New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5653264 =101 (1.140)10 (0.120) 8/234 NT 10.0% coding (99/252 nt) PP_4962 hypothetical protein
?NC_002947 5653301 = 84 (1.000)coding (62/252 nt) PP_4962 hypothetical protein

Only 100 of 133 total aligned reads displayed.

GGGCAACCCGGCGCCTTGCGCTGGTGGTCTTCGTCGTACTTTTCCAGGCCTTCCGGGCCCACGCGCTTGCCGATGACCGGCACAGTCTCGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAATTGCCACAGCTGGCAGGACCTTGCC  >  NC_002947/5653115‑5653412
                                                                                                                                                     |                                                                                                                                                    
gggCAACCCGGCGCCTTGCGCTGGTGGTCTTCGTCGTACTTTTCCAGGCCTTCCGGGCCCACGCGCTTGCCGATGACCGGCACAGTCTCGGCCTGCCAGTCGGACTGAGAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAg                                                                                                                                                      >  2:1652405/1‑150 (MQ=255)
gggCAACCCGGCGCCTTGCGCTGGTGGTCTTCGTCGTACTTTTCCAGGCCTTCCGGGCCCACGCGCTTGCCGATGACCGGCACAGTCTCGGCCTGACGGGCCTGCTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAg                                                                                                                                                      >  2:64890/1‑150 (MQ=255)
 tctaccggtggtggcgccttcctcgagttcgtcgagggcaaggtcctgccagctttggcaattctggaagagcgggccaaggcctgatgacgtcggcgcttggcaaagggagtgccctggtggtcaaacaattgcctgtgatgatgctgg                                                                                                                                                     >  1:12483‑M1/149‑150 (MQ=255)
 tctaccggtggtggcgccttcctcgagttcgtcgagggcaaggtcctgccagctgtggcaattctggaagagcgggccaaggcctgatgacgtcggcgcttggcaaagggagtgccctggtggtcaaacaattgcctgtgatgatgctgg                                                                                                                                                     <  2:279261‑M1/2‑1 (MQ=255)
   taccggtggtggcgccttcctcgagttcgtcgagggcaaggtcctgccagctgtggcaattctggaagagcgggccaaggcctgatgacgtcggcgcttggcaaagggagtgccctggtggtcaaacaattgcctgtgatgatgctGGcc                                                                                                                                                   <  2:1894717‑M1/4‑1 (MQ=255)
   taccggtggtggcgccttcctcgagttcgtcgagggcaaggtcctgccagctgtggcaattctggaagagcgggccaaggcctgatgacgtcggcgcttggcaaagggagtgccctggtggtcaaacaattgcctgtgatgatgctGGcc                                                                                                                                                   <  1:848458‑M1/4‑1 (MQ=255)
    aaCCCGGCGCCTTGCGCTGGTGGTCTTCGTCGTACTTTTCCAGGCCTTCCGGGCCCACGCGCTTGCCGATGACCGGCACAGTCTCGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCg                                                                                                                                                  <  2:1372448/150‑1 (MQ=255)
     ccggtggtggcgccttcctcgagttcgtcgagggcaaggtcctgccagctgtggcaattctggaagagcgggccaaggcctgatgacgtcggcgcttggcaaagggagtgccctggtggtcaaacaattgcctgtgatgatgctGGCCgg                                                                                                                                                 >  1:1145857‑M1/145‑150 (MQ=255)
      cccGGCCCCTTGCGCGCGTGGTCTTCGTCGTACTTTCCCCGGCCTTCCGGGCCCACGGGCTTGCCGATGACCGGCACAGTCTCGGCCTGCCAGTCGGACTGATAGCTACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCggg                                                                                                                                                <  1:1878138/150‑1 (MQ=255)
       ccGGCGCCTTGCGCTGGTGGTCTTCGTCGTACTTTTCCAGGCCTTCCGGGCCCACGCGCTTGCCGATGACCGGCACAGTCTCGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGc                                                                                                                                               <  1:2216196/150‑1 (MQ=255)
          gcgcCTTGCGCTGGTGGTCTTCGTCGTACTTTTCCAGGCCTTCCGGGCCCACGCGCTTGCCGATGACCGGCACAGTCTCGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGc                                                                                                                                            <  1:2037287/150‑1 (MQ=255)
             ccTTGCGCTGGTGGTCTTCGTCGTACTTTTCCAGGCCTTCCGGGCCCACGCGCTTGCCGATGACCGGCACAGTCTCGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCcg                                                                                                                                         >  1:1471071/1‑150 (MQ=255)
                gccttcctcgagttcgtcgagggcaaggtcctgccagctgtggcaattctggaagagcgggccaaggcctgatgacgtcggcgcttggcaaagggagtgccctggtggtcaaacaattgcctgtgatgatgctGGCCGGGCTGCCCgcgc                                                                                                                                      <  1:104173‑M1/17‑1 (MQ=255)
                   gcTGGTGGTCTTCGTCGTACTTTTCCAGGCCTTCCGGGCCCACGCGCTTGCCGATGACCGGCACAGTCTCGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAg                                                                                                                                   <  2:2287636/150‑1 (MQ=255)
                       gtggtCTTCGTCGTACTTTTCCAGGCCTTCCGGGCCCACGCGCTTGCCGATGACCGGCACAGTCTCGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAgcgcc                                                                                                                               >  2:561834/1‑149 (MQ=255)
                        tggtCTTCGTCGTACTTTTCCAGGCCTTCCGGGCCCACGCGCTTGCCGATGACCGGCACAGTCTCGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTc                                                                                                                              >  1:17008/1‑150 (MQ=255)
                         ggtCTTCGTCGTACTTTTCCAGGCCTTCCGGGCCCACGCGCTTGCCGATGACCGGCACAGTCTCGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTca                                                                                                                             <  1:775439/150‑1 (MQ=255)
                         ggtCTTCGTCGTACTTTTCCAGGCCTTCCGGGCCCACGCGCTTGCAGCTAACCTGCACAGTCTCGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTca                                                                                                                             <  1:760354/150‑1 (MQ=255)
                         ggtCTTCGTCGTACTTTTCCACGCCTTCCGGGCCCACGCGCTTGCCGATGACCGGCACAGTCTCGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCCGCCCGCGCAAGCGCTca                                                                                                                             <  2:1239028/150‑1 (MQ=255)
                          gtCTTCGTCGTACTTTTCCAGGCCTTCCGGGCCACCGGACTTGCCGATGACCGGCACAGTCTCGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTcag                                                                                                                            >  1:1172197/1‑150 (MQ=255)
                             ttCGTCGTACTTTTCCAGGCCTTCCGGGCCCACGCGCTTGCCGATGACCGGCACAGTCTCGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTcagcag                                                                                                                         >  1:667339/1‑150 (MQ=255)
                               cgtcgtACTTTTCCAGGCCTTCCGGGCCCACGCGCTTGCCGATGCTCGGCACAGTATCGGTCTACCTGTCGGACTGATGGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGAc                                                                                                                       <  2:1477201/150‑1 (MQ=255)
                                 tcgtACTTTTCCAGGCCTTCCGGGCCCACGCGCTTGCCGATGACCGGCACAGTCTCGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCg                                                                                                                     <  2:1639832/150‑1 (MQ=255)
                                 cgagggcaaggtcctgccagctgtggcaattctggaagagcgggccaaggcctgatgacgtcggcgcttggcaaagggagtgccctggtggtcaaacaattgcctgtgatgatgctGGCCGGGCTGCCTGCGCAAGCGCTAAGCAGACCg                                                                                                                     >  1:1601492‑M1/117‑150 (MQ=255)
                                 cgagggcaaggtcctgccagctgtggcaattctggaagagcgggccaaggcctgatgacgtcggcgcttggcaaagggagtgccctggtggtcaaacaattgcctgtgatgatgctGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCg                                                                                                                     >  1:279261‑M1/117‑150 (MQ=255)
                                  gagggcaaggtcctgccagctgtggcaattctggaagagcgggccaaggcctgatgacgtcggcgcttggcaaagggagtgccctggtggtcaaacaattgcctgtgatgatgctGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCgg                                                                                                                    >  2:104173‑M1/116‑150 (MQ=255)
                                   gtACTTTTCCAGGCCTTCCGGGCCCACGCGCTTGCCGATGACCGGCACAGTCTCGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGc                                                                                                                   >  1:718856/1‑150 (MQ=255)
                                    tACTTTTCCAGGCCTTCCGGGCCCACGCGCTTGCCGATGACCGGCACAGTCTCGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGcc                                                                                                                  <  2:543786/150‑1 (MQ=255)
                                    tACTTTTCCAGGCCTTCCGGGCCCACGCGCTTGCCGATGACCGGCACAGTCTCGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGcc                                                                                                                  >  1:548295/1‑150 (MQ=255)
                                       ttttCCAGGCCTTCCGGGCCCACGCGCTTGCCGATGACCGGCACAGTCTCGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGc                                                                                                               >  2:17776/1‑150 (MQ=255)
                                       ttttCCAGGCCTTCCGGGCCCACGCGCTTGCCGATGACCGGCACAGTCTCGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGc                                                                                                               >  2:1925010/1‑150 (MQ=255)
                                       ttttCCAGGCCTTCCGGGCCCACGCGCTTGCCGATGACCGGCACAGTCTCGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGc                                                                                                               <  1:662180/150‑1 (MQ=255)
                                        tttCCAGGCCTTCCGGGCCCACGCGCTTGCCGATGACCGGCACAGTCTCGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGca                                                                                                              <  2:718856/150‑1 (MQ=255)
                                          tCCAGGCCTTCCGGGCCCACGCGCTTGCCGATGACCGGCACAGTCTCGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGcatc                                                                                                            <  1:2347581/150‑1 (MQ=255)
                                            cAGGCCTTCCGGGCCCACGCGCTTGCCGATGACCGGCACAGTCTCGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCg                                                                                                                                                  >  2:1518726/1‑110 (MQ=255)
                                            cAGGCCTTCCGGGCCCACGCGCTTGCCGATGACCGGCACAGTCTCGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCg                                                                                                                     <  1:121209/139‑1 (MQ=255)
                                            cAGGCCTTCCGGGCCCACGCGCTTGCCGATGACCGGCACAGTCTCGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCg                                                                                                                     >  2:121209/1‑139 (MQ=255)
                                             aGGCCTTCCGGGCCCACGCGCTTGCCGATGACCGGCACAGTCTCGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGAc                                                                                                                       >  1:940896/1‑136 (MQ=255)
                                             aGGCCTTCCGGGCCCACGCGCTTGCCGATGACCGGCACAGTCTCGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGAc                                                                                                                       <  2:940896/136‑1 (MQ=255)
                                                  ttCCGGGCCCACGCGCTTGCCGATGACCGGCACAGTCTCGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAgg                                                                                                    >  1:388976/1‑150 (MQ=255)
                                                   tCCGGGCCCACGCTCTTGCCGATGACCGGCACAGTCTCGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGc                                                                                                   <  2:2352113/150‑1 (MQ=255)
                                                   agctgtggcaattctggaagagcgggccaaggcctgatgacgtcggcgcttggcaaagggagtgccctggtggtcaaacaattgcctgtgatgatgctGGCCGGGCTGCCCGCGCAAGCGCTca                                                                                                                             >  2:1756841‑M1/99‑124 (MQ=255)
                                                           cACGCGCTTGCCGATGACCGGCACAGTCTCGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGttt                                                                                           <  1:1959742/150‑1 (MQ=255)
                                                           cACGCGCTTGCCGATGACCGGCACAGTCTCGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGttt                                                                                           <  2:2032481/150‑1 (MQ=255)
                                                           cACGCGCTTGCCGATGACCGGCACAGTCTCGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGGGCGACTGCGCCGGGGCGGCATCCGAGGCCGGGCTGCCCGCGCTAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGttt                                                                                           <  2:1095997/150‑1 (MQ=255)
                                                            aCGCGCTTGCCGATGACCGGCACAGTCTCGGCGTGGCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTg                                                                                          <  2:1172197/150‑1 (MQ=255)
                                                            aCGCGCTTGCCGATGACCGGCACAGTCTCGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTg                                                                                          >  1:1594299/1‑150 (MQ=255)
                                                             cgcgCTTGCCGATGACCGGCACAGTCTCGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCATTTGTTTGa                                                                                         >  1:1673239/1‑150 (MQ=255)
                                                                gcTTGCCGATGACCGGCACAGTCTCGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGacca                                                                                      >  1:2191378/1‑150 (MQ=255)
                                                                gcTTGCCGATGACCGGCACAGTCTCGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGacca                                                                                      >  2:2355194/1‑150 (MQ=255)
                                                                      cgaagACCGGCACAGTCTCGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAggg                                                                                <  2:1274828/146‑1 (MQ=255)
                                                                      cGATGACCGGCACAGTCTCGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAggg                                                                                >  2:79133/1‑150 (MQ=255)
                                                                               gCACAGTCTCGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTccc                                                                         >  2:1380793/1‑148 (MQ=255)
                                                                               gCACAGTCTCGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTccc                                                                         <  1:1380793/148‑1 (MQ=255)
                                                                                     tctcGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCaa                                                                 >  2:226156/1‑150 (MQ=255)
                                                                                       tcGGCCTGCCAGTCGGACTGGTAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCATTTGTTTGACCACCAGGGCACTCCCTTTGCCAAgc                                                               <  2:1673239/150‑1 (MQ=255)
                                                                                       tcGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAgc                                                               <  2:1594299/150‑1 (MQ=255)
                                                                                       tcGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAgc                                                               >  1:1128558/1‑150 (MQ=255)
                                                                                        cGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAgcg                                                              >  1:1867937/1‑150 (MQ=255)
                                                                                          gCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGcc                                                            <  2:2191378/150‑1 (MQ=255)
                                                                                                cAGTCGGACTGATAGCAACCGCGCTTGTGCGACTGCGCCGGGTGGGCATGCGAGGCCGTGCTTTCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACAAGGGCACTCCCTTTGCCAAGCTCCGACGtc                                                      <  2:1353244/150‑1 (MQ=255)
                                                                                                      gACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAgg                                                >  2:2289061/1‑150 (MQ=255)
                                                                                                       aCTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGc                                               <  2:17008/150‑1 (MQ=255)
                                                                                                        cTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGcc                                              <  1:727977/150‑1 (MQ=255)
                                                                                                         tGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGttt                                                                                           <  2:1433081/104‑1 (MQ=255)
                                                                                                         tGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGttt                                                                                           >  1:1433081/1‑104 (MQ=255)
                                                                                                         tGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCt                                             >  2:698062/1‑150 (MQ=255)
                                                                                                           aTAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTg                                           >  1:989597/1‑150 (MQ=255)
                                                                                                            tAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTgg                                          >  1:938872/1‑150 (MQ=255)
                                                                                                               cAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGccc                                       <  1:2289152/150‑1 (MQ=255)
                                                                                                                 aCCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCg                                                                                                                                                  <  1:2226329/41‑1 (MQ=255)
                                                                                                                   cGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGctc                                   >  1:1243816/1‑150 (MQ=255)
                                                                                                                    gCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCCGGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGctct                                  >  1:1979887/1‑150 (MQ=255)
                                                                                                                     cccTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCtt                                 <  2:939675/150‑1 (MQ=255)
                                                                                                                      ccTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTc                                <  1:1178040/150‑1 (MQ=255)
                                                                                                                        ttGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTg                                           >  1:1615886/1‑137 (MQ=255)
                                                                                                                        ttGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGCCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTg                                           <  2:1615886/137‑1 (MQ=255)
                                                                                                                             cggttGCGCCGGGTCGGCATCCGAGGCCGGGCTGCGCGCGCAAGCGCTCAGCAGAGCGGCCAGCATCATCACAGGCAATTGTTTGACCACTAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAAtt                         <  1:1794656/146‑1 (MQ=255)
                                                                                                                             cGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAAtt                         <  2:1867937/150‑1 (MQ=255)
                                                                                                                             cGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAAtt                         <  2:388976/150‑1 (MQ=255)
                                                                                                                                  gcgcCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCGCACCGTGGCCCGCTCTTCCAGAATTGCcac                    <  1:64890/150‑1 (MQ=255)
                                                                                                                                   attgcctgtgatgatgctGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGAcc                                                                                                                      >  2:1737710‑M1/19‑51 (MQ=255)
                                                                                                                                   attgcctgtgatgatgctGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGAcc                                                                                                                      <  1:1737710‑M1/33‑1 (MQ=255)
                                                                                                                                    gcCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGAc                                                         >  2:810817/1‑111 (MQ=255)
                                                                                                                                    gcCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGAc                                                         <  1:810817/111‑1 (MQ=255)
                                                                                                                                    gcCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAATTGCCACAg                  >  2:818083/1‑150 (MQ=255)
                                                                                                                                       cctgtgatgatgctGGCCGGGCTGCCCGCGCAAGCGCTca                                                                                                                             >  2:2153609‑M1/15‑40 (MQ=255)
                                                                                                                                        ggTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAATTGCCACAGCTgg              <  2:938872/150‑1 (MQ=255)
                                                                                                                                          tCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAATTGCCACAGCt                <  1:1138229/146‑1 (MQ=255)
                                                                                                                                          tCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAATTGCCACAGCt                >  2:1138229/1‑146 (MQ=255)
                                                                                                                                          tCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAATTGCCACAGCTGGCa            >  1:556701/1‑150 (MQ=255)
                                                                                                                                           cGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAATTGCCACAGCTGGCAg           <  1:2355194/150‑1 (MQ=255)
                                                                                                                                            ggCACCCGAGGCCAGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAATTGCCACAGCTGGCAgg          >  2:477317/1‑150 (MQ=255)
                                                                                                                                             gCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCg                                                           >  2:483544/1‑100 (MQ=255)
                                                                                                                                                  cGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAATTGCCACAGCTGGCAGGACCTTg    <  1:79133/150‑1 (MQ=255)
                                                                                                                                                   gAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAATTGCCACAGCTGGCAGGACCTTGc   <  1:516817/150‑1 (MQ=255)
                                                                                                                                                    aGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCTCCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAATTGCCACAGCTGGCAGGACCTTGcc  >  1:262426/1‑150 (MQ=255)
                                                                                                                                                    aGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTgg                                          >  2:712375/1‑110 (MQ=255)
                                                                                                                                                    aGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTgg                                          <  1:712375/110‑1 (MQ=255)
                                                                                                                                                    aGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAATTGCCACAGCTGGCAGGACCTTGcc  <  1:1275670/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                    
GGGCAACCCGGCGCCTTGCGCTGGTGGTCTTCGTCGTACTTTTCCAGGCCTTCCGGGCCCACGCGCTTGCCGATGACCGGCACAGTCTCGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAATTGCCACAGCTGGCAGGACCTTGCC  >  NC_002947/5653115‑5653412

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.