New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 3264121 =101 (1.140)7 (0.080) 7/236 NT 7.0% coding (469/1635 nt) PP_2861 methyl‑accepting chemotaxis transducer
?NC_002947 3264139 = 90 (1.060)coding (451/1635 nt) PP_2861 methyl‑accepting chemotaxis transducer

Only 100 of 118 total aligned reads displayed.

CAGCGCCATCAGCAGGGCAATGCCCACGCCAACCAGCGAAGCGTCGCGCAACTGGCGAGCGAATTCGGCCTGTACGTCATCGACGTACACGCCCGAACCGATGATCCAGCCCCACGGCTTGAACAGCTGAATATACGAGGTCTTGGCTACCGGCTCACTGGCGCCGGGCTTGGGCCAGCGATAGTTGACCGGGCCGGCGTCCTGCTGGCGGGCGAGGGCGACCATTTCGTTGAACACGGCGAAACCATCGGGGTCGCGGATGGCGGAAAGGTCCTGGTCGTCGAGCTTGGGGTTGGC  >  NC_002947/3263972‑3264268
                                                                                                                                                     |                                                                                                                                                   
gaagatgatcatgcatccggccaaccccaagctcgacgaccaggacctttccgccatccgcgaccccgatggtttcgccgtgttcaacgaaatggtcgccctcgcccgccagcaggacgccggcccggtcaactatcgctggcccaagcc                                                                                                                                                     <  1:192122‑M1/1‑1 (MQ=255)
caGCGCCATCAGCAGGGCAATGCCCACGCCAACCAGCGAAGCGTCGCGCAACTGGCGAGCGAATTCGGCCTGTACGTCATCGACGTACACGCCCGAACCGATGATCCAGCCCCACGGCTTGAACAGCTGAATATACGAGGTCTTGGCTAc                                                                                                                                                     <  1:489397/150‑1 (MQ=255)
 aagatgatcatgcatccggccaaccccaagctcgacgaccaggacctttccgccatccgcgaccccgatggtttcgccgtgttcaacgaaatggtcgccctcgcccgccagcaggacgccggcccggtcaactatcgctggcccaagccc                                                                                                                                                    >  1:1626931‑M1/149‑150 (MQ=255)
            cagGGCAATGCCCACGCCAACCAGCGAAGCGTCGCGCAACTGGCGAGCGAATTCGGCCTGTACGTCATCGACGTACACGCCCGAACCGATGATCCAGCCCCACGGCTTGAACAGCTGAATATACGAGGTCTTGGCTACCGGCTCACTGgc                                                                                                                                         >  1:1075899/1‑150 (MQ=255)
                gCAATGCCCACGCCAACCAGCGAAGCGTTGCGGAACTGGCGAGCGAATTCGGCCTGTACGTCATCGACGTACACGCCCGAACCGATGATCCAGCCCCACGGCTTGAACAGCTGAATATACGAGGTCTTGGCTACCGGCTCACTGgcgcgt                                                                                                                                     <  2:610967/150‑3 (MQ=255)
                ccggccaaccccaagctcgacgaccaggacctttccgccatccgcgaccccgatggtttcgccgtgttcaacgaaatggtcgccctcgcccgccagcaggacgccggcccggtcaactatcgctggcccaagcCCGGCTCACTGGCGCCg                                                                                                                                     >  2:1973975‑M1/134‑150 (MQ=255)
                 cAATGCCCACGCCAACCAGCGAAGCGTCGCGCAACTGGCGAGCGAATTCGGCCTGTACGTCATCGACGTACACGCCCGAACCGATGATCCAGCCCCACGGCTTGAACAGCTGAATATACGAGGTCTTGGCTACCGGCTCACTGGCGCCgg                                                                                                                                    <  1:75094/150‑1 (MQ=255)
                  aaTGCCCACGCCAACCAGCGAAGCGTCGCGCAACTGGCGAGCGAATTCGGCCTGTACGTCATCGACGTACACGCCCGAACCGATGATCCAGCCCCACGGCTTGAACAGCTGAATATACGAGGTCTTGGCTACCGGCTCACTGGCGCCggg                                                                                                                                   >  1:745295/1‑150 (MQ=255)
                   gccaaccccaagctcgacgaccaggacctttccgccatccgcgaccccgatggtttcgccgtgttcaacgaaatggtcgccctcgcccgccagcaggacgccggcccggtcaactatcgctggcccaagcCCGGCCCACTGGCGCCGGGc                                                                                                                                  >  1:642144‑M1/131‑150 (MQ=255)
                   gccaaccccaagctcgacgaccaggacctttccgccatccgcgaccccgatggtttcgccgtgttcaacgaaatggtcgccctcgcccgccagcaggacgccggcccggtcaactatcgctggcccaagcCCGGCCCACTGGCGCCGGGc                                                                                                                                  <  2:642144‑M1/20‑1 (MQ=255)
                   aTGCCCACGCCAACCAGCGAAGCGTCGCGCAACTGGCGAGCGAATTCGGCCTGTACGTCATCGACGTACACGCCCGAACCGATGATCCAGCCCCACGGCTTGAACAGCTGAATATACGAGGTCTTGGCTACCGGCTCACTGGCGCCGGGc                                                                                                                                  <  2:1746415/150‑1 (MQ=255)
                      cccACGCCAACCAGCGAAGCGTCGCGCAACTGGCGAGCGAATTCGGCCTGTACGTCATCGACGTACACGCCCGAACCGATGATCCAGCCCCACGGCTTGAACAGCTGAATATACGAGGTCTTGGCTACCGGCTCACTGGCGCCGGGCTTg                                                                                                                               <  2:1904693/150‑1 (MQ=255)
                      cccACGCCAACCAGCGAAGCGTCGCGCAACTGGCGAGCGAATTCGGCCTGTACGTCATCGACGTACACGCCCGAACCGATGATCCAGCCCCACGGCTTGAACAGCTGAATATACGAGGTCTTGGCTACCGGCTCACTGGCGCCGGGCTTg                                                                                                                               <  2:1075899/150‑1 (MQ=255)
                       ccACGCCAACCAGCGAAGCGTCGCGCAACTGGCGAGCGAATTCGGCCTGTACGTCATCGCCGTACACGCCCGAACCGATGATCCAGCCCCACGGCTTGAACAGCTGAATATACGAGGTCTTGGCTACCGGCTCACTGGCGCCGGGCTTgg                                                                                                                              >  1:1959887/1‑150 (MQ=255)
                       ccACGCCAACCAGCGAAGCGTCGCGCAACTGGCGAGCGAATTCGGCCTGTACGTCATCGACGTACACGCCCGAACCGATGATCCAGCCCCACGGCTTGAACAGCTGAATATACGAGGTCTTGGCTAc                                                                                                                                                     <  1:1343854/127‑1 (MQ=255)
                       ccACGCCAACCAGCGAAGCGTCGCGCAACTGGCGAGCGAATTCGGCCTGTACGTCATCGACGTACACGCCCGAACCGATGATCCAGCCCCACGGCTTGAACAGCTGAATATACGAGGTATTGGCTAc                                                                                                                                                     >  2:1343854/1‑127 (MQ=255)
                         aCGCCAACCAGCGAAGCGTCGCGCAACTGGCGAGCGAATTCGGCCTGTACGTCATCGACGTACACGCCCGAACCGATGATCCAGCCCCACGGCTTGAACAGCTGAATATACGAGGTCTTGGCTACCGGCTCACTGGCGCCGGGCTTggg                                                                                                                             <  1:1426983/149‑1 (MQ=255)
                         aCGCCAACCAGCGAAGCGTCGCGCAACTGGCGAGCGAATTCGGCCTGTACGTCATCGACGTACACGCCCGAACCGATGATCCAGCCCCACGGCTTGAACAGCTGAATATACGAGGTCTTGGCTACCGGCTCACTGGCGCCGGGCTTggg                                                                                                                             >  2:1426983/1‑149 (MQ=255)
                         aCGCCAACCAGCGAAGCGTCGCGCAACTGGCGAGCGAATTCGGCCTGTACGTCATCGACGTACACGCCCGAACCGATGATCCAGCCCCACGGCTTGAACAGCTGAATATACGAGGTCTTGGCTACCGGCTCACTGGCGCCGGGCTTGGGc                                                                                                                            >  1:1283252/1‑150 (MQ=255)
                           gCCAACCAGCGAAGCGTCGCGCAACTGGCGAGCGAATTCGGCCTGTACGTCATCGACGTACACGCCCGAACCGATGATCCAGCCCCACGGCTTGAACAGCTGAATATACGAGGTCTTGGCTACCGGCTCACTGGCGCCGGGCTTGGGCCa                                                                                                                          <  2:1142718/150‑1 (MQ=255)
                                 ccgggAAGCGTCGCGCAACTTTCGAGCGAATTCGGCCTGTACGTCATCGACGTACACGCCCGAACCGATGATCCAGCCCCACGGCTTGAACAGCTGAATATACGAGGTCTTGGCTACCGGCTCACTGGCGCCGGGCTTGGGCCAGCGATa                                                                                                                    <  2:1221615/146‑1 (MQ=255)
                                  aGCGAAGCGTCGCGCAACTGGCGAGCGAATTCGGCCTGTACGTCATCGACGTACACGCCCGAACCGATGATCCAGCCCCACGGCTTGAACAGCTGAATATACGAGGTCTTGGCTACCGGCTCACTGGCGCCGGGCTTGGGCCAGCGATAg                                                                                                                   >  2:938840/1‑150 (MQ=255)
                                    cGAAGCGTCGCGCAACTGGCGAGCGAATTCGGCCTGTACGTCATCGACGTACACGCCCGAACCGATGATCCAGCCCCACGGCTTGAACAGCTGAATATACGAGGTCTTGGCTACCGGCTCACTGGCGCCGGGCTTGGGCCAGCGATAGtt                                                                                                                 <  2:534528/150‑1 (MQ=255)
                                      aaGCGTCGCGCAACTGGCGAGCGAATTCGGCCTGTACGTCATCGACGTACACGCCCGAACCGATGATCCAGCCCCACGGCTTGAACAGCTGAATATACGAGGTCTTGGCTAGCGGCTCACTGGCGCCGGGCTTGGGCCAGCGATAGTTGa                                                                                                               >  1:261995/1‑150 (MQ=255)
                                         cGTCGCGCAACTGGCGAGCTAATTCGGCCTGTACGTCATCGACGTACACGCCCGAACCGATGATCCAGCCCCACGGCTTGAACAGCTGAATATACGAGGTCTTGGCTACCGGCTCACTGGCGCCGGGCTTGGGCCAGCGATAGTTGACCg                                                                                                            <  2:1582133/150‑1 (MQ=255)
                                         cGTCGCGCAACTGGCGAGCGAATTCGGCCTGTACGTCATCGACGTACACGCCCGAACCGATGATCCAGCCCCACGGCTTGAACAGCTGAATATACGAGGTCTTGGCTACCGGCTCACTGGCGCCGGGCTTGGGCCAGCGATAGTTGACCg                                                                                                            >  1:1582133/1‑150 (MQ=255)
                                            cgcgCAACTGGCGAGCGAATTCGGCCTGTACGTCATCGACGTACACGCCCGAACCGATGATCCAGCCCCACGGCTTGAACAGCTGAATATACGATGTCTTGGCTACCGGCTCACTGGCGCCGGGCTTGGGCCAGCGATAGTTGACCGGGc                                                                                                         <  1:1034076/150‑1 (MQ=255)
                                                cAACTGGCGAGCGAATTCGGCCTGTACGTCATCGACGTACACGCCCGAACCGATGATCCAGCCCCACGGCTTGAACAGCTGAATATACGAGGTCTTGGCTACCGGCTCACTGGCGCCGGGCTTGGGCCAGCGATAGTTGACCGGGCCGGc                                                                                                     <  2:745295/150‑1 (MQ=255)
                                                cAACTGGCGAGCGAATTCGGCCTGTACGTCATCGACGTACACGCCCGAACCGATGATCCAGCCCCACGGCTTGAACAGCCGAATATACGAGGTCTTGGCTACCGGCTCACTGGCGCCGGGCTTGGGCCAGCGATAGTTGACCGGGCCGGc                                                                                                     <  1:1139600/150‑1 (MQ=255)
                                                    tGGCGAGCGAATTCGGCCTGTACGTCATCGACGTACACGCCCGAACCGATGATCCAGCCCCACGGCTTGAACAGCTGAATATACGAGGTCTTGGCTACCGGCTCACTGGCGCCGGGCTTGGGCCAGCGATAGTTGACCGGGCCGGCGTcc                                                                                                 >  1:1013198/1‑150 (MQ=255)
                                                      gcgagcgaATTCGGCCTGTACGTCATCGACGTACACGCCCGAACCGATGATCCAGCCCCACGGCTTGAACAGCTGAATATACGAGGTCTTGGCTACCGGCTCACTGGCGCCGGGCTTGGGCCAGCGATAGTTGACCGGGCCGGCGTCctg                                                                                               <  1:938840/150‑1 (MQ=255)
                                                        gagcgaATTCGGCCTGTACGTCATCGACGTACACGCCCGAACCGATGATCCAGCCCCACGGCTTGAACAGCTGAATATACGAGGTCTTGGCTACCGGCTCACTGGCGCCGGGCTTGGGCCAGCGATAGTTGACCg                                                                                                            >  2:945529/1‑135 (MQ=255)
                                                        gagcgaATTCGGCCTGTACGTCATCGACGTACACGCCCGAACCGATGATCCAGCCCCACGGCTTGAACAGCTGAATATACGAGGTCTTGGCTACCGGCTCACTGGCGCCGGGCTTGGGCCAGCGATAGTTGACCg                                                                                                            <  1:945529/135‑1 (MQ=255)
                                                         agcgaATTCGGCCTGTACGTCATCGACGTACACGCCCGAACCGATGATCCAGCCCCACGGCTTGAACAGCTGAATATACGAGGTCTTGGCTACCGGCTCACTGGCGCCGGGCTTGGGCCAGCGATAGTTGACCGGGCCGGCGTCctgctg                                                                                            >  2:1256765/1‑150 (MQ=255)
                                                          gcgaATTCGGCCTGTACGTCATCGACGTACACGCCCGAACCGATGATCCAGCCCCACGGCTTGAACAGCTGAATATACGAGGTCTTGGCTACCGGCTCACTGGCGCCGGGCTTGGGCCAGCGATAGTTGAc                                                                                                              >  2:1913802/1‑131 (MQ=255)
                                                          gcgaATTCGGCCTGTACGTCATCGACGTACACGCCCGAACCGATGATCCAGCCCCACGGCTTGAACAGCTGAATATACGAGGTCTTGGCTACCGGCTCACTGGCGCCGGGCTTGGGCCAGCGATAGTTGAc                                                                                                              <  1:1913802/131‑1 (MQ=255)
                                                           cgaATTCGGCCTGTACGTCATCGACGTACACGCCCGAACCGATGATCCAGCCCCACGGCTTGAACAGCTGAATATACGAGGTCTTGGCTACCGGCTCACt                                                                                                                                            >  2:1875718/1‑100 (MQ=255)
                                                           cgaATTCGGCCTGTACGTCATCGACGTACACGCCCGAACCGATGATCCAGCCCCACGGCTTGAACAGCTGAATATACGAGGTCTTGGCTACCGGCTCACt                                                                                                                                            <  1:1875718/100‑1 (MQ=255)
                                                           cgaATTCGGCCTGTACGTCATCGACGTACACGCCCGAACCGATGATCCAGCCCCACGGCTTGAACAGCTGAATATACGAGGTCTTGGCTACCGGCTCACTGGCGCCGGGCTTGGGCCAGCGATAGTTGACCGGGCCGGCGTCCTGATgga                                                                                          <  1:1069521/150‑2 (MQ=255)
                                                               ttCGGCCTGTACGTCATCGACGTACACGCCCGAACCGATGATCCAGCCCCACGGCTTGAACAGCTGAATATACGAGGTCTTGGCTACCGGCTCACTGGCGCCGGGCTTggg                                                                                                                             <  2:82552/111‑1 (MQ=255)
                                                               ttCGGCCTGTACGTCATCGACGTACACGCCCGAACCGATGATCCAGCCCCACGGCTTGAACAGCTGAATATACGAGGTCTTGGCTACCGGCTCACTGGCGCCGGGCTTggg                                                                                                                             >  1:82552/1‑111 (MQ=255)
                                                                  ggacTGTACGTCATCGACGTACACGCCCGAACCGATGATCCAGCCCCACGGCTTGAACAGCTGAATATACGAGGTCTTGGCTACCGGCTCACTGGCGCCGGGCTTGGGCCAGCGATCGTTGACCGGGCCGGCGTCCTGCTGGCgggcgag                                                                                   >  1:1844131/4‑150 (MQ=255)
                                                                   gCCTGTACGTCATCGACGTACACGCCCGAACCGATGATCCAGCCCCACGGCTTGAAGACCTGAATATGCGAGTTCTTGGCTACCGGCTCACTGGCGCCGGGCTTGGGCCAGCGATAGTTGACCGGGCCGGCGTCCTGCTGGCgggcgagg                                                                                  <  1:2349335/150‑1 (MQ=255)
                                                                   gCCTGTACGTCATCGACGTACACGCCCGAACCGATGATCCAGCCCCACGGCTTGAACAGCTGAATATACGAGGTCTTGGCTACCGGCTCACTGGCGCCGGGCTTGGGCCAGCGATAGTTGACCGGGCCGGCGTCCTGCTGGCgggcgagg                                                                                  <  1:768821/150‑1 (MQ=255)
                                                                   gCCTGTACGTCATCGACGTACACGCCCGAACCGATGATCCAGCCCCACGGCTTGAACAGCTGAATATACGAGGTCTTGGCTACCGGCTCACTGGCGCCGGGCTTGGGCCAGCGATAGTTGACCGGGCCGGCGTCCTGCTGGCgggcgagg                                                                                  <  1:1914939/150‑1 (MQ=255)
                                                                        tACGTCATCGACGTACACGCCCGAACCGATGATCCAGCCCCACGGCTTGAACAGCTGAATATACGAGGTCTTGGCTACCGGCTCACTGGCGCCGGGCTTGGGCCAGCGATAGTTGACCGGGCCGGCGTCCTGCTGGCGGGCGAGGGCGAc                                                                             >  1:1278230/1‑150 (MQ=255)
                                                                           gTCATCGACGTACACGCCCGAACCGATGATCCAGCCCCACGGCTTGAACAGCTGAATATACGAGGTCTTGGCTACCGGCTCACTGGCGCCGGGCTTGGGCCAGCGATAGTTGACCGGGCCGGCGTCCTGCTGGCGGGCGAGGGCGACCAt                                                                          >  1:688451/1‑150 (MQ=255)
                                                                           gTCATCGACGTACACGCCCGAACCGATGATCCAGCCCCACGGCTTGAACAGCTGAATATACGAGGTCTTGGCTACCGGCTCACTGGCGCCGGGCTTGGGCCAGCGATAGTTGACCGGGCCGGCGTCCTGCTGGCGGGCGAGGGCGACCAt                                                                          >  2:1054835/1‑150 (MQ=255)
                                                                           gTCATCGACGTACACGCCCGAACCGATGATCCAGCCCCACGGCTTGAACAGCTGAATATACGAGGCCTTGGCTACCGGCt                                                                                                                                                <  2:519616/80‑1 (MQ=255)
                                                                           gTCATCGACGTACACGCCCGAACCGATGATCCAGCCCCACGGCTTGAACAGCTGAATATACGAGGCCTTGGCTACCGGCt                                                                                                                                                >  1:519616/1‑80 (MQ=255)
                                                                              aTCGACGTACACGCCCGAACCGATGATCCAGCCCCACGGCTTGAACAGCTGAATATACGAGGTCTTGGCTAcc                                                                                                                                                    <  2:71692/73‑1 (MQ=255)
                                                                              aTCGACGTACACGCCCGAACCGATGATCCAGCCCCACGGCTTGAACAGCTGAATATACGAGGTCTTGGCTAcc                                                                                                                                                    >  1:71692/1‑73 (MQ=255)
                                                                              aTCGACGTACACGCCCGAACCGATGATCCAGCCCCACGGCTTGAACAGCTGAATATACGAGGTCTTGGCTACCGGCTCACTGGCGCCGGGCTTGGGCCAGCGATAGTTGACCGGGCCGGCGTCCTGCTGGCGGGCGAGGGCGGCCATGTc                                                                       >  2:2351873/1‑150 (MQ=255)
                                                                              aTCGACGTACACGCCCGAACCGATGATCCAGCCCCACGGCTTGAACAGCTGAATATACGAGGTCTTGGCTACCGGCTCACTGGCGCCGGGCTTGGGCCAGCGATAGTTGACCGGGCCGGCGTCCTGCTGGCGGGCGAGGGCGACCAtttt                                                                       >  2:178098/1‑149 (MQ=255)
                                                                               tCGACGTACACGCCCGAACCGATGATCCAGCCCCACGGCTTGAACAGCTGAATATACGAGGTCTTGGCTACCGGCTCACTGGCGCCGGGCTTGGGCCAGCGATAGTTGACCGGGCCGGCGTCCTGCTGGCGGGCGAGGGCGACCATTTCg                                                                      <  1:986388/150‑1 (MQ=255)
                                                                                cGACGTACACGCCCGAACCGATGATCCAGCCCCACGGCTTGAACAGCTGAATATACGAGGTCTTGGCTACCGGCTCACTGGCGCCGGGCTTGGGCCAGCGATAGTTGACCGGGCCGGCGTCCTGCTGGCgggcgagggcga                                                                              <  1:61350/141‑1 (MQ=255)
                                                                                cGACGTACACGCCCGAACCGATGATCCAGCCCCACGGCTTGAACAGCTGAATATACGAGGTCTTGGCTACCGGCTCACTGGCGCCGGGCTTGGGCCAGCGATAGTTGACCGGGCCGGCGTCCTGCTGGCgggcgagggcga                                                                              >  2:61350/1‑141 (MQ=255)
                                                                                cGACGTACACGCCCGAACCGATGATCCAGCCCCACGGCTTGAACAGCTGAATATACGAGGTCTTGGCTACCGGCTCACTGGCGCCGGGCTTGGGCCAGCGATAGTTGACCGGGCCGGCGTCCTGCTGGCGGGCGAGGGCGACCATTTCGt                                                                     <  1:1594763/150‑1 (MQ=255)
                                                                                 gACGTACACGCCCGAACCGATGATCCAGCCCCACGGCTTGAACAGCTGAATATACGAGGTCTTGGCTACCGGCTCACTGGCGCCGGGCTTGGGCCAGCGATAGTTGACCGGGCCGGCGTCCTGCTGGCGGGCGAGGGCGACCATTTCGtt                                                                    <  2:2374887/150‑1 (MQ=255)
                                                                                   cGTACACGCCCGAACCGATGATCCAGCCCCACGGCTTGAACAGCTGAATATACGAGGTCTTGGCTACCGGCTCACTGGCGCCGGGCTTGGGCCAGCGATAGTTGACCGGGCCGGCGTCCTGCTGGCGGGCGAGGGCGACCATTTCGTTGa                                                                  <  1:617275/150‑1 (MQ=255)
                                                                                     aacgaaatggtcgccctcgcccgccagcaggacgccggcccggtcaactatcgctggcccaagcCCGGCTCACTGGCGCCGGGCTTgg                                                                                                                              <  2:1382174‑M1/24‑1 (MQ=255)
                                                                                     aacgaaatggtcgccctcgcccgccagcaggacgccggcccggtcaactatcgctggcccaagcCCGGCTCACTGGCGCCGGGCTTgg                                                                                                                              >  1:1382174‑M1/65‑88 (MQ=255)
                                                                                        acGCCCGAACCGATGATCCAGCCCCACGGCTTGAACAGCTGAATATACGAGGTCTTGGCTACCGGCTCACTGGCGCCGGGCTTGGGCCAGCGATAGTTGACCGGGCCGGCGTCctg                                                                                               <  2:2334025/116‑1 (MQ=255)
                                                                                        acGCCCGAACCGATGATCCAGCCCCACGGCTTGAACAGCTGAATATACGAGGTCTTGGCTACCGGCTCACTGGCGCCGGGCTTGGGCCAGCGATAGTTGACCGGGCCGGCGTCctg                                                                                               >  1:2334025/1‑116 (MQ=255)
                                                                                          gCCCGAACCGATGATCCAGCCCCACGGCTTGAACAGCTGAATATACGAGGTCTTGGCTACCGGCTCACTGGCGCCGGGCTTGGGCCAGCGATAGTTGACCGGGc                                                                                                         <  2:693172/104‑1 (MQ=255)
                                                                                              gAACCGATGATCCAGCCCCACGGCTTGAACAGCTGAATATACGAGGTCTTGGCTACCGGCTCACTGGCGCCGGGCTTGGGCCAGCGATAGTTGACCGGGCCGGCGTCCTGCTGGCGGGCGAGGGCGACCATTTCGTTGAACACGGCGaaa                                                       >  1:3919/1‑150 (MQ=255)
                                                                                               tcgccctcgcccgccagcaggacgccggcccggtcaactatcgctggcccaagcCCGGCTCACTGGCGCCGGGCTTg                                                                                                                               >  2:1315247‑M1/55‑77 (MQ=255)
                                                                                               tcgccctcgcccgccagcaggacgccggcccggtcaactatcgctggcccaagcCCGGCTCACTGGCGCCGGGCTTg                                                                                                                               <  1:1315247‑M1/23‑1 (MQ=255)
                                                                                                  cGATGATCCAGCCCCACGGCTTGAACAGCTGAATATACGAGGTCTTGGCTACCGGCTCACTGGCGCCGGGCTTGGGCCAGCGATAGtt                                                                                                                 <  1:227806/88‑1 (MQ=255)
                                                                                                  cGATGATCCAGCCCCACGGCTTGAACAGCTGAATATACGAGGTCTTGGCTACCGGCTCACTGGCGCCGGGCTTGGGCCAGCGATAGtt                                                                                                                 >  2:227806/1‑88 (MQ=255)
                                                                                                  cGATGATCCAGCCCCACGGCTTGAACAGCTGAATATACGAGGTCTTGGCTACCGGCTCACTGGCGCCGGGCTTGGGCCAGCGATAGTTGACCGGGCCGGCGTCCTGCTGGCGGGCGAGGGCGACCATTTCGTTGAACACGGCGAAACCAt                                                   >  1:743935/1‑150 (MQ=255)
                                                                                                   gatgatCCAGCCCCACGGCTTGAACAGCTGAATATACGAGGTCTTGGCTACCGGCTCACTGGCGCCGGGCTTGGGCCAGCGATAGTTGACCGGGCCGGCGTCCTGCTGGCGGGCGAGGGCGACCATTTCGTTGAACACGGCGAAACCATc                                                  <  2:1283252/150‑1 (MQ=255)
                                                                                                           aGCCCCACGGCTTGAACAGCTGAATATACGAGGTCTTGGCTACCGGCTCACTGGCGCCGGGCTTGGGCCAGCGATAGTTGACCGGGCCGGCGTCCTGCTGGCgggcgag                                                                                   >  2:2104317/1‑109 (MQ=255)
                                                                                                           aGCCCCACGGCTTGAACAGCTGAATATACGAGGTCTTGGCTACCGGCTCACTGGCGCCGGGCTTGGGCCAGCGATAGTTGACCGGGCCGGCGTCCTGCTGGCgggcgag                                                                                   <  1:2104317/109‑1 (MQ=255)
                                                                                                            gCCCCACGGCTTGAACAGCTGAATATACGAGGTCTTGGCTACCGGCTCACTGGCGCCGGGCTTGGGCCAGCGATAGTTGACCGGGCCGGCGTCCTGCTGGCGGGCGAGGGCGACCATTTCGTTGAACACGGCGAAACCATCGGGGTcgcg                                         >  2:399224/1‑150 (MQ=255)
                                                                                                                 aCGGCTTGAACAGCTGAATATACGAGGTCTTGGCTACCGGCTCACTGGCGCCGGGCTTGGGCCAGCGATAGTTGACCGGGCCGGCGTCCTGCTGGCGGGCGAGGGCGACCATTTCGTTGAACACGGCGAAACCATCGGGGTCGCGGATgg                                    >  1:453473/1‑150 (MQ=255)
                                                                                                                 aCGGCTTGAACAGCTGAATATACGAGGTCTTGGCTACCGGCTCACTGGCGCCGGGCTTGGGCCAGCGATAGTTGACCGGGCCGGCGTCCTGCTGGCGGGCGAGGGCGACCATTTCGTTGAACACGGCGAAACCATCGGGGTCGCGGATgg                                    <  2:688451/150‑1 (MQ=255)
                                                                                                                  cGGCTTGAACAGCTGAATATACGAGGTCCTGGCTACGGGCTCACTGGCGCCGGGCTTGGGCCAGCGATAGTTGACCGTGTCGGCGTCCTGCTGGCGGGCGAGGGCGACCATTTCGTTGAACACGGCGAAACCATCGGGGTCGCGGATGGc                                   <  2:1187770/150‑1 (MQ=255)
                                                                                                                   ggCTTGAACAGCTGAATATACGAGGTCTTGGCTACCGGCTCACTGGCGCCGGGCTTGGGCCAGCGATAGTTGACCGGGCCGGCGTCCTGCTGGCGGGCGAGGGCGACCATTTCGTTGAACACGGCGAAACCATCGGGGTCGCGGATGGCg                                  >  2:192122/1‑150 (MQ=255)
                                                                                                                   ggCTTGAACAGCTGAATATACGAGGTCTTGGCTACCGGCTCACTGGCGCCGGGCTTGGGCCAGCGATAGTTGACCGGGCCGGCGTCCTGCTGGCGGGCGAGGGCGACCATTTCGTTGAACACGGCGAAACCATCGGGGTCGCGGATGGCg                                  <  2:1953433/150‑1 (MQ=255)
                                                                                                                       tgcaCAGCTGACTATCCCAGCACTTCGCCACCGGCTCACTGGAGCCGGGCTTCGGCCAGCGCTCGTTGACCGGGCCGGCGTCCTGCTGGCGGGCGAGGGCGACCATTTCGTTTAACACTGCGAAACCATCGGGGTCGCGGATGGCGGaaa                              <  1:488553/147‑1 (MQ=255)
                                                                                                                       tGAACAGCTGAATATACGAGGTCTTGGCTACCGGCTCACTGGCGCCGGGCTTGGGCCAGCGATAGTTGACCGGGCCGGCGTCCTGCTGGCGGGCGAGGGCGACCATTTCGTGGAACACGGCGAAACCATCGGGGTCGCCGATGGCGGaca                              <  2:1844131/150‑3 (MQ=255)
                                                                                                                            aGCTGAATATACGAGGTCTTGGCTACCGGCTCACTGGCGCCGGGCTTGGGCGAGCGATAGTTGACCGGGCCGGCGTCCTGCTGGCGGGCGAGGGCGACCATTTCGGTGAACACGGCGAAACCATCGGGGTCGCGGAGGGCGGAAAGGGcc                         >  2:2144483/1‑150 (MQ=255)
                                                                                                                             gCTGAATATACGAGGTCTTGGCTACCGGCTCACTGGCGCCGGGCTTGGGCCAGCGATAGTTGACCGGGCCGGCGTCCTGCTGGCGGGCGAGGGCGACCATTTCGTTGAACACGGCGAAACCATCGGGGTCGCGGATGGCGGAAAGGTCCt                        >  2:158368/1‑150 (MQ=255)
                                                                                                                              cTGAATATCTGAGGTCTTGGCTACCAGCTCACTCGACACGGCGTTCGGCCAGTGATGGTTGAGCGGGTGGGTGTTCTGCTGGCGGGCGAGGTCGAGCATTTCGTTGAACACGGCTAAACCATCCGGGTTGCGGATGGCGGAAAGGTACTg                       <  2:1129807/150‑1 (MQ=255)
                                                                                                                              cTGAATATACGAGGTCTTGGCTACCGGCTCACTGGCGCCGGGCTTGGGCCAGCGATAGTTGACCGGGCCGGCGTCCTGCTGGCGGGCGAGGGCGACCATTGCGTTGAACACGGCGAAACCATCGGGGTCGCGGATGGCGGAAAGGTCCTg                       <  2:1013198/150‑1 (MQ=255)
                                                                                                                               tGAATATACGAGGTCTTGGCTACCGGCTCACTGGCGCCGGGCTTGGGCCAGCGATAGTTGACCGGGCCGGCGTCCTGCTGGCGGGCGAGGGCGACCATTTCGTTGAACACg                                                             >  2:866404/1‑111 (MQ=255)
                                                                                                                                 aaTATACGAGGACTTGGCTACCGGCTCACTGGCGCCGGGCTTGGGCCAGCGATAGTTGACCGGGCCGGCGTCCTGCTGGCGGGCGAGGGCGACCATTTCGTTGAACACGGCGAAACCATCGGGGGCGCGGATGGCGGAAAGGTCCTGgtc                    >  1:1663313/1‑150 (MQ=255)
                                                                                                                                   tataCGAGGTCTTGGCTACCGGCTCACTGGCGCCGGGCTTGGGCCAGCGATAGTTGACCGGGCCGGCGTCCTGCTGGCGGGCGAGGGCGACCATTTCGTTGAACACGGCGAAACCATCGGGGTCGCGGATGGCGGAAAGGTCCTGgtcgt                  >  2:782202/1‑150 (MQ=255)
                                                                                                                                    ataCGAGGTCTTGGCTACCGGCTCACTGGCGCCGGGCTTg                                                                                                                               <  1:1125845/40‑1 (MQ=255)
                                                                                                                                    ataCGAGGTCTTGGCTACCGGCTCACTGGCGCCGGGCTTg                                                                                                                               >  2:1125845/1‑40 (MQ=255)
                                                                                                                                      aCGAGGTCTTGGCTACCGGCTCACTGGCGCCGGGCTTGGGCCAGCGATAGTTGACCGGGCCGGCGTCCTGCTGGCGGGCGAGGGCGACCATTTCGTTGAACACGGCGAAACCATCGGGGTCGCGGATGGCGGAAAGGTCCTGGTCGTCGa               >  1:1593131/1‑150 (MQ=255)
                                                                                                                                      aCGAGGGCGTGGCTACCGGCTCACTGGCGCCGGGCTTGGGCCAGCGATAGTTGACCGGGCCGGCGTCCTGCTGGCGGGCGAGGGCGACCATTTCGTTGAACACGGCGAAACCATCGGGGTCGCGGATGGCGGAAAGGTCCTGGTCGTCGa               <  2:261995/150‑1 (MQ=255)
                                                                                                                                       cGAGGTCTTGGCTACCGGCTCACTGGCGCCGGGCTTGGGCCAGCGATAGTTGACCGGGCCGGCGTCCTGCTGGCGGGCGAGGGCGACCATTTCGTTGAACACGGCGAAACCATCGGGGTCGCGGATGGCGGAAAGGTCCTGGTCGTCGAg              >  2:1752645/1‑150 (MQ=255)
                                                                                                                                        gAGGTCTTGGCTACCGGCTCACTGGCGCCGGGCTTGGGCCAGCGATAGTTGATCGGGCCGGCGTCCTGCTGGCGGGCGAGGGCGACCATTTCGTTGAACACGGCGAAACCATCGGGGTCGCGGATGGCGGAAAGGTCCTgg                      <  2:2018000/141‑1 (MQ=255)
                                                                                                                                             cTTGGCTACCGGCTCACTGGCGCCGGGCTTGGGCCAGCGATAGTTGACCGGGCCGGCGTCCTGCTGGCGGGCGAGGGCGACCATTTCGTTGAACACGGCGAAACCATCGGGGTCGCGGATGGCGGAAAGGTCCTGGTCGTCGAGCTTggg        <  2:743935/150‑1 (MQ=255)
                                                                                                                                              ttGGCTACCGGCTCACTGGCGCCGGGCTTGGGCCAGCGATAGTTGACCGGGCCGGCGTCCTGCTGGCgggcgag                                                                                   <  2:267244/74‑1 (MQ=255)
                                                                                                                                              ttGGCTACCGGCTCACTGGCGCCGGGCTTGGGCCAGCGATAGTTGACCGGGCCGGCGTCCTGCTGGCgggcgag                                                                                   <  2:267146/74‑1 (MQ=255)
                                                                                                                                              ttGGCTACCGGCTCACTGGCGCCGGGCTTGGGCCAGCGATAGTTGACCGGGCCGGCGTCCTGCTGGCgggcgag                                                                                   >  1:267244/1‑74 (MQ=255)
                                                                                                                                                  cTACCGGCTCACTGGCGCCGGGCTTGGGCCAGCGATAGTTGACCGGGCCGGCGTCCTGCTGGCGGGCGAGGGCGACCATTTCGTTGAACACGGCGAAACCATCGGGGTCGCGGATGGCGGAAAGGTCCTGGTCGTCGAGCTTGGGGTTgg   <  1:399224/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                   
CAGCGCCATCAGCAGGGCAATGCCCACGCCAACCAGCGAAGCGTCGCGCAACTGGCGAGCGAATTCGGCCTGTACGTCATCGACGTACACGCCCGAACCGATGATCCAGCCCCACGGCTTGAACAGCTGAATATACGAGGTCTTGGCTACCGGCTCACTGGCGCCGGGCTTGGGCCAGCGATAGTTGACCGGGCCGGCGTCCTGCTGGCGGGCGAGGGCGACCATTTCGTTGAACACGGCGAAACCATCGGGGTCGCGGATGGCGGAAAGGTCCTGGTCGTCGAGCTTGGGGTTGGC  >  NC_002947/3263972‑3264268

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.