New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 4928740 =87 (0.980)5 (0.060) 4/238 NT 5.7% coding (1477/2244 nt) cheA chemotaxis histidine kinase CheA
?NC_002947 4928767 = 82 (0.960)coding (1450/2244 nt) cheA chemotaxis histidine kinase CheA

Only 100 of 104 total aligned reads displayed.

CTCGGCGGCGTCCTTGTCCATCAGGCCCTTTTCCACGGCCTTGGCGCGCAGGATGTTCGGGTCCATGCCCTTGCCGTCGTCCGAGATCGACAGCAGGATGTGGTCGCCTTCCTGTTCGGCCGACAGCACTACGCGGCCGGTACGCGCCTTGCCAGACGCTTCACGCTCGTCGGGCATCTCGATACCGTGGTCGACCGCATTGCGCACCAAGTGCACCAGCGGGTCGGCCAAGGCTTCTACGAGGTTCTTGTCAAGGTCGGTCTCTTCGCCGACCAGTTCCAGATTGATCTCTTTC  >  NC_002947/4928591‑4928885
                                                                                                                                                     |                                                                                                                                                 
cTCGGCGGCGTCCTTGTCCATCAGGCCCTTTTCCACGGCCTTGGCGCGCAGGATGTTCGGGTCCATGCCCTTGCCGTCGTCCGAGATCGACAGCAGGATGTGGTCGCCTTCCTGTTCGGCCGACAGCACTACGCGGCCGGTACGCGCCtt                                                                                                                                                   <  2:1239961/150‑1 (MQ=255)
 tCGGCGGCGTCCTTGTCCATCAGGCCCTTTTCCACGGCCTTGGCGCGCAGGATGTTCGGGTCCATGCCCTTGCCGTCGTCCGAGATCGACAGCAGGATGTGGTCGCCTTCCTGTTCGGCCGACAGCACTACGCGGCCGGTACGCGCCTTg                                                                                                                                                  >  2:1753216/1‑150 (MQ=255)
 tCGGCGGCGTCCTTGTCCATCAGGCCCTTTTCCACGGCCTTGGCGCGCAGGATGTTCGGGTCCATGCCCTTGCCGTCGTCCGAGATCGACAGCAGGATGTGGTCGCCTTCCTGTTCGGCCGACAGCACTACGCGGCCGGTACGCGCCTTg                                                                                                                                                  >  2:2225546/1‑150 (MQ=255)
  cggcggCGTCCTTGTCCATCAGGCCCTTTTCCACGGCCTTGGCGCGCAGGATGTTCGGGTCCATGCCCTTGCCGTCGTCCGAGATCGACAGCAGGATGTGGTCGCCTTCCTGTTCGGCCGACAGCACTACGCGGCCGGTACGCGCCTTGc                                                                                                                                                 <  1:2065242/150‑1 (MQ=255)
  cggcggCGTCCTTGTCCATCAGGCCCTTTTCCACGGCCTTGGCGCGCAGGATGTTCGGGTCCATGCCCTTGCCGTCGTCCGAGATCGACAGCAGGATGTGGTCGCCTTCCTGTTCGGCCGACAGCACTACGCGGCCGGTACGCGCCTTGc                                                                                                                                                 >  2:1620840/1‑150 (MQ=255)
      ggcgTCCTTGTCCATCAGGCCCTTTTCCACGGCCTTGGCGCGCAGGATGTTCGGGTCCATGCCCTTGCCGTCGTCCGAGATCGACAGCAGGATGTGGTCGCCTTCCTGTTCGGCCGACAGCACTACGCGGCCGGTACGCGCCTTGCCAGa                                                                                                                                             >  1:376367/1‑150 (MQ=255)
         gTCCTTGTCCATCAGGCCCTTTTCCACGGCCTTGGCGCGCAGGATGTTCGGGTCCATGCCCTTGCCGTCGTCCGAGATCGACAGCAGGATGTGGTCACCTTCCTGTTCGGCCGACAGCACTACGCGGCCGGTACGCGCCTTGCCAGACGc                                                                                                                                          >  1:1339705/1‑150 (MQ=255)
         gTCCTTGTCCATCAGGCCCTTTTCCAAGGCCGTGGCGCGCAGGATGTTCGGGTCCATGCCCTTGCCGTCGTCCGAGATCGACAGCAGGATGTGGTCGCCTTCCTGTTCGGCCGACAGCACTACGCGGCCGGTACGCGCCTTGCCAGACGc                                                                                                                                          >  1:443885/1‑150 (MQ=255)
            cTTGTCCATCAGGCCCTTTTCCACGGCCTTGGCGCGCAGGATGTTCGGGTCCATGCCCTTGCCGTCGTCCGCGATCGACAGCAGGATGTGGTCGCCTTCCTGTTCGGCCGACAGCACTACGCGGCCGGTACGCGCCTTGc                                                                                                                                                 >  1:2009727/1‑140 (MQ=255)
            cTTGTCCATCAGGCCCTTTTCCACGGCCTTGGCGCGCAGGATGTTCGGGTCCATGCCCTTGCCGTCGTCCGAGATCGACAGCAGGATGTGGTCGCCTTCCTGTTCGGCCGACAGCACTACGCGGTCGGTACGCGCCTTGCCAGACGCTTc                                                                                                                                       <  2:2358896/150‑1 (MQ=255)
            cTTGTCCATCAGGCCCTTTTCCACGGCCTTGGCGCGCAGGATGTTCGGGTCCATGCCCTTGCCGTCGTCCGAGATCGACAGCAGGATGTGGTCGCCTTCCTGTTCGGCCGACAGCACTACGCGGCCGGTACGCGCCTTGc                                                                                                                                                 <  2:2009727/140‑1 (MQ=255)
            cTTGTCCATCAGGCCCTTTTCCACGGCCTTGGCGCGCAGGATGTTCGGGTCCATGCCCTTGCCGTCGTCCGAGATCGACAGCAGGATGTGGTCGCCTTCCTGTTCGGCCGACAGCACTACGCGGCCGGTACGCGCCTTGCCAGACGCTTc                                                                                                                                       <  1:2130390/150‑1 (MQ=255)
                  cATCAGGCCCTTTTCCACGGCCTTGGCGCGCAGGATGTTCGGGTCCATGCCCTTGCCGTCGTCCGAGATCGACAGCAGGATGTGGTCGCCTTCCTGTTCGGCCGACAGCACTACGCGGCCGGTACGCGCCTTGCCAGACGCTTCACGCtc                                                                                                                                 >  1:445669/1‑150 (MQ=255)
                     ccagctgaagaaagagatcaatctggaactggtcggcgaagagaccgaccttgacaagaacctcgtagaagccttggccgacccgctggtgcacttggtgcgcaatgcggtcgaccacggtatcgagat                                                                                                                                                   <  2:446456‑M1/1‑1 (MQ=255)
                     ccagctgaagaaagagatcaatctggaactggtcggcgaagagaccgaccttgacaagaacctcgtagaagccttggccgacccgctggtgcacttggtgcgcaatgcggtcgaccacggtatcgagat                                                                                                                                                   >  1:446456‑M1/129‑129 (MQ=255)
                       agctgaagaaagagatcaatctggaactggtcggcgaagagaccgaccttgacaagaacctcgtagaagccttggccgacccgctggtgcacttggtgcgcaatgcggtcgaccacggtatcgagaTGCCAGACGCTTCACGctcgtcgc                                                                                                                            >  1:85060‑M1/127‑149 (MQ=255)
                        gCCCTTTTCCACGGCCTTGGCGCGCAGGATGTTCGGGTCCATGCCCTTGCCGTCGTCCGAGATCGACAGCAGGATGTGGTCGCCTTCCTGTTCGGCCGACAGCACTACGCGGCCGGTACGCGCCTTGCCAGACGCTTCACGCTCGTCggg                                                                                                                           >  2:1178391/1‑150 (MQ=255)
                         cccTTTTCCACGGCCTTGGCGCGCAGGATGTTCGGGTCCATGCCCTTGCCGTCGTCCGAGATCGACAGCAGGATGTGGTAGCCTTCCTGTTCGGCCGACAGCACCATGCGGCCGGTACGCGCCTTGCCAGACGCTTCACGCTCGTCGGGc                                                                                                                          <  1:2225546/150‑1 (MQ=255)
                          ccTTTTCCACGGCCTTGGCGCGCAGGATGTTCGGGTCCATGCCCTTGCCGTCGTCCGAGATCGACAGCAGGATGTGGTCGCCTTCCTGTTCGGCCGACAGCACTACGCGGCCGGTACGCGCCTTGCCAGACGCTTCACGCTCGTCGGGCa                                                                                                                         >  2:1696023/1‑150 (MQ=255)
                           cTTTTCCACGGCCTTGGCGCGCAGGATGTTCGGGTCCATGCCCTTGCCGTCGTCCGAGATCGACAGCAGGATGTGGTCGCCTTCCTGTTCGGCCGACAGCACTACGCGGCCGGTACGCGCCTTGCCAGACGCTTCACGCTCGTCGGGCAt                                                                                                                        >  2:2095173/1‑150 (MQ=255)
                            ttttCCACGGCCTTGGCGCGCAGGATGTTCGGGTCCATGCCCTTGCCGTCATCCGAGATCGACAGCAGGATGTGGTCGCCTTCCTGTTCGGCCGACAGCACTACGCGGCCGGTACGCGCCTTGCCAGACGCTTCACGCTCGTCGGGCAtc                                                                                                                       >  1:62384/1‑150 (MQ=255)
                                 cACGGCCTTGGCGCGCAGGATGTTCGGGTCCATGCCCTTGCCGTCGTCCGAGATCGACAGCAGGATGTGGTCGCCTTCCTGTTCGGCCGACAGCACTACGCGGCCGGTACGCGCCTTGCCAGACGCTTCACGCTCGTCGGGCATCTCGAt                                                                                                                  >  2:1425837/1‑150 (MQ=255)
                                  aCGGCCTTGGCGCGCAGGATGTTCGGGTCCATGCCCTTGCCGTCGTCCGAGATCGACAGCAGGATGTGGTCGCCTTCCTGTTCGGCCGACAGCACTACGCGGCCGGTACGCGCCTTGCCAGACGCTTCa                                                                                                                                      <  2:880278/129‑1 (MQ=255)
                                  aCGGCCTTGGCGCGCAGGATGTTCGGGTCCATGCCCTTGCCGTCGTCCGAGATCGACAGCAGGATGTGGTCGCCTTCCTGTTCGGCCGACAGCACTACGCGGCCGGTACGCGCCTTGCCAGACGCTTCa                                                                                                                                      >  1:880278/1‑129 (MQ=255)
                                  aCGGCCTTGGCGCGCAGGATGTTCGGGTCCATGCCCTTGCCGTCGTCCGAGATCGACAGCAGGATGTGGTCGCCTTCCTGTTCGGCCGACAGCACTACGCGGCCGGTACGCGCCTTGCCAGACGCTTCACGCTCGTCGGGCATCTCGATa                                                                                                                 >  2:498619/1‑150 (MQ=255)
                                  aCGGCCTTGGCGCGCAGGATGTTCGGGTCCATGCCCTTGCCGTCGTCCGAGATCGACAGCAGGATGTGGTCGCCTTCCTGTTCGGCCGACAGCACTACGCGGCCGGTACGCGCCTTGCCAGACGCTTCACGCTCGTCGGGCATCTCGATa                                                                                                                 >  2:1784958/1‑150 (MQ=255)
                                    ggCCTTGGCGCGCAGGATGTTCGGGTCCATGCCCTTGCCGTCGTCCGAGATCGACAGCAGGATGTGGTCGCCTTCCTGTTCGGCCGACAGCACTACGCGGCCGGTACGCGCCTTGCCAGACGCTTCACGCTCGTCGGGCATCTCGATAcc                                                                                                               >  1:650414/1‑150 (MQ=255)
                                      ccTTGGCGCGCAGGATGTTCGGGTCCATGCCCTTGCCGTCGTCCGAGATCGACAGCAGGATGTGGTCGCCTTCCTGTTCGGCCGACAGCACTACGCGGCCGGTACGCGCCTTGCCAGACGCTTCACGCTCGTCGAGCATCTCGATACCGt                                                                                                             >  2:1277324/1‑150 (MQ=255)
                                        ttGGCGCGCAGGATGTTCGGGTCCATGCCCTTGCCGTCGGCCGAGATCGACAGCAGGATGTGGTCGCCTTCCTGTTCGGCCGACAGCACTACGCGGCCGGTACGCGCCTTGCCAGACGCTTCACGCTCGTCGGGCATCTCGATACCGTgg                                                                                                           <  1:633883/150‑1 (MQ=255)
                                              cgcAGGATGTTCGGGTCCATGCCCTTGCCGTCGTCCGAGATCGACAGCAGGATGTGGTCGCCTTCCTGTTCGGCCGACAGCACTACGCGGCCGGTACGCGCCTTGCCAGACGCTTCACGCTCGTCGGGCATCTCGATACCGTGGTCGAcc                                                                                                     <  2:1972637/150‑1 (MQ=255)
                                               gcAGGATGTTCGGGTCCATGCCCTTGCCGTCGTCCGAGATCGACAGCAGGATGTGGTCGCCTTCCTGTTCGGCCGACAGCACTACGCGGCCGGTACGCGCCTTGCCAGACGCTTCACGCTCGTCGGGCATCTCGATACCGTGGTCGACCg                                                                                                    <  1:1334776/150‑1 (MQ=255)
                                                 aGGATGTTCGGGTCCATGCCCTTGCCGTCGTCCGAGATCGACAGCAGGATGTGGTCGCCTTCCTGTTCGGCCGACAGCACTACGCGGCCGGTACGCGCCTTGCCAGACGCTTCACGCTCGTCGGGCATCTCGATACCGTGGTCAACCGCa                                                                                                  <  1:498619/150‑1 (MQ=255)
                                                        tagggTCCATGCCCTTGCCGTCGTCCGAGATCGACAGCAGGATGTGGTCGCCTTCCTGTTCGGCCGACAGCACTACGCGGCCGGTACGCGCCTTGCCAGACGCTTCACGCTCGTCGGGCATCTCGATACCGTGGTCGACCGCATTGCGCa                                                                                           <  1:639556/148‑1 (MQ=255)
                                                         cGGGTCCATGCCCTTGCCGTCGTCCGAGATCGACAGCAGGATGTGGTCGCCTTCCTGTTCGGCCGACAGCACTACGCGGCCGGTACGCGCCTTGCCAGACGCTTCACGCTCGTCGGGCATCTCGATACCGTGGTCGACCGCATTGCGCAc                                                                                          >  1:98888/1‑150 (MQ=255)
                                                          gggTCCATGCCCTTGCCGTCGTCCGAGATCGACAGCAGGATGTGGTCGCCTTCCTGTTCGGCCGACAGCACTACGCGGCCGGTACGCGCCTTGCCAGACGCTTCACGCTCGTCGGGCATCTCGATACCCTGGTCGACCGCATTGCGCAcc                                                                                         >  2:1758782/1‑150 (MQ=255)
                                                           ggTCCATGCCCTTGCCGTCGTCCGAGATCGACAGCAGGATGTGGTTGCCTTCCTGTTCGGGCGACAGCCCTACGCGGCCGGTACGCGCCTTGCCAGGCGCTTCACGCTCGTCTGGCATCTCGATACCGTGGGCGGCCGCATTGCGCACCa                                                                                        >  2:2138194/1‑150 (MQ=255)
                                                           ggTCCATGCCCTTGCCGTCGTCCGAGATCGACAGCAGGATGTGGTCGCCTTCCTGTTCGGCCGACAGCACTACGCGGCCGGTACGCGCCTTGCCAGACGCTTCACGCTCGTCGGGCATCTCGATACCGTGGTCGACCGCATTGCGCACCa                                                                                        >  1:1755367/1‑150 (MQ=255)
                                                            gTCCCTGCCCTTGCCGTCGTCCGCCATCGACAGCAGGATGTGGTCGCCTTCCTGTTCGGCCGACAGCACTACGCGGCCGGTACGCGCCTTGCCAGACGCTTCACGCTCGTCGGGCATCTCGATACCGTGGTCGACCGCATTGCGCACCaa                                                                                       <  2:1946488/150‑1 (MQ=255)
                                                            gTCCATGCCCTTGCCGTCGTCCGAGATCGACAGCAGGATGTGGTCGCCTTCCTGTTCGGCCGACAGCACTACGCGGCCGGTACGCGCCTTGCCAGACGCTTCNCGCNCGNCGGGCATCTCGANACCGTGGTCGACCGCATTGCGCACCaa                                                                                       <  1:2138194/150‑1 (MQ=255)
                                                            gTCCATGCCCTTGCCGTCGTCCGAGATCGACAGCAGGATGTGGTCGCCTTCCTGTTCGGCCGACAGCACTACGCGGCCGGTACGCGCCTTGCCAGACGCTTCACGCTCGTCGGGCATCTCGATACCGTGGTCGACCGCATTGCGCACCaa                                                                                       <  1:1693875/150‑1 (MQ=255)
                                                             tCCATGCCCTTGCCGTCGTCCGAGATCGACAGCAGGATGTGGTCGCCTTCCTGTTCGGCCGACAGCACTACGCGGCCGGTACGCGCCTTGCCAGACGCTTCACGCTCGTCGGGCATCTCGATACCGTGGTCGACCGCATTGCGCACCAAg                                                                                      <  2:2385335/150‑1 (MQ=255)
                                                                aTGCCCTTGCCGTCGTCCGAGATCGACAGCAGGATGTGGTCGCCTTCCTGTTCGGCCGACAGCACTACGCGGCCGGTACGCGCCTTGCCAGACGCTTCACGCTCGTCGGGCATCTCGATACCGTGGTCGACCGCATTGCGCACCAAGTGc                                                                                   >  2:1098445/1‑150 (MQ=255)
                                                                 tGCCCTTGCCGTCGTCCGAGATCGACAGCAGGATGTGGTCGCCTTCCTGTTCGGCCGACAGCACTACGCGGCCGGTACGCGCCTTGCCAGACGCTTCACGCTCGTCGGGCATCTCGATACCGTGGTCGACCGCATTGCGCACCAAGTGCa                                                                                  >  1:1194831/1‑150 (MQ=255)
                                                                 tGCCCTTGCCGTCGTCCGAGATCGACAGCAGGATGTGGTCGCCTTCCTGTTCGGCCGACAGCACTACGCGGCCGGTACGCGCCTTGCCAGACGCTTCACGCTCGTCGGGCATCTCGATACCGTGGTCGACCGCATTGCGCACCAAGTGCa                                                                                  >  2:1245243/1‑150 (MQ=255)
                                                                  gCCCTTGCCGTCGTTCGAGATCGACAGCAGGATGTGGTCGCCTTCCTGTTCGGCCGACAGCACTACGCGGCCGGTACGCGCCTTGCCAGACGCTTCACGCTCGTCGGGCATCTCGATACCGTGGTCGACCGCATTGCGCACCAAGTGCAc                                                                                 <  1:1098445/150‑1 (MQ=255)
                                                                  gCCCTTGCCGTCGTCCGAGATCGACAGCAGGATGTGGTCGCCTTCCTGTTCGGCCGACAGCACTACGCGGCCGGTACGCGCCTTGTCAGACGCTTCACGCTCGTCGGGCATCTCGATACCGAAGTCGACCGCATTGCGCACCAAGTGCAc                                                                                 <  1:66185/150‑1 (MQ=255)
                                                                   cccTTGCCGTCGTCCGAGATCGACAGCAGGATGTGGTCGCCTTCCTGTTCGGCCGACAGCACTACGCGGCCGGTACGCGCCTTGCCAGACGCTTCACGCTCGTCGGGCATCTCGATACCGt                                                                                                             >  1:1265253/1‑121 (MQ=255)
                                                                   cccTTGCCGTCGTCCGAGATCGACAGCAGGATGTGGTCGCCTTCCTGTTCGGCCGACAGCACTACGCGGCCGGTACGCGCCTTGCCAGACGCTTCACGCTCGTCGGGCATCTCGATACCGt                                                                                                             <  2:1265253/121‑1 (MQ=255)
                                                                    ccTTGCCGTCGTCCGAGATCGACAGCAGGATGTGGTCGCCTTCCTGTTCGGCCGACAGCACTACGCGGCCGGTACGCGCCTTGCCAGACGCTTCACGCTCGTCGGGCATCTCGATACCGTGGTCGACCGCATTGCGCACCAAGTGCACCa                                                                               >  2:1795947/1‑150 (MQ=255)
                                                                        gCCGTCGTCCGAGATCGACAGCAGGATGTGGTCGCCTTCCTGTTCGGCCGACAGCACTACGCGGCCGGTACGCGCCTTGCCAGACGCTTCACGCTCGTCGGGCATCTCGATACCGTGGTCGACCGCATTGCGCACCAAGTGCACCAGCgg                                                                           >  2:724279/1‑150 (MQ=255)
                                                                          cgtcgtCCGAGATCGACAGCAGGATGTGGTCGCCTTCCTGTTCGGCCGACAGCACTACGCGGCCGGTACGCGCCTTGCCAGACGCt                                                                                                                                         >  1:1007837/1‑86 (MQ=255)
                                                                          cgtcgtCCGAGATCGACAGCAGGATGTGGTCGCCTTCCTGTTCGGCCGACAGCACTACGCGGCCGGTACGCGCCTTGCCAGACGCt                                                                                                                                         <  2:1007837/86‑1 (MQ=255)
                                                                               tcCGAGATCGACAGCAGGATGTGGTCGCCTTCCTGTTCGGCCGACAGCACTACGCGGCCGGTACGCGCCTTGCCAGACGCTTCACGCTCGTCGGGCATCTCGATACCGTGGTCGACCGCAtt                                                                                                <  2:1593559/122‑1 (MQ=255)
                                                                               tcCGAGATCGACAGCAGGATGTGGTCGCCTTCCTGTTCGGCCGACAGCACTACGCGGCCGGTACGCGCCTTGCCAGACGCTTCACGCTCGTCGGGCATCTCGATACCGTGGTCGACCGCAtt                                                                                                >  1:1593559/1‑122 (MQ=255)
                                                                                 cGATATCGGAAGCAGGATGTGGTCTCCTTCCTTGTCGCCCTACAGCACTTCGCGGATGGTGCTCGCCTTCCCAGACGCTTCACGCCCGTCGGTCATTTCGATACCGTGTTCGACCGCATTGCGCACCAAGTGCACCAGCGGGTCGGCCaa                                                                  <  2:334491/150‑1 (MQ=255)
                                                                                 cGAGATCGACAGCAGGATGTGGTCGCCTTCCTGTTCGGCCGACAGCACTACGCGGCCGGTACGCGCCTTGCCAGACGCTTCACGCTCGTCGGGCATCTCGATAACGCGGTCGACCGCATTGCGCACCAAGTGCACCAGCGGGTCGGCCaa                                                                  <  1:1758782/150‑1 (MQ=255)
                                                                                  gagaTCGACAGCAGGATGTGGTCGCCTTCCTGTTCGGCCGACAGCACTACGCGGCCGGTACGCGCCTTGCCAGACGCTTCACGCTCGTCGGGCATCTCGATACCGTGGTCGACCGCATTGCGCACCAAGTGCACCAGCGGGTCGGCCAAg                                                                 <  2:1105735/150‑1 (MQ=255)
                                                                                  gagaTCGACAGCAGGATGTGGTCGCCTTCCTGTTCGGCCGACAGCACTACGCGGCCGGTACGCGCCTTGCCAGACGCTTCACGCTCGTCGGGCATCTCGATACCGTGGTCGACCGCATTGCGCACCAAGTGCACCAGCGGGTCGGCCAAg                                                                 <  1:1973527/150‑1 (MQ=255)
                                                                                  gagaTCGACAGCAGGATGTGGTCGCCTTCCTGTTCGGCCGACAGCACTACGCGGCCGGTACGCGCCTTGCCAGACGCTTCACGCTCGTCGGGCATCTCGATACCGTGGTCGACCGCATTGCGCACCAAGTGCACCAGCGGGTCGGCCAAg                                                                 <  1:1767760/150‑1 (MQ=255)
                                                                                        gACAGCAGGATGTGGTCGCCTTCCTGTTCGGCCGACAGCACTACGCGGCCGGTACGCGCCTTGCCAGACGCTTCACGCTCGTCGGGCATCTCGATACCGTGGTCGACCGCATTGCGCACCAAGTGCACCAGCGGGTCGGCCAAGGCTTCt                                                           >  1:1190429/1‑150 (MQ=255)
                                                                                         aCAGCAGGATGTGGTCGCCTTCCTGTTCGGCCGACAGCACTACGCGGCCGGTACGCGCCTTGCCAGATGCTTCACGCTCGTCGGGCATCTCGATACCGTGGTCGACCGCATTg                                                                                               >  2:736641/1‑113 (MQ=255)
                                                                                         aCAGCAGGATGTGGTCGCCTTCCTGTTCGGCCGACAGCACTACGCGGCCGGTACGCGCCTTGCCAGATGCTTCACGCTCGTCGGGCATCTCGATACCGTGGTCGACCGCATTg                                                                                               <  1:736641/113‑1 (MQ=255)
                                                                                         aCAGCAGGATGTGGTCGCCTTCCTGTTCGGCCGACAGCACTACGCGGCCGGTACGCGCCTTGCCAGACGCTTCACGCTCGTCGGGCATCTCGAt                                                                                                                  <  1:889141/94‑1 (MQ=255)
                                                                                           agcagGATGTGGTCGCCTTCCTGTTCGGCCGACAGCACTACGCGGCCGGTACGCGCCTTGCCAGACGCTTCACGCTCGTCGGGCATCTCGATACCGTGGTCGACCGCATTGCGCACCAAGTGCACCAGCGGGTCGGCCAAGGCTTCTACg                                                        >  2:2149191/1‑150 (MQ=255)
                                                                                                 gccgacccgctggtgcacttggtgcgcaatgcggtcgaccacggtatcgagaTGCCAGACGCTTCACGCTCGTCggg                                                                                                                           <  2:1040135‑M1/25‑1 (MQ=255)
                                                                                                 gccgacccgctggtgcacttggtgcgcaatgcggtcgaccacggtatcgagaTGCCAGACGCTTCACGCTCGTCggg                                                                                                                           >  1:1040135‑M1/53‑77 (MQ=255)
                                                                                                 aTGTGGTCGCGTTACTGGTCGGCCGACAGCACTACGCGGCCGGTACGCGCCTTGCCAGACGCTTCACGCTCGTCGGGCATCTCGATACCGTGGTCGACCGCATTGCGCACCAAGTGCACCAGCGGGTCGGCCAAGGCTTCTACGAGGTTc                                                  <  2:62384/150‑1 (MQ=255)
                                                                                                   gtgGTCGCCTTCCTGTTCGGCCGACAGCACTACGCGGCCGGTACGCGCCTTGCCAGACGCTTCACGCTCGTCGGGCATCTCGATACCGTGGTCGACCGCATTGCGCACCAAGTGCACCAGCGGGTCGGCCAAGGCTTCTACGAGGTTCtt                                                <  2:681352/150‑1 (MQ=255)
                                                                                                   gtgGTCGCCTTCCTGTTCGGCCGACAGCACTACGCGGCCGGTACGCGCCTTGCCAGACGCTTCACGCTCGTCGGGCATCTCGATACCGTGGTCGACCGCATTGCGCACCAAGTGCACCAGCGGGTCGGCCAAGGCTTCTACGAGGTTCtt                                                >  1:681352/1‑150 (MQ=255)
                                                                                                   cgacccgctggtgcacttggtgcgcaatgcggtcgaccacggtatcgagaTGCCAGACGCTTCACGCTCGTCGGGCATCTCGATa                                                                                                                 <  2:1061897‑M1/35‑1 (MQ=255)
                                                                                                   cgacccgctggtgcacttggtgcgcaatgcggtcgaccacggtatcgagaTGCCAGACGCTTCACGCTCGTCGGGCATCTCGATa                                                                                                                 >  1:1061897‑M1/51‑85 (MQ=255)
                                                                                                     ggTCGCCTTCCTGTTCGGCCGACAGCACTACGCGGCCGGTACGCGCCTTGCCAGACGCTTCACGCTCGTCGGGCATCTCGATa                                                                                                                 >  1:452400/1‑83 (MQ=255)
                                                                                                     ggTCGCCTTCCTGTTCGGCCGACAGCACTACGCGGCCGGTACGCGCCTTGCCAGACGCTTCACGCTCGTCGGGCATCTCGATa                                                                                                                 <  2:452400/83‑1 (MQ=255)
                                                                                                          ccTTCCTGTTCGGCCGACAGCACTACGCGGCCGGTACGCGCCTTGCCAGACGCTTCACGCTCGTCGGGCATCTCGATACCGTGGTCGACCGCATTGCGCACCAAGTGCACCAGCGGGTCGGCCAAGGCTTCTACGAGGTTCTTGTCAAgg                                         <  1:1784958/150‑1 (MQ=255)
                                                                                                                       ccGACAGCACTACGCGGCCGGTACGCGCCTTGCCAGACGCTTCACGCTCGTCGGGCATCTCGATACCGTGGTCGACCGCATTGCGCACCAAGTGCACCAGCGGGTCGGCCAAGGCTTCTACGAGGTTCTTGTCAAGGTCGGTCTCTTCGc                            >  1:2045550/1‑150 (MQ=255)
                                                                                                                       ccGACAGCACTACGCGGCCGGTACGCGCCTTGCCAGACGCTTCACGCTCGTCGGGCATCTCGATACCGTGGTCGACCGCATTGCGCACCAAGTGCACCAGCGGGTCGGCCAAGGCTTCTACGAGGTTCTTGTCAAGGTCGGTCTCTTCGc                            <  2:445669/150‑1 (MQ=255)
                                                                                                                        cGACAGCACTACGCTGCCGGTACGCGCCTTGCCAGACGCTTCACGCTCGTCGGGCATCTCGATACCGTGGTCGACCGCATTGCGCACCAAGTGCACCAGCGGGTCGGCCAAGGCTTCTACGAGGTTCTTGTCAAGGTCGGTCTCTTCGcc                           <  1:1178391/150‑1 (MQ=255)
                                                                                                                        cGACAGCACTACGCGGCCGGTACGCGCCTTGCCAGACGCTTCACGCTCGTCGGGCATCTCGATACCGTGGTCGACCGCATTGCGCACCAAGTGCACCAGCGGGTCGGCCAAGGCTTCTACGAGGTTCTTGTCAAGGTCGGTCTCTTCGcc                           >  1:283583/1‑150 (MQ=255)
                                                                                                                         gACAGCACTACGCGGCCGGTACGCGCCTTGCCAGACGCTTCACGCTCGTCGGGCATCTCGATACCGTGGTCGACCGCATTGCGCACCAAGTGCACCAGCGGGTCGGCCAAGGCTTCTACGAGGTTCTTg                                               >  1:640075/1‑129 (MQ=255)
                                                                                                                         gACAGCACTACGCGGCCGGTACGCGCCTTGCCAGACGCTTCACGCTCGTCGGGCATCTCGATACCGTGGTCGACCGCATTGCGCACCAAGTGCACCAGCGGGTCGGCCAAGGCTTCTACGAGGTTCTTg                                               <  2:640075/129‑1 (MQ=255)
                                                                                                                           cAGCACTACGCGGCCGGTACGCGCCTTGCCAGACGCTTCACGCTCGTCGGGCATCTCGATACCGTGGTCGACCGCATTGCGCACCAAGTGCACCAGCGGGTCGGCCAAGGCTTCTACGAGGTTCTTGTCAAggtcggtc                                   >  1:2152375/1‑139 (MQ=255)
                                                                                                                           cAGCACTACGCGGCCGGTACGCGCCTTGCCAGACGCTTCACGCTCGTCGGGCATCTCGATACCGTGGTCGACCGCATTGCGCACCAAGTGCACCAGCGGGTCGGCCAAGGCTTCTACGAGGTTCTTGTCAAggtcggtc                                   <  2:2152375/139‑1 (MQ=255)
                                                                                                                            aGCACTACGCGGCCGGTACGCGCCTTGCCAGACGCTTCACGCTCGTCGGGCATCTCGATACCGTGGTCGACCGCATTGCGCACCAAGTGCACCAGCGGGTCGGCCAAGGCTTCTACGAGGTTCTTGTCAAGGTCGGTCTCTTCGCCGAcc                       >  2:2224467/1‑150 (MQ=255)
                                                                                                                              cACTACGCGGCCGGTACGCGCCTTGCCAGACGCTTCACGCTCGTCGGGCATCTCGATACCGTGGTCGACCGCATTGCGCACCAAGTGCACCAGCGGGTCGGCCAAGGCTTCTACGAGGTTCTTGTCAAGGTCGGTCTCTTCGCCGACCAg                     <  1:2274132/150‑1 (MQ=255)
                                                                                                                                 tACGCGGCCGGTACGCGCCTTGCCAGACGCTTCACGCTCGTCgg                                                                                                                            >  1:2338641/1‑44 (MQ=255)
                                                                                                                                 tACGCGGCCGGTACGCGCCTTGCCAGACGCTTCACGCTCGTCgg                                                                                                                            <  2:2338641/44‑1 (MQ=255)
                                                                                                                                 tACGCGGCCGGTACGCGCCTTGCCAGACGCTTCACGCTCGTCGGGCATCTCGATACCGTGGTCGAc                                                                                                      >  1:1033567/1‑66 (MQ=255)
                                                                                                                                 tACGCGGCCGGTACGCGCCTTGCCAGACGCTTCACGCTCGTCGGGCATCTCGATACCGTGGTCGAc                                                                                                      <  2:1033567/66‑1 (MQ=255)
                                                                                                                                 tACGCGGCCGGTACGCGCCTTGCCAGACGCTTCACGCTCGTCGGGCATCTCGATACCGTGGTCGACCGCATTGCGCACCAAGTGCACCAGCGGGTCGGCCAAGGCTTCTACGAGGTTCtt                                                <  2:1611504/120‑1 (MQ=255)
                                                                                                                                 tACGCGGCCGGTACGCGCCTTGCCAGACGCTTCACGCTCGTCGGGCATCTCGATACCGTGGTCGACCGCATTGCGCACCAAGTGCACCAGCGGGTCGGCCAAGGCTTCTACGAGGTTCtt                                                >  1:1611504/1‑120 (MQ=255)
                                                                                                                                   cgcgGCCGGTACGCGCCTTGCCAGACGCTTCACGCTCGTCGGGCATCTCGATACCGTGGTCGACCGCATTGCGCACCAAGTGCACCAGCGGGTCGGCCAAGGCTTCTACGAGGTTCTTGTCAAGGTCGGTCTCTTCGCCGACCAGTTCCa                <  1:522687/150‑1 (MQ=255)
                                                                                                                                            tACGCGCCTTGCCAGACGCTTCACGCTCGTCGGGCATCTCGATACCGTGGTCGACCGCATTGCGCACCAAGTGCACCAGCGGGTCGGCCAAGGCTTCTACGAGGTTCTTGTCAAGGTCGGTCTCTTCGCCGACCAGTTCCAGATTGAtct       <  1:1753216/150‑1 (MQ=255)
                                                                                                                                              cgcgCCTTGCCAGACGCTTCACGCTCGTCGGGCATCTCGATACCGTGGTCGACCGCATTGCGCACCAAGTGCACCAGCGGGTCGGCCAAGGCTTCTACGAGGTTCTTGTCAAGGTCGGTCTCTTCGCCGACCAGTTCCAGATTGATctct     <  1:724279/150‑1 (MQ=255)
                                                                                                                                              cgcgCCTTGCCAGACGCTTCACGCTCGTCGGGCATCTCGATACCGTGGTCGACCGCATTGCGCACCAAGTGCACCAGCGGGTCGGCCAAGGCTTCTACGAGGTTCTTGTCAAGGTCGGTCTCTTCGCCGACCAGTTCCAGATTGATctct     <  1:1425837/150‑1 (MQ=255)
                                                                                                                                               gcgcCTTGCCAGACGCTTCACGCTCGTCGGGCATCTCGATACCGTGGTCGACCGCATTGCGCACCAAGTGCACCAGCGGGTCGGCCAAGGCTTCTACGAGGTTCtt                                                >  1:1952315/1‑106 (MQ=255)
                                                                                                                                               gcgcCTTGCCAGACGCTTCACGCTCGTCGGGCATCTCGATACCGTGGTCGACCGCATTGCGCACCAAGTGCACCAGCGGGTCGGCCAAGGCTTCTACGAGGTTCtt                                                <  2:1952315/106‑1 (MQ=255)
                                                                                                                                               gcgcCTTGCCAGACGCTTCACGCTCGTCGGGCATCTCGATACCGTGGTCGACCGCATTGCGCACCAAGTGCACCAGCGGGTCGGCCAAGGCTTCTACGAGGTTCTTGTCAAGGTCGGTCTCTTCGCCGACCAGTTCCAGATTGATCtctt    <  2:462631/150‑1 (MQ=255)
                                                                                                                                                cgcCTTGCCAGACGCTTCACGCTCGTCGGGCATCTCGATACCGTGGTCGACCGCATTGCGCACCAAGTGCACCAGCGGGTCGGCCAAGGCTTCTACGAGGTTCTTGTCAAGGTCGGTCTCTTCGCCGACCAGTTCCAGATTGATCtcttt   <  2:376367/150‑1 (MQ=255)
                                                                                                                                                 gcCTTGCCAGACGCTTCACGCTCGTCGGGCATCTCGATACCGTGGTCGACCGCATTGCGCACCAAGTGCACCAGCGGGTCGGCCAAGGCTTCTACGAGGTTCTTGTCAAGGTCGGTCTCTTCGCCGACCAGTTCCAGATTGATCtctttc  <  2:313007/150‑1 (MQ=255)
                                                                                                                                                 gcCTTGCCAGACGCTTCACGCTCGTCGGGCATCTCGATACCGTGGTCGACCGCATTGCGCACCAAGTGCACCAGCGGGTCGGCCAAGGCTTCTACGAGGTTCTTGTCAAGGTCGGTCTCTTCGCCGACCAGTTCCAGATTGATCtctttc  >  1:71699/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                 
CTCGGCGGCGTCCTTGTCCATCAGGCCCTTTTCCACGGCCTTGGCGCGCAGGATGTTCGGGTCCATGCCCTTGCCGTCGTCCGAGATCGACAGCAGGATGTGGTCGCCTTCCTGTTCGGCCGACAGCACTACGCGGCCGGTACGCGCCTTGCCAGACGCTTCACGCTCGTCGGGCATCTCGATACCGTGGTCGACCGCATTGCGCACCAAGTGCACCAGCGGGTCGGCCAAGGCTTCTACGAGGTTCTTGTCAAGGTCGGTCTCTTCGCCGACCAGTTCCAGATTGATCTCTTTC  >  NC_002947/4928591‑4928885

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.