New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 6086442 =77 (0.870)14 (0.170) 10/228 NT 16.1% intergenic (+59/‑93) aspA/oruR aspartate ammonia‑lyase/ornithine utilization transcriptional regulator
?NC_002947 6086469 = 75 (0.910)intergenic (+86/‑66) aspA/oruR aspartate ammonia‑lyase/ornithine utilization transcriptional regulator

Only 100 of 107 total aligned reads displayed.

GAAGAGAAGCTGCTGGACGACGCGATGCTCGACGACATCCTGCGTCCGGAAAACATGATCGCTC‑CACGTCTGGTTCCGCTGAAGGCGTAATCAGGCCGCTGTAAACAGTCTCACCAGGTCGAGGGACTAGACACCTCTCAACCTTTCCAAGGCCCGAGCGCTTGC‑T‑TCGGGCCTTTTTTTTGCCTGAAGGTTTTGGAGGCCGCTATGCAGCCTTCGCAACACCCGGCCGCGCCGGCAGGGTATGTGGTTTGCCTGCAGCCCCGGATATCGGCACATAACTTGCTCCGTAATGCGTCCC  >  NC_002947/6086294‑6086591
                                                                                                                                                     |                                                                                                                                                       
gAAGAGAAGCTGCTGGACGACGCGATGCTCGACGACCTCATGACTGCGGCAAACTTGATCGCTC‑CACGTCTGGGGCCGCTGAAGGCGTAATCAGGCCGCTGTAAACAGTCTCACCAGGTCGAGGGACTAGACACCTCTCAACCTTTCCaa                                                                                                                                                        >  1:657655/1‑150 (MQ=255)
gAAGAGAAGCTGCTGGACGACGCGATGCTCGACGACATCCTGCGTCCGGAAAACATGATCGCTC‑CACGTCTGGTTCCGCTGAAGGCGTAATCAGGCCGCTGTAAACAGTCTCACCAGGTCGAGGGACTAGACACCTCTCAACCTTTCCaa                                                                                                                                                        >  1:205237/1‑150 (MQ=255)
gAAGAGAAGCTGCTGGACGACGCGATGCTCGACGACATCCTGCGTCCGGAAAACATGATCGCTC‑CACGTCTGGTTCCGCTGAAGGCGTAATCAGGCCGCTGTAAACAGTCTCACCAGGTCGAGGGACTAGACACCTCTCAACCTTTCCaa                                                                                                                                                        >  2:1954464/1‑150 (MQ=255)
 gcatgctgggtaatcccgtttggctgggacgcattacggagcaagttatgtgccgatatccggggctgcaggcaaaccacataccctgccggcgcggccgggtgttgcgaaggctgcatagcggcctccaaaaccttcaggcaaaaaaaa                                                                                                                                                        >  2:2220786‑M1/149‑150 (MQ=255)
  agagAAGCTGCTGGACGACGCGATGCTCGACGACATCCTGCGTCCGGAAAACATGATCGCTC‑CACGTCTGGTTCCGCTGAAGGCGTAATCAGGCCGCTGTAAACAGTCTCACCAGGTCGAGGGACTAGACACCTCTCAACCTTTCCAAgg                                                                                                                                                      <  2:693530/150‑1 (MQ=255)
        gggtaatcccgtttggctgggacgcattacggagcaagttatgtgccgatatccggggctgcaggcaaaccacataccctgccggcgcggccgggtgttgcgaaggctgcatagcggcctccaaaaccttcaggcaaaaaaAAGGCCCGa                                                                                                                                                 >  1:563120‑M1/142‑150 (MQ=255)
            ctgGACGACGCGATGCTCGACGACATCCTGCGTCCGGAAAACATGCTAGCTC‑CACGTCTGGTTCCGCTGAAGGCGTAATCAGGCCGCTGTAAACAGTCTCACCAGGTCGAGGGACTAGACACCTCTCAACCTTTCCAAGGCCCGAGCgct                                                                                                                                            <  1:1954464/150‑1 (MQ=255)
                  gacgCGATGCTCGACGACATCCTGCGTCCGGAAAACATGATCGCTC‑CACGTCTGGTTCCGCTGAAGGCGTAATCAGGCCGCTGTAAACAGTCTCACCAGGTCGAGGGACTAGACACCTCTCAACCTTTCCAAGGCCCGAGCGCTTGC‑T‑Tc                                                                                                                                    <  2:1502870/150‑1 (MQ=255)
                   acgCGATGCTCGACGACATCCTGCGTCCGGAAAACATGATCGCTCACAC‑TACGCTTTCGCTGAAGGCGTAATCAGGCCGCTGTAAACAGTCTCACCAGGTCGAGGGACTAGACACCTCTCAACCTTTCCAAGGCCCGAGCGCTTGC‑T‑TCg                                                                                                                                   <  2:1872501/150‑1 (MQ=255)
                   acgCGATGCTCGACGACATCCTGCGTCCGGAAAACATGATCGCTC‑CACGTCTGGTTCCGCTGAAGGCGTAATCAGGCCGCTGTAAACAGTCTCACCAGGTCGAGGGACTAGACACCTCTCAACCTTTCCAAGGCCCGAGCGCTTGC‑T‑TCg                                                                                                                                   <  2:657655/150‑1 (MQ=255)
                       gATGCTCGACGACATCCTGCGTCCGGAAAACATGATCGCTC‑CACGTCTGGTTCCGCTGAAGGCGTAATCAGGCCGCTGTAAACAGTCTCACCAGGTCGAGGGACTAGCCACATATCGACCTGTCCAAGGCCCGAGCGCTTGC‑T‑TCGGGcc                                                                                                                               >  2:802497/1‑150 (MQ=255)
                       gATGCTCGACGACATCCTGCGTCCGGAAAACATGATCGCTC‑CACGTCTGGTTCCGCTGAAGGCGTAATCAGGCCGCTGTAAACAGTCTCACCAGGTCGAGGGACTAGAAACCTCTCAACCTTTCCAAGGCCCGAGCGCTTGC‑T‑TCGGGcc                                                                                                                               >  2:828455/1‑150 (MQ=255)
                            tCGACGACATCCTGCGTCCGGAAAACATGATCGCTC‑CACGTCTGGTTCCGCTGAAGGCGTAATCAGGCCGCTGTAAACAGTCTCACCAGGTCGAGGGACTAGACACCTCTCAACCTTTCCAAGGCCCGAGCGCTTGC‑T‑TCGGGCCttttt                                                                                                                          >  1:1936083/1‑150 (MQ=255)
                             acgcattacggagcaagttatgtgccgatatccggggctgcaggcaaaccacataccctgccggcgcggccgggtgttgcgaaggctgcatagcggcctccaaaaccttcaggcaaaaaaAAGGCCCGAGCGCTTGC‑T‑TCGGGc                                                                                                                                >  2:2208030‑M1/121‑144 (MQ=255)
                             acgcattacggagcaagttatgtgccgatatccggggctgcaggcaaaccacataccctgccggcgcggccgggtgttgcgaaggctgcatagcggcctccaaaaccttcaggcaaaaaaAAGGCCCGAGCGCTTGC‑T‑TCGGGc                                                                                                                                <  1:2208030‑M1/24‑1 (MQ=255)
                                 gacATCCTGCGTCCGGAAAACATGATCGCTC‑CACGTCTGGTTCCGCTGAAGGCGTAATCAGGCCGCTGTAAACAGTCTCACCAGGTCGAGGGACTAGACACCTCTCAACCTTTCCAAGGCCCGAGCGCTTGC‑T‑TCGGGCCTTTTTTTTGc                                                                                                                     >  2:1282637/1‑150 (MQ=255)
                                 gacATCCTGCGTCCGGAAAACATGATCGCTC‑CACGTCTGGTTCCGCTGAAGGCGTAATCAGGCCGCTGTAAACAGTCTCACCAGGTCGAGGGACTAGACACCTCTCAACCTTTCCAAGGCCCGAGCGCTTGC‑T‑TCGGGCCTTTTTTTTGc                                                                                                                     <  1:1282637/150‑1 (MQ=255)
                                        agcaagttatgtgccgatatccggggctgcaggcaaaccacataccctgccggcgcggccgggtgttgcgaaggctgcatagcggcctccaaaaccttcaggcaaaaaaAAGGCCCGAGCGCTTGC‑T‑TCGGGCCTTTTTTTTg                                                                                                                      <  2:1512889‑M1/34‑1 (MQ=255)
                                        agcaagttatgtgccgatatccggggctgcaggcaaaccacataccctgccggcgcggccgggtgttgcgaaggctgcatagcggcctccaaaaccttcaggcaaaaaaAAGGCCCGAGCGCTTGC‑T‑TCGGGCCTTTTTTTTg                                                                                                                      >  1:1512889‑M1/110‑143 (MQ=255)
                                           gTCCGGAAAACATGATCGCTC‑CACGTCTGGTTCCGCTGAAGGCGTAATCAGGCCGCTGTAAACAGTCTCACCAGGTCGAGGGACTAGACACCTCTCAACCTTTCCAAGGCCCGAGCGCTTGC‑T‑TCGGGCCTTTTTTTTGCCTGAAGGttt                                                                                                           >  1:794732/1‑150 (MQ=255)
                                            tCCGGAAAACATGATCGCTC‑CACGTCTGGTTCCGCTGAAGGCGTAATCAGGCCGCTGTAAACAGTCTCACCAGGTCGAGGGACTAGACACCTCTCAACCTTTCCAAGGCCCGAGCGCTTGC‑T‑TCGGGCCTTTTTTTTGCCTGAAGGtttt                                                                                                          <  2:205237/150‑1 (MQ=255)
                                            agttatgtgccgatatccggggctgcaggcaaaccacataccctgccggcgcggccgggtgttgcgaaggctgcatagcggcctccaaaaccttcaggcaaaaaaAAg                                                                                                                                                       <  2:1141049‑M1/3‑1 (MQ=255)
                                            agttatgtgccgatatccggggctgcaggcaaaccacataccctgccggcgcggccgggtgttgcgaaggctgcatagcggcctccaaaaccttcaggcaaaaaaAAg                                                                                                                                                       >  1:1141049‑M1/106‑108 (MQ=255)
                                             ccGGAAAACATGATCGCTC‑CACGTCTGGTTCCGCTGAAGGCGTAATCAGGCCGCTGTAAACAGTCTCACCAGGTCGAGGGACTAGACACCTCTCAACCTTTCCAAGGCCCGAGCGCTTGC‑T‑TCGGGTCTTTTTTTTGCCTGAAGGTTTTg                                                                                                         <  1:53183/150‑1 (MQ=255)
                                              cGGAAAACATGATCGCTC‑CACGTCTGGTTCCGCTGAAGGCGTAATCAGGCCGCTGTAAACAGTCTCACCAGGTCGAGGGACTAGACACCTCTCAACCTTTCCAAGGCCCGAGCGCTTGC‑T‑TCGGGCCTTTTTTTTGc                                                                                                                     >  2:199687/1‑137 (MQ=255)
                                              cGGAAAACATGATCGCTC‑CACGTCTGGTTCCGCTGAAGGCGTAATCAGGCCGCTGTAAACAGCCTCACCAGGTCGAGGGACTAGACACCTCTCAACCTTTCCAAGGCCCGAGCGCTTGC‑T‑TCGGGCCTTTTTTTTGc                                                                                                                     <  1:199687/137‑1 (MQ=255)
                                               ggAAAACATGATCGCTC‑CACGTCTGGTTCCGCTGAAGGCGTAATCAGGCCGCTGTAAACAGTCTCACCAGGTCGAGGGACTAGACACCTCTCAACCTTTCCAAGGCCCGAGCGCTTGC‑T‑TCGGGCCTTTTTTTTGCCTGaa                                                                                                                >  1:766554/1‑141 (MQ=255)
                                               ggAAAACATGATCGCTC‑CACGTCTGGTTCCGCTGAAGGCGTAATCAGGCCGCTGTAAACAGTCTCACCAGGTCGAGGGACTAGACACCTCTCAACCTTTCCAAGGCCCGAGCGCTTGC‑T‑TCGGGCCTTTTTTTTGCCTGaa                                                                                                                <  2:766554/141‑1 (MQ=255)
                                               ggAAAACATGATCGCTC‑CACGTCTGGTTCCGCTGAAGGCGTAATCAGGCCGCTGTAAACAGTCTCACCAGGTCGAGGGACTAGACACCTCTCAACCTTTCCAAGGCCCGAGCGCTTGC‑T‑TCGGGCCTTTTTTTTGCCTGAAGGTTTTGGa                                                                                                       <  1:2144557/150‑1 (MQ=255)
                                               ggAAAACATGATCGCTC‑CACGTCTGGTTCCGCTGAAGGCGTAATCAGGCCGCTGTAAACAGTCTCACCAGGTCGAGGGACTAGACACCTCTCAACCTTTCCAAGGCCCGAGCGCTTGC‑T‑TCGGGCCTTTTTTTTGCCTGAAGGTTTTGGa                                                                                                       <  1:72954/150‑1 (MQ=255)
                                                gAAAACATGATCGCTC‑CACGTCTGGTTCCGCTGAAGGCGTAATCAGGCCGCTGTAAACAGTCTCACCAGGTCGAGGGACTAGACACCTCTCAACCTTTCCAAGGCCCGAGCGCTTGC‑T‑TCGGGCCTTTTTTTTGCCTGAAGGTTTTGGAg                                                                                                      <  2:1936083/150‑1 (MQ=255)
                                                atctgctgatatccggtgttgcaggtaaaccacataccctgctggcgcggccgcgtgttgctaacgctgcatagcggcctccaaaaccttcatgcaaaaaaAATGCCCGTTCGCTTGC‑T‑TCGGGCCTTTTTTTTGCCTGAAGGTTTtggg                                                                                                       >  2:1063242‑M1/102‑149 (MQ=255)
                                                   aaCATGATCGCTC‑CACGTCTGGTTCCGCTGAAGGCGTAATCAGGCCGCTGTAAACAGTCTCACCAGGTCGAGGGACTAGACACCTCTCAACCTTTCCAAGGCCCGAGCGCTTGC‑T‑TCGGGCC‑TTTTTTTGCCTGAAg                                                                                                               >  1:1545847/1‑137 (MQ=255)
                                                        gATCGCTC‑CACGTCTGGTTCCGCTGAAGGCGTAATCAGGCCGCTGTAAACAGTCTCACCAGGTCGAGGGACTAGACACCTCTCAACCTTTCCAAGGCCCGAGCGCTTGC‑T‑TCGGGCCTTTTTTTTGCCTGAAGGTTTTGGAGGCCGCTAt                                                                                              >  1:1968074/1‑150 (MQ=255)
                                                          tCGCTC‑CACGTCTGGTTCCGCTGAAGGCGTAATCAGGCCGCTGTAAACAGTCTCACCAGGTCGAGGGACTAGACACCTCTCAACCTTTCCAAGGCCCGAGCGCTTGC‑T‑TCGGGCCTTTTTTTTGCCTGAAGGTTTTGGAGGCCGCTATGc                                                                                            >  1:614845/1‑150 (MQ=255)
                                                            gCTC‑CACGTCTGGTTCCGCTGAAGGCGTAATCAGGCCGCTGTAAACAGTCTCACCAGGTCGAGGGACTAGACACCTCTCAACCTTTCCAAGGCCCGAGCGCTTGC‑T‑TCGGGCCTTTTTTTTGCCTGAAGGTTTTGGAGGCCGCTATGCAg                                                                                          >  2:1167002/1‑150 (MQ=255)
                                                                 cACGTCTGGTTCCGCTGAAGGCGTAATCAGGCCGCTGTAAACAGTCTCACCAGGTCGAGGGACTAGACACCTCTCAACCTTTCCAAGGCCCGAGCGCTTGC‑T‑TCGGGCCTTTTTTTTGCCTGAAGGTTTTGGAGGCCGCTATGCAGCCtt                                                                                      >  1:1313148/1‑150 (MQ=255)
                                                                       ggcaaaccacataccctgccggcgcggccgggtgttgcgaaggctgcatagcggcctccaaaaccttcaggcaaaaaaAAGGCCCGAGCGCTTGC‑T‑TCGGGc                                                                                                                                <  2:1858175‑M1/24‑1 (MQ=255)
                                                                       ggcaaaccacataccctgccggcgcggccgggtgttgcgaaggctgcatagcggcctccaaaaccttcaggcaaaaaaAAGGCCCGAGCGCTTGC‑T‑TCGGGc                                                                                                                                >  1:1858175‑M1/79‑102 (MQ=255)
                                                                       ggcaaaccacataccctgccggcgcggccgggtgttgcgaaggctgcatagcggcctccaaaaccttcaggcaaaaaaAAGGCCCGAGCGCTTGC‑T‑TCGGGc                                                                                                                                >  1:1858214‑M1/79‑102 (MQ=255)
                                                                       ggcaaaccacataccctgccggcgcggccgggtgttgcgaaggctgcatagcggcctccaaaaccttcaggcaaaaaaAAGGCCCGAGCGCTTGC‑T‑TCGGGc                                                                                                                                <  2:1858214‑M1/24‑1 (MQ=255)
                                                                        ggTTCCGCTGAAGGCGTAATCAGGCCGCTGTAAACAGTCTCACCAGGTCGAGGGACTAGACACCTCTCAACCTTTCCAAGGCCCGAGCGCTTGC‑T‑TCGGGCCTTTTTTTTGCCTGAAGGTTTTGGAGGCCGCTATGCAGCCTTCGCAaca                                                                               <  1:820867/150‑1 (MQ=255)
                                                                         gTTCCGCTGAAGGCGTAATCAGGCCGCTGTAAACAGTCTCACCAGGTCGAGGGACTAGACACCTCTCAACCTTTCCAAGGCCCGAGCGCTTGC‑T‑TCGGGCCTTTTTTTTGCCTGAAGGTTTTGGAGGCCGCTATGCAGCCTTCGCAacac                                                                              <  2:843641/150‑1 (MQ=255)
                                                                          ttCCGCTGAAGGCGTAATCAGGCCGCTGTAAACAGTCCCACCACCTCCAGGGACTAAACACCTCTCAACGCGGCCGAAGGCGGGGCGCTGGC‑T‑TCGGGCCTTTTTTTTGCCTGAAGGTTTTGGAGGCCGCTCTGCAGCCTTCGCAACAcc                                                                             >  2:882226/1‑150 (MQ=255)
                                                                           aaccacataccctgccggcgcggccgggtgttgcgaaggctgcatagcggcctccaaaaccttcaggcaaaaaaAAGGCCCGAGCGCTTGC‑T‑TCGGGCCtttttttt                                                                                                                       <  1:2254593‑M1/33‑1 (MQ=255)
                                                                           aaccacataccctgccggcgcggccgggtgttgcgaaggctgcatagcggcctccaaaaccttcaggcaaaaaaAAGGCCCGAGCGCTTGC‑T‑TCGGGCCtttttttt                                                                                                                       >  2:2254593‑M1/75‑107 (MQ=255)
                                                                            ccGCTGAAGGCGTAATCAGGCCGCTGTAAACAGTCTCACCAGGTCGAGGGACTAGACACCTCTCAACCTTTCCAAGGCCCGAGCGCTTGC‑T‑TCGGGCCTTTTTTTTGCCTGAAGGTTTTGGAGGCCGCTATGCAGCCTTCGCAACACCCg                                                                           >  2:901969/1‑150 (MQ=255)
                                                                              gCTGAAGGCGTAATCAGGCCGCTGTAAACAGTCTCACCAGGTCGAGGGACTAGACACCTCTCAACCTTTCCAAGGCCCGAGCGCTTGC‑T‑TCGGGCCTTTTTTTTGCCTGAAGGTTTTGGAGGCCGCTATGCAGCCTTCGCAACACCCGGc                                                                         >  1:730600/1‑150 (MQ=255)
                                                                                 gAAGGCGTAATCAGGCCGCTGTAAACAGTCTCACCAGGTCGAGGGACTAGACACCTCTCAACCTTTCCAAGGCCCGAGCGCTTGC‑T‑TCGGGCCTTTTTTTTGCCTGAATGTTTTGGAGGCCGCTATGCAGCCTTCGCAACACCCGGCcgc                                                                      >  2:2076838/1‑150 (MQ=255)
                                                                                     gCGTAATCAGGCCGCTGTAAACAGTCTCACCAGGTCGAGGGACTAGACACCTCTCAACCTTTCCAAGGCCCGAGCGCTTGC‑T‑TCGGGCCTTTTTTTTGc                                                                                                                     <  1:2008834/99‑1 (MQ=255)
                                                                                     gCGTAATCAGGCCGCTGTAAACAGTCTCACCAGGTCGAGGGACTAGACACCTCTCAACCTTTCCAAGGCCCGAGCGCTTGC‑T‑TCGGGCCTTTTTTTTGc                                                                                                                     >  2:2008834/1‑99 (MQ=255)
                                                                                          aTCAGGCCGCTGTAAACAGTCTCACCAGGTCGAGGGACTAGACACCTCTCAACCTTTCCAAGGCCCGAGCGCTTGC‑T‑TCGGGCCTTTTTTTTGCCTGAAGGTTTTGGAGGCCGCTATGCAGCCTTCGCAACACCCGGCCGCGCCGGCAgg                                                             <  2:1875753/150‑1 (MQ=255)
                                                                                           tCAGGCCGCTGTAAACAGTCTCACCAGGTCGAGGGACTAGACACCTCTCAACCTTTCCAAGGCCCGAGCGCTTGC‑T‑TCGGGCCTTTTTTTTGCCTGAAGGTTTTGGAGGCCGCTATGCAGCCTTCGCAACACCCGGCCGCGCCGGCAggg                                                            <  2:794732/150‑1 (MQ=255)
                                                                                              ggCCGCTGTAAACAGTCTCACCAGGTCGAGGGACTAGACACCTCTCAACCTTTCCAAGGcc                                                                                                                                                    <  2:2405916/61‑1 (MQ=255)
                                                                                              ggCCGCTGTAAACAGTCTCACCAGGTCGAGGGACTAGACACCTCTCAACCTTTCCAAGGcc                                                                                                                                                    >  1:2405916/1‑61 (MQ=255)
                                                                                               gCCGCTGTAAACAGTCTCACCAGGTCGAGGGACTAGACACCTCTCAACCTTTCCAAGGCCCGAGCGCTTGC‑T‑TCGGGCCTTTTTTTTACCTGAAGGTTTTGGAGGCCGCTATGCAGCCTTCGCAACACCCGGCCGCGCCGGCAGGGTAtg                                                        >  2:716000/1‑150 (MQ=255)
                                                                                                   cTGTAAACAGTCTCACCAGGTCGAGGGACTAGACACCTCTCAACCTTTCCAAGGCCCGAGCGCTTGC‑T‑TCGGGCCTTTTTTTTGCCTGAAGGTTTTGGAGGCCGCTATGCAGCCTTCGCAACACCCGGCCGCGCCGGCAGGGTATGTGGt                                                    <  1:1840315/150‑1 (MQ=255)
                                                                                                       aaaCAGTCTCACCAGGTCGAGGGACTAGACACCTCTCAACCTTTCCAAGGCCCGAGCGCTTGC‑T‑TCGGGCCTTTTTTTTGCCTGAAGGTTTTGGAGGCCGCTATGCAGCCTTCGCAACACCCGGCCGCGCCGGCAGGGTATGTGGTTTGc                                                <  2:1313148/150‑1 (MQ=255)
                                                                                                       aaaCAGTCTCACCAGGTCGAGGGACTAGACACCTCTCAACCTTTCCAAGGCCCGAGCGCTTGC‑T‑TCGGGCCTTTTTTTTGCCTGAAGGTTTTGGAGGCCGCTATGCAGCCTTCGCAACACCCGGCCGCGCCGGCAGGGTATGTGGTTTGc                                                <  1:1519780/150‑1 (MQ=255)
                                                                                                         aaaGTCTCACCAGGTCGAGGGACTAGACACCTCTCAACCTTTCCAAGGCCCGAGCGCTTGC‑T‑TCGGGCCTTTTTTTTGCCTGAAGGTTTTGGAGGCCGCTATGCAGCCTTCGCAACACCCGGCCGCGCCGGCAGGGTAtg                                                        <  2:345002/138‑1 (MQ=255)
                                                                                                         aCAGTCTCACCAGGTCGAGGGACTAGACACCTCTCAACCTTTCCAAGGCCCGAGCGCTTGC‑T‑TCGGGCCTTTTTTTTGCCTGAAGGTTTTGGAGGCCGCTATGCAGCCTTCGCAACACCCGGCCGCGCCGGCAGGGTAtg                                                        >  1:345002/1‑140 (MQ=255)
                                                                                                         aCAGTCTCACCAGGTCGAGGGACTAGACACCTCTCAACCTTTCCAAGGCCCGAGCGCTTGC‑T‑TCGGGCCTTTTTTTTGCCTGAAGGTTTTGGAGGCCGCTATGCAGCCTTCGCAACACCCGGCCGCGCCGGCAGGGTATGTGGTTTGCCt                                              <  1:1813471/150‑1 (MQ=255)
                                                                                                             tctcACCAGGTCGAGGGACTAGACACCTCTCAACCTTTCCAAGGCCCGAGCGCTTGC‑T‑TCGGGCCTTTTTTTTGCCTGAAGGTTTTGGAGGCCGCTATGCAGCCTTCGCAACACCCGGCCGCGCCGGCAGGGTATGTGGTTTGCCTGCAg                                          >  2:1501171/1‑150 (MQ=255)
                                                                                                              ctcACCAGGTCGAGGGACTAGACACCTCTCAACCTTTCCAAGGCCCGAGCGCTTGC‑T‑TCGGGCCTTTTTTTTGCCTGAAGGTTTTGGAGGCCGCTATGCAGCCTTCGCAACACCCGGCCGCGCCGGCAGGGTATGTGGTTTGCCTGCAGc                                         <  2:206065/150‑1 (MQ=255)
                                                                                                               tcACCAGGTCGAGGGACTAGACACCTCTCAACCTTTCCAAGGCCCGAGCGCTTGC‑T‑TCGGGCCTTTTTTTTGCCTGAAGGTTTTGGAGGCCGCTATGCAGCCTTCGCAACACCCGGCCGCGCCGGCAGGGTATGTGGTTTGCCTGCAGcc                                        >  2:1394816/1‑150 (MQ=255)
                                                                                                               tcACCAGGTCGAGGGACTAGACACCTCTCAACCTTTCCAAGGCCCGAGCGCTTGC‑T‑TCGGGCCTTTTTTTTGCCTGAAGGTTTTGGAGGCCGCTATGCAGCCTTCGCAACACCCGGCCGCGCCGGCAGGGTATGTGGTTTGCCTGCAGcc                                        >  1:580362/1‑150 (MQ=255)
                                                                                                                 aCCAGGTCGAGGGACTAGACACCTCTCAACCTTTCCAAGGCCCGAGCGCTTGC‑T‑TCGGGCCTTTTTTTTGCCTGAAGGTTTTGGAGGCCGCTATGCAGCCTTCGCAACACCCGGCCGCGCCGGCAGGGTATGTGGtt                                                   >  1:2080688/1‑137 (MQ=255)
                                                                                                                 aCCAGGTCGAGGGACTAGACACCTCTCAACCTTTCCAAGGCCCGAGCGCTTGC‑T‑TCGGGCCTTTTTTTTGCCTGAAGGTTTTGGAGGCCGCTATGCAGCCTTCGCAACACCCGGCCGCGCCGGCAGGGTATGTGGtt                                                   <  2:2080688/137‑1 (MQ=255)
                                                                                                                  ccAGGTCGAGGGACTAGACACCTCTCAACCTTTCCAAGGCCCGAGCGCTTGC‑T‑TCGGGCCTTTTTTTTGCCTGAAGGTTTTGGAGGCCGCTATGCAGCCTTc                                                                                     <  1:2074245/102‑1 (MQ=255)
                                                                                                                    aGGTCGAGGGACTAGACACCTCTCAACCTTTCCAAGGCCCGAGCGCTTGC‑T‑TCGGGCCTTTTTTTTGCCTGACGGTTTTTGGTGTCGCTATGCAGCCTTCGCAACACCCGGCCGCGCCGGCAGGGTATGTGGTTTGCCTGCAGCCCCGGa                                   >  2:1771565/1‑150 (MQ=255)
                                                                                                                    aGGTCGAGGGACTAGACACCTCTCAACCTTTCCAAGGCCCGAGCGCTTGC‑T‑TCGGGCCTTTTTTTTGCCTGAAGGTTTTGGAGGCCGCTATGCAGCCTTCGCAACACCCGGCCGCGCCGGCAGGGTATGTGGTTTGCCTGCAGCCCCGGa                                   >  2:741911/1‑150 (MQ=255)
                                                                                                                        cGAGGGACTAGACACCTCTCAACCTTTCCAAGGCCCGAGCGCTTGC‑T‑TCGGGCCTTTTTTTTGCCTGAAGGTTTTGGAGGCCGCTATGCAGCCTTCGCAACACCCGGCCGCGCCGGCAGGGTATGTGGTTTGCCTGCAGCCCCGGATATc                               <  2:1968074/150‑1 (MQ=255)
                                                                                                                         gAGGGACTAGACACGTATCAAACTTTCCAAGGCCCGCGTGCTTGC‑G‑TCGGGCCTTTTTTTTGCCTGAAGGTTTTGGAGGCTGCGATTGAGCCGTCGCAAGACAAGGCCGAGCCGGCAGGTTATGGGGTTTTCTTGGAGTCTCGGGTATCg                              >  2:954776/1‑150 (MQ=255)
                                                                                                                         gAGGGACTAGACACCTCTCAACCTTTCCAAGGCCCGAGCGCTTGC‑T‑TGGGGCCTTTTTTTTGCCTGAAGGTTTTGGAGGCCGCTATGCAGCCTTCGCAACACCCGGCCGAGCCGGCAGGGGATGTGGTTTGCGTGCAGCCCCGGatattg                              >  1:604782/1‑148 (MQ=255)
                                                                                                                           gggACTAGACACCTCTCAACCTTTCCAAGGCCCGAGCGCTTGC‑T‑TCGGGCCTTTTTTTTGCCTGAAGGTTTTGGAGGCCGCTATGCAGCCTTCGCAACACCCGGCCGCGCCGGCAGGGTATGTGGTTTGCCTGCAGCCCCGGATATCGGc                            >  1:1775783/1‑150 (MQ=255)
                                                                                                                           gggACTAGACACCTCTCAACCTTTCCAAGGCCCGAGCGCTTGC‑T‑TCGGGCCTTTTTTTTGCCTGAAGGTTTTGGAGGCCGCTATGCAGCCTTCGCAACACCCGGCCGCGCCGGCAGGGTATGTGGTTTGCCTGCAGCCCCGGATATCGGc                            >  2:243087/1‑150 (MQ=255)
                                                                                                                            ggACTAGGCACCTCTCAACCTTTCCAAGGCCCGAGCGCTTGC‑T‑TCTGGCCTTTTTTTTGCCTGAAGGTTTTGGAGGACGATATGCAGCCTTCGCAACACCCGGCCGCGCCGGCAGGGTATGTGGTTTGCCTGCAGCCCCGGATATCGGca                           <  2:467286/150‑1 (MQ=255)
                                                                                                                            ggACTAGACCCCTCTCAACCTTTCCCAGGCCCGAGCGCTTGC‑T‑TCGGGCCTTTTTTTTGCCTGAAGGTTTTGGAGGCCGCTATGCAGCCTTCGCAACACCCGGCCGCGCCGGCAGGGTATGTGGTTTGCCTGCAGCCCCGGATATCGGca                           <  2:604782/150‑1 (MQ=255)
                                                                                                                            ggACTAGACACCTCTCAACCTTTCCAAGGCCCGAGCGCTTGC‑T‑TCGGGCCTTTTTTTTGCCTGAAGGTTTTGGAGGCCGCTATGCAGCCTTCGCAACACCCGGCCGCGCCGGCAGGGTATGTGGTTTGCCTGCAGCCCCGGATATCgg                             <  1:1473995/148‑1 (MQ=255)
                                                                                                                            ggACTAGACACCTCTCAACCTTTCCAAGGCCCGAGCGCTTGC‑T‑TCGGGCCTTTTTTTTGCCTGAAGGTTTTGGAGGCCGCTATGCAGCCTTCGCAACACCCGGCCGCGCCGGCAGGGTATGTGGTTTGCCTGCAGCCCCGGATATCgg                             >  2:1473995/1‑148 (MQ=255)
                                                                                                                            ggACTAGACACCTCTCAACCTTTCCAAGGCCCGAGCGCTTGC‑T‑TCGGGCCTTTTTTTTGCCTGAAGGTTTTGGAGGCCGCTATGCAGCCTTCGCAACACCCGGCCGCGCCGGCAGGGTATGTGGTTTGCCTGCAGCCCCGGATATCGGca                           <  2:1775783/150‑1 (MQ=255)
                                                                                                                             gACTAGACACCTCTCAACCTTTCCAAGGCCCGAGCGCTTGC‑T‑TCGGGCCTTTTTTTTGCCTGAAGGTTTTGGAGGCCGCTATGCAGCCTTCGCAACACCCGGCCGCGCCGGCAGGGTATGTGGTTTGCCTGCAGCCCCGGATATCGGcac                          >  2:771741/1‑150 (MQ=255)
                                                                                                                                  gACACCTCTCAACCTTTCCAAGGCCCGAGCGCTTGC‑T‑TCGGGCCTTTTTTTTGTCTGAAGGTTTTGGAGGCCGCTATGCAGCCTTCGCAACACCCGGCCGCGCCGGCAGGGTATGTGGTTTGCCTGCAGCCCCGGATATCGGCACATAAc                     >  2:1977650/1‑150 (MQ=255)
                                                                                                                                  aaaaccttcaggcaaaaaaAAGGCCCGAA‑GCAAGCGC‑TCGGGCCTTTTTTTTGCCTGAAGGTTTTGGAGGCCGCTATGCAGCCTTCGCAACACCCGGCCGCGCCGGCAGGGTAtgt                                                       <  2:361827‑M1/97‑1 (MQ=255)
                                                                                                                                  aaaaccttcaggcaaaaaaAAGGCCCGAA‑GCAAGC‑GCTCGGGCCTTTTTTTTGCCTGAAGGTTTTGGAGGCCGCTATGCAGCCTTCGCAACACCCGGCCGCGCCGGCAGGGTAtgt                                                       >  1:361827‑M1/20‑116 (MQ=255)
                                                                                                                                     acCTCTCAACCTTTCCAAGGCCCGAGCGCTTGC‑T‑TCGGGCCTTTTTTTTGCCTGAAGGTTTTGGAGGCCGCTATGCAGCCTTCGCAACACCCGGCCGCGCCGGCAGGGTATGTGGTTTGCCTGCAGCCCCg                                     >  2:2208047/1‑131 (MQ=255)
                                                                                                                                     acCTCTCAACCTTTCCAAGGCCCGAGCGCTTGC‑T‑TCGGGCCTTTTTTTTGCCTGAAGGTTTTGGAGGCCGCTATGCAGCCTTCGCAACACCCGGCCGCGCCGGCAGGGTATGTGGTTTGCCTGCAGCCCCg                                     <  1:2208047/131‑1 (MQ=255)
                                                                                                                                     acCTCTCAACCTTTCCAAGGCCCGAGCGCTTGC‑T‑TCGGGCCTTTTTTTTGCCTGAAGGTTTTGGAGGCCGCTATGCAGCCTTCGCAACACCCGGCCGCGCCGGCAGGGTATGTGGTTTGCCTGCAGCCCCGGATATCGGAACATAACTTg                  <  2:730600/150‑1 (MQ=255)
                                                                                                                                     acCTCTCAACCTTTCCAAGGCCCGAGCGCTTGC‑T‑TCGGGCCTTTTTTTTGCCTGAAGGTTTTGGAGACCGGGATGCAGCCTTCGCAACACCCGGCCGCGCCGGCAGGGTATGTGGTTTGCCTGCAGCCCCGGATATCGGCACATAACTTg                  >  1:1375009/1‑150 (MQ=255)
                                                                                                                                         ctcAACCTTTCCAAGGCCCGAGCGCTTGC‑T‑TCCGGCCTTTTTTTTGCCTGAAGGTTTTGGAGGCCGCTATGCAGCCTTCGCAACACCCGGCCGCGCCGGCAGGGTATGTGGTTTGCCTGCAGCCCAGGATATCGGCACATAACTTGCTcc              <  1:954776/150‑1 (MQ=255)
                                                                                                                                          tcAACCTTTCCAAGGCCCGAGCGCTTGC‑T‑TCGGGCCTTTTTTTTGCCTGAAGGTTTTGGAGGCCGCTATGCAGCCTTCGCAACACCCGGCCGCGCCGGCAGGGTATGTGGTTTGCCTGCAGCCCCGGATATCGGCACATAACTTGCTCCg             >  2:1239290/1‑150 (MQ=255)
                                                                                                                                          tcAACCTTTCCAAGGCCCGAGCGCTTGC‑T‑TCGGGCCTTTTTTTTGCCTGAAGGTTTTGGAGGCCGCTATGCAGCCTTCGCAACACCCGGCCGCGCCGGCAGGGTATGTGGTTTGCCTGCAGCCCCGGATATCGGCACATAACTTGCTCCg             <  1:1239290/150‑1 (MQ=255)
                                                                                                                                           aggcaaaaaaAAGGCCCGAA‑GCAAGC‑GCTCGGGCCTTTATTTTGCCTAAAGGTTTGGGAGGCGGCTATGCAGCCTTCGCAACACCCGGCCGCGCCGGCAGGGTATGTGGTTTGCCTGCAGCCCCGGATATCGGCACATAACTTGCTCCGt            <  1:298380‑M1/140‑1 (MQ=255)
                                                                                                                                               cTTTCCAAGGCCCGAGCGCTTGC‑T‑TCGGGCCTTTTTTTTGCCTGAAGGTTTTGGAGGCCGCTATGCAGCCTTCGCAACACCCGGCCGCGCCGGCAGGGTATGTGGTTTGCCTGCAGCCCCGGATATCGGCACATAACTTGCTCCGTAATg        >  1:196213/1‑150 (MQ=255)
                                                                                                                                                   ccAAGGCCCGAGCGCTTGC‑T‑TCGGGCCTTTTTTTTGCCTGAAGGTTTTGGAGGCCGCTATGCAGCCTTCGCAACACCCGGCCGCGCCGGCAGGGTATGTGGTTTGCCTGCAGCCCCGGATATCGGCACATAACTTGCTCCGTAATGCGTc    >  2:1515242/1‑150 (MQ=255)
                                                                                                                                                    cAAGGCCCGAGCGCTTGC‑T‑TCGGGCCTTTTTTTTGCCTGAAGGTTTTGGAGGCCGCTATGCAGCCTTCGCAACACCCGGCCGCGCCGGCAGGGTATGTGGTTTGCCTGCAGCCCCGGATATCGGCACATAACTTGCTCCGTAATGCGTcc   >  2:2210158/1‑150 (MQ=255)
                                                                                                                                                    cAAGGCCCGAGCGCTTGC‑G‑TCGGGCCTTTTTTTTGCCTGAAGGTTTTGGAGGCCGCTATGCAGCCTTCGCAACACCCGGCCGCGCCGGCAGGGTATGTGGTTTGCCTGCAGCCCCGGATATCGGCACACAACTTGCTCCGTAATGCATcc   >  2:284538/1‑150 (MQ=255)
                                                                                                                                                     AAGGCCCGAGCGCTTGC‑T‑TCGGGCCTTTTTTTTGCCTGAAGGTTTTGGAGGCCGCTATGCAGCCTTCGCAACACCCGGCCGCGCCGGCAGGGTATGTGGTTTGc                                                <  1:1094783‑M1/104‑1 (MQ=255)
                                                                                                                                                     AAGGCCCGAGCGCTTGC‑T‑TCGGGCCTTTTTTTTGCCTGAAGGTTTTGGAGGCCGCTATGCAGCCTTCGCAACACCCGGCCGCGCCGGCAGGGTATGTGGTTTGc                                                >  2:1094783‑M1/1‑104 (MQ=255)
                                                                                                                                                     AAGGCCCGAGCGCTTGC‑T‑TCGGGCCTTTTTTTTGCCTGAAGGTTTTGGAGGCCGCTATGCAGCCTTCGCAACACCCGGCCGCGCCGGCAGGGTATGTGGTTTGCCTGCAGCCCCGGATATCGGCACATAACTTGCTCCGTAATGCGTccc  <  2:1072326‑M1/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                       
GAAGAGAAGCTGCTGGACGACGCGATGCTCGACGACATCCTGCGTCCGGAAAACATGATCGCTC‑CACGTCTGGTTCCGCTGAAGGCGTAATCAGGCCGCTGTAAACAGTCTCACCAGGTCGAGGGACTAGACACCTCTCAACCTTTCCAAGGCCCGAGCGCTTGC‑T‑TCGGGCCTTTTTTTTGCCTGAAGGTTTTGGAGGCCGCTATGCAGCCTTCGCAACACCCGGCCGCGCCGGCAGGGTATGTGGTTTGCCTGCAGCCCCGGATATCGGCACATAACTTGCTCCGTAATGCGTCCC  >  NC_002947/6086294‑6086591

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.