New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 5164490101 (1.140)8 (0.090) 8/236 NT 7.1% coding (3438/3906 nt) hrpA ATP‑dependent helicase HrpA
?NC_002947 = 5164525 112 (1.320)coding (3403/3906 nt) hrpA ATP‑dependent helicase HrpA

Only 100 of 137 total aligned reads displayed.

GGTACACCAGGTTGCCTAGCTGCTGCTTGATGTCGTTCAGTGCCACCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCTTCTACCCGCCCCATTTCACGGTACAGCA  >  NC_002947/5164342‑5164638
                                                                                                                                                    |                                                                                                                                                    
ggTACACCAGGTTGCCTAGCTGCTGCTTGATGTCGTTCAGTGCCACCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGccc                                                                                                                                                     <  1:1183082/150‑1 (MQ=255)
 gTACACCAGGTTGCCTAGCTGCTGCTTGATGTCGTTCAGTGCCACCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCa                                                                                                                                                    <  1:1996763/150‑1 (MQ=255)
     acCAGGTTGCCTAGCTGCTGCTTGATGTCGTTCAGTGCCACCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCa                                                                                                                                                    >  2:179054/1‑146 (MQ=255)
     acCAGGTTGCCTAGCTGCTGCTTGATGTCGTTCAGTGCCACCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCa                                                                                                                                                    <  1:179054/146‑1 (MQ=255)
      ccAGGTTGCCTAGCTGCTGCTTGATGTCGTTCAGTGCCACCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGc                                                                                                                                               >  1:1495235/1‑150 (MQ=255)
      ccAGGTTGCCTAGCTGCTGCTTGATGTCGTTCAGTGCCACCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGc                                                                                                                                               >  1:624666/1‑150 (MQ=255)
             gCCTAGCTGCTGCTTGATGTCGTTCAGTGCCACCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCtt                                                                                                                                        <  2:667644/150‑1 (MQ=255)
               cTAGCTGCTGCTTGATGTCGTTCAGTGCCACCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGc                                                                                                                                      <  2:624666/150‑1 (MQ=255)
               cTAGCTGCTGCTTGATGTCGTTCAGTGCCACCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGc                                                                                                                                      >  1:1389574/1‑150 (MQ=255)
                  gctgctgctTGATGTCGTTCAGTGCCACCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGtt                                                                                                                                   >  2:2158610/1‑150 (MQ=255)
                    tgctgctTGATGTCGTTCAGTGCCACCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTca                                                                                                                                 <  2:1983642/150‑1 (MQ=255)
                      ctgctTGATGTCGTTCAGTGCCACCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTcagc                                                                                                                               <  1:235452/150‑1 (MQ=255)
                         ctTGATGTCGTTCAGTGCCACCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGtt                                                                                                                                   <  2:2072171/143‑1 (MQ=255)
                          ttGATGTCGTTCAGTGCCACCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTcagccagc                                                                                                                           <  1:1916757/150‑1 (MQ=255)
                               gTCGTTCAGTGCCACCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTTCCAGGCGCTCGGCATGCTCGGCCcagctgccgcgctggctgaacgcaagcgcggc                                                                                                                      <  1:700134‑M1/150‑33 (MQ=255)
                                tCGTTCAGTGCCACCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCAAAACGCTCGGCATGCTCGGCCcagctgccgcgctggctgaacgcaagcgcggca                                                                                                                     <  1:1979105‑M1/150‑34 (MQ=255)
                                  gTTCAGTGCCACCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCCTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCaa                                                                                                                   >  2:1074951/1‑150 (MQ=255)
                                   ttCAGTGCCACCGCTTGGCTCAGGTCGGTCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGccgct                                                                                                                  <  1:739767/150‑4 (MQ=255)
                                     cAGTGCCCCCGTTTGGCCCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAggc                                                                                                                >  2:1266775‑M2/1‑147 (MQ=255)
                                     cAGTGCCACCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAggc                                                                                                                <  2:1441394‑M2/150‑4 (MQ=255)
                                       gTGCCACCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAggccg                                                                                                              <  1:1138160‑M2/150‑6 (MQ=255)
                                            aCCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCt                                                                                                         >  2:801391/1‑150 (MQ=255)
                                             ccGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCtt                                                                                                        >  2:1933921/1‑150 (MQ=255)
                                                      tCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGTACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCttggccgcgctggctgaacgcaagcgcggcagctgggccgagcatgccgagc                                                                                                  >  1:1939400‑M1/1‑95 (MQ=255)
                                                      tCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCg                                                                                                                                     >  1:1420626/1‑112 (MQ=255)
                                                      tCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCa                                                                                               >  2:640023/1‑150 (MQ=255)
                                                      tCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCa                                                                                               >  1:2239784/1‑150 (MQ=255)
                                                          gTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTTCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTGGCCCTGCGCGGCCAAGGCCGCACCTTCACGTGGCAACgg                                                                                           >  1:1331238/1‑150 (MQ=255)
                                                          gTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGt                                                                                                   <  1:2374979/142‑1 (MQ=255)
                                                           tCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGgt                                                                                          >  1:1992295/1‑150 (MQ=255)
                                                              aTCTTGCCCTTGAAGCGTGTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGgttgt                                                                                       >  1:433521/1‑150 (MQ=255)
                                                                    cccTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCt                                                                                 <  1:1074951/150‑1 (MQ=255)
                                                                       ttGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCa                                                                              >  2:270989/1‑150 (MQ=255)
                                                                        tGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCACGGTCTGCTTTGCCAGGCGCTCCGCATGCTCGGCCCGGCTGCCGCTCTTGCGTTCAGCCACCGCGTCCAAGGCCGCACCTTCACGTGGAAACGGTTGTTCGACTTCaa                                                                             <  2:904026/150‑1 (MQ=255)
                                                                        tGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTCCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCaa                                                                             <  1:1933921/150‑1 (MQ=255)
                                                                            gCGTTTCTGCAGACCATGCCACAGTTTCAGCACTTCCAGAGTCTGCTTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGAt                                                                         <  1:367795/150‑1 (MQ=255)
                                                                            gCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGAt                                                                         <  1:1803634/150‑1 (MQ=255)
                                                                               tttCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCTTGGCCGcgct                                                                                                          >  1:957156/1‑111 (MQ=255)
                                                                                   tGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCGAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTg                                                                  >  2:430666/1‑150 (MQ=255)
                                                                                     cAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTc                                                                >  1:552792/1‑150 (MQ=255)
                                                                                      aGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCcagcggccgcgctggctgaacgcaagcgcggcagctgg                                                                                                                <  1:1396951‑M1/101‑39 (MQ=255)
                                                                                          cATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAgcgc                                                                                                                         <  1:460128/88‑1 (MQ=255)
                                                                                          cATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAgcgc                                                                                                                         >  2:460128/1‑88 (MQ=255)
                                                                                              ccACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGc                                                       <  1:1441394/150‑1 (MQ=255)
                                                                                               cacaGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGcc                                                      >  1:2193440/1‑150 (MQ=255)
                                                                                                 caGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGCCCAAGGTCGCACCTCCACGTGTCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCcag                                                    >  2:241722/1‑150 (MQ=255)
                                                                                                  aGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCcagc                                                   <  2:1389574/150‑1 (MQ=255)
                                                                                                   gCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCcagca                                                  <  2:1681270/150‑1 (MQ=255)
                                                                                                     ttCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCttggccgcgctggctgaacgcaagcgcggcagctgggccgagcat                                                                                                         >  1:1071202‑M1/1‑48 (MQ=255)
                                                                                                      tCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGaa                                               <  1:2001262/150‑1 (MQ=255)
                                                                                                        aGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCCGATAATTCCTCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATg                                             >  2:1399074/1‑150 (MQ=255)
                                                                                                         gCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCtt                                                                                                                                        <  2:1974228/58‑1 (MQ=255)
                                                                                                         gCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCtt                                                                                                                                        >  1:1974228/1‑58 (MQ=255)
                                                                                                         gCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAggc                                                                                                                <  2:1915087‑M2/82‑4 (MQ=255)
                                                                                                         gCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAggc                                                                                                                >  1:1915087‑M2/1‑79 (MQ=255)
                                                                                                         gCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGt                                            >  2:939885/1‑150 (MQ=255)
                                                                                                          cACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTcag                                                                                                                                <  1:618046/65‑1 (MQ=255)
                                                                                                          cACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTc                                           >  1:1579828/1‑150 (MQ=255)
                                                                                                           aCTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAg                                                             >  1:1339660/1‑131 (MQ=255)
                                                                                                                    gTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCCgc                                 >  2:134670/1‑150 (MQ=255)
                                                                                                                    atCTGCCTTACCAGGCGCTCGGCATGCTCGGGCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAgc                                 >  2:1487372/2‑150 (MQ=255)
                                                                                                                       tGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCt                              >  1:936820/1‑150 (MQ=255)
                                                                                                                       tGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCt                              <  1:355425/150‑1 (MQ=255)
                                                                                                                         attggCCAAGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCTTc                            >  2:1802404/5‑150 (MQ=255)
                                                                                                                           ttGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCTTCTa                          >  2:1498402/1‑150 (MQ=255)
                                                                                                                             gCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAAt                                              <  1:1493823/128‑1 (MQ=255)
                                                                                                                             gCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAAt                                              >  2:1493823/1‑128 (MQ=255)
                                                                                                                              ccAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGTCCAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCTTCTAccc                       <  1:2295151/150‑1 (MQ=255)
                                                                                                                               cAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAgc                                 >  2:734205/1‑139 (MQ=255)
                                                                                                                               cAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAgc                                 <  1:734205/139‑1 (MQ=255)
                                                                                                                                 ggCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCTTCTACCCGcc                    >  2:787553/1‑150 (MQ=255)
                                                                                                                                    gcTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAggccgagcatgccgagcgcctggcaaggcagaccctggaagtactgaagctgtggcatggtctgcagaaacgcttcaagggcaagatcgacctga                    >  1:1939400‑M2/1‑52 (MQ=255)
                                                                                                                                    gcTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAggccgagcatgccgagcgcctggcaaggcagaccctggaagtactgaagctgtggcatggtctgcagaaacgcttcaagggcaagatcgacctga                    <  2:1939400‑M2/147‑96 (MQ=255)
                                                                                                                                    gcTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCTTCTACCCGCCCCa                 <  2:1579828/150‑1 (MQ=255)
                                                                                                                                      tCGGCATGCTCGGCCCAGCTGCCGCGCNTGCGTTCAGCCANCGCGGCNAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCTTCTACCCGCCCCAtt               >  1:2313296/1‑150 (MQ=255)
                                                                                                                                       cGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGc                                                                       <  1:1349391/93‑1 (MQ=255)
                                                                                                                                       cGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGc                                                                       >  2:1349391/1‑93 (MQ=255)
                                                                                                                                         gCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGa                                      <  1:147664/124‑1 (MQ=255)
                                                                                                                                          cATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAAt                                              >  2:339342/1‑115 (MQ=255)
                                                                                                                                          cATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAAt                                              <  1:339342/115‑1 (MQ=255)
                                                                                                                                          cATGCTCGGCCCAGCTGCCGCGATTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCTTCTACCCGCCCCATTTCAc           <  2:2313296/150‑1 (MQ=255)
                                                                                                                                           aTGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAggccgagcatgccgagcgcctggcaaggcagaccctggaagtgctgaa                                                                   >  1:1071202‑M2/1‑45 (MQ=255)
                                                                                                                                           aTGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAggccgagcatgccgagcgcctggcaaggcagaccctggaagtgctgaa                                                                   <  2:1071202‑M2/93‑49 (MQ=255)
                                                                                                                                           aTGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCcagca                                                  <  2:2314933/110‑1 (MQ=255)
                                                                                                                                            tGCTCGGCCCAGCTTCCCCCCTTGCTTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCTTCTACCCGCCCCATTTCACgg         <  2:1022018/150‑1 (MQ=255)
                                                                                                                                            tGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCTTCTACCCGCCCCATTTCACgg         >  1:2179179/1‑150 (MQ=255)
                                                                                                                                              cTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCTTCTACCCGCCCCATTTCACGGTa       >  2:1212716/1‑150 (MQ=255)
                                                                                                                                               tCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCTTCTACCCGCCCCATTTCACGGTAc      >  1:1624071/1‑150 (MQ=255)
                                                                                                                                                cGGCCttggccgcgctggctgaacgcaagcgcggcagctgggccgagcatgccgagcgcctggcaaggcagaccctggaagtgctgaagctgtggcatggtctgcagaaacgcttcaagggcaagatcgacctgagccaagcggtggcac     <  1:1138160‑M1/150‑146 (MQ=255)
                                                                                                                                                  gCCttggccgcgctggctgaacgcaagcgcggcagctgggccgagcatgccgagcgcctggcaaggcagaccctggaagtgctgaagctgtggcatggtctgcagaaacgcttcaagggcaagatcgacctgggccaaacgggggcactg   >  2:1266775‑M1/1‑3 (MQ=255)
                                                                                                                                                  gCCttggccgcgctggctgaacgcaagcgcggcagctgggccgagcatgccgagcgcctggcaaggcagaccctggaagtgctgaagctgtggcatggtctgcagaaacgcttcaagggcaagatcgacctgagccaagcggtggcactg   <  2:1441394‑M1/150‑148 (MQ=255)
                                                                                                                                                  gCCttggccgcgctggctgaacgcaagcgcggcagctgggccgagcatgccgagcgcctggcaaggcagaccctggaagtgc                                                                       <  2:1915087‑M1/82‑80 (MQ=255)
                                                                                                                                                  gCCttggccgcgctggctgaacgcaagcgcggcagctgggccgagcatgccgagcgcctggcaaggcagaccctggaagtgc                                                                       >  1:1915087‑M1/1‑3 (MQ=255)
                                                                                                                                                    ccAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCGCtgggccgagcatgccgagcgcctggcaaggcagaccctggaagtgctgaagctgtggcatggtct                                                  >  2:1396951‑M2/1‑36 (MQ=255)
                                                                                                                                                    ccAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGAt                                                                         >  1:2347536/1‑78 (MQ=255)
                                                                                                                                                    ccAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGAt                                                                         <  2:2347536/78‑1 (MQ=255)
                                                                                                                                                    ccAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCaa                                                                     <  1:1448508/82‑1 (MQ=255)
                                                                                                                                                    ccAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCaa                                                                     >  2:1448508/1‑82 (MQ=255)
                                                                                                                                                    ccAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCTTCTACCCGCCCCATTTCa            >  2:1767147/1‑139 (MQ=255)
                                                                                                                                                    ccAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCTTCTACCCGCCCCATTTCa            <  1:1767147/139‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
GGTACACCAGGTTGCCTAGCTGCTGCTTGATGTCGTTCAGTGCCACCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCTTCTACCCGCCCCATTTCACGGTACAGCA  >  NC_002947/5164342‑5164638

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.