New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2418899	65 (0.730)	10 (0.120)	9/234	NT	13.8%	coding (7/1668 nt)	ctpH	methyl‑accepting chemotaxis protein CtpH
	?	NC_002947	= 2418908	63 (0.750)					coding (16/1668 nt)	ctpH	methyl‑accepting chemotaxis protein CtpH

CCACGGGCTAGCGTGTCGTGGCCTTGTAACATTTCTGTAGTAATTGCCTGAGAAGATTTGCCTCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTAAATCCCTCAGAGTGCAAATTCTCTCGCTGCTCGGCGGCAGTGTGCTGGCGATGCTGCTGATCGCCCTGGTGTGTTTCCAGTTCCTGTCGTCCAGCGTGCGT  >  NC_002947/2418762‑2419054                                                                                                                                                      |                                                                                                                                                   ccacGGGCTAGCGTGTCGTGGCCTTGTAACATTTCTGTAGTAATTGCCTGAGAAGATTTGCCTCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGgcc                                                                                                                                                 >  1:1192936‑M2/1‑147 (MQ=255) ccacGGGCTAGCGTGTCGTGGCCTTGTAACATTTCTGTAGTAATTGCCTGAGAAGATTTGCCTCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGAGgcc                                                                                                                                                 <  1:1697043‑M2/150‑4 (MQ=255)  cacGGGCTAGCGTGTCATGGCCTTGTAACATTTCTGTAGTAATTGCCTGAGAAGATTTGCCTCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGgcct                                                                                                                                                >  2:1347768‑M2/1‑146 (MQ=255)      ggCTAGCGTGTCGTGGCCTTGTAACATTTCTGTAGTAATTGCCTGAGAAGATTTGCCTCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGc                                                                                                                                            <  2:1916869/150‑1 (MQ=255)       gCTAGCGTGTCGTGGCCTTGTAACATTTCTGTAGTAATTGCCTGAGAAGATTTGCCTCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGcc                                                                                                                                           >  1:1631840/1‑150 (MQ=255)         tAGCGTGTCGTGGCCTTGTAACATTTCTGTAGTAATTGCCTGAGAAGATTTGCCTCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTa                                                                                                                                         >  1:1639187/1‑150 (MQ=255)                tCGTGGCCTTGTAACATTTCTGTAGTAATTGCCTGAGAAGATTTGCCTCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCctc                                                                                                                                  <  2:1631840/150‑1 (MQ=255)                  gTGGCCTTGTAACATTTCTGTAGTAATTGCCTGAGAAGATTTGCCTCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTg                                                                                                                                >  1:1319812/1‑150 (MQ=255)                     gCCTTGTAACATTTCTGTAGTAATTGCCTGAGAAGATTTGCCTCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGtt                                                                                                                             >  1:1617678/1‑150 (MQ=255)                          gTAACATTTCTTTAGTAATTGCCTGAGAAGATTTGCCTCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGACAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCgag                                                                                                                        <  1:1014644/150‑1 (MQ=255)                          gTAACATTTCTGTAGTAATTGCCTGAGAAGATTTGCCTCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCgag                                                                                                                        >  1:490073/1‑150 (MQ=255)                           tAACATTTCTGTAGTAATTGCCTGAGAAGATTTGCCTCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTAAAGTGGCTTCAGCCTATTCCCTCTTTTACCgaga                                                                                                                       >  2:749810/1‑150 (MQ=255)                               aTTTCTGTAGTAATTGCCTGAGAAGATTTGCCTCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGTC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCt                                                                                                                   >  1:2068597/1‑150 (MQ=255)                                tttCTGTAGTAATTGCCTGAGAAGATTTGCCTCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTc                                                                                                                  >  1:1751017/1‑150 (MQ=255)                                     gtagtaATTGCCTGAGAAGATTTGCCTCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGt                                                                                                             >  2:288609/1‑150 (MQ=255)                                      tagtaATTGCCTGAGAAGATTTGCCTCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGACCTCAGCCTACTCCCTCTGGTTCCGAGGCCCTCGATGtt                                                                                                            >  1:2066027/1‑150 (MQ=255)                                           aTTGCCTGAGAAGATTTGCCTCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTa                                                                                                       <  2:2066027/150‑1 (MQ=255)                                               ccTGAGAAGATTTGCCTCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTAAATc                                                                                                   >  1:1482720/1‑150 (MQ=255)                                                cTGAGAAGATTTGCCTCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGc                                                                                                          >  1:1058317/1‑142 (MQ=255)                                                cTGAGAAGATTTGCCTCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGc                                                                                                          <  2:1058317/142‑1 (MQ=255)                                                 tGAGAAGATTTGCCTCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTAAATccc                                                                                                 >  2:2057489/1‑150 (MQ=255)                                                   agaagaTTTGCCTCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCctc                                                                                                                                  <  2:811584/115‑1 (MQ=255)                                                   agaagaTTTGCCTCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCctc                                                                                                                                  >  1:811584/1‑115 (MQ=255)                                                    gaagaTTTGCCTCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTAAATCCCTCa                                                                                              <  2:2134111/150‑1 (MQ=255)                                                    gaagaTTTGCCTCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTAAATCCCTCa                                                                                              <  2:1639187/150‑1 (MQ=255)                                                      agaTTTGCCTCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTAAATCCCTCaga                                                                                            <  2:1751017/150‑1 (MQ=255)                                                      agaTTTGCCTCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTAAATCCCTCaga                                                                                            <  1:114244/150‑1 (MQ=255)                                                      agaTTTGCCTCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTAAATCCCTCaga                                                                                            <  1:288609/150‑1 (MQ=255)                                                              cTCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTAAATCCCTCAGAGTGCAAAt                                                                                    <  2:1482720/150‑1 (MQ=255)                                                               tCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGCCGCTGTACAGCtcattactggcag                                                                                                                                        <  1:1410801‑M2/101‑14 (MQ=255)                                                               tCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGCCGCTGTACAGCtcattactggcag                                                                                                                                        >  2:1410801‑M2/1‑88 (MQ=255)                                                               tCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTAAATCCCt                                                                                                <  1:1393013/137‑1 (MQ=255)                                                               tCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTAAATCCCt                                                                                                >  2:1393013/1‑137 (MQ=255)                                                                  aCTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTAAACCCCTCAGAGTGCAAATtctc                                                                                <  1:1550389/150‑1 (MQ=255)                                                                   cTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTAAATCCCTCAGAGTGCAAATtctct                                                                               <  1:1433766/150‑1 (MQ=255)                                                                   cTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTGTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTAAATCCCTCAGAGTGCAAATtctct                                                                               <  2:1617678/150‑1 (MQ=255)                                                                        gCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTAc                                                                                                                                        >  2:2311543/1‑88 (MQ=255)                                                                        gCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTAc                                                                                                                                        <  1:2311543/88‑1 (MQ=255)                                                                         cGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTAAATCCCTCAGAGTGCAAATTCTCTCgctgc                                                                         >  2:576134/1‑150 (MQ=255)                                                                                  tCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTAAATCCCTCAGAGTGCAAATTCTCTCGCTGCTCggcggcc                                                                >  1:1025993/1‑149 (MQ=255)                                                                                  tCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTAAATCCCTCAGAGTGCAAATTCTCTCGCTGCTCGGCGGCa                                                                >  1:2360778/1‑150 (MQ=255)                                                                                  tCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTAAATCCCTCAGAGTGAAAATTCTCTCGCTGCTCGGCGGCa                                                                >  2:497136/1‑150 (MQ=255)                                                                                  tCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCGACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTAAATCCCTCAGAGTGCAAATTCTCTCGCTGCTCGGCGGCa                                                                <  1:2057017/150‑1 (MQ=255)                                                                                    gACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGGAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTAAATCCCTCAGAGTGCAAATTCTCTCGCTGCTCGGCGGCAgt                                                              >  1:2001468/1‑150 (MQ=255)                                                                                      ccTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTAAATCCCTCAGAGTGCAAATTCTCTCGCTGCTCGGCGGCAgtgt                                                            >  1:2374022/1‑150 (MQ=255)                                                                                            tGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTAAATCCCTCAGAGTGCAAATTCTCTCGCTGCTCGGCGGCAGTGTGCTGGc                                                      <  2:1319812/150‑1 (MQ=255)                                                                                              ccATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTAAATCCCTCAGAGTGCAAATTCTCTCGCTGCTCGGCTGCAGTGTGCTGGCGa                                                    >  1:2356536/1‑150 (MQ=255)                                                                                              ccATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTAAATCCCTCAGAGTGCAAATTCTCTCGCTGCTCGGCGGCAGTGTGCTGGCGa                                                    >  1:332479/1‑150 (MQ=255)                                                                                              ccATTGCGTGATGGCAGCTTTTTTTTATCCTGCCAGTAATGAGGC‑‑‑TGTACACCGGCCTCAGCCTACTCCCGCTGTTTCAGAGTCCCTCGATGTTGCGTGATTCTCTCAGTGTGCAAATTCTCTCGCTCATCGGCGGCAGTGTGCTGGCGa                                                    <  2:1039883/150‑1 (MQ=255)                                                                                               cATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGc                                                                                                                                            <  2:620704/61‑1 (MQ=255)                                                                                               cATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGc                                                                                                                                            >  1:620704/1‑61 (MQ=255)                                                                                                   gCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGATACCCTCGATGTTGCGTAAATCCCTCAGAGTGCAAATTCTCTCGCTGCTCGGCGGCAGTGTGCTGGCGAtgctg                                               <  2:2374022/150‑1 (MQ=255)                                                                                                     gTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTAAATCCCTCAGAGTGCAAATtctct                                                                               >  2:1958977/1‑116 (MQ=255)                                                                                                     gTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTAAATCCCTCAGAGTGCAAATtctct                                                                               <  1:1958977/116‑1 (MQ=255)                                                                                                           gCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGtt                                                                                                            >  1:334804/1‑81 (MQ=255)                                                                                                           gCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGtt                                                                                                            <  2:334804/81‑1 (MQ=255)                                                                                                             aGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTAAATCCCTCAGAGTGCAAATTCTCTCGCTGCTCGGCGGCAGTGTGCTGGCGATGCTGCTGATCGccc                                     >  1:904849/1‑150 (MQ=255)                                                                                                                      ttGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTAAATCCCTCAGAGTGCAAATTCTCTCGCTGCTCGGCGGCAGTGTGCTGGCGATGCTGCTGATCGCCCTGGTGTGtt                            <  2:2377734/150‑1 (MQ=255)                                                                                                                        ggCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTAAATCCCTCAGAGTGCAAATTCTCTCGCTGCTCGGCGGCAGTGTGCTGGCGATGCTGCTGATCGCCCTGGTGTGTTTc                          <  2:490073/150‑1 (MQ=255)                                                                                                                         gCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTAAATCCCTCAGAGTGCAAATTCTCTCGCTGCTCGGCGGCAGTGTGCTGGCGATGCTGCTGATCGCCCTGGTGTGTTTcc                         >  2:1407455/1‑150 (MQ=255)                                                                                                                          ccTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTAAATCCCTCAGAGTGCAAATTCTCTCGCTGCTCGGCGGCAGTGTGCTGGCGATGCTGCTGATCGCCCTGGTGTGTTTCCa                        <  1:749810/150‑1 (MQ=255)                                                                                                                           cTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTAAATCCCTCAGAGTGCAAATtctctc                                                                              >  2:1693095/1‑95 (MQ=255)                                                                                                                           cTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTAAATCCCTCAGAGTGCAAATtctctc                                                                              <  1:1693095/95‑1 (MQ=255)                                                                                                                              ccAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTAAATCCCTCAGAGTGCAAATTCTCTCGCTGCTCGGCGGCAGTGTGCTGGCGATGCTGCTGATCGCCCTGGTGTGTTTCCAGTTc                    <  2:904849/150‑1 (MQ=255)                                                                                                                              ccAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTAAATCCCTCAGAGTGCAAATTCTCTCGCTGCTCGGCGGCAGTGTGCTGGCGATGCTGCTGATCGCCCTGGTGTGTTTCCAGTTc                    >  2:107184/1‑150 (MQ=255)                                                                                                                              ccAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTAAATCCCTCAGAGTGCAAATTCTCTCGCTGCTCGGCGGCAGTGTGCTGGCGATGCTGCTGATCGCCCTGGTGTGTTTCCAGTTc                    >  1:1422310/1‑150 (MQ=255)                                                                                                                               cAGTAATGAGGC‑‑‑TGTACAGCGgcctcattactggcaggccaaaaaaaagctgccatcacgcaatggcagccaggtcgagcacttacgcaacagttgaggcaaatcttctcaggcaattactacag                                            <  2:1629568‑M2/125‑105 (MQ=255)                                                                                                                               cAGTAATGAGGC‑‑‑TGTACAGCGgcctcattactggcaggccaaaaaaaagctgccatcacgcaatggcagccaggtcgagcacttacgcaacagttgaggcaaatcttctcaggcaattactacag                                            >  1:1629568‑M2/1‑21 (MQ=255)                                                                                                                               cAGTAATGAGGC‑‑‑TGTACAGCGgcctcattactggcaggccaaaaaaaagctgccatcacgcaatggcagccaggtcgagcacttacgcaa                                                                               >  1:979262‑M2/1‑21 (MQ=255)                                                                                                                               cAGTAATGAGGC‑‑‑TGTACAGCGgcctcattactggcaggccaaaaaaaagctgccatcacgcaatggcagccaggtcgagcacttacgcaa                                                                               <  2:979262‑M2/90‑70 (MQ=255)                                                                                                                                aGTAATGAGGC‑‑‑TGTACAGCGgcctcattactggcaggccaaaaaaaagctgccatcacgcaatggcagccaggtcgagcacttacgcaacagttgaggcaaatcttctcaggcaattactacagaaatgttacaaggcccgggcacgcta                  <  1:1910069‑M2/150‑131 (MQ=255)                                                                                                                                aGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTAAATCCCTCAGAGTGCAAATTCTCTCGCTGCTCGGCGGCAGTGTGCTGGCGATGCTGCTGATCGCCCTGGTGTGTTTCCAGTTCCt                  >  1:1571902/1‑150 (MQ=255)                                                                                                                                 gTAATGAGGC‑‑‑TGTACAGCGgcctcattactggcaggccaaaaaaaagctgccatcacgcaatggcagccaggtcgagcacttacgcaacagttgaggcaaatcttctcaggcaattactacagaaatgttacaaggccacgacacgctag                 <  2:2073188‑M2/150‑132 (MQ=255)                                                                                                                                   aaTGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTAAATCCCTCAGAGTGCAAATTCTCTCGCTGCTCGGCGGCAGTGTGCTGGCGATGCTGCTGATCGCCCTGGTGTGTTTCCAGTTCCTgtc               >  1:1218483/1‑150 (MQ=255)                                                                                                                                    aTGAGGC‑‑‑TGTACAGCGgcctcattactggcaggccaaaaaaaagctgccatcacgcaatggcagccaggtcgagcacttacgcaacagttgaggcaaatcttctcaggcaattactacagaaatgttacaaggccacgacacgctagccc              <  2:1948541‑M2/150‑135 (MQ=255)                                                                                                                                      gAGGC‑‑‑TGTACAGCGgcctcattactggcaggccaaaaaaaagctgccatcacgcaatggcagccaggtcgagcacttacgcaacagttgaggcaaatcttctcaggcaattactacagaaatgttacaaggccacgacacgctagcccgt            <  1:641629‑M2/150‑137 (MQ=255)                                                                                                                                      gAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTAAATCCCTCAGAGTGCAAATTCTCTCGCTGCTCGGCGGCAGTGTGCTGGCGATGCTGCTGATCGCCCTGGTGTGTTTCCAGTTCCTgtcgtc            <  1:1205410/150‑1 (MQ=255)                                                                                                                                         gC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTAAATCCCTCAGAGTGCAAATTCTCTCGCTGCTCGGCGGCAGTGTGCTGGCGATGCTGCTGATCGCCCTGGTGTGTTTCCAGTTCCTGTCGTCCAg         >  2:769380/1‑150 (MQ=255)                                                                                                                                              tGTACAGCGGCCTCAGCCTACTCCCTCTGGATCCGAGACCCTCGATGTTGCGTAAATCCCTCAGAGTGc                                                                                        >  1:1874467/1‑69 (MQ=255)                                                                                                                                              tGTACAGCGGCCTCAGCCTACTCCCTCTGGATCCGAGACCCTCGATGTTGCGTAAATCCCTCAGAGTGc                                                                                        <  2:1874467/69‑1 (MQ=255)                                                                                                                                               gTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTAAATCCCTCAGAGTGCAAATTCTCTCGCTGCTCGGCGGCAGTGTGCTGGCGATGCTGCTGATCGCCCTGGTGTGTTTCCAGTTCCTGTCGTCCAgcgt      >  1:10769/1‑150 (MQ=255)                                                                                                                                                  cAGCGgcctcattactggcaggccaaaaaaaagctgccatcacgcaatggcagccaggtcgagcacttacgcaacagttgaggcaaatcttctcaggcaattactacagaaatgttacaaggccacgacacgctagcccgtggtgaattg   >  2:641629‑M2/1‑5 (MQ=255)                                                                                                                                                   aGCGGCCTCAGCCTACTCCCGTTGTTTCCGAGACCCTCTATGTTGCGTAAATCCCTCAGAGGTCAAATTCTCTCGCTGCTCGGCGGCAGTGTGCTGGCGATTCTGCTGATCTCCCTGGTGTGTTTCCAGTTCCTGTCGTCCAgcgttcgt  <  2:1697043/150‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                                   CCACGGGCTAGCGTGTCGTGGCCTTGTAACATTTCTGTAGTAATTGCCTGAGAAGATTTGCCTCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGC‑‑‑TGTACAGCGGCCTCAGCCTACTCCCTCTGGTTCCGAGACCCTCGATGTTGCGTAAATCCCTCAGAGTGCAAATTCTCTCGCTGCTCGGCGGCAGTGTGCTGGCGATGCTGCTGATCGCCCTGGTGTGTTTCCAGTTCCTGTCGTCCAGCGTGCGT  >  NC_002947/2418762‑2419054

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.