCGCCGTGACCGGCTTCAAGCGGCAAGGATGAACGAt                                                                                 <  1:656765/150‑1 (MQ=255)
                                                                   tGGCCCGCGGTCAGCGCCTGGCGCCAGGGATCGTGCTGCAGGACATCGACAGCGATGGCCTGATTTTCAACAACCAGGGGCGGCGTGAGCGCCTGC‑CCTGGCCGCCACGCCCCGCCGTGACCGGCTTCAAGCGGCAAGGATGAACGATGc                                                                               <  1:1536431/150‑1 (MQ=255)
                                                                   tGGCCCGCGGTCAGCGCCTGGCGCCAGGGATCGTGCTGCAGGACATCGACAGCGATGGCCTGATTTTCAACAACCAGGGGCGGCGTGAGCGCCTGC‑CCTGGCCGCCACGCCCCGCCGTGACCGGCTTCAAGCGGCAAGGATGAACGATGc                                                                               <  1:1345030/150‑1 (MQ=255)
                                                                   tGGCCCGCGGTCAGCGCCTGGCGCCAGGGATCGTGCTGCAGGACATCGACAGCGATGGCCTGATTTTCAACAACCAGGGGCGGCGTGAGCGCCTGC‑CCTGGCCGCCACGCCCCGCCGTGACCGGCTTCAAGCGGCAAGGATGAACGATGc                                                                               <  1:1286572/150‑1 (MQ=255)
                                                                    ggCCCGCGGTCAGCGCCTGGCGCCAGGGATCGTGCTGCAGGACATCGACAGCGATGGCCTGATTTTCAACAACCAGGGGCGGCGTGAGCGCCTGC‑CCTGGCCGCCACGCCCCGCCGTGACCGGCTTCAAGCGGCAAGGATGAACGATGcc                                                                              <  2:609339/150‑1 (MQ=255)
                                                                     gCCCGCGGTCAGCGCCTGGCGCCAGGGATCGTGCTGCAGGACATCGACAGCGATGGCCTGATTTTCAACAACCAGGGGCGGCGTGAGCGCCTGA‑CGTCACGCTGGCTGGCCTCTGGGACCGGCTTCAAGCGGCAAGGATGAACGATGCCt                                                                             <  1:420908/150‑1 (MQ=255)
                                                                       ccGCGGTCAGCGCCTGGCGCCAGGGATCGTGCTGCAGGACATCGACAGCGATGGCCTGATTTTCAACAACCAGGGGCGGCGTGAGCGCCTGC‑CCTGGCCGCCACGCCCCGCCGTGACCGGCTTCAAGCGGCAAGGATGAACGATGCCTGt                                                                           >  2:1416959/1‑150 (MQ=255)
                                                                       ccGCGGTCAGCGCCTGGCGCCAAGGATCGTTCTGCAGGACATCGACAGCGATGGCCTGATTTTCCACAACCAGGGGCGGCGTGACCGCCTGC‑CCTGGCCGCCACGCCCCGCAGTGACCGGCTTCACGCGGCAAAGATGAACGAGGCCTGt                                                                           >  1:451541/1‑150 (MQ=255)
                                                                        cgcgGTCAGCGCCTGGCGCCAGGGATCGTGCTGCAGGACATCGACAGCGATGGCCTGATTTTCAACAACCAGGGGCGGCGTGAGCGCCTGC‑CCTGGCCGCCACGCCCCGCCGTGACCGGCTTCAAGCGGCAAGGATGAACGATGCCTGtt                                                                          >  2:1054026/1‑150 (MQ=255)
                                                                        cgcgGTCAGCGCCTGGCGCCAGGGATCGTGCTGCAGGACATCGACAGCGATGGCCTGATTTTCAACAACCAGGGGCGGCGTGAGCGCCTGC‑CCTGGCCGCCACGCCCCGCCGTGACCGGCTTCAAGCGGCAAGGATGAACGATGCCTGtt                                                                          <  2:221591/150‑1 (MQ=255)
                                                                             tCAGCGCCTGGCGCCAGGGATCGTGCTGCAGGACATCGACAGCGATGGCCTGATTTTCAACAACCAGGGGCGGCGTGAGCGCCTGC‑CCTGGCCGCCACGCCCCGCCGTGACCGGCTTCAAGCGGCAAGGAt                                                                                        <  1:2024538/131‑1 (MQ=255)
                                                                             tCAGCGCCTGGCGCCAGGGATCGTGCTGCAGGACATCGACAGCGATGGCCTGATTTTCAACAACCAGGGGCGGCGTGAGCGCCTGC‑CCTGGCCGCCACGCCCCGCCGTGACCGGCTTCAAGCGGCAAGGAt                                                                                        >  2:2024538/1‑131 (MQ=255)
                                                                                    cTGGCGCCAGGGATCGTGCTGCAGGACATCGACAGCGATGGCCTGATTTTCAACAACCAGGGGCGGCGTGAGCGCCTGC‑CCTGGCCGCCACGCCCCGCCGTGACCGGCTTCAAGCGGCAAGGATGAACGATGCCTGTTAGATACTGCATg                                                              >  1:424465/1‑150 (MQ=255)
                                                                                    cTGGCGCCAGGGATCGTGCTGCAGGACATCGACAGCGATGGCCTGATTTTCAACAACCAGGGGCGGCGTGAGCGCCTGC‑CCTGGCCGCCACGCCCCGCCGTGACCGGCTTCAAGCGGCAAGGATGAACGATGCCTGTTAGATACTGCATg                                                              >  1:2388906/1‑150 (MQ=255)
                                                                                      ggCGCCAGGGATCGTGCTGCAGGACATCGACAGCGATGGCCTGATTTTCAACAACCAGGGcaggcgctcacgccgcccctggttgtt                                                                                                                            >  2:431833‑M1/1‑60 (MQ=255)
                                                                                      ggCGCCAGGGATCGTGCTGCAGGACATCGACAGCGATGGCCTGATTTTCAACAACCAGGGGCGGCGTGAGCGCCTGC‑CCTGGCCGCCACGCCCCGCCGTGACCGGCTTCAAGCGGCAAGGATGAACGATGCCTGTTAGATACTGCATggc                                                            <  2:1817646/150‑1 (MQ=255)
                                                                                         ggcAGCGATCGCGCTGCAGGAGATCGACGGCGAGTGCCTGATTTTCGACATCCAGGGGCGGCGTGAGCGTCTGC‑CCTGGCCGGAACGCTCAGCCGTGACCTGCTTCAAGCGGCAAGGATGAACGATGCCGGTTAGATACTGCATggcggc                                                         <  2:424465/148‑1 (MQ=255)
                                                                                         gcCAGGGATCGTGCTGCAGGACATCGACAGCGATGGCCTGATTTTCAACAACCAGGGGCGGCGTGAGCGCCTGC‑CCTGGCCGCCACGCCCCGCCGTGACCGACTTCAAGCGGCAAGGATGAACGATGCCTGTTAGATACTGCATggcggc                                                         >  1:984730/1‑150 (MQ=255)
                                                                                            aGGGATCGTGCTGCAGGACATCGACAGCGATGGCCTGATTTTCAACAACCAGGGGCGGCGTGAGCGCCTGC‑CCTGGCCGCCACGCCCCGCCGTGACCGGCTTCAAGCGGCAAGGATGAACGATGCCTGTTAGATACTGCATGGCGGCTgc                                                      >  2:1454323/1‑150 (MQ=255)
                                                                                              ggATCGTGCTGCAGGACATCGACAGCGATGGCCTGATTTTCAACAACCAGGGGCGGCGTGAGCGCCTGC‑CCTGGCCGCCACGCCCCGCCGTGACCGGCTTCAAGCGGCAAGGATGAACGATGCCTGTTAGATACTGCATGGCGGCTgcgc                                                    <  1:1054026/150‑1 (MQ=255)
                                                                                                   gTGCTGCAGGACATCGACAGCGATGGCCTGATTTTCAACAACCAGGGGCGGCGTGAGCGCCTGC‑CCTGGCCGCCACGCCCCGCCGTGACCGGCTTCAAGCGGCAAGGATGAACGATGCCTGTTAGATACTGCATGGCGGCTGCGCTGAGc                                               <  2:1949892/150‑1 (MQ=255)
                                                                                                    tgctgcAGGACATCGACAGCGATGGCCTGATTTTCAACAACCAGGGGCGGCGTGAGCGCCTGC‑CCTGGCCGCCACGCCCCGCCGTGACCGGCTTCAAGCGGCAAGGATGAACGATGCCTGTTAGATACTGCATGGCGGCTGCGATGAGcc                                              >  2:348592/1‑150 (MQ=255)
                                                                                                       tgcAGGACATCGACAGCGATGGCCTGATTTTCAACAACCAGGGGCGGCGTGAGCGCCTGC‑CCTGGCCGCCACGCCCCGCCGTGACCGGCTTCAAGCGGCAAGGATGAACGATGCCTGTTa                                                                         >  1:1204314/1‑120 (MQ=255)
                                                                                                        gcAGGACATCGACAGCGATGGCCTGATTTTCAACAACCAGGGGCGGCGTGAGCGCCTGC‑CCTGGCCGCCACGCCCCGCCGTGACCGGCTTCAAGCGGCAAGGATGAACGATGCCTGTTAGATACTGCATGGCGGCTGCGCTGAGCCTGGc                                          <  2:2388906/150‑1 (MQ=255)
                                                                                                         cAGGACATCGACAGCGATGGCCTGATTTTCAACAACCAGGGGCGGCGTGAGCGCCTGC‑CCTGGCCGCCACGCCCCGCCGTGACCGGCTTCAAGCg                                                                                                <  2:1247620/95‑1 (MQ=255)
                                                                                                         cAGGACATCGACAGCGATGGCCTGATTTTCAACAACCAGGGGCGGCGTGAGCGCCTGC‑CCTGGCCGCCACGCCCCGCCGTGACCGGCTTCAAGCg                                                                                                >  1:1247620/1‑95 (MQ=255)
                                                                                                         cAGGACATCGACAGCGATGGCCTGATTTTCAACAACCAGGGGCGGCGTGAGCGCCTGC‑CCTGGCCGCCACGCCCCGCCGTGACCGGCTTCAAGCGGCAAGGATGAAc                                                                                    <  2:2097780/107‑1 (MQ=255)
                                                                                                           ggACATCGACAGCGATGGCCTGATTTTCAACAGCCAGGGGCGGCGTGAGCGCCTGC‑CCTGGCCGCCACGCCCCGCCGTGACCGGCTTCAAGCGGCAAGGATGAACGATGCCTGTTAGATACTGCATGGCGGCTGCGCTGAGCCTGGCCtt                                       >  1:962936/1‑150 (MQ=255)
                                                                                                           ggACATCGACAGCGATGGCCTGATTTTCAACAACCAGGGGCGGCGTGAGCGCCTGC‑CCTGGCCGCCACGCCCCGCCGTGACCGGCTTCAAGCGGCAAGGATg                                                                                       >  2:1990055/1‑102 (MQ=255)
                                                                                                           ggACATCGACAGCGATGGCCTGATTTTCAACAACCAGGGGCGGCGTGAGCGCCTGC‑CCTGGCCGCCACGCCCCGCCGTGACCGGCTTCAAGCGGCAAGGATg                                                                                       <  1:1990055/102‑1 (MQ=255)
                                                                                                           ggACATCGACAGCGATGGCCTGATTTTCAACAACCAGGGGCGGCGTGAGCGCCTGC‑CCTGGCCGCCACGCCCCGCCGTGACCGGCTTCAAGCGGCAAGGATGAACGATGCCTGTTAGATACTGCATGGCGGCTGCGCTGAGCCTGGCCtt                                       >  2:256986/1‑150 (MQ=255)
                                                                                                           ggACATCGACAGCGATGGCCTGATTTTCAACAACCAGGGGCGGCGTGAGCGCCTGC‑CCTGGCCGCCACGCCCCGCCGTGACCGGCTTCAAGCGGCAAGGATGAACGATGCCTGTTAGATACTGCATGGCGGCTGCGCTGAGCCTGGCCtt                                       <  1:278514/150‑1 (MQ=255)
                                                                                                           ggACATCGACAGCGATGGCCTGATTTTCAACAACCAGGGGCGGCGTGAGCGCCTGC‑CCTGGCCGCCACGCCCCGCCGTGACCGGCTTCAAGCGGCAAGGATGAACGATGCCTGTTAGATACTGCATGGCGGCTGCGCTGAGCCTGGCCtt                                       >  2:2360038/1‑150 (MQ=255)
                                                                                                           ggACATCGACAGCGATGGCCTGATTTTCAACAACCAGGGGCGGCGTGAGCGCCTGC‑CCTGGCCGCAACGCCCCGCCGTGACCGGCTTCAAGCGGCAAGGATGAACGATGCCTGTTAGATACTGCATGGCGGCTGCGCTGAGCCTGGCCtt                                       >  1:2165362/1‑150 (MQ=255)
                                                                                                              cATCGACAGCGATGGCCTGATTTTCAACAACCAGGGGCGGCGTGAGCGCCTGC‑CCTGGCCGCCACGCCCCGCCGTGACCGGCTTCAAGCGGCAAGGATGAACGATGCCTGTTAGATACTGCATGGCGGCTGCGCTGAGCCTGGCCTTGTc                                    <  2:2306337/150‑1 (MQ=255)
                                                                                                                   aCAGCGATGGCCTGATTTTCAACAACCAGGGGCGGCGTGAGCGCCTGC‑CCTGGCCGCCACGCCCCGCCGTGACCGGCTTCAAGCgg                                                                                               >  1:635185/1‑86 (MQ=255)
                                                                                                                   aCAGCGATGGCCTGATTTTCAACAACCAGGGGCGGCGTGAGCGCCTGC‑CCTGGCCGCCACGCCCCGCCGTGACCGGCTTCAAGCGGCAAGGATGAACGATGCCTGTTAGATACTg                                                                  >  2:645947/1‑115 (MQ=255)
                                                                                                                   aCAGCGATGGCCTGATTTTCAACAACCAGGGGCGGCGTGAGCGCCTGC‑CCTGGCCGCCACGCCCCGCCGTGACCGGCTTCAAGCGGCAAGGATGAACGATGCCTGTTAGATACTGCATGGCGGCTGCGCTGAGCCTGGCCTTGTCCATgg                               <  2:464481/150‑1 (MQ=255)
                                                                                                                   aCAGCGATGGCCTGATTTTCAACAACCAGGGGCGGCGTGAGCGCCTGC‑CCTGGCCGCCACGCCCCGCCGTGACCGGCTTCAAGCGGCAAGGATGAACGATGCCTGTTAGATACTGCATGGCGGCTGCGCTGAGCCTGGCCTTGTCCATgg                               <  2:1510236/150‑1 (MQ=255)
                                                                                                                     aGCGATGGCCTGATTTTCAACAACCAGGGGCGGCGTGAGCGCCTGC‑CCTGGCCGCCACGCCCCGCCGTGACCGGCTTCAAGCGGCAAGGATGAACGATGCCTGTTAGATACTGCATGGCGGCTGCGCTGAGCCTGGCCTTGTCCATGGcc                             >  1:302566/1‑150 (MQ=255)
                                                                                                                      gCGATGGCCTGATTTTCAACAACCAGGGGCGGCGTGAGCGCCTGC‑CCTGGCCGCCACGCCCCGCCGTGACCGGCTTCAAGCGGCAAGGATGAACGATGCCTGTTAGATACTGCATGGCGGCTGCGCTGAGCCTGGCCTTGTCCATGGCCt                            <  1:804794/150‑1 (MQ=255)
                                                                                                                          tGGCCTGATTTTCAACAACCAGGGGCGGCGTGAGCGCCTGC‑CCTGGCCGCCACGCCCCGCCGTGACCGGCTTCAAGCGGCAAGGATGAACGAt                                                                                 >  1:652895/1‑93 (MQ=255)
                                                                                                                            gCCTGATTTTCAACAACCAGGGGCGGCGTGAGCGCCTGC‑CCTGGCCGCCACGCCCCGCCGTGACCGGCTTCAAGCGGCAAGGATGAACGATGCCTGTTAGATACTGCATGGCGGCTGCGCTGAGCCTGGCCTTGTCCATGGCCTATGccc                      >  1:1806265/1‑150 (MQ=255)
                                                                                                                             ccTGATTTTCAACAACCAGGGGCGGCGTGAGCGCCTGC‑CCTGGCCGCCACGCCCCGCCGTGACCGGCTTCAAGCGGCAAGGATGAACGATGCCTGTTAGATACTGCATGGCGGCTGCGCTGAGCCTGGCCTTGTCCATGGCCTATGCCCa                     >  1:1994069/1‑150 (MQ=255)
                                                                                                                             ccTGATTTTCAACAACCAGGGGCGGCGTGAGCGCCTGC‑CCTGGCCGCCACGCCCCGCCGTGACCGGCTTCAAGCGGCAAGGATGAACGATGCCTGTTAGATACTGCATGGCGGCTGCGCTGAGCCTGGCCTTGTCCATGGCCTATGCCCa                     >  2:2112866/1‑150 (MQ=255)
                                                                                                                              cTGATTTTCAACAACCAGGGGCGGCGTGAGCGCCTGC‑CCTGGCCGCCACGCCCCGCCGTGACCGGCTTCAAGCGGCAAg                                                                                           <  2:889075/79‑1 (MQ=255)
                                                                                                                              cTGATTTTCAACAACCAGGGGCGGCGTGAGCGCCTGC‑CCTGGCCGCCACGCCCCGCCGTGACCGGCTTCAAGCGGCAAg                                                                                           >  1:889075/1‑79 (MQ=255)
                                                                                                                              cTGATTTTCAACAACCAGGGGCGGCGTGAGCGCCTGC‑CCTGGCCGCCACGCCCCGCCGTGACCGGCTTCAAGCGGCAAGGATGAACGATGCCTGTTAGATACTGCATGGCGGCTGCGCTGAGCCTGGCCTTGTCCATGGCCTATGCCCaa                    <  2:2007705/150‑1 (MQ=255)
                                                                                                                               tGATTTTCAACAACCAGGGGCGGCGTGAGCGCCTGT‑CCTGGCCGCCACGCCCCGCCGTGACCGGCTTCAAGCGGCAAGGATGAACGATGCCTGTTAGATACTGCATGGCGGCTGCGCTGAGCCTGGCCTTGTCCATGGCCTATGCCCAag                   >  2:122400/1‑150 (MQ=255)
                                                                                                                               tGATTTTCAACAACCAGGGGCGGCGTGAGCGCCTGC‑CCTGGCCGCCACGCCCCGCCGTGACCGGCTTCAAGCGGCAAGGATGAACGATGCCTGTTAGATACTGCATGGCGGCTGCGCTGAGCCTGGCCTTGTCCATGGCCTATGCCCAag                   <  1:2025047/150‑1 (MQ=255)
                                                                                                                               tGATTTTCAACAACCAGGGGCGGCGTGAGCGCCTGC‑CCTGGCCGCCACGCCCCGCCGTGACCGGCTTCAAGCGGCAAGGATGAACGATGCCTGTTAGATACTGCATGGCGGCTGCGCTGAGCCTGGCCTTGTCCATGGCCTATGCCCAag                   >  1:1004260/1‑150 (MQ=255)
                                                                                                                                gATTTTCAACAGCCAGGGGCGGCGTGAGCGCCTGC‑CCTGGCCGCCACGCCCCGCCGTGACCGGCTTCAAGCGGCAAGGATGAACGATGCCTGTTAGATACTGCATGGCGGCTGCGCTGAGCCTGGCCTTGTCCATGGCCTATGCCCAaga                  <  2:962936/150‑1 (MQ=255)
                                                                                                                                gATTTTCAACAACCAGGGGCGGCGTGAGCGCCTGC‑CCTGGCCGCCACGCCCCGCCGTGACCGGCTTCAAGCGGCAAGGATGAACGATGCCTGTTAGATACTGCATGGCGGCTGCGCTGAGCCTGGCCTTGTCCATGGCCTATGCCCAagc                  <  2:2165362/150‑2 (MQ=255)
                                                                                                                                gATTTTCAACAACCAGGGGCGGCGTGAGCGCCTGC‑CCTGGCCGCCACGCCCCGCCGTGACCGGCTTCAAGCGGCAAGGATGAACGATGCCTGTTAGATACTGCATGGCGGCTGCGCTGAGCCTGGCCTTGTCCATGGCCTATGCCCAaga                  <  2:1004260/150‑1 (MQ=255)
                                                                                                                                       aacaacCAGGGGCGGCGTGAGCGCCTGccctggttgttgaaaatcaggccatcgctgtcgatgtcctgcagcacgatccctggcgccaggcgctgaccgcgggccagggtgcgcacttgctcgccgtagcgcagcaccaccacactggcg            <  1:1754124‑M2/150‑124 (MQ=255)
                                                                                                                                       aacaacCAGGGGCGGCGTGAGCGCCTGccctggttgttgaaaatcaggccatcgctgtcgatgtcctgcagcacgatccctggcgcc                                                                           <  1:431833‑M2/87‑61 (MQ=255)
                                                                                                                                       aacaacCAGGGGCGGCGTGAGCGCCTGC‑CCTGGCCGCCACGCCCCGCCGTGACCGGCTTCAAGCGGCAAGGATGAACGATGCCTGTTAGATACTGCATGGCGGCTGCGCTGAGCCTGGCCTTGTCCATGGCCTATGCCCAAGAGCCg              <  1:614532/147‑1 (MQ=255)
                                                                                                                                       aacaacCAGGGGCGGCGTGAGCGCCTGC‑CCTGGCCGCCACGCCCCGCCGTGACCGGCTTCAAGCGGCAAGGATGAACGATGCCTGTTAGATACTGCATGGCGGCTGCGCTGAGCCTGGCCTTGTCCATGGCCTATGCCCAAGAGCCg              >  2:614532/1‑147 (MQ=255)
                                                                                                                                       aacaacCAGGGGCGGCGTGAGCGCCTGC‑CCTGGCCGCCACGCCCCGCCGTGACCGGCTTCAAGCGGCAAGGATGAACGATGCCTGTTAGATACTGCATGGCGGCTGCGCTGAGCCTGGCCTTGTCCATGGCCTATGCCCAAGAGCCGgtg           >  1:733376/1‑150 (MQ=255)
                                                                                                                                       aacaacCAGGGGCGGCGTGAGCGCCTGC‑CCTGGCCGCCACGCCCCGCCGTGACCGGCTTCAAGCGGCAAGGATGAACGATGCCTGTTAGATACTGCATGGCGGCTGCGCTGAGCCTGGCCTTGTCCATGGCCTATGCCCAAGAGCCGgtg           >  1:1915849/1‑150 (MQ=255)
                                                                                                                                        acaacCAGGGGCGGCGTGAGCGCCTGccctggttgttgaaaatcaggccatcgctgtcgat                                                                                                    <  2:429548‑M2/61‑36 (MQ=255)
                                                                                                                                        acaacCAGGGGCGGCGTGAGCGCCTGccctggttgttgaaaatcaggccatcgctgtcgat                                                                                                    >  1:429548‑M2/1‑26 (MQ=255)
                                                                                                                                          aacCAGGGGCGGCGTGAGCGCCTGC‑CCTGGCCGCCACGCCCCGCCGTGACCGGCTTCAAGCGGCAAGGATGAACGATGCCTGTTAGATACTGCATGGCGGCTGCGCTGAGCCTGGCCTTGTCCATGGCCTATGCCCAAGAGCCGGTGTTc        >  2:765448/1‑150 (MQ=255)
                                                                                                                                          aacCAGGGGCGGCGTGAGCGCCTGC‑CCTGGCCGCCACGCCCCGCCGTGACCGGCTTCAAGCGGCAAGGATGAACGATGCCTGTTAGATACTGCATGGCGGCTGCGCTGAGCCTGGCCTTGTCCATGGCCTATGCCCAAGAGCCGGTGTTc        >  2:1854033/1‑150 (MQ=255)
                                                                                                                                            ccAGGGGCGGCGTGAGCGCCTGccctggttgttgaaaatcaggccatcgctgtcgatgtcctgcagcacgatccctggcgccaggcgctgaccgcgggccagggtgcgcacttgctcgccgtagcgcagcaccaccacactggcggccaa       <  1:1610969‑M2/150‑129 (MQ=255)
                                                                                                                                             cAGGGGCGGCGTGAGCGCCTGC‑CCTGGCCGCCACGCCCCGCCGTGACCGGCTTCAATCGGCAAGGATGAACGATGCCTGTTAGATACTGCATGGCGGCTGCGCTGAGCCTGGCCTTGTCCATGGCCTATGCCCAAGAGCCGGTGTTCGAt     >  1:836362/1‑150 (MQ=255)
                                                                                                                                             cAGGGGCGGCGTGAGCGCCTGC‑CCTGGCCGCCACGCCCCGCCGTGACCGGCTTCAAGCGGCAAGGATGAACGATGCCTGTTAGATACTGCATGGCGGCTGCGCTGAGCCTGGCCTTGTCCATGGCCTATGCCCAAGAGCCGGTGTTCGAt     <  2:1972279/150‑1 (MQ=255)
                                                                                                                                             cAGGGGCAGCGTGAGCGCCTGC‑CCTGGCCGCCACGCCCCGCCGTGACCGGCTTCAAGCGGCAAGGATGAACGATGCCTGTTAGATACTGCATGGCGGCTGCGCTGAGCCTGGCCTTGTCCATGGCCTATGCCCAAGAGCCGGTGTTCGAt     <  2:800465/150‑1 (MQ=255)
                                                                                                                                              aGGGcaggcgctcacgccgcccctggttgttgaaaatcaggccatcgctgtcgatgtcctgcagcacgatccctggcgccaggcgctgaccgcgggccagggtgcgcacttgctcgccgtagcgcagcaccaccacactggcggccaatg     >  2:1723721‑M1/1‑4 (MQ=255)
                                                                                                                                              aGGGcaggcgctcacgccgcccctggttgttgaaaatcaggccatcgctgtcgatgtcctgcagcacgatccctggcgccaggcgctgaccgcgggccagggtgcgcacttgctcgccgtagcgcagcaccaccacactggcggccaatg     >  1:1516668‑M1/1‑4 (MQ=255)
                                                                                                                                               ggggCGGCGTGAGCGCCTGG‑CCTGGCCGCCACGCCCCGCCGTGACCGGCTTCAAGCGGCAAGGATGAACGATGCCTGTTAGATACTGCATGGCGGCTGCGCTGAGCCTGGCCTTGTCCATGGCCTATGCCCAAGAGCCGGTGTTCGATGa   <  2:1824570/150‑1 (MQ=255)
                                                                                                                                                 gcaggcgctcacgccgcccctggttgttgaaaatcaggccatcgctgtcgatgtcctgcagcacgatccctggcgccaggcgctgaccgcgggccagggtgcgcacttgctcgccgtagcgcagcaccaccacactggcggccaatggct  <  2:1789272‑M1/150‑150 (MQ=255)
                                                                                                                                                 |                                                                                                                                                     
GGCCTCAAGGCCCAGCCATTGGCCGCCAGTGTGGTGGTGCTGCGCTACGGCGAGCAAGTGCGCACCCTGGCCCGCGGTCAGCGCCTGGCGCCAGGGATCGTGCTGCAGGACATCGACAGCGATGGCCTGATTTTCAACAACCAGGGGCGGCGTGAGCGCCTGC‑CCTGGCCGCCACGCCCCGCCGTGACCGGCTTCAAGCGGCAAGGATGAACGATGCCTGTTAGATACTGCATGGCGGCTGCGCTGAGCCTGGCCTTGTCCATGGCCTATGCCCAAGAGCCGGTGTTCGATGAC  >  NC_002947/1195733‑1196026

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.