New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 3778552 =92 (1.040)5 (0.060) 5/224 NT 6.0% coding (1563/2052 nt) PP_3340 TonB‑dependent receptor
?NC_002947 3778597 = 74 (0.920)coding (1608/2052 nt) PP_3340 TonB‑dependent receptor

Only 100 of 111 total aligned reads displayed.

GGTGCCGCCGCGCAACGAGGACCTGGACCCGTCGATCAACGAAGGCTGGGAAACCGGCGTCAAGTTCACCCCGGCCAGCTGGGTCGATGGCCGCGTGGCCTATTGGCGTCAGGACGCCTCTGGCGAAGTGAGCCGTCGCCTGAACGACCCCAGCGGCGAGTCGGACAACGTCGGCGAAACACGCCGCTGGGGCTATGACCTGCAGGTCAACCTGCACCCGGACGAACGAACCGAGGTGTGGATGTCCTACTCCTGGCAGTACTCCAAGATCCTTGAGCCCAGCAGCGCGTTGCCAGG  >  NC_002947/3778405‑3778701
                                                                                                                                                   |                                                                                                                                                     
ggTGCCGCCGCGCAACGAGGACCTGGACCCGTCGATCAACGAAGGCTGGGAAACCGGCGTCAAGTTCACCCCGGCCAGCTGGGTCGATGGCCGCGTGGCCTATTGGCGTCAGGACGCCTCTGGCGAAGTGAGCCGTCGCCTGAACGAccc                                                                                                                                                     <  2:1031843/150‑1 (MQ=255)
 acagatggtgtggcacgtgatcgatttcctggcctttgctgcctggcaacgcgctgctgggctcaaggatcttggagtactgccaggagtaggacatccacacctcggttcgttcgtccgggtgcaggttgacctgcaggtcatagcccc                                                                                                                                                    <  1:1216913‑M1/4‑1 (MQ=255)
 acagatggtgtggcacgtgatcgatttcctggcctttgctgcctggcaacgcgctgctgggctcaaggatcttggagtactgccaggagtaggacatccacacctcggttcgttcgtccgggtgcaggttgacctgcaggtcatagc                                                                                                                                                       >  1:1646732‑M1/147‑147 (MQ=255)
   gccgccGCGCAACGAGGACCCGGCGCCCTCGCACAGCGAAGGCTGGTAAACCGGCGTCAAGTTCACCCCGGCCAGCTGGGTCGATGGCCGCGTGGCCTATTGGCGTCAGGACGCCTCTGGCGAAGTGAGCCGTCGCCTGAACGACCCCAg                                                                                                                                                  <  2:873936/150‑1 (MQ=255)
    ccgccgCGCAACGAGGACCTGGACCCGTCGATCAACGAAGGCTGGGAAACCGGCGTCAAGTTCACCCCGGCCAGCTGGGTCGATGGCCGCGTGGCCTATTGGCGTCAGGACGCCTCTGGCGAAGTGAGCCGTCGCCTGAACGACCCCAgc                                                                                                                                                 >  1:525327/1‑150 (MQ=255)
      gccgcGCAACGAGGACCTGGACCCGTCGATCAACGAAGGCTGGGAAACCGGCGTCAAGTTCACCCCGGCCAGCTGGGTCGATGGCCGCGTGGCCTATTGGCGTCAGGACGCCTCTGGCGAAGTGAGCCGTCGCCTGAACGACCCCAgcgg                                                                                                                                               >  2:2163393/1‑150 (MQ=255)
       ggtgtggcacgtgatcgatttcctggcctttgctgcctggcaacgcgctgctgggctcaaggatcttggagtactgccaggagtaggacatccacacctcggttcgttcgtccgggtgcaggttgacctgcaggtcatagCCCCAgcggc                                                                                                                                              >  1:722550‑M1/141‑150 (MQ=255)
       ggtgtggcacgtgatcgatttcctggcctttgctgcctggcaacgcgctgctgggctcaaggatcttggagtactgccaggagtaggacatccacacctcggttcgttcgtccgggtgcaggttgacctgcaggtcatagCCCCAgcggc                                                                                                                                              <  2:666699‑M1/10‑1 (MQ=255)
        gtgtggcacgtgatcgatttcctggcctttgctgcctggcaaagcgctgctgggctcaaggatcttggagtactgccaggagtaggacatccacacctcggttcgttcgtccgggtgcaggttgacctgcaggtcatagCCCCAgcggcg                                                                                                                                             <  1:1155514‑M1/11‑1 (MQ=255)
         gcgcACCGCGGATCGGGACCCGTCGATCAACGAAGGCTGGGAAACCGGCGTGCTGTTGACCTCGTGATGCTGGGTCGATAGTCGCGTGGCCTATTGGCGTAAGGACGCCTCTGGCGAAGTTAGCCGTCGCCTGAACGACCCCAGCGGCGa                                                                                                                                            <  1:550224/150‑1 (MQ=255)
         gcgcAACGAGGACCTGGACCCGTCGATCAACGAAGGCTGGGAAACCGGCGTCAAGTTCACCCCGGCCAGCTGGGTCGATGGCCGCGTGGCCTATTGGCGTCAGGACGCCTCTGGCGAAGTGAGCCGTCGCCTGAACGACCCCAGCGGCGa                                                                                                                                            >  1:1577493/1‑150 (MQ=255)
            cAACGAGGACCTGGACCCGTCGATCAACGAAGGCTGGGAAACCGGCGTCAAGTTCACCCCGGCCAGCTGGGTCGATGGCCGCGTGGCCTATTGGCGTCAGGACGCCTCTGGCGAAGTGAGCCGTCGCCTGAACGACCCCAGCGGCGAGTc                                                                                                                                         <  2:819709/150‑1 (MQ=255)
                gAGGACCTGGACCCGTCGATCAACGAAGGCTGGGAAACCGGCGTCAAGTTCACCCCGGCCAGCTGGGTCGATGGCCGCGTGGCCTATTGGCGTCAGGACGCCTCTGGCGAAGTGAGCCGTCGCCTGAACGACCCCAGCGGCGAGTCGGAc                                                                                                                                     <  1:13633/150‑1 (MQ=255)
                gAGGACCTGGACCCGTCGATCAACGAAGGCTGGGAAACCGGCGTCAAGTTCACCCCGGCCAGCTGGGTCGATCCCCTCTTGGCCTATTGGCGTCAGGACGCCTCTGACGAATTGAGCCGTCGCCTGAACGACCCCAGCGGCGAGTCGGAc                                                                                                                                     >  1:772489/1‑150 (MQ=255)
                  ggACCTGGACCCGTCGATCAACGAAGGCTGGGAAACCGGCGTCAAGTTCACCCCGGCCAGCTGGGTCGATGGCCGCGTGGCCTATTGGCGTCAGGACGCCTCTGGCGAAGTGAGCCGTCGCCTGAACGACCCCAGCGGCGAGTCGGACaa                                                                                                                                   <  1:2163393/150‑1 (MQ=255)
                   gACCTGGACCCGTCGATCAACGAAGGCTGGGAAACCGGCGTCAAGTTCACCCCGGCCAGCTGGGTCGATGGCCGCGTGGCCTATTGGCGTCAGGACGCCTCTGGCGAAGTGAGCCGTCGCCTGAACGACCCCAGCGGCGAGTCGGACAAc                                                                                                                                  <  1:640571/150‑1 (MQ=255)
                      cTGGACCCGTCGATCAACGAAGGCTGGGAAACCGGCGTCAAGTTCACCCCGGCCAGCTGGGTCAATGGCCGCGTGGCCTATTGGCGTCAGGACGCCTCTGGCGAAGTGAGCCGTCGCCTGAACGACCCCAGCGGCGAGTCGGACAACGTc                                                                                                                               >  1:1575605/1‑150 (MQ=255)
                       tGGACCCGTCGATCAACGAAGGCTGGGAAACCGGCGTCAAGTTCACCCCGGCCAGCTGGGTCGATGGCCGCGTGGCCTATTGGCGTCAGGACGCCTCTGGCGAAGTGAGCCGTCGCCTGAACGACCCCAGCGGCGAGTCGGACAACGTCg                                                                                                                              <  1:1199589/150‑1 (MQ=255)
                          aCCCGTCGATCAACGAAGGCTGGGAAACCGGCGTCAAGTTCACCCCGGCCAGCTGGGTCGATGGCCGCGTGGCCTATTGGCGTCAGGACGCCTCTGGCGAAGTGAGCCGTCGCCTGAACGAc                                                                                                                                                       >  2:1166071/1‑122 (MQ=255)
                          aCCCGTCGATCAACGAAGGCTGGGAAACCGGCGTCAAGTTCACCCCGGCCAGCTGGGTCGATGGCCGCGTGGCCTATTGGCGTCAGGACGCCTCTGGCGAAGTGAGCCGTCGCCTGAACGAc                                                                                                                                                       <  1:1166071/122‑1 (MQ=255)
                            ccGTCGATCAACGAAGGCTGGGAAACCGGCGTCAAGTTCACCCCGGCCAGCTGGGTCGATGGCCGCGTGGCCTATTGGCGTCAGGACGCCTCTGGCGAAGTGAGCCGTCGCCTGAACGACCCCAGCGGCGAGTCGGACAACGTCGGCGaa                                                                                                                         >  2:1451699/1‑150 (MQ=255)
                              tggcctttgctgcctggcaacgcgctgctgggctcaaggatcttggagtactgccaggagtaggacatccacacctcggttcgttcgtccgggtgcaggttgacctgcaggtcatagCCCCAGCGGCGAGTCGGACAACGTCGGCGAAac                                                                                                                       >  2:891275‑M1/118‑150 (MQ=255)
                                cGATCAACGAAGGCTGGGAAACCGGCGTCAAGTTCACCCCGGCCAGCTGGGTCGATGGCCGCGTGGCCTATTGGCTTCAGGACGCCTCTGGCGAAGTGAGCCGTCGCCTGAACGACCCCAGCGGCGTGTCGGACAACGTCGGCGAAacac                                                                                                                     <  2:885551/150‑1 (MQ=255)
                                 gATCAACGAAGGCTGGGAAACCGGCGTCAAGTTCACCCCGGCCAGCTGGGTCGATGGCCGCGTGGCCTATTGGCGTCAGGACGCCTCTGGCGAAGTGAGCCGTCGCCTGAACGACCCCAGCGGCGAGTCGGACAACGTCGGCGAAACAcg                                                                                                                    >  1:1418925/1‑150 (MQ=255)
                                 gATCAACGAAGGCTGGGAAACCGGCGTCAAGTTCACCCCGGCCAGCTGGGCTTATGGCCGCGTGGCCTATTGGCGTCAGGACGCCTCTGGCGAAGTGAGCCGTCGCCTGAACGACCCCAGCGGCGAGTCGGACAACGTCGGCGAAACAcg                                                                                                                    >  1:1870231/1‑150 (MQ=255)
                                   tCAACGAAGGCTGGGAAACCGGCGTCAAGTTCACCCCGGCCAGCTGGGTCGATGGCCGCGTGGCCTATTGGCGTCAGGACGCCTCTGGCGAAGTGAGCCGTCGCCTGAACGACCCCAGCGGCGAGTCGGACAACGTCGGCGAAACAcgcc                                                                                                                  <  1:460010/150‑1 (MQ=255)
                                   tCAACGAAGGCTGGGAAACCGGCGTCAAGTTCACCCCGGCCAGCTGGGTCGATGGCCGCGTGGCCTATTGGCGTCAGGACGCCTCTGGCGAAGTGAGCCGTCGCCTGAACGACCCCAGCGGCGAGTCGGACAACGTCGGCGAAACAcgcc                                                                                                                  >  1:2017537/1‑150 (MQ=255)
                                   tCAACGAAGGCTGGGAAACCGGCGTCAAGTTCACCCCGGCCAGCTGGGTCGATGGCCGCGTGGCCTATTGGCGTCAGGACGCCTCTGGCGAAGTGAGCCGTCGCCTGAACGACCCCAGCGGCGAGTCGGACAACGTCGGCGAAACAcgcc                                                                                                                  >  1:2126107/1‑150 (MQ=255)
                                   tCAACGAAGGCTGGGAAACCGGCGTCAAGTTCACCCCGGCCAGCTGGGTCGATGGCCGCGTGGCCTATTGGCGTCAGGACGCCTCTGGCGAAGTGAGCCGTCGCCTGAACGACCCCAGCGGCGAGTCGGACAACGTCGGCGAAACAcgcc                                                                                                                  >  1:2055749/1‑150 (MQ=255)
                                     aaCGAAGGCTGGGAAACCGGCGTCAAGTTCACCACGGCCAACTGGGTCGAGGGCCGCGTAGTCTATTGGCGGCAGGACCCCTGCGGCGAGCTGAGCGGTCGCCTGAACGACCCCAGCGGCGAGTCGGACAACGTCGTCGAAACAcgccgc                                                                                                                >  1:2350202/1‑150 (MQ=255)
                                      aCGAAGGCTGGGAAACCGGCGTCAAGTTCACCCCGGCCAGCTGGGTCGATGGCCGCGTGGCCTATTGGCGTCAGGACGCCTCTGGCGAAGTGAGCCGTCGCCTGAACGACCCCAGCGGCGAGTCgg                                                                                                                                       <  1:1185323/126‑1 (MQ=255)
                                      aCGAAGGCTGGGAAACCGGCGTCAAGTTCACCCCGGCCAGCTGGGTCGATGGCCGCGTGGCCTATTGGCGTCAGGACGCCTCTGGCGAAGTGAGCCGTCGCCTGAACGACCCCAGCGGCGAGTCgg                                                                                                                                       >  2:1185323/1‑126 (MQ=255)
                                        gAAGGCTGGGAAACCGGCGTCAAGTTCACCCCGGCCAGCTGGGTCGATGGCCGCGTGGCCTATTGGCGTCAGGACGCCTCTGGCGAAGTGAGCCGTCGCCTGAACGACCCCAGCGGCGAGTCGGACAACGTCGGCGAAACACGCCGCTgg                                                                                                             <  1:1185767/150‑1 (MQ=255)
                                          aGGCTGGGAAACCGGCGTCAAGTTCACCCCGGCCAGCTGGGTCGATGGCCGCGTGGCCTATTGGCGTCAGGACGCCTCTGGCGAAGTGAGCCGTCGCCTGAACGACCCCAGCGGCGAGTCGGACAACGTCGGCGAAACACGCCGCTgggg                                                                                                           <  2:2336010/150‑1 (MQ=255)
                                                 gAAACCGGCGTCAAGTTCACCCCGGCCAGCTGGGTCGATGGCCGCGTGGCCTATTGGCGTCAGGACGCCTCTGGCGAAGTGAGCCGTCGCCTGAACGACCCCAGCGGCGAGTCGGACAACGTCGGCGAAACACGCCGCTGGGGCTATGAc                                                                                                    <  2:817068/150‑1 (MQ=255)
                                                    aCCGGCGTCAAGTTCACCCCGGCCAGCTGGGTCGATGGCCGCGTGGCCTATTGGCGTCAGGACGCCTCTGGCGAAGTGAGCCGTCGCCTGAACGACCCCAGCGGCGAGTCGGACAACGTCGGCGAAACACGCCGCTGGGGCTATGACCTg                                                                                                 <  2:2017537/150‑1 (MQ=255)
                                                     ccGGCGTCAAGTTCACCCCGGCCAGCTGGGTCGATGGCCGCGTGGCCTATTGGCGTCAGGACGCCTCTGGCGAAGTGAGCCGTCGCCTGAACGACCCCAGCGGCGAGTCGGACAACGTCGGCGAAACACGCCGCTGGGGCTATGACCTGc                                                                                                <  1:1451699/150‑1 (MQ=255)
                                                       ggCGTCAAGTTCACCCCGGCCAGCTGGGTCGATGGCCGCGTGGCCTATTGGCGTCAGGACGCCTCTGGCGAAGTGAGCCGTCGCCTGAACGACCCCAGCGGCGAGTCGGACAACGTCGGCGAAACACGCCGCTGGGGCTATGACCTGCAg                                                                                              >  1:1995562/1‑150 (MQ=255)
                                                       ggCGTCAAGTTCACCCCGGCCAGCTGGGTCAATGGCCGCGTGGCCTATTGGCGTCAGGACGCCTCTGGCGAAGTGAGCCGTCGCCTGAACGACCCCAGCGGCGAGTCGGACAACGTCGGCGAAACACGCCGCTGGGGCTATGACCTGCAg                                                                                              <  2:1575605/150‑1 (MQ=255)
                                                        gCGTCAAGTTCACCCCGGCCAGCTGGGTCGATGGCCGCGTGGCCTATTGGCGTCAGGACGCCTCTGGCGAAGTGAGCCGTCGCCTGAACGACCCCAgcggc                                                                                                                                              >  1:1788238/1‑101 (MQ=255)
                                                        gCGTCAAGTTCACCCCGGCCAGCTGGGTCGATGGCCGCGTGGCCTATTGGCGTCAGGACGCCTCTGGCGAAGTGAGCCGTCGCCTGAACGACCCCAgcggc                                                                                                                                              <  2:1788238/101‑1 (MQ=255)
                                                         cGTCAAGTTCACCCCGGCCAGCTGGGTCGATGGCCGCGTGGCCTATTGGCGTCAGGACGCCTCTGGCGAAGTGAGCCGTCGCCTGAACGACCCCAGCGGCGAGTCGGACAACGTCGGCGAAACACGCCGCTGGGGCTATGACCTGCAGGt                                                                                            <  2:1995562/150‑1 (MQ=255)
                                                           tCAAGTTCACCCCGGCCAGCTGGGTCGATGGCCGCGTGGCCTATTGGCGTCAGGACGCCTCTGGCGAAGTGAGCCGTCGCCTGAACGACCCCAGCGGCGAGTCGGACAACGTCGGCGAAACACGCCGCTGGGGCTATGACCTGCAGGTCa                                                                                          >  1:2315200/1‑150 (MQ=255)
                                                             aaGTTCACCCCGGCCAGCTGGGTCGATGGCCGCGTGGCCTATTGGCGTCAGGACGCCTCTGGCGAAGTGAGCCGTCGCCTGAACGACCCCAGCGGCGAGTCGGACAACGTCGGCGAAACACGCCGCTGGGGCTATGACCTGCAggacatc                                                                                        >  2:1614810/1‑145 (MQ=255)
                                                             aaGTTCACCCCGGCCAGCTGGGTCGATGGCCGCGTGGCCTATTGGCGTCAGGACGCCTCTGGCGAAGTGAGCCGTCGCCTGAACGACCCCAGCGGCGAGTCGGACAACGTCGGCGAAACACGCCGCTGGGGCTATGACCTGCAggacatc                                                                                        >  2:1614788/1‑145 (MQ=255)
                                                             aaGTTCACCCCGGCCAGCTGGGTCGATGGCCGCGTGGCCTATTGGCGTCAGGACGCCTCTGGCGAAGTGAGCCGTCGCCTGAACGACCCCAGCGGCGAGTCGGACAACGTCGGCGAAACACGCCGCTGGGGCTATGACCTGCAGGTCAAc                                                                                        <  2:68095/150‑1 (MQ=255)
                                                               tcaaggatcttggagtactgccaggagtaggacatccacacctcggttcgttcgtccgggtgcaggttgacctgcaggtcatagCCCCAGCGGCGAGTCGGACAACGTCGGCGAAACACGCCGCTg                                                                                                              >  2:1556686‑M1/85‑126 (MQ=255)
                                                               tcaaggatcttggagtactgccaggagtaggacatccacacctcggttcgttcgtccgggtgcaggttgacctgcaggtcatagCCCCAGCGGCGAGTCGGACAACGTCGGCGAAACACGCCGCTg                                                                                                              <  1:1556686‑M1/42‑1 (MQ=255)
                                                               gTTCACCCCGGCCAGCTGGGTCGATGGCCGCGTGGCCTATTGGCGTCAGGACGCCTCTGGCGAAGTGAGCCGTCGCCTGAACGACCCCAGCGGCGAGTCGGACAACGTCCGCGAAACACGCCGCTGGGGCTATGACCTGCAGGTCAACCt                                                                                      >  1:1014851/1‑150 (MQ=255)
                                                                ttCACCCCGGCCAGCGGGGTCGATGGCCGCGTGGCCTATTGGCGTCAGGACGCCTCTGGCGCATCGAGCCGGCGCCTGAACGACCCCAGCGGCGAGTCGGACAACGTCGGCGAAACACGCCGCTGGGGCTATGACCTGCAGGTCAACCTg                                                                                     >  2:407283/1‑150 (MQ=255)
                                                                   aCCCCGGCCAGCTGGGTCGATGGCCGCTTGGCCTATTGGCGTCAGGACGCCTCTGGCGAAGTGAGCCGTCGCCTGAACGACCCCAGCGGCGAGTCGGACAACGTCGGCGAAACACGCCGCTGGGGCTATGACCTGCAGGTCAACCTGCAc                                                                                  >  2:1421502/1‑150 (MQ=255)
                                                                   aCCCCGGCCAGCTGGGTCGATGGCCGCGTGGCCTATTGGCGTCAGGACGCCTCTGGCGAAGTGAGCCGTCGCCTGAACGACCCCAGCGGCGAGTCGGACAACGTCGGCGAAACACGCCGCTGGGGCTATGACCTGCAGGTCAACCTGCAc                                                                                  >  2:945120/1‑150 (MQ=255)
                                                                    ccccGGCCAGCTGGGTCGATGGCCGCGTGGCCTATTGGCGTCAGGACGCCTCTGGCGAAGTGAGCCGTCGCCTGAACGACCCCAGCGGCGAGTCGGACAACGTCGGCGAAACACGCCGCTGGGGCTATGACCTGCAGGTTGACCTGCagg                                                                                 <  1:1380379/150‑3 (MQ=255)
                                                                     cccGGCCAGCTGGGTCGATGGCCGCGTGGCCTATTGGCGTCAGGACGCCTCTGGCGAAGTGAGCCGTCGCCTGAACGACCCCAGCGGCGAGTCGGACAACGTCg                                                                                                                              >  2:126170/1‑104 (MQ=255)
                                                                     cccGGCCAGCTGGGTCGATGGCCGCGTGGCCTATTGGCGTCAGGACGCCTCTGGCGAAGTGAGCCGTCGCCTGAACGACCCCAGCGGCGAGTCGGACAACGTCGGCGAAACACGCCGCTGGGGCTATGACCTGCAGGTCAACCTGCAccc                                                                                <  2:1688477/150‑1 (MQ=255)
                                                                       cGGCCAGCTGGGTCGATGGCCGCGTGGCCTATTGGCGTCAGGACGCCTCTGGCGAAGTGAGCCGTCGCCTGAACGACCCCAGCGGCGAGTCGGACAACGTCGGCGAAACACGCCGCTGGGGATATGACCTTCAGGTTGACCTGCaggtca                                                                              <  2:1418925/150‑6 (MQ=255)
                                                                         gCCAGCTGGGTCGATGGCCGCGTGGCCTATTGGCGTCAGGACGCCTCTGGCGAAGTGAGCCGTCGCCTGAACGACCCCAGCGGCGAGTCGGACAACGTCGGCGAAACACGCCGCTGGGGCTATGACCTGCAGGTCAACCTGCACCCGGac                                                                            <  1:945120/150‑1 (MQ=255)
                                                                                gggTCGATGGCCGCGTGGCCTATTGGCGTCAGGACGCCTCTGGCGAAGTGAGCCGTCGCCTGAACGACCCCAGCGGCGAGTCGGACAACGTCGGCGAAACACGCCGCTGGGGCTATGACCTGCAGGTCAACCTGCACCCGGAcgaacgaa                                                                     <  2:2055749/150‑1 (MQ=255)
                                                                                   ccaggagtaggacatccacacctcggttcgttcgtccgggtgcaggttgacctgcaggtcatagCCCCAGCGGCGAGTCGGACAACGTCAGCGAAACACGCCGCTgg                                                                                                             >  2:892447‑M1/65‑107 (MQ=255)
                                                                                    cGATGGCCGCGTGGCCTATTGGCGTCAGGACGCCTCTGGCGAAGTGAGCCGTCGCCTGAACGACCCCAGCGGCGAGTCGGACAACGTCGGCGAAACACGCCGCTGGGGCTATGACCTGCAGGTCAACCTGCATCCGGATGATCGAACCGa                                                                 <  2:92109/150‑1 (MQ=255)
                                                                                     gATGGCCGCGTGGCCTATTGGCGTCAGGACGCCTCTGGCGAAGTGAGCCGTCGCCTGAACGACCCCAGCGGCGAGTCGGACAACGTCGGCGAAACACGCCGCTGGGGCTATGACCTGCAGGTCAACCTGCACCCGGACGAACGAACCGAg                                                                <  1:1102001/150‑1 (MQ=255)
                                                                                         gCCGCGTGGCCTATTGGCGTCAGGACGCCTCTGGCGAAGTGAGCCGTCGCCTGAACGACCCCAGCGGCGAGTCGGACAACGTCGGCGAAACACGCCGCTGGGGCTATGACCTGCAGGTCata                                                                                        >  1:37503/1‑120 (MQ=255)
                                                                                         gCCGCGTGGCCTATTGGCGTCAGGACGCCTCTGGCGAAGTGAGCCGTCGCCTGAACGACCCCAGCGGCGAGTCGGACAACGTCGGCGAAACACGCCGCTGGGGCTATGACCTGCAGGTCata                                                                                        <  2:37503/122‑3 (MQ=255)
                                                                                         gCCGCGTGGCCTATTGGCGTCAGGACGCCTCTGGCGAAGTGAGCCGTCGCCTGAACGACCCCAGCGGCGAGTCGGACAACGTCGGCGAAACACGCCGCTGGGGCTATGACCTGCAGGTCAACCTGCACCCGGACGAACGAACCGAGgtgt                                                            <  2:1577493/150‑1 (MQ=255)
                                                                                                ggCCTATTGGCGTCAGGACGCCTCTGGCGAAGTGAGCCGTCGCCTGAACGACCCCAGCGGCGAGTCGGACAACGTCGGCGAAACACGCCGCTGGGGCTATGAc                                                                                                    >  1:534317/1‑103 (MQ=255)
                                                                                                ggCCTATTGGCGTCAGGACGCCTCTGGCGAAGTGAGCCGTCGCCTGAACGACCCCAGCGGCGAGTCGGACAACGTCGGCGAAACACGCCGCTGGGGCTATGAc                                                                                                    <  2:534317/103‑1 (MQ=255)
                                                                                                 gCCTATTGGCGTCAGGACGCCTCTGGCGAAGTGAGCCGTCGCCTGAACGACCCCAGCGGCGAGTCGGACAACGTCGGCGAAACACGCCGCTGGGGCTATGACCTGCAGGTCAACCTGCACCCGGACGAACGAACCGAGGTGTGGATGTcc                                                    >  2:2261116/1‑150 (MQ=255)
                                                                                                 gCCTATTGGCGTCAGGACGCCTCTGGCGAAGTGAGCCGTCGCCTGAACGACCCCAGCGGCGAGTCGGACAACGTCGGCGAAACACGCCGCTGGGGCTATGACCTGCAGGTCAACCTGCACCCGGACGAACGAACCGAGGTGTGGATGTcc                                                    >  1:405876/1‑150 (MQ=255)
                                                                                                   cTATTGGCGTCAGGACGCCTCTGGCGAAGTGAGCCGTCGCCTGAACGACCCCAGCGGCGAGTCGGACAACGTCGGCGAAACACGCCGCTGGGGCTATGACCTGCAGGTCAACCTGCACCCGGACGAACGAACCGAGGTGTGGATGTCCTa                                                  <  2:2141646/150‑1 (MQ=255)
                                                                                                    tATTGGCGTCAGGACGCCTCTGGCGAAGTGAGCCGTCGCCTGAACGACCCCAGCGGCGAGTCGGACAACGTCGGCGAAACACGCCGCTGGGGCTATGACCTGCAGGTCAACCTGCACCCGGACGAACGAACCGAGGTGTGGATGTCCTAc                                                 >  1:1815340/1‑150 (MQ=255)
                                                                                                    tATTGGCGTCAGGACGCCTCTGGCGAAGTGAGCCGTCGCCTGAACGACCCCAGCGGCGAGTCGGACAACGTCGGCGAAACACGCCGCTGGGGCTATGACCTGCAGGTCAACCTGCACCCGGACGAACGAACCGAGGTGTGGATGTCCTAc                                                 >  2:41519/1‑150 (MQ=255)
                                                                                                         gCGTCAGGACGCCTCTGGCGAAGTGAGCCGTCGCCTGAACGACCCCAGCGGCGAGTCGGACAACGTCGGCGAAACACGCCGCTGGGGCTATGACCTGCAGGTCAACCTGCACCCGGACGAACGAACCGAGGTGTGGATGTCCTACTCCTg                                            >  1:1274967/1‑150 (MQ=255)
                                                                                                          cGTCAGGACGCCTCTGGCGAAGTGAGCCGTCGCCTGAACGACCCCAGCGGCGAGTCGGACAACGTCGGCGAAACACGCCGCTGGGGCTATGACCTGCAGGTCAACCTGCACCCGGACGAACGAACCGAGGTGTGGATGTCCTACTCCTgg                                           <  2:512918/150‑1 (MQ=255)
                                                                                                          cGTCAGGACGCCTCTGGCGAAGTGAGCCGTCGCCTGAACGACCCCAGCGGCGAGTCGGACAACGTCGGCGAAACACGCCGCTGGGGCTATGACCTGCAGGTCAACCTGCACCCGGACGAACGAACCGAGGTGTGGATGTCCTACTCCTgg                                           <  2:1544944/150‑1 (MQ=255)
                                                                                                          cGTCAGGACGCCTCTGGCGAAGTGAGCCGTCGCCTGAACGACCCCAGCGGCGAGTCGGACAACGTCGGCGAAACACGCCGCTGGGGCTATGACCTGCAGGTCAACCTGCACCCGGAAGAACGAACCGAGGTGTGGATGTCCTACTCCTgg                                           <  1:1090649/150‑1 (MQ=255)
                                                                                                            tCAGGACGCCTCTGGCGAAGTGAGCCGTCGCCTGAACGACCCCAGCGGCGAGTCGGACAACGTCGGCGAAACGCGCCGCTGGGGCTATGACCTGCAGGTCAACCTGCACCCGGACGAACGAACCGAGGTGTGGATGTCCTACTCCTGGCa                                         >  1:1784517/1‑150 (MQ=255)
                                                                                                                gACGCCTCTGGCGAAGTGAGCCGTCGCCTGAACGACCCCAGCGGCGAGTCGGACAACGTCGGCGAAACACGCCGCTGGGGCTATGACCTGCAGGTCAAc                                                                                        >  2:725822/1‑99 (MQ=255)
                                                                                                                gACGCCTCTGGCGAAGTGAGCCGTCGCCTGAACGACCCCAGCGGCGAGTCGGACAACGTCGGCGAAACACGCCGCTGGGGCTATGACCTGCAGGTCAAc                                                                                        <  1:725822/99‑1 (MQ=255)
                                                                                                                     ctctGGCGAAGTGAGCCGTCGCCTGAACGACCCCAGCGGCGAGTCGGACAACGTCGGCGAAACACGCCGCTgg                                                                                                             >  2:2317542/1‑73 (MQ=255)
                                                                                                                     ctctGGCGAAGTGAGCCGTCGCCTGAACGACCCCAGCGGCGAGTCGGACAACGTCGGCGAAACACGCCGCTgg                                                                                                             <  1:2317542/73‑1 (MQ=255)
                                                                                                                     ctctGGCGAAGTGAGCCGTCGCCTGAACGACCCCAGCGGCGAGTCGGACAACGTCGGCGAAACACGCCGCTGGGGCTATGACCTGCAGGTCAACCTGCACCCGGACGAACGAACCGAGGTGTGGATGTCCTACTCCTGGCAGTACTCaaa                                >  2:1969983/1‑150 (MQ=255)
                                                                                                                       ctGGCGAAGTGAGCCGTCGCCTGAACGACCCCAGCGGCGAGTCGGACAACGTCGGCGAAACACGCCGCTGGGGCTATGACCTGCAGGTCAACCTGCACCCGGACGAACGAACCGAGGTGTGGATGTCCTACTCCTGGCAGTACTCCAAGa                              >  2:1155514/1‑150 (MQ=255)
                                                                                                                            gAAGTGAGCCGTCGCCTGAACGACCCCAGCGGCGAGTCGGACAACGTCGGCGAAACACGCCGCTGGGGCTATGACCTGCAGGTCAACCTGCACCCGGACGAACGAACCGAGGTGTGGATGTCCTACTCCTGGCAGTACTCCAAGATCCtt                         <  2:2315200/150‑1 (MQ=255)
                                                                                                                            gAAGTGAGCCGTCGCCTGAACGACCCCAGCGGCGAGTCGGACAACGTCGGCGAAACACGCCGCTGGGGCTATGACCTGCAGGTCAACCTGCACCCGGACGAACGAACCGAGGTGTGGATGTCCTACTCCTGGCAGTACTCCAAGATCCtt                         <  2:1014851/150‑1 (MQ=255)
                                                                                                                              aGTGAGCCGTCGCCTGAACGACCCCAGCGGCGAGTCGGACAACGTCGGCGAAACGCGCCGCTGGGGCTATGACCTGCAGGTCAACCTGCACCCGGACGAACGAACCGAGGTGTGGATGTCCTACTCCTGGCAGTACTCCAAGATCCTTGa                       <  2:1784517/150‑1 (MQ=255)
                                                                                                                              aGTGAGCCGTCGCCTGAACGACCCCAGCGGCGAGTCGGACAACGTCGGCGAAACACGCCGCTGGGGCTATGACCTGCAGGTCAACCTGCACCCGGACGAACGAACCGAGGTGTGGATGTCCTACTCCTGGCAGTACTCCAAGATCCTTGa                       <  2:2126107/150‑1 (MQ=255)
                                                                                                                                tGAGCCGTCGCCTGAACGACCCCAGCGGCGAGTCGGACAACGTCGACGAAACACGCCGCTGGGGCTATGACCTGCAGGTCAACCTGCACCCGGacgaa                                                                         >  2:608887/1‑98 (MQ=255)
                                                                                                                                tGAGCCGTCGCCTGAACGACCCCAGCGGCGAGTCGGACAACGTCGACGAAACACGCCGCTGGGGCTATGACCTGCAGGTCAACCTGCACCCGGacgaa                                                                         <  1:608887/98‑1 (MQ=255)
                                                                                                                                tGAGCCGTCGCCTGAACGACCCCAGCCGCGAGTCGGACAACGTCGGCGAAACACGCCGCTGGGGCTATGACCTGCAGGTCAACCTGCACCCGGACGAACGAACCGAGGTGTGGATGTCCTACTCCTGGCAGTACTCCAAGATCCTTGAGc                     <  1:681144/150‑1 (MQ=255)
                                                                                                                                   gCCGTCGCCTGAACGACCCCAGCGGCGAGTCGGACAACGTCGGCGAAACACGCCGCTGGGGCTATGACCTGCAGGTCAACCTGCACCCGGACGAACGAACCGAGgtgt                                                            >  2:477767/1‑108 (MQ=255)
                                                                                                                                    ccGTCGCCTGAACGACCCCAGCGGCGAGTCGGACAACGTCGGCGAAACACGCCGCTGGGGCTATGACCTGCAGGTCAACCTGCACCCGGACGAACGAACCGAGGTGTGGATGTCCTACTCCTGGCAGTa                                      <  1:1887837/129‑1 (MQ=255)
                                                                                                                                    ccGTCGCCTGAACGACCCCAGCGGCGAGTCGGACAACGTCGGCGAAACACGCCGCTGGGGCTATGACCTGCAGGTCAACCTGCACCCGGACGAACGAACCGAGGTGTGGATGTCCTACTCCTGGCAGTa                                      >  2:1887837/1‑129 (MQ=255)
                                                                                                                                      gTCGCCTGAACGACCCCAGCGGCGAGTCGGACAACGTCGGCGAAACACGCCGCTGGGGCTATGACCTGCAGGTCAACCTGCACCCGGACGAACGAACCGAGGTGTGGATGTCCTACTCCTGGCAGTACTCCAAGATCCTTGAGCCcagca               <  2:1274967/150‑1 (MQ=255)
                                                                                                                                           cTGAACGACCCCAGCGGCGAGTCGGACAACGTCGGCGAAACACGCCGCTGGGGCTAt                                                                                                       <  2:1058159/57‑1 (MQ=255)
                                                                                                                                           cTGAACGACCCCAGCGGCGAGTCGGACAACGTCGGCGAAACACGCCGCTGGGGCTAt                                                                                                       >  1:1058159/1‑57 (MQ=255)
                                                                                                                                              aaCGACCCCAGCGGCGAGTCGGACAACGTCGGCGAAACACGCCGCTGGGGCTATGACCTGCAGGTCAACCTGCACCCGGACGAACGAACCGAGGTGTGGATGTCCTACTCCTGGCAGTACTCCAAGATCCTTGAGCCCAGCAGCGCGtt        >  2:2375563/1‑149 (MQ=255)
                                                                                                                                              aaCGACCCCAGCGGCGAGTCGGACAACGTCGGCGAAACACGCCGCTGGGGCTATGACCTGCAGGTCAACCTGCACCCGGACGAACGAACCGAGGTGTGGATGTCCTACTCCTGGCAGTACTCCAAGATCCTTGAGCCCAGCAGCGCGtt        <  1:2375563/149‑1 (MQ=255)
                                                                                                                                                 gACCCCAGCGGCGAGTCGGACAACGTCGGCGAAACACGCCGCTGGGGCTATGACCTGCAGGTCAACCTGCACCCGGACGAACGAACCGAGGTGTGGATGTCCTACTCCTGGCAGTAGTCCAAGATCCTTGAGCCCAGCAGCGCGTTGCCa    <  2:525327/150‑1 (MQ=255)
                                                                                                                                                 gACCCCAGCGGCGAGTCGGACAACGTCGGCGAAACACGCCGCTGGGGCTATGACCTGCAGGTCAACCTGCACCCGGACGAACGAACCGAGGTGTGGATGTCCTACTCCTGGCAGTACTCCAAGATCCTTGAGCCCAGCAGCGCGTTGCCa    >  1:1399201/1‑150 (MQ=255)
                                                                                                                                                   CCCCAGCGGCGAGTCGGACAACGTCGGCGAAACACGCCGCTGGGGCTATGACCTGCAGGTCAACCTGCACCCGGACGAACGAACCGAGGTGTGGATGTCCTACTCCTGGCAGTACTCCAAGATCCTTGAGCCCAGCAGCGCGTTGCCAgg  >  2:1815340‑M1/1‑150 (MQ=255)
                                                                                                                                                   |                                                                                                                                                     
GGTGCCGCCGCGCAACGAGGACCTGGACCCGTCGATCAACGAAGGCTGGGAAACCGGCGTCAAGTTCACCCCGGCCAGCTGGGTCGATGGCCGCGTGGCCTATTGGCGTCAGGACGCCTCTGGCGAAGTGAGCCGTCGCCTGAACGACCCCAGCGGCGAGTCGGACAACGTCGGCGAAACACGCCGCTGGGGCTATGACCTGCAGGTCAACCTGCACCCGGACGAACGAACCGAGGTGTGGATGTCCTACTCCTGGCAGTACTCCAAGATCCTTGAGCCCAGCAGCGCGTTGCCAGG  >  NC_002947/3778405‑3778701

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.