New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5998147 =	85 (0.960)	6 (0.070)	5/244	NT	6.4%	coding (338/339 nt)	PP_5254	hypothetical protein
	?	NC_002947	5998177 =	91 (1.040)					coding (308/339 nt)	PP_5254	hypothetical protein

CCACATGTCGGCATCCAGCGGCCAGCCGTGGCTGAACAGCACGGGCTTGCCGCTGCCCCAGTCCTTGAAATAGATCGAAGTGCCATCGCGGGTAACGAACGTGCTCATAGCGGTATCTCCTTGAAAGTGTCGAGATGAAGGCGTCGGCTCAGCCGC‑GCAGCCAGTTGGC‑GCAGCGGCGGGTTACCCAAGGCATGATGTAGAACACCACGGGCAGGATGACGAACAGGTTGACGATCAGGTTGCCGGTAATCACGCCGCCCAGCTGCGGGAAGCGCGCAAACAGCGGCGCCAGCAGTTG  >  NC_002947/5997998‑5998295                                                                                                                                                      |                                                                                                                                                       gtgatctgcccgatgaccatggtcatcccgcaactgctggcgccgctgtttgcgcgcttcccgcagctgggcggcgtgattaccggcaacctgatcgtcaacctgttcgtcatcctgcccgtggtgttctacatcatgccttgggtaacc                                                                                                                                                        >  1:820441‑M1/150‑150 (MQ=255)          ggCATCCAGCGGCCAGCCGTGGCTGAACAGCACGGGCTTGCCGCTGCCCCAGTCCTTGAAATAGATCGAAGTGCCATCGCGGGTAACGAACGTGCTCATAGCGGTATCTCCTTGAAAGTGTCGAGATGAAGGCGTCGGCTCAGCCGC‑GCa                                                                                                                                              >  1:1699266/1‑150 (MQ=255)              tCCAGCGGCCAGCCGTGGCTGAACAGCACGGGCTTGCCGCTGCCCCAGTCCTTGAAATAGATCGAAGTGCCATCGCGGGTAACGAACGTGCTCATAGCGGTATCTCCTTGAAAGTGTCGAGATGAAGGCGTCGGCTCAGCCGC‑GCAGCCa                                                                                                                                          <  2:1774804/150‑1 (MQ=255)                cAGCGGCCAGCCGTGGCTGAACAGCACGGGCTTGCCGCTGCCCCAGTCCTTGAAATAGATCGAAGTGCCATCGCGGGTAACGAACGTGCTCATAGCGGTATCTCCTTGAAAGTGTCGAGATGAAGGCGTCGGCTCAGCCGC‑GCAGc                                                                                                                                            >  2:538861/1‑146 (MQ=255)                cAGCGGCCAGCCGTGGCTGAACAGCACGGGCTTGCCGCTGCCCCAGTCCTTGAAATAGATCGAAGTGCCATCGCGGGTAACGAACGTGCTCATAGCGGTATCTCCTTGAAAGTGTCGAGATGAAGGCGTCGGCTCAGCCGC‑GCAGc                                                                                                                                            <  1:538861/146‑1 (MQ=255)                  gCGGCCAGCCGTGGCTGAACAGCACGGGCTTGCCGCTGCCCCAGTCCTTGAAATAGATCGAAGTGCCATCGCGGGTAACGAACGTGCTCATAGCGGTATCTCCTTGAAAGTGTCGAGATGAAGGCGTCGGCTCAGCCGC‑GCAGCCAGTTg                                                                                                                                      >  1:1481467/1‑150 (MQ=255)                      ccAGCCGTGGCTGAACAGCACGGGCTTGCCGCTGCCCCAGTCCTTGAAATAGATCGAAGTGCCATCGCGGGTAACGAACGTGCTCATAGCGGTATCTCCTTGAAAGTGTCGAGATGAAGGCGTCGGCTCAGCCGC‑GCAGCCAGTTGgc‑gc                                                                                                                                 >  1:305344/1‑150 (MQ=255)                       cAGCCGTGGCTGAACAGCACGGGCTTGCCGCTGCCCCAGTCCTTGAAATAGATCGAAGTGCCATCGCGGGTAACGAACGTGCTCATAGCGGTATCTCCTTGAAAGTGTCGAGATGAAGGCGTCGGCTCAGCCGC‑GCAGCCAGTTGGC‑GCa                                                                                                                                >  1:556432/1‑150 (MQ=255)                              ggCTGAACAGCACGGGCTTGCCGCTGCCCCAGTCCTTGAAATAGATCGAAGTGCCATCGCGGGTAACGAACGTGCTCATAGCGGTATCTCCTTGAAAGTGTCGAGATGAAGGCGTCGGCTCAGCCGC‑GCAGCCAGTTGGC‑GCAGcggcgg                                                                                                                         <  2:1813942/150‑1 (MQ=255)                              gcaactgctggcgccgctgtttgcgcgcttcccgcagctgggcggcgtgattaccggcaacctgatcgtcaacctgttcgtcatcctgcccgtggtgttctacatcatgccttgggtaacCCGCCGC‑GCAGCCAGTTGGC‑GCAGcggcgg                                                                                                                         >  2:2350850‑M1/121‑150 (MQ=255)                              gcaactgctggcgccgctgtttgcgcgcttcccgcagctgggcggcgtgattaccggcaacctgatcgtcaacctgttcgtcatcctgcccgtggtgttctacatcatgccttgggtaacCCGCCGC‑GCAGCCAGTTGGC‑GCAGcggcgg                                                                                                                         >  1:1281879‑M1/121‑150 (MQ=255)                                cTGAACAGCACGGGCTTGCCGCTGCCCCAGTCCTTGAAATAGATCGAAGTGCCATCGCGGGTAACGAACGTGCTCGTAGCGGTATCTCCTTGAAAGTGTCGAGATGAAGGCGTCGGCTCAGCCGC‑GCAGCCAGTTGGC‑GCAGCGGCGGGt                                                                                                                       <  2:2337453/150‑1 (MQ=255)                                cTGAACAGCACGGGCTTGCCGCTGCCCCAGTCCTTGAAATAGATCGAAGTGCCATCGCGGGTAACGAACGTGCTCATAGCGGTATCTCCTTGAAAGTGTCGAGATGAAGGCGTCGGCTCAGCCGC‑GCAGCCAGTTGGC‑GCAGCGGCGGGt                                                                                                                       >  1:1443306/1‑150 (MQ=255)                                 tGAACAGCACGGGCTTGCCGCTGCCCCAGTCCTTGAAATAGATCGAAGTGCCATCGCGGGTAACGAACGTGCTCATAGCGGTATCTCCTTGAAAGTGTCGAGATGAAGGCGTCGGCTCAGCCGC‑GCAGCCAGTTGGC‑GCAGCGGCGGGtt                                                                                                                      >  1:2348579/1‑150 (MQ=255)                                 tGAACAGCACGGGCTTGCCGCTGCCCCAGTCCTTGAAATAGATCGAAGTGCCATCGCGGGTAACGAACGTGCTCATAGCGGTATCTCCTTGAAAGTGTCGAGATGAAGGCGTCGGCTCAGCCGC‑GCAGCCAGTTGGC‑GCAGCGGCGGGtt                                                                                                                      <  1:2376685/150‑1 (MQ=255)                                    aCAGCACGGGCTTGCCGCTGCCCCAGTCCTTGAAATAGATCGAAGTGCCATCGCGGGTAACGAACGTGCTCATAGCGGTATCTCCTTGAAAGTGTCGAGATGAAGGCGTCGGCTCAGCCGC‑GCAGCCAGTTGGC‑GCAGCGGCGGGTTAcc                                                                                                                   <  2:183126/150‑1 (MQ=255)                                       gCACGGGCTTGCCGCTGCCCCAGTCCTTGAAATAGATCGAAGTGCCATCGCGGGTAACGAACGTGCTCATAGCGGTATCTCCTTGAAAGTGTCGAGATGAAGGCGTCGGCTCAGCCGC‑GCAGCCAGTTGGC‑GCCGCGGCGGGTTAcacat                                                                                                                <  2:1844101/150‑2 (MQ=255)                                         aCGGGCTTGCCGCTGCCCCAGTCCTTGAAATAGATCGAAGTGCCATCGCGGGTAACGAACGTGCTCATAGCGGTATCTCCTTGAAAGTGTCGAGATGAAGGCGTCGGCTCAGCCGC‑GCAGCCAGTTGGC‑GCAGCGGCGGGTTACCCAAgg                                                                                                              <  1:404729/150‑1 (MQ=255)                                           gggCTTGCCGCTGCCCCAGTCCTTGAAATAGATCGAAGTGCCATCGCGGGTAACGAACGTGCTCATAGCGGTATCTCCTTGAAAGTGTCGAGATGAAGGCGTCGGCTCAGCCGC‑GCAGCCAGTTGGC‑GCAGCGGCGGGTTACCCAAGGCa                                                                                                            <  2:2114929/150‑1 (MQ=255)                                            ggCTTGCCGCTGCCCCAGTCCTTGAAATAGATCGAAGTGCCATCGCGGGTAACGAACGTGCTCATAGCGGTATCTCCTTGAAAGTGTCGAGATGAAGGCGTCGGCTCAGCCGC‑GCAGCCAGTTGGC‑GCAGCGGCGGGTTACCCAAGGCat                                                                                                           <  2:556432/150‑1 (MQ=255)                                            ggCTAGCTGCTGCCCCAGTCCTTGAAATAGATCGAAGTGCCATCGCGGGTAACGAACGTGCTCATAGCGGTATCTCCTTGAAAGTGTCGAGATGAAGGCGTCGGCTCAGCCGC‑GCAGCCAGTTGGC‑GCAGCGGCGGGTTACCCAAGGCat                                                                                                           >  2:1800018/1‑150 (MQ=255)                                              cTTGCCGCTGCCCCAGTCCTTGAAATAGATCGAAGTGCCATCGCGGGTAACGAACGTGCTCATAGCGGTATCTCCTTGAAAGTGTCGAGATGAAGGCGTCGGCTCAGCCGC‑GCAGCCAGTTGGC‑GCAGCGGCGGGTTACCCAAGGCatga                                                                                                         <  1:773456/150‑1 (MQ=255)                                              cTTGCCGCTGCCCCAGTCCTTGAAATAGATCGAAGTGCCATCGCGGGTAACGAACGTGCTCATAGCGGTATCTCCTTGAAAGTGTCGAGATGAAGGCGTCGGCTCAGCCGC‑GCAGCCAGTTGGC‑GCAGCGGCGGGTTACCCAAGGCatga                                                                                                         <  2:2075680/150‑1 (MQ=255)                                              cTTGCCGCTGCCCCAGTCCTTGAAATAGATCGAAGTGCCATCGCGGGTAACGAACGTGCTCATAGCGGTATCTCCTTGAAAGTGTCGAGATGAAGGCGTCGGCTCAGCCGC‑GCAGCCAGTTGGC‑GCAGCGGCGGGTTACCCAAGGCatga                                                                                                         <  1:469348/150‑1 (MQ=255)                                                  ccGCTGCCCCAGTCCTTGAAATAGATCGAAGTGCCATCGCGGGTAACGAACGTGCTCATAGCGGTATCTCCTTGAAAGTGTCGAGATGAAGGCGTCGGCTCAGCCGC‑GCAGCCAGTTGGC‑GCAGCGGCGGGTTACCCAAGGCATGATGTa                                                                                                     <  1:393589/150‑1 (MQ=255)                                                   cGCTGCCCCAGTCCTTGAAATAGATCGAAGTGCCATCGCGGGTAACGAACGTGCTCATAGCGGTATCTCCTTGAAAGTGTCGAGATGAAGGCGTCGGCTCAGCCGC‑GCAGCCAGTTGGC‑GCAGCTGCTGGTTACCCAAGGCATGATGTAg                                                                                                    <  2:1699266/150‑1 (MQ=255)                                                     cTGCCCCAGTCCTTGAAATAGATCGAAGTGCCATCGCGGGTAACGAACGTGCTCATAGCGGTATCTCCTTGAAAGTGTCGAGATGAAGGCGTCGGCTCAGCCGC‑GCAGCCAGTTGGC‑GCAGCGGCGGGTTACCCAAGGCATGATGTAGaa                                                                                                  <  1:1979906/150‑1 (MQ=255)                                                         cccAGTCCTTGAAATAGATCGAAGTGCCATCGCGGGTAACGAACGTGCTCATAGCGGTATCTCCTTGAAAGTGTCGAGATGAAGGCGTCGGCTCAGCCGC‑GCAGCCAGTTGGC‑GCAGCGGCGGGTTACCCAAGGCATGATGTAGAAcacc                                                                                              >  2:2346141/1‑150 (MQ=255)                                                           cAGTCCTTGAAATAGATCGAAGTGCCATCGCGGGTAACGAACGTGCTCATAGCGGTATCTCCTTGAAAGTGTCGAGATGAAGGCGTCGGCTCAGCCGC‑GCAGCCAGTTGGC‑GCAGCGGCGGGTTACCCAAGGCATGATGTAGAAcaccac                                                                                            <  2:2348579/150‑1 (MQ=255)                                                             gTCCTTGAAATAGATCGAAGTGCCATCGCGGGTAACGAACGTGCTCATAGCGGTATCTCCTTGAAAGTGTCGAGATGAAGGCGTCGGCTCAGCCGC‑GCAGCCAGTTGGC‑GCAGCGGCGGGTTACCCAAGGCATGATGTAGAACACCACgg                                                                                          <  1:924069/150‑1 (MQ=255)                                                              tCCTTGAAATAGATCGAAGTGCCATCGCGGGTAACGAACGTGCTCATAGCGGTATCTCCTTGAAAGTGTCGAGATGAAGGCGTCGGCTCAGCCGC‑GCAGCCAGTTGGC‑GCAGCGGCGGGTTACCCAAGGCATGATGTAGAACACCACggg                                                                                         >  2:572418/1‑150 (MQ=255)                                                              tCCTTGAAATAGATCGAAGTGCCATCGCGGGTAACGAACGTGCTCATAGCGGTATCTCCTTGAAAGTGTCGAGATGAAGGCGTCGGCTCAGCCGC‑GCAGCCAGTTGGC‑GCAGCGGCGGGTTACCCAAGGCATGATGTAGAACACCACggg                                                                                         >  1:1743007/1‑150 (MQ=255)                                                               ccTTGAAATAGATCGAAGTGCCATCGCGGGTAACGAACGTGCTCATAGCGGTATCTCCTTGAAAGTGTCGAGATGAAGGCGTCGGCTCAGCCGC‑GCAGCCAGTTGGC‑GCAGCGGCGGGTTACCCAAGGCATGATGTAGAACACCACGGGc                                                                                        <  2:305344/150‑1 (MQ=255)                                                               ccTTGAAATAGATCGAAGTGCCATCGCGGGTAACGAACGTGCACATAGCGGTATCTCCTTGAAAGTGTCGAGATGAAGGCGTCGGCTCAGCCGC‑GCAGCCAGTTGGC‑GCAGCGGCGGGTTACCCAAGGCATGATGTAGAACACCACGGGc                                                                                        <  2:1286070/150‑1 (MQ=255)                                                                cTTGAAATAGATCGAAGTGCCATCGCGGGTAACGAACGTGCTCATAGCGGTATCTCCTTGAAAGTGTCGAGATGAAGGCGTCGGCTCAGCCGC‑GCAGCCAGTTGGC‑GCAGCGGCGGGTTACCCAAGGCATGATGTAGAACACCACGGGCa                                                                                       >  1:1755628/1‑150 (MQ=255)                                                                cTTGAAATAGATCGAAGTGCCATCGCGGGTAACGAACGTGCTCATAGCGGTATCTCCTTGAAAGTGTCGAGATGAAGGCGTCGGCTCAGCCGC‑GCAGCCAGTTGGC‑GCAGCGGCGGGTTACCCAAGGCATGATGTAGAACACCACGGGCa                                                                                       <  1:572418/150‑1 (MQ=255)                                                                 ttGAAATAGATCGAAGTGCCATCGCGGGTAACGAACGTGCTCATAGCGGTATCTCCTTGAAAGTGTCGAGATGAAGGCGTCGGCTCAGCCGC‑GCAGCCAGTTGGC‑GCATTGGTGGGGTACTCAACGCATGATGTAGAACACCACGGGCAg                                                                                      <  2:1481467/150‑1 (MQ=255)                                                                    aaaTAGATCGACGTCCTATCGCGCGTAACCACCGTGCTGTTAGCGGTATCTCCTTGAAATTGTCGAGATTAAGCCGTCGGCTCAGCCGC‑GCAGCCAGTTGGC‑GCAGCTGCGGGTTACCCAAGGCATGATGTAGAACACCACGGGCAGGAt                                                                                   <  2:735036/150‑1 (MQ=255)                                                                    aaaTAGATCGAAGTGCCATCGCGGGTAACGAACGTGCTCATAGCGGTATCTCCTTGAAAGTGTCGAGATGAAGGCGTCGGCTCAGCCGC‑GCAGCCAGTTGGC‑GCAGCGGCGGGTTACCCAAGGCATGATGTAGAACACCACGGGCAGGAt                                                                                   <  1:2346141/150‑1 (MQ=255)                                                                          aTCGAAGTGCCATCGCGGGTAACGAACGTGCTCATAGCGGTATCTCCTTGAAAGTGTCGAGATGAAGGCGTCGGCTCAGCCGC‑GCAGCCAGTTGGC‑GCAGCGGCGGGTTACCCAAGGCATGATGTAGAACACCACGGGCAGGATGACGaa                                                                             >  2:1276465/1‑150 (MQ=255)                                                                                gTGCCATCGCGGGTAACGAACGTGCTCATAGCGGTATCTCCTTGAAAGTGTCGAGATGAAGGCGTCGGCTCAGTCGC‑GCAGCCAGTTGGC‑GCAGCGGCGGGTTACCCAAGGCATGATGTa                                                                                                     <  1:92233/120‑1 (MQ=255)                                                                                gTGCCATCGCGGGTAACGAACGTGCTCATAGCGGTATCTCCTTGAAAGTGTCGAGATGAAGGCGTCGGCTCAGTCGC‑GCAGCCAGTTGGC‑GCAGCGGCGGGTTACCCAAGGCATGATGTa                                                                                                     >  2:92233/1‑120 (MQ=255)                                                                                   ccATCGCGGGTAACGAACGTGCTCATAGCGGTATCTCCTTGAAAGTGTCGAGATGAAGGCGTCGGCTCAGCCGC‑GCAGCCAGTTGGC‑GCAGCGGCGGGTTACCCAAGGCATGATGTAGAACACCACGGGCAGGATGACGAACAGGTTGAc                                                                    >  2:2312146/1‑150 (MQ=255)                                                                                    cATCGCGGGTAACGAACGTGCTCATAGCGGTATCTCCTTGAAAGTGTCGAGATGAAGGCGTCGGCTCAGCCGC‑GCAGCCAGTTGGC‑GCAGCGGCGGGTTACCCAAGGCATGATGTAGAACACCACGGGCAGGATGACGAAAAGGTTGACg                                                                   >  1:704521/1‑150 (MQ=255)                                                                                      tCGCGGGTAACGAACGTGCTCATAGCGGTATCTCCTTGAAAGTGTCGAGATGAAGGCGTCGGCTCAGCCGC‑GCAGCCAGTTGGC‑GCAGCGGCGGGTTACCCGAGGCATGATGTAGaa                                                                                                  >  2:1613217/1‑117 (MQ=255)                                                                                      tCGCGGGTAACGAACGTGCTCATAGCGGTATCTCCTTGAAAGTGTCGAGATGAAGGCGTCGGCTCAGCCGC‑GCAGCCAGTTGGC‑GCAGCGGCGGGTTACCCAAGGCATGATGTAGaa                                                                                                  <  1:1613217/117‑1 (MQ=255)                                                                                      tCGCGGGTAACGAACGTGCTCATAGCGGTATCTCCTTGAAAGTGTCGAGATGAAGGCGTCGGCTCAGCCGC‑GCAGCCAGTTGGC‑GCAGCGGCGGGTTACCCAAGGCATGATGTAGAAGACCACGGGCAGGATGACGAACAgg                                                                         >  2:1229735/1‑142 (MQ=255)                                                                                      tCGCGGGTAACGAACGTGCTCATAGCGGTATCTCCTTGAAAGTGTCGAGATGAAGGCGTCGGCTCAGCCGC‑GCAGCCAGTTGGC‑GCAGCGGCGGGTTACCCAAGGCATGATGTAGAACACCACGGGCAGGATGACGAACAgg                                                                         <  1:1229735/142‑1 (MQ=255)                                                                                      tCGCGGGTAACGAACGTGCTCATAGCGGTATCTCCTTGAAAGTGTCGAGATGAAGGCGTCGGCTCAGCCGC‑GCAGCCAGTTGGC‑GCAGCGGCGGGTTACCCAAGGCATGATGTAGAACACCACGGGCAGGATGACGAACAGGTTGACGAt                                                                 >  1:1898511/1‑150 (MQ=255)                                                                                      tCGCGGGTAACGAACGTGCTCATAGCGGTATCTCCTTGAAAGTGTCGAGATGAAGGCGTCGGCTCAGCCGC‑GCAGCCAGTTGGC‑GCAGCGGCGGGTTACCCAAGGCATGATGTAGAACACCACGGGCAGGATGACGAACAGGTTGACGAt                                                                 >  2:2256948/1‑150 (MQ=255)                                                                                      gcaacctgatcgtcaacctgttcgtcatcctgcccgtggtgttctacatcatgccttgggtaacCAGCCGC‑GCAGCCAGTTGGC‑GCAGCGGCGGGTTAc                                                                                                                    >  1:557239‑M1/65‑99 (MQ=255)                                                                                      gcaacctgatcgtcaacctgttcgtcatcctgcccgtggtgttctacatcatgccttgggtaacCAGCCGC‑GCAGCCAGTTGGC‑GCAGCGGCGGGTTAc                                                                                                                    <  2:557239‑M1/35‑1 (MQ=255)                                                                                       cgcgGGTAACGAACGTGCTCATAGCGGTATCTCCTTGAAAGTGTCGAGATGAAGGCGTGGGCTCAGCCGC‑GCAGCCAGTTGGC‑GCAGCGGCGGGTTACCCAAGGCATGATGTAGAACACCACGGGCAGGATGACGAACAGGTTGACGCTc                                                                <  2:324103/150‑1 (MQ=255)                                                                                                 gaacgTGCTCATAGCGGTATCTCCTTGNAAGTGTCGAGATNAAGGCGNCGGCTCAGCCGC‑GCAGCCAGTTGGC‑GCAGCGGCGGGTTACCCAAGGCATGATGTAGAACACCACGGGCAGGATGACGAACAGGTTGACGATCAGGTTGCCgg                                                      >  1:2409636/1‑150 (MQ=255)                                                                                                 gaacgTGCTCATAGCGGTATCTCCTTGAAAGTGTCGAGATGAAGGCGTCGGCTCAGCCGC‑GCAGCCAGTTGGC‑GCAGCGGCGGGTTACCCAAGGCATGATGTAGAACACCACGGGCAGGATGACGAACAGGTTGACGATCAGGTTGCCgg                                                      >  2:671118/1‑150 (MQ=255)                                                                                                 gaacgTGCACATAGCGGTATCTCCTTGAAAGTGTCGAGATGAAGGCGTCGGCTCAGCCGC‑GCAGCCAGTTGGC‑GCAGCGGCGGGTTACCCAAGGCATGATGTAGAACACCACGGGCAGGATGACGAACAGGTTGACGATCAGGTTGCCgg                                                      >  2:1371152/1‑150 (MQ=255)                                                                                                       gCTCATAGCGGTATCTCCTTGAAAGTGTCGAGATGAAGGCGTCGGCTCAGCCGC‑GCAGCCAGTTGGC‑GCAGCGTCGGGTTACCCAAGGCATGATGTAGAACACCACGGGCAGGATGACGAAc                                                                            <  1:1268178/122‑1 (MQ=255)                                                                                                       gCTCATAGCGGTATCTCCTTGAAAGTGTCGAGATGAAGGCGTCGGCTCAGCCGC‑GCAGCCAGTTGGC‑GCAGCGGCGGGTTACCCAAGGCATGATGTAGAACACCACGGGCAGGATGACGAAc                                                                            >  2:1268178/1‑122 (MQ=255)                                                                                                       gCTCATAGCGGTATCTCCTTGAAAGTGTCGAGATGAAGGCGTCGGCTCAGCCGC‑GCAGCCAGTTGGC‑GCAGCGGCGGGTTACCCAAGGCATGATGTAGAACACCACGGGCAGGATGACGAACAGGTTGACGATCAGGTTGCCGGTAATCa                                                <  2:704521/150‑1 (MQ=255)                                                                                                           aTAGCGGTATCTCCTTGAAAGTGTCGAGATGAAGGCGTCGGCTCAGCCGC‑GCAGCCAGTTGGC‑GCAGCGGCGGGTTACCCAAGGCATGATGTAGAACACCACGGGCAGGATGACGAACAgg                                                                         <  2:2185250/121‑1 (MQ=255)                                                                                                           aTAGCGGTATCTCCTTGAAAGTGTCGAGATGAAGGCGTCGGCTCAGCCGC‑GCAGCCAGTTGGC‑GCAGCGGCGGGTTACCCAAGGCATGATGTAGAACACCACGGGCAGGATGACGAACAgg                                                                         >  1:2185250/1‑121 (MQ=255)                                                                                                           aTAGCGGTATCTCCTTGAAAGTGTCGAGATGAAGGCGTCGGCTCAGCCGC‑GCAGCCAGTTGGC‑GCAGCGGCGGGTTACCCAAGGCATGATGTAGAACACCACGGGCAGGATGACGAACAGGTTGACGATCAg                                                              <  1:1927834/132‑1 (MQ=255)                                                                                                           aTAGCGGTATCTCCTTGAAAGTGTCGAGATGAAGGCGTCGGCTCAGCCGC‑GCAGCCAGTTGGC‑GCAGCGGCGGGTTACCCAAGGCATGATGTAGAACACCACGGGCAGGATGACGAACAGGTTGACGATCAg                                                              >  2:1927834/1‑132 (MQ=255)                                                                                                           aTAGCGGTATCTCCTTGAAAGTGTCGAGATGAAGGCGTCGGCTCAGCCGC‑GCAGCCAGTTGGC‑GCAGCGGCGGGTTACCCAAGGCATGATGTAGAACACCACGGGCAGGATGACGAACAGGTTGACGATCAGGTTGCCGGTAATCAcgcc                                            <  1:2077769/150‑1 (MQ=255)                                                                                                           aTAGCGGTATCTCCTTGAAAGTGTCGAGATGAAGGCGTCGGCTCAGCCGC‑GCAGCCAGTTGGC‑GCAGCGGCGGGTTACCCAAGGCATGATGTAGAACACCACGGGCAGGATGACGAACAGGTTGACGATCAGGTTGCCGGTAATCAcgcc                                            >  1:1492483/1‑150 (MQ=255)                                                                                                              gCGGTATCTCCTTGAAAGTGTCGAGATGAAGGCGTCGGCTCAGCCGC‑GCAGCCAGTTGGC‑GCAGCGGCGGGTTACCCAAGGCATGATGTAGGAAACGACGGGCAGGATGACGAACAGGTTTACGATCAGGTTGCCGGTAATCACgccgcc                                         >  1:1000530/1‑150 (MQ=255)                                                                                                              gCGGTATCTCCTTGAAAGTGTCGAGATGAAGGCGTCGGCTCAGCCGC‑GCAGCCAGTTGGC‑GCAGCGGCGGGTTACCCAAGGCATGATGTAGAACACCACGGGCAGGATGACGAACAGGTTGACGATCAGGTTGCCGGTAATCACgccgcc                                         >  1:2043204/1‑150 (MQ=255)                                                                                                                 gTATCTCCTTGAAAGTGTCGAGATGAAGGCGTCGGCTCAGCCGC‑GCAGCCAGTTGGC‑GCAGCGGCGGGTTACCCAAGGCATGATGTAGAACACCACGGGCAGGATGACGAACAGGtt                                                                       <  1:1794253/117‑1 (MQ=255)                                                                                                                 gTATCTCCTTGAAAGTGTCGAGATGAAGGCGTCGGCTCAGCCGC‑GCAGCCAGTTGGC‑GCAGCGGCGGGTTACCCAAGGCATGATGTAGAACACCACGGGCAGGATGACGAACAGGtt                                                                       >  2:1794253/1‑117 (MQ=255)                                                                                                                    tctcCTTGAAAGTGTCGAGATGAAGGCGTCGGCTCAGCCGC‑GCAGCCAGTTGGC‑GCAGCGGCGGGTTACCCAAGGCATGATGTAGAACACCACGGGCAGGATGACGAACAGGTTGACGATCAGGTTGCCGGTAATCACGCCGCCCAGCt                                    >  2:615080/1‑149 (MQ=255)                                                                                                                    tctcCTTGAAAGTGTCGAGATGAAGGCGTCGGCTCAGCCGC‑GCAGCCAGTTGGC‑GCAGCGGCGGGTTACCCAAGGCATGATGTAGAACACCACGGGCAGGATGACGAACAGGTTGACGATCAGGTTGCCGGTAATCACGCCGCCCAGCt                                    <  1:615080/149‑1 (MQ=255)                                                                                                                      tcCTTGAAAGTGTCGAGATGAAGGCGTCGGCTCAGCCGC‑GCAGCCAGTTGGC‑GCAGCGGCGGGTTACCCAAGGCATGATGTAGAACACCACGGGCAGGATGACGAACAGGTTGACGATCAGGTTGCCGGTAATCACGCCGCCCAGCTGCg                                 >  1:461725/1‑150 (MQ=255)                                                                                                                      tcCTTGAAAGTGTCGAGATGAAGGCGTCGACTCAGCCGC‑GCAGCCAGTTGGC‑GCAGCGGCGGGTTACCCAAGGCATGATGTAGAACACCACGGGCAGGATGACGAACAGGTTGACGATCAGGTTGCCGGTATTCACGCCGCCCGGCTGCg                                 >  1:598996/1‑150 (MQ=255)                                                                                                                        cTTGAAAGTGTCGAGATGAAGGCGTCGGCTCAGCCGC‑GCAGCCAGTTGGC‑GCAGCGGCGGGTTACCCAAGGCATGATGTAGAACACCACGGGCAGGATGACGAACAGGTTGACGATCAGGTTGCCGGTAATCACGCCGCCCAGCTGCggg                               >  1:251387/1‑150 (MQ=255)                                                                                                                        cTTGAAAGTGTCGAGATGAAGGCGTCGGCTCAGCCGC‑GCAGCCAGTTGGC‑GCAGCGGCGGGTTACCCAAGGCATGATGTAGAACACCACGGGCAGGATGACGAACAGGTTGACGATCAGGTTGCCGGTAATCACGCCGCCCAGCTGCggg                               >  2:783208/1‑150 (MQ=255)                                                                                                                          tGAAAGTGTCGAGATGAAGGCGTCGGCTCAGCCGC‑GCAGCCAGTTGGC‑GCAGCGGCGGGTTACCCAAGGCATGATGTAGAACACCACGGGCAGGATGACGAACAGGTTGACGATCAGGTTGCCGGTAATCACGCCGCCCAGCTGCGGGaa                             <  2:1425848/150‑1 (MQ=255)                                                                                                                          tGAAAGTGTCGAGATGAAGGCGTCGGCTCAGCCGC‑GCAGCCAGTTGGC‑GCAGCGGCGGGTTACCCAAGGCATGATGTAGAACACCACGGGCAGGATGACGAACAGGTTGACGATCAGGTTGCCGGTAATCACGCCGCCCAGCTGCGGGaa                             <  2:2043204/150‑1 (MQ=255)                                                                                                                          tGAAAGTGTCGAGATGAAGGCGTCGGCTCAGCCGC‑GCAGCCAGTTGGC‑GCAGCGGCGGGTTACCCAAGGCATGATGTAGAACACCACGGGCAGGATGACGAACAGGTTGACGATCAGGTTGCCGGTAATCACGCCGCCCAGCTGCGGGaa                             <  1:793238/150‑1 (MQ=255)                                                                                                                               gtgtCGAGATGAAGGCGTCGGCTCAGCCGC‑GCAGCCAGTTGGC‑GCAGCGGCGGGTTACCCAAGGCATGATGTAGAACACCACGGGCAGGATGACGAACAGGTTGACGATCAGGTTGCCGGTAATCACGCCGCCCAGCTGCGGGAAgcgcg                        >  1:811137/1‑150 (MQ=255)                                                                                                                                  tCGAGATGAAGGCGTCGGCTCAGCCGC‑GCAGCCAGTTGGC‑GCAGCGGCGGGTTACCCAAGGCATGATGTAGAACACCACGGGCAGGATGACGAACAGGTTGACGATCAGGTTGCCGGTAATCACGCCGCCCAGCTGCGGGAAGCGCGCaa                     >  2:1805649/1‑150 (MQ=255)                                                                                                                                  tCGAGATGAAGGCGTCGGCTCAGCCGC‑GCAGCCAGTTGGC‑GCAGCGGCGGGTTACCCAAGGCATGATGTAGAACACCACGGGCAGGATGACGAACAGGTTGACGATCAGGTTGCCGGTAATCACGCCGCCCAGCTGCGGGAAGCGCGCaa                     >  2:1604002/1‑150 (MQ=255)                                                                                                                                    gagaTGAAGGCGTCGGCTCAGCCGC‑GCAGCCAGTTGGC‑GCAGCGGCGGGTTACCCAAGGCATGATGTAGAACACCACGGGCAGGATGACGAACAGGTTGACGATCAGGTTGCCGGTAATCACGCCGCCCAGCTGCGGGAAGCGCGCAAAc                   >  2:1519920/1‑150 (MQ=255)                                                                                                                                    gagaTGAAGGCGTCGGCTCAGCCGC‑GCAGCCAGTTGGC‑GCAGCGGCGGGTTACCCAAGGCATGATGTAGAACACCACGGGCAGGATGACGAACAGGTTGACGATCAGGTTGCCGGTAATCACGCCGCCCAGCTGCGGGAAGCGCGCAAAc                   >  1:510246/1‑150 (MQ=255)                                                                                                                                    catcatgccttgggtaacCCGCCGCTGC‑GCCAACTGGCTGC‑GCGGCTGGTTACCCAAGGCATGATGTAGAACACCACGGGCAGGATGACGAACAGGTTGACGATCAGGTTGCCGGTAATCACGCCGCCCAGCTGCGGGAAgc                           >  1:937872‑M1/19‑142 (MQ=255)                                                                                                                                    catcatgccttgggtaacCCGCCGCTGC‑GCCAACTGGC‑TGCGCGGCTGGTTACCCAAGGCATGATGTAGAACACCACGGGCAGGATGACGAACAGGTTGACGATCAGGTTGCCGGTAATCACGCCGCCCAGCTGCGGGAAgc                           <  2:937872‑M1/124‑1 (MQ=255)                                                                                                                                     agaTGAAGGCGTCGGCTCAGCCGC‑GCAGCCAGTTGGC‑GCAGCGGCGGGGTACCCAAGGCATGATGTAGAACACCACGGGCAGGATGACGAACAGGTTGACGATCAGGTTGCCGGTAATCACGCCGCCCAGCTGCGGGAAGCGCGCAAACa                  >  2:1002153/1‑150 (MQ=255)                                                                                                                                       aTGAAGGCGTCGGCTCAGCCGC‑GCAGCCAGTTGGC‑GCAGCGGCGGGTTACCCAAGGCATGATGTAGAACACCACGGGCAGGATGACGAACAGGTTGACGATCAGGTTGCCGGTAATCACGCCGCCCAGCTGCGGGAAGCGCGCAAACAgc                >  2:2240617/1‑150 (MQ=255)                                                                                                                                         gAAGGCGTCGGCTCAGCCGC‑GCAGCCAGTTGGC‑GCAGCGGCGGGTTACCCAAGGCATGATGTAGAACACCACGGGCAGGATGACGAACAGGTTGACGATCAGGTTGCCGGTAATCACGCCGCCCAGCTGCGGGAAGCGCGCAAACAgcgg              >  1:2191436/1‑150 (MQ=255)                                                                                                                                          aaGGCGTCGGCTCAGCCGC‑GCAGCCAGTTGGC‑GCAGCGGCGGGTTACCCAAGGCATGATGTAGAACACCACGGGCAGGATGACGAACAGGTTGACGATCAGGTTGCCGGTAATCACGCCGCCCAGCTGCGGGAAGCGCGCAAACAgcggc             <  1:1800018/150‑1 (MQ=255)                                                                                                                                            ggCGTCGGCTCAGCCGC‑GCAGCCAGTTGGC‑GCAGCGGCGGGTTACCCAAGGCATGATGTAGAACACCACGGGCAGGATGACGAACAGGTTGACGATCAGGTTGCCGGTAATCACGCCGCCCAGCTGCGGGAAGCGCGCAAACAGCGgcgc           <  2:1492483/150‑1 (MQ=255)                                                                                                                                             gCGTCGGCTCAGCCGC‑GCAGCCAGTTGGC‑GCAGGGGGGGGTTACCCAAGGTATGATGTAGAACACCACGGGCAGGATGACGAACAGGTTGACGATCAGGTTGCCGGTAATCACGCCGCCCAGCTGCGGGAAGCGCGCAAACAGCGGCGcc          >  2:533659/1‑150 (MQ=255)                                                                                                                                             gCGTCGGCTCAGCCGC‑GCAGCCAGTTGGC‑GCAGCGGCGGGTTACCCAAGGCATGATGTAGAACACCACGGGCAGGATGACGAACAGGTTGACGATCAGGTTGCCGGTAATCACGCCGCCCAGCTGCGGGAAGCGCGCAAACAGCGGCGcc          >  2:1501365/1‑150 (MQ=255)                                                                                                                                                 cGGCTCAGCCGC‑GCAGCCAGTTGGC‑GCAGCGGCGGGTTACCCAAGGCATGATGTAGAACACCACGGGCAGGATGACGAACAGGTTGACGATCAGGTTGCCGGTAATCACGCCGCCCAGCTGCGGGAAGCGCGCAAACAGCGGCGCcagca      >  1:2198711/1‑150 (MQ=255)                                                                                                                                                     tCAGCCGC‑GCAGCCAGTTGGC‑GCAGCGGCGGGTTACCCAAGGCATGATGTAGAACACCACGGGCAGGATGACGAACAGGTTGACGATCAGGTTGCCGGTAATCACGCCGCCCAGCTGCGGGAAGCGCGCAAACAGCGGCGCCAGCAGTTg  >  2:383491/1‑150 (MQ=255)                                                                                                                                                     tCAGCCGC‑GCAGCCAGTTGGC‑GCAGCGGCGGGTTACCCAAGGCATGATGTAGAACACCACGGGCAGGATGACGAACAGGTTGACGATCAGGTTGCCGGTAATCACGCCGCCCAGCTGCGGGAAGCGCGCAAACAGCGGCGCCAGCAGTTg  >  1:1179903/1‑150 (MQ=255)                                                                                                                                                      |                                                                                                                                                       CCACATGTCGGCATCCAGCGGCCAGCCGTGGCTGAACAGCACGGGCTTGCCGCTGCCCCAGTCCTTGAAATAGATCGAAGTGCCATCGCGGGTAACGAACGTGCTCATAGCGGTATCTCCTTGAAAGTGTCGAGATGAAGGCGTCGGCTCAGCCGC‑GCAGCCAGTTGGC‑GCAGCGGCGGGTTACCCAAGGCATGATGTAGAACACCACGGGCAGGATGACGAACAGGTTGACGATCAGGTTGCCGGTAATCACGCCGCCCAGCTGCGGGAAGCGCGCAAACAGCGGCGCCAGCAGTTG  >  NC_002947/5997998‑5998295

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.