New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 2236962 =90 (1.020)7 (0.090) 6/214 NT 9.0% intergenic (+14/+114) uvrB/PP_1975 uvrABC excinuclease protein B/EmrB/QacA family drug resistance transporter
?NC_002947 2237053 = 63 (0.820)intergenic (+105/+23) uvrB/PP_1975 uvrABC excinuclease protein B/EmrB/QacA family drug resistance transporter

Only 100 of 117 total aligned reads displayed.

GCCGGGCGAGATCACCAAGCGCATCAAGCAGTTGGAAGAGAAAATGATGCAGTTCGCCCGCGACCTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCGG  >  NC_002947/2236813‑2237108
                                                                                                                                                     |                                                                                                                                                  
gCCGGGCGAGATCACCAAGCGCATCAAGCAGTTGGAAGAGAAAATGATGCAGTTCGCCCGCGACCTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGc                                                                                                                                                    >  2:1971499/1‑150 (MQ=255)
   gcgctgatcatggcttacaacgatgccttccactttgtcgggatcgggttggcggtgagcatggtggcggtgctgctgacccgcaagttgccggaagggttgaaggctggggaagcccattgaggctattacagatcagatgcggtCCCt                                                                                                                                                 <  1:1793979‑M1/4‑1 (MQ=255)
    cgctgatcatggcttacaacgatgccttccactttgtcgggatcgggttggcggtgagcatggtggcggtgctgctgacccgcaagttgccggaagggttgaaggctggggaagcccattgaggctattacagatcagatgcggtCCCtg                                                                                                                                                >  1:1765887‑M1/146‑150 (MQ=255)
      ctgatcatggcttacaacgatgccttccactttgtcgggatcgggttggcggtgagcatggtggcggtgctgctgacccgcaagttgccggaagggttgaaggctggggaagcccattgaggctattacagatcagatgcggtCCCtgtg                                                                                                                                              >  2:1355608‑M1/144‑150 (MQ=255)
       tgatcatggcttacaacgatgccttccactttgtcgggatcgggttggcggtgagcatggtggcggtgctgctgacccgcaagttgccggaagggttgaaggctggggaagcccattgaggctattacagatcagatgcggtCCCTGTgg                                                                                                                                             >  1:2386748‑M1/143‑150 (MQ=255)
       tgatcatggcttacaacgatgccttccactttgtcgggatcgggttggcggtgagcatggtggcggtgctgctgacccgcaagttgccggaagggttgaaggctggggaagcccattgaggctattacagatcagatgcggtCCCTGTgg                                                                                                                                             >  2:1252055‑M1/143‑150 (MQ=255)
       gagaGCACCAAGCGCATCAAGCAGTTGGAAGAGAAAATGATGCAGTTCGCCCGCGACCTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTgg                                                                                                                                             <  1:810710/150‑1 (MQ=255)
         atcatggcttacaacgatgccttccactttgtcgggatcgggttggcggtgagcatggtggcggtgctgctgacccgcaagttgccggaagggttgaaggctggggaagcccattgaggctattacagatcagatgcggtCCCTGTGGGa                                                                                                                                           >  2:353436‑M1/141‑150 (MQ=255)
             tggcttacaacgatgccttccactttgtcgggatcgggttggcggtgagcatggtggcggtgctgctgacccgcaagttgccggaagggttgaaggctggggaagcccattgaggctattacagatcagatgcggtCCCTGTGGGAGCgg                                                                                                                                       <  1:1072579‑M1/14‑1 (MQ=255)
             aCCGAGCGCATCAAGCAGTTGGAAGAGAAAATGATGCAGTTCGCCCGCGACCTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCgg                                                                                                                                       <  1:1546887/150‑1 (MQ=255)
             aCCAAGCGCATCAAGCAGTTGGAAGAGAAAATGATGCAGTTCGCCCGCGACCTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCgg                                                                                                                                       <  1:393400/150‑1 (MQ=255)
             aCCAAGCGCATCAAGCAGTTGGAAGAGAAAATGATGCAGTTCGCCCGCGACCTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCgg                                                                                                                                       >  2:1381192/1‑150 (MQ=255)
             aCCAAGCGCATCAAGCAGTTGGAAGAGAAAATGATGCAGTTCGCCCGCGACCTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCgg                                                                                                                                       <  2:1476452/150‑1 (MQ=255)
             aCCAAGCGCATCAAGCAGTTGGAAGAGAAAATGATGCAGTTCGCCCGCGACCTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCgg                                                                                                                                       >  1:1511298/1‑150 (MQ=255)
             aCCAAGCGCATCAAGCAGTTGGAAGAGAAAATGATGCAGTTCGCCCGCGACCTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCgg                                                                                                                                       <  1:1971499/150‑1 (MQ=255)
             aCCAAGCGCATCAAGCAGTTGGAAGAGAAAATGATGCAGTTCGCCCGCGACCTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCgg                                                                                                                                       >  1:682247/1‑150 (MQ=255)
              ggcttacaacgatgccttccactttgtcgggatcgggttggcggtgagcatggtggcggtgctgctgacccgcaagttgccggaagggttgaaggctggggaagcccattgaggctattacagatcagatgcggtCCCTGTGGGAGCggg                                                                                                                                      <  1:1390255‑M1/15‑1 (MQ=255)
              ccAAGCGCATCAAGCAGTTGGAAGAGAAAATGATGCAGTTCGCCCGCGACCTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGa                                                                                                                                           <  1:1276413/145‑1 (MQ=255)
              ccAAGCGCATCAAGCAGTTGGAAGAGAAAATGATGCAGTTCGCCCGCGACCTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGa                                                                                                                                           >  2:1276413/1‑145 (MQ=255)
               gcttacaacgatgccttccactttgtcgggatcgggttggcggtgagcatggtggcggtgctgctgacccgcaagttgccggaagggttgaaggctggggaagcccattgaggctattacagatcagatgcggtCCCTGTGGGAGCGGGc                                                                                                                                     >  1:2312731‑M1/135‑150 (MQ=255)
                aaGCGCATCAAGCAGTTGGAAGAGAAAATGATGCAGTTCGCCCGCGACCTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCg                                                                                                                                    >  1:1403355/1‑150 (MQ=255)
                 aGCGCATCAAGTAGTTGGAAGAGAAAATGATGCAGTTCGCCCGCGACCTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGcac                                                                                                                                   <  1:1099011/150‑3 (MQ=255)
                     aacgatgccttccactttgtcgggatcgggttggcggtgagcatggtggcggtgctgctgacccgcaagttgccggaagggttgaaggctggggaagcccattgaggctattacagatcagatgcggtCCCTGTGggagagg                                                                                                                                       <  1:34629‑M1/14‑4 (MQ=255)
                     aacgatgccttccactttgtcgggatcgggttggcggtgagcatggtggcggtgctgctgacccgcaagttgccggaagggttgaaggctggggaagcccattgaggctattacagatcagatgcggtCCCTGTGGGAGCgg                                                                                                                                       >  2:34629‑M1/129‑142 (MQ=255)
                         aaGCAGTTGGAAGAGAAAATGATGCAGTTCGCCCGCGACCTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCga                                                                                                                           >  2:539787/1‑150 (MQ=255)
                             aGTTGGAAGAGAAAATGATGCAGTTCGCCCGCGACCTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCgaagaa                                                                                                                       <  1:27220/150‑1 (MQ=255)
                              ttccactttgtcgggatcgggttggcggtgagcatggtggcggtgctgctgacccgcaagttgccggaagggttgaaggctggggaagcccattgaggctattacagatcagatgcggtCCCtgtg                                                                                                                                              >  2:2060051‑M1/120‑126 (MQ=255)
                              ttccactttgtcgggatcgggttggcggtgagcatggtggcggtgctgctgacccgcaagttgccggaagggttgaaggctggggaagcccattgaggctattacagatcagatgcggtCCCtgtg                                                                                                                                              <  1:2060051‑M1/7‑1 (MQ=255)
                               ttGGAAGAGAAAATGATGCAGTTCGCCCGCGACCTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAAtt                                                                                                                     >  2:2214108/1‑150 (MQ=255)
                                  gAAGAGAAAATGATGCAGTTCGCCCGCGACCTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCaa                                                                                                                  >  1:885852/1‑150 (MQ=255)
                                       gaAAATGATGCAGTTCGCCCGCGACCTGGAGTTCGAAGCTGCGGCGCATTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCgg                                                                                                             <  1:539787/150‑1 (MQ=255)
                                        aaaaTGATGCAGTTCGCCCGCGACCTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCgaa                                                                                                                          <  1:990417/136‑1 (MQ=255)
                                        aaaaTGATGCAGTTCGCCCGCGACCTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCgaa                                                                                                                          >  2:990417/1‑136 (MQ=255)
                                        aaaaTGATGCAGTTCGCCCGCGACCTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGt                                                                                                            >  1:276382/1‑150 (MQ=255)
                                          aaTGATGCAGTTCGCCCGCGACCTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGtgg                                                                                                          >  1:188101/1‑150 (MQ=255)
                                            tgatgCAGTTCGCCCGCGACCTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGtggct                                                                                                        <  1:1274249/150‑1 (MQ=255)
                                             gatgCAGTTCGCCCGCGACCTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCGTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGtggctg                                                                                                       <  2:1746978/150‑1 (MQ=255)
                                                 cAGTTCGCCCGCGACCTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCAc                                                                                                   >  1:825012/1‑150 (MQ=255)
                                                   gTTCGCCCGCGACCTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCg                                                                                                 >  1:1065069/1‑150 (MQ=255)
                                                    ttCGCCCGCGACCTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCgg                                                                                                >  1:689681/1‑150 (MQ=255)
                                                        cccGCGACCTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTgc                                                                                            >  1:1806895/1‑150 (MQ=255)
                                                         ccGCGACCTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTgcg                                                                                           >  1:1624064/1‑150 (MQ=255)
                                                         ccGCGACCTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTgcg                                                                                           >  2:1218247/1‑150 (MQ=255)
                                                          cgcgACCTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTgcgc                                                                                          >  1:1018786/1‑150 (MQ=255)
                                                                cTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCa                                                                                                                   <  2:1185524/119‑1 (MQ=255)
                                                                cTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCa                                                                                                                   >  1:1185524/1‑119 (MQ=255)
                                                                      ttCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCTTCTGCGCCGGTGTTCGCgg                                                                              <  2:825012/150‑1 (MQ=255)
                                                                      cggtgctgctgacccgcaagttgccggaaggtttgaaggctggggaagcccattgaggctattacagatcagatgcggtCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCgg                                                                              >  1:2122039‑M1/80‑150 (MQ=255)
                                                                      cggtgctgctgacccgcaagttgccggaagggttgaaggctggggaagcccattgaggctattacagatcagatgcgggCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCgg                                                                              >  1:87617‑M1/80‑150 (MQ=255)
                                                                       tCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCggg                                                                             <  2:1065069/150‑1 (MQ=255)
                                                                       ggtgctgctgacccgcaagttgccggaagggttgaaggctggggaagcccattgaggctattacagatcagatgcgggCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCggg                                                                             <  1:1852739‑M1/72‑1 (MQ=255)
                                                                         gAAGCTGCGGCGCAGTTGAGTGACGAGATTGCGCCGATGCGGGACAGGTTGCCAGGGAGCTGAAGCCGGGCTCTTGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCa                                                                           >  1:45021/1‑150 (MQ=21)
                                                                          aaGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCAt                                                                          >  1:1997963/1‑150 (MQ=255)
                                                                           ctgctgacccgcaagttgccggaagggttgaaggcaggggaagcccattgaggctattacagatcagatgcggtCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATg                                                                         >  2:1291216‑M1/75‑150 (MQ=255)
                                                                             cTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGcc                                                                       <  1:815877/150‑1 (MQ=255)
                                                                              tGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGGAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGccc                                                                      <  1:2331590/150‑1 (MQ=255)
                                                                              tGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCcg                                                                                                                              <  1:411684/94‑1 (MQ=255)
                                                                              tGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCcg                                                                                                                              >  2:411684/1‑94 (MQ=255)
                                                                              tGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGccc                                                                      >  2:664550/1‑150 (MQ=255)
                                                                                    gcAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTccc                                                                <  1:664550/150‑1 (MQ=255)
                                                                                     cAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCca                                                               <  2:1997963/150‑1 (MQ=255)
                                                                                     cAGTTGAGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCca                                                               <  2:45021/150‑1 (MQ=255)
                                                                                       gTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGc                                                                                               >  2:208321/1‑116 (MQ=255)
                                                                                       gTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGc                                                                                               <  1:208321/116‑1 (MQ=255)
                                                                                              cggaagggttgaaggctggggaagcccattgaggctattacagatcagatgcggtCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCAt                                                                          <  1:450631‑M1/75‑1 (MQ=255)
                                                                                               ggaagggttgaaggctggggaagcccattgaggctattacagatcagatgcgggCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGc                                                     >  2:1852739‑M1/55‑150 (MQ=255)
                                                                                                 gagaTTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGgt                                                                                      >  2:1736061/1‑115 (MQ=255)
                                                                                                 gagaTTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGgt                                                                                      <  1:1736061/115‑1 (MQ=255)
                                                                                                 gagaTTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCat                                                   >  2:544882/1‑150 (MQ=255)
                                                                                                 gagaTTGCGCAGCTGCGGGAGCGGTTGATAAGCAGATGAAGCCGGGTGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCat                                                   <  2:682247/150‑1 (MQ=255)
                                                                                                    aTTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACAGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCatctg                                                >  2:465547/1‑150 (MQ=255)
                                                                                                     ttGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCgg                                                                              <  1:1902940/119‑1 (MQ=255)
                                                                                                     ttGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCgg                                                                              >  2:1902940/1‑119 (MQ=255)
                                                                                                     ttGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCatcatt                                               <  2:188101/150‑4 (MQ=255)
                                                                                                      tGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCatctgat                                              <  2:1247219/150‑1 (MQ=255)
                                                                                                      tGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGCGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCatctgat                                              <  1:1332342/150‑1 (MQ=255)
                                                                                                       gcgcAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCatctgatc                                             <  2:885852/150‑1 (MQ=255)
                                                                                                         gcAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCatctgatctg                                           >  2:975689/1‑150 (MQ=255)
                                                                                                              tGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATa                                      <  1:1225101/150‑1 (MQ=255)
                                                                                                                      cGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAAt                              <  2:1018786/150‑1 (MQ=255)
                                                                                                                      cGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAAt                              <  2:1511298/150‑1 (MQ=255)
                                                                                                                        gTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATgg                            >  1:993264/1‑150 (MQ=255)
                                                                                                                        gTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATgg                            <  2:689681/150‑1 (MQ=255)
                                                                                                                           gATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAAtt                                                                                                                     >  2:1679629/1‑58 (MQ=255)
                                                                                                                             tCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAg                                                            <  1:276363/113‑1 (MQ=255)
                                                                                                                             tCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAg                                                            >  2:276363/1‑113 (MQ=255)
                                                                                                                              cagcagCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTcc                      <  1:544882/150‑1 (MQ=255)
                                                                                                                               agcagcTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGGAAAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGATGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTcac                     >  2:1781440/1‑148 (MQ=255)
                                                                                                                                gcagcTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTcccc                    >  2:984602/1‑150 (MQ=255)
                                                                                                                                gcagcTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCGGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCATCTGATGTGTAATAACCTCAATGGGCTTgccc                    >  1:324504/1‑150 (MQ=255)
                                                                                                                                 cagcTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGTACCGCGTCTTATCTGTAATAGCCTCAATGGGATTCcaca                   >  2:397298/1‑150 (MQ=25)
                                                                                                                                     tGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATgg                            >  1:1366259/1‑137 (MQ=255)
                                                                                                                                     tGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATgg                            <  2:1366259/137‑1 (MQ=255)
                                                                                                                                      gAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCtt              >  1:140235/1‑150 (MQ=255)
                                                                                                                                         gCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCaa           >  1:728891/1‑150 (MQ=255)
                                                                                                                                          ccGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAAc          <  2:140235/150‑1 (MQ=255)
                                                                                                                                          ccGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCAGCTGATCGGTAATAGCCTCAATGGGCTTCCACAGCATTCTAc          >  2:1000457/1‑150 (MQ=25)
                                                                                                                                               cgcgGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTc     <  1:984602/150‑1 (MQ=255)
                                                                                                                                                 cgGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCACCGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCg   <  1:1000457/150‑1 (MQ=255)
                                                                                                                                                  gggCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCgg  >  1:1045003/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                  
GCCGGGCGAGATCACCAAGCGCATCAAGCAGTTGGAAGAGAAAATGATGCAGTTCGCCCGCGACCTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCGG  >  NC_002947/2236813‑2237108

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.