New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2418899	65 (0.730)	10 (0.120)	9/234	NT	13.8%	coding (7/1668 nt)	ctpH	methyl‑accepting chemotaxis protein CtpH
	?	NC_002947	= 2418908	63 (0.750)					coding (16/1668 nt)	ctpH	methyl‑accepting chemotaxis protein CtpH

CTGCAATTCACCACGGGCTAGCGTGTCGTGGCCTTGTAACATTTCTGTAGTAATTGCCTGAGAAGATTTGCCTCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTAAATCCCTCAGAGTGCAAATTCTCTCGCTGCTCGGCGGCAGTGTGCTGGCGATGCTGCTGATCGCCCTGGTGTGTTTCCAGTTCCTGTCGTCCAG  >  NC_002947/2418752‑2419047                                                                                                                                                    |                                                                                                                                                        ctacAATTCACCACGGGCTAGCGTGTCGTGGCCTTGTAACATTTCTGTAGTAATTGCCTGAGAAGATTTGCCTCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑Tg                                                                                                                                                    <  2:1748772/147‑1 (MQ=255)    cAATTCACCACGGGCTAGCGTGTCGTGGCCTTGTAACATTTCTGTAGTAATTGCCTGAGAAGATTTGCCTCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGCcgctg                                                                                                                                                    >  2:641629‑M1/1‑145 (MQ=255)       ttCCCCACTGGCTAGCGTTTCGTGGCCTTGTAACCTTTCTCTAGTAATTGCCTGAGAAGATTTTCCTGAACTGTTGCGTAAGTGCTCTCCCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGc                                                                                                                                              <  2:175892/150‑1 (MQ=255)       ttCACCACGGGCTAGCGTGTCGTGGCCTTGTAACATTTCTGTAGTAATTGCCTGAGAAGATTTGCCTCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAgg                                                                                                                                              >  2:1550389/1‑149 (MQ=255)           ccacGGGCTAGCGTGTCGTGGCCTTGTAACATTTCTGTAGTAATTGCCTGAGAAGATTTGCCTCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGgcc                                                                                                                                          >  1:1192936‑M2/1‑147 (MQ=255)           ccacGGGCTAGCGTGTCGTGGCCTTGTAACATTTCTGTAGTAATTGCCTGAGAAGATTTGCCTCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGAGgcc                                                                                                                                          <  1:1697043‑M2/150‑4 (MQ=255)            cacGGGCTAGCGTGTCATGGCCTTGTAACATTTCTGTAGTAATTGCCTGAGAAGATTTGCCTCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGgcct                                                                                                                                         >  2:1347768‑M2/1‑146 (MQ=255)             acGGGCTAGCGTGTCGTGGCCTTGTAACATTTCTGTAGTAATTGCCTGAGAAGATTTGCCTCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGCcgctgtacagcctc                                                                                                                                           <  1:641629‑M1/150‑15 (MQ=255)               gggCTAGCGTGTCGTGGCCTTGTAACATTTCTGTAGTAATTGCCTGAGAAGATTTGCCTCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGCcgctgtacagcctcat                                                                                                                                         <  2:1948541‑M1/150‑17 (MQ=255)                ggCTAGCGTGTCGTGGCCTTGTAACATTTCTGTAGTAATTGCCTGAGAAGATTTGCCTCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGc                                                                                                                                     <  2:1916869/150‑1 (MQ=255)                 gCTAGCGTGTCGTGGCCTTGTAACATTTCTGTAGTAATTGCCTGAGAAGATTTGCCTCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGcc                                                                                                                                    >  1:1631840/1‑150 (MQ=255)                  cTAGCGTGTCGTGGCCTTGTAACATTTCTGTAGTAATTGCCTGAGAAGATTTGCCTCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGCcgctgtacagcctcattac                                                                                                                                      <  2:2073188‑M1/150‑20 (MQ=255)                   tAGCGTGTCGTGGCCTTGTAACATTTCTGTAGTAATTGCCTGAGAAGATTTGCCTCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTa                                                                                                                                  >  1:1639187/1‑150 (MQ=255)                   tAGCGTGCCCGGGCCTTGTAACATTTCTGTAGTAATTGCCTGAGAAGATTTGCCTCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGCcgctgtacagcctcattact                                                                                                                                     <  1:1910069‑M1/150‑21 (MQ=255)                          tCGTGGCCTTGTAACATTTCTGTAGTAATTGCCTGAGAAGATTTGCCTCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCctc                                                                                                                           <  2:1631840/150‑1 (MQ=255)                            gTGGCCTTGTAACATTTCTGTAGTAATTGCCTGAGAAGATTTGCCTCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTg                                                                                                                         >  1:1319812/1‑150 (MQ=255)                               gCCTTGTAACATTTCTGTAGTAATTGCCTGAGAAGATTTGCCTCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGtt                                                                                                                      >  1:1617678/1‑150 (MQ=255)                                    gTAACATTTCTTTAGTAATTGCCTGAGAAGATTTGCCTCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGACAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCgag                                                                                                                 <  1:1014644/150‑1 (MQ=255)                                    gTAACATTTCTGTAGTAATTGCCTGAGAAGATTTGCCTCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCgag                                                                                                                 >  1:490073/1‑150 (MQ=255)                                     tAACATTTCTGTAGTAATTGCCTGAGAAGATTTGCCTCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTAAAGTGGCTTCAGCCTATTCCCTCTTTTACCgaga                                                                                                                >  2:749810/1‑150 (MQ=255)                                         aTTTCTGTAGTAATTGCCTGAGAAGATTTGCCTCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGTC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCt                                                                                                            >  1:2068597/1‑150 (MQ=255)                                          tttCTGTAGTAATTGCCTGAGAAGATTTGCCTCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTc                                                                                                           >  1:1751017/1‑150 (MQ=255)                                             cTGTAGTAATTGCCTGAGAAGATTTGCCTCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGCcgctgtacagcctcattactg                                                                                                                                    <  2:1629568‑M1/125‑22 (MQ=255)                                             cTGTAGTAATTGCCTGAGAAGATTTGCCTCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGCcgctgtacagcctcattactg                                                                                                                                    >  1:1629568‑M1/1‑104 (MQ=255)                                               gtagtaATTGCCTGAGAAGATTTGCCTCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGt                                                                                                      >  2:288609/1‑150 (MQ=255)                                                tagtaATTGCCTGAGAAGATTTGCCTCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGACCTCAGCCTACTCCCTCTGGTTCCGAGGCCCTCGATGtt                                                                                                     >  1:2066027/1‑150 (MQ=255)                                                     aTTGCCTGAGAAGATTTGCCTCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTa                                                                                                <  2:2066027/150‑1 (MQ=255)                                                         ccTGAGAAGATTTGCCTCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTAAATc                                                                                            >  1:1482720/1‑150 (MQ=255)                                                          cTGAGAAGATTTGCCTCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGc                                                                                                   <  2:1058317/142‑1 (MQ=255)                                                          cTGAGAAGATTTGCCTCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGc                                                                                                   >  1:1058317/1‑142 (MQ=255)                                                           tGAGAAGATTTGCCTCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTAAATccc                                                                                          >  2:2057489/1‑150 (MQ=255)                                                             agaagaTTTGCCTCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCctc                                                                                                                           <  2:811584/115‑1 (MQ=255)                                                             agaagaTTTGCCTCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCctc                                                                                                                           >  1:811584/1‑115 (MQ=255)                                                              gaagaTTTGCCTCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTAAATCCCTCa                                                                                       <  2:2134111/150‑1 (MQ=255)                                                              gaagaTTTGCCTCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTAAATCCCTCa                                                                                       <  2:1639187/150‑1 (MQ=255)                                                                agaTTTGCCTCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTAAATCCCTCaga                                                                                     <  2:1751017/150‑1 (MQ=255)                                                                agaTTTGCCTCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTAAATCCCTCaga                                                                                     <  1:288609/150‑1 (MQ=255)                                                                agaTTTGCCTCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTAAATCCCTCaga                                                                                     <  1:114244/150‑1 (MQ=255)                                                                        cTCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTAAATCCCTCAGAGTGCAAAt                                                                             <  2:1482720/150‑1 (MQ=255)                                                                         tCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGCCGCTGTACAGCtcattactggcag                                                                                                                                 >  2:1410801‑M2/1‑88 (MQ=255)                                                                         tCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGCCGCTGTACAGCtcattactggcag                                                                                                                                 <  1:1410801‑M2/101‑14 (MQ=255)                                                                         tCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTAAATCCCt                                                                                         <  1:1393013/137‑1 (MQ=255)                                                                         tCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTAAATCCCt                                                                                         >  2:1393013/1‑137 (MQ=255)                                                                            aCTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTAAACCCCTCAGAGTGCAAATtctc                                                                         <  1:1550389/150‑1 (MQ=255)                                                                             cTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTAAATCCCTCAGAGTGCAAATtctct                                                                        <  1:1433766/150‑1 (MQ=255)                                                                             cTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTGTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTAAATCCCTCAGAGTGCAAATtctct                                                                        <  2:1617678/150‑1 (MQ=255)                                                                                ttGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGCcgctgtacagcctcattactg                                                                                                                                    <  2:979262‑M1/90‑22 (MQ=255)                                                                                ttGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGCcgctgtacagcctcattactg                                                                                                                                    >  1:979262‑M1/1‑69 (MQ=255)                                                                                  gCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTAc                                                                                                                                 <  1:2311543/88‑1 (MQ=255)                                                                                  gCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTAc                                                                                                                                 >  2:2311543/1‑88 (MQ=255)                                                                                   cGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTAAATCCCTCAGAGTGCAAATTCTCTCgctgc                                                                  >  2:576134/1‑150 (MQ=255)                                                                                            tCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTAAATCCCTCAGAGTGCAAATTCTCTCGCTGCTCggcggcc                                                         >  1:1025993/1‑149 (MQ=255)                                                                                            tCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTAAATCCCTCAGAGTGCAAATTCTCTCGCTGCTCGGCGGCa                                                         >  1:2360778/1‑150 (MQ=255)                                                                                            tCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTAAATCCCTCAGAGTGAAAATTCTCTCGCTGCTCGGCGGCa                                                         >  2:497136/1‑150 (MQ=255)                                                                                            tCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCGACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTAAATCCCTCAGAGTGCAAATTCTCTCGCTGCTCGGCGGCa                                                         <  1:2057017/150‑1 (MQ=255)                                                                                              gACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGGAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTAAATCCCTCAGAGTGCAAATTCTCTCGCTGCTCGGCGGCAgt                                                       >  1:2001468/1‑150 (MQ=255)                                                                                                ccTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTAAATCCCTCAGAGTGCAAATTCTCTCGCTGCTCGGCGGCAgtgt                                                     >  1:2374022/1‑150 (MQ=255)                                                                                                      tGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTAAATCCCTCAGAGTGCAAATTCTCTCGCTGCTCGGCGGCAGTGTGCTGGc                                               <  2:1319812/150‑1 (MQ=255)                                                                                                        ccATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTAAATCCCTCAGAGTGCAAATTCTCTCGCTGCTCGGCTGCAGTGTGCTGGCGa                                             >  1:2356536/1‑150 (MQ=255)                                                                                                        ccATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTAAATCCCTCAGAGTGCAAATTCTCTCGCTGCTCGGCGGCAGTGTGCTGGCGa                                             >  1:332479/1‑150 (MQ=255)                                                                                                        ccATTGCGTGATGGCAGCTTTTTTTTATCCTGCCAGTAATGAGGC‑‑‑TGTACACCGGCCTCAGCCTACTCCCGCTGTTTCAGAGTCCCTCGATGTTGCGTGATTCTCTCAGTGTGCAAATTCTCTCGCTCATCGGCGGCAGTGTGCTGGCGa                                             <  2:1039883/150‑1 (MQ=255)                                                                                                         cATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGc                                                                                                                                     >  1:620704/1‑61 (MQ=255)                                                                                                         cATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGc                                                                                                                                     <  2:620704/61‑1 (MQ=255)                                                                                                             gCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGATACCCTCGATGTTGCGTAAATCCCTCAGAGTGCAAATTCTCTCGCTGCTCGGCGGCAGTGTGCTGGCGAtgctg                                        <  2:2374022/150‑1 (MQ=255)                                                                                                               gTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTAAATCCCTCAGAGTGCAAATtctct                                                                        <  1:1958977/116‑1 (MQ=255)                                                                                                               gTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTAAATCCCTCAGAGTGCAAATtctct                                                                        >  2:1958977/1‑116 (MQ=255)                                                                                                                     gCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGtt                                                                                                     <  2:334804/81‑1 (MQ=255)                                                                                                                     gCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGtt                                                                                                     >  1:334804/1‑81 (MQ=255)                                                                                                                       aGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTAAATCCCTCAGAGTGCAAATTCTCTCGCTGCTCGGCGGCAGTGTGCTGGCGATGCTGCTGATCGccc                              >  1:904849/1‑150 (MQ=255)                                                                                                                                ttGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTAAATCCCTCAGAGTGCAAATTCTCTCGCTGCTCGGCGGCAGTGTGCTGGCGATGCTGCTGATCGCCCTGGTGTGtt                     <  2:2377734/150‑1 (MQ=255)                                                                                                                                  ggCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTAAATCCCTCAGAGTGCAAATTCTCTCGCTGCTCGGCGGCAGTGTGCTGGCGATGCTGCTGATCGCCCTGGTGTGTTTc                   <  2:490073/150‑1 (MQ=255)                                                                                                                                   gCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTAAATCCCTCAGAGTGCAAATTCTCTCGCTGCTCGGCGGCAGTGTGCTGGCGATGCTGCTGATCGCCCTGGTGTGTTTcc                  >  2:1407455/1‑150 (MQ=255)                                                                                                                                    ccTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTAAATCCCTCAGAGTGCAAATTCTCTCGCTGCTCGGCGGCAGTGTGCTGGCGATGCTGCTGATCGCCCTGGTGTGTTTCCa                 <  1:749810/150‑1 (MQ=255)                                                                                                                                     cTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTAAATCCCTCAGAGTGCAAATtctctc                                                                       >  2:1693095/1‑95 (MQ=255)                                                                                                                                     cTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTAAATCCCTCAGAGTGCAAATtctctc                                                                       <  1:1693095/95‑1 (MQ=255)                                                                                                                                     cTGCCAGTAATGAG‑ctgtacagcggcctcattactggcaggccaaaaaaaagctgccatcacgcaatggcagccaggtcgagcacttacgcaacagttga                                                                    >  2:1410801‑M1/1‑15 (MQ=255)                                                                                                                                     cTGCCAGTAATGAG‑ctgtacagcggcctcattactggcaggccaaaaaaaagctgccatcacgcaatggcagccaggtcgagcacttacgcaacagttga                                                                    <  1:1410801‑M1/101‑87 (MQ=255)                                                                                                                                        ccAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTAAATCCCTCAGAGTGCAAATTCTCTCGCTGCTCGGCGGCAGTGTGCTGGCGATGCTGCTGATCGCCCTGGTGTGTTTCCAGTTc             >  2:107184/1‑150 (MQ=255)                                                                                                                                        ccAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTAAATCCCTCAGAGTGCAAATTCTCTCGCTGCTCGGCGGCAGTGTGCTGGCGATGCTGCTGATCGCCCTGGTGTGTTTCCAGTTc             >  1:1422310/1‑150 (MQ=255)                                                                                                                                        ccAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTAAATCCCTCAGAGTGCAAATTCTCTCGCTGCTCGGCGGCAGTGTGCTGGCGATGCTGCTGATCGCCCTGGTGTGTTTCCAGTTc             <  2:904849/150‑1 (MQ=255)                                                                                                                                         cAGTAATGAGGC‑‑‑TGTACAGCGgcctcattactggcaggccaaaaaaaagctgccatcacgcaatggcagccaggtcgagcacttacgcaacagttgaggcaaatcttctcaggcaattactacag                                     <  2:1629568‑M2/125‑105 (MQ=255)                                                                                                                                         cAGTAATGAGGC‑‑‑TGTACAGCGgcctcattactggcaggccaaaaaaaagctgccatcacgcaatggcagccaggtcgagcacttacgcaacagttgaggcaaatcttctcaggcaattactacag                                     >  1:1629568‑M2/1‑21 (MQ=255)                                                                                                                                         cAGTAATGAGGC‑‑‑TGTACAGCGgcctcattactggcaggccaaaaaaaagctgccatcacgcaatggcagccaggtcgagcacttacgcaa                                                                        <  2:979262‑M2/90‑70 (MQ=255)                                                                                                                                         cAGTAATGAGGC‑‑‑TGTACAGCGgcctcattactggcaggccaaaaaaaagctgccatcacgcaatggcagccaggtcgagcacttacgcaa                                                                        >  1:979262‑M2/1‑21 (MQ=255)                                                                                                                                          aGTAATGAGGC‑‑‑TGTACAGCGgcctcattactggcaggccaaaaaaaagctgccatcacgcaatggcagccaggtcgagcacttacgcaacagttgaggcaaatcttctcaggcaattactacagaaatgttacaaggcccgggcacgcta           <  1:1910069‑M2/150‑131 (MQ=255)                                                                                                                                          aGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTAAATCCCTCAGAGTGCAAATTCTCTCGCTGCTCGGCGGCAGTGTGCTGGCGATGCTGCTGATCGCCCTGGTGTGTTTCCAGTTCCt           >  1:1571902/1‑150 (MQ=255)                                                                                                                                           gTAATGAGGC‑‑‑TGTACAGCGgcctcattactggcaggccaaaaaaaagctgccatcacgcaatggcagccaggtcgagcacttacgcaacagttgaggcaaatcttctcaggcaattactacagaaatgttacaaggccacgacacgctag          <  2:2073188‑M2/150‑132 (MQ=255)                                                                                                                                             aaTGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTAAATCCCTCAGAGTGCAAATTCTCTCGCTGCTCGGCGGCAGTGTGCTGGCGATGCTGCTGATCGCCCTGGTGTGTTTCCAGTTCCTgtc        >  1:1218483/1‑150 (MQ=255)                                                                                                                                              aTGAGGC‑‑‑TGTACAGCGgcctcattactggcaggccaaaaaaaagctgccatcacgcaatggcagccaggtcgagcacttacgcaacagttgaggcaaatcttctcaggcaattactacagaaatgttacaaggccacgacacgctagccc       <  2:1948541‑M2/150‑135 (MQ=255)                                                                                                                                                gAGGC‑‑‑TGTACAGCGgcctcattactggcaggccaaaaaaaagctgccatcacgcaatggcagccaggtcgagcacttacgcaacagttgaggcaaatcttctcaggcaattactacagaaatgttacaaggccacgacacgctagcccgt     <  1:641629‑M2/150‑137 (MQ=255)                                                                                                                                                gAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTAAATCCCTCAGAGTGCAAATTCTCTCGCTGCTCGGCGGCAGTGTGCTGGCGATGCTGCTGATCGCCCTGGTGTGTTTCCAGTTCCTgtcgtc     <  1:1205410/150‑1 (MQ=255)                                                                                                                                                 aGGCcgctgtacagcctcattactggcaggccaaaaaaaagctgccatcacgcaatggcagccaggtcgagcacttacgcaacagttgaggcaaatcttctcaggcaattactacagaaatgttacaaggccatgacacgctagcccgtg       >  2:1347768‑M1/1‑4 (MQ=255)                                                                                                                                                  ggCctctgtacagcctcattactggcaggccaaaaaaaagctgccatcacgcaatggcagccaggtcgagcacttacgcaacagttgaggcaaatcttctcaggcaattactacagaaatgttacaaggccacgacacgctagcccgtgg      <  1:1697043‑M1/150‑148 (MQ=255)                                                                                                                                                  ggCcgctgtacagcctcattactggcaggccaaaaaaaagctgccatcacgcaatggcagccaggtcgagcacttacgcaacagttgaggcaaatcttctcaggcaattactacagaaatgttacaaggccacgacacgctagcccgtgg      >  1:1192936‑M1/1‑3 (MQ=255)                                                                                                                                                   gC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTAAATCCCTCAGAGTGCAAATTCTCTCGCTGCTCGGCGGCAGTGTGCTGGCGATGCTGCTGATCGCCCTGGTGTGTTTCCAGTTCCTGTCGTCCAg  >  2:769380/1‑150 (MQ=255)                                                                                                                                                    |                                                                                                                                                        CTGCAATTCACCACGGGCTAGCGTGTCGTGGCCTTGTAACATTTCTGTAGTAATTGCCTGAGAAGATTTGCCTCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTAAATCCCTCAGAGTGCAAATTCTCTCGCTGCTCGGCGGCAGTGTGCTGGCGATGCTGCTGATCGCCCTGGTGTGTTTCCAGTTCCTGTCGTCCAG  >  NC_002947/2418752‑2419047

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.