New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1156328 =50 (0.560)18 (0.260) 13/196 NT 33.1% intergenic (+25/‑191) PP_1013/yihS sensor histidine kinase/aldose‑ketose isomerase
?NC_002947 1156401 = 33 (0.470)intergenic (+98/‑118) PP_1013/yihS sensor histidine kinase/aldose‑ketose isomerase

Only 100 of 101 total aligned reads displayed.

GCGGGAGGGCGGGCTGCGGGTGACCCTGTATCTGCCGCGGGGTATGGATTGAGTTTTTGGGGTGCCTGTGCGGGCTTCTTCGCGGGTGAACCCGCTCCTACAACGACCGAGTCAGGTTTGCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGCA‑CCCAAAATGTCACTGCCCGGTGACAATCCCGTCGTCCTTCGTGACATCCGCCATGACCCCGCTGGCTAGAATTCGCAAACGACTGGCAAGGATCAAGCTGGCCCATGACCCCCCTCAACCTGTATGTGAACAGTTG  >  NC_002947/1156252‑1156550
                                                                                                                                                     |                                                                                                                                                      
gcggggtcatggcggatgtcacgaaggacgacgggattgtcaccgggcagtgacattttgggtgcctgtgcgggccTCTTCGCGGGTGAACCCGCTCCTACAACGACCGAGTCAGGTTTGCGTCGTAGGAGCGGGTTCACCCGCGAagag                                                                                                                                                        >  2:1300296‑M1/77‑150 (MQ=255)
gCGGGAGGGCGGGCTGCGGGTGACCCTGTATCTGCCGCGGGGTATGGATTGAGTTTTTGGGGTGCCTGTGCGGGCTTCTTCGCGGGTGAACCCGCTCCTACAACGACCGAGTCAGGTTTGCGTCGTAGGAGCGGGTTCACCCGCGAagag                                                                                                                                                        >  1:1539642/1‑150 (MQ=255)
  gggAGGGCGGGCTGCGGGTGACCCTGTATCTGCCGCGGGGTATGGATTGAGTTTTTGGGGTGCCTGTGCGGGCTTCTTCGCGGGTGAACCCGCTCCTACAACGACCGAGTCAGGTTTGCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGc                                                                                                                                                      <  2:1310764/150‑1 (MQ=255)
        gcgggcTGCGGGTGACCCTGTATCTGCCGCGGGGTATGGATTGAGTTTTTGGGGTGCCTGTGCGGGCTTCTTCGCGGGTGAACCCGCTCCTACAACGACCGAGTCAGGTTTGCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGcac                                                                                                                                                >  1:1414866/1‑150 (MQ=255)
          gggcTGCGGGTGACCCTGTATCTGCCGCGGGGTATGGATTGAGTTTTTGGGGTGCCTGTGCGGGCTTCTTCGCGGGTGAACCCGCTCCTACAACGACCGAGTCAGGTTTGCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAg                                                                                                                                              <  1:1199166/150‑1 (MQ=255)
          gggcTGCGGGTGACCCTGTATCTGCCGCGGGGTATGGATTGAGTTTTTGGGGTGCCTGTGCGGGCTTCTTCGCGGGTGAACCCGCTCCTACAACGACCGAGTCAGGTTTGCGTCGTAGGACCGGGTTCACCCGCGAAGAGGCCCGCACAg                                                                                                                                              <  1:1717632/150‑1 (MQ=255)
            gcTGCGGGTGACCCTGTATCTGCCGCGGGGTATGGATTGAGTTTTTGGGGTGCCTGTGCGGGCTTCTTCGCGGGTGAACCCGCTCCTACAACGACCGAGTCAGGTTTGCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGc                                                                                                                                            >  2:599082/1‑150 (MQ=255)
                        ccTGTATCTGCCGCGGGGTATGGATTGAGTTTTTGGGGTGCCTGTGCGGGCTTCTTCGCGGGTGAACCCGCTCCTACAACGACCGAGTCAGGTTTGCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGCA‑CCCAAAATGTc                                                                                                                               >  2:690190/1‑150 (MQ=255)
                         cTGTATCTGCCGCGGGGTATGGATTGAGTTTTTGGGGTGCCTGTGCGGGCTTCTTCGCGGGTGAACCCGCTCCTACAACGACCGAGTCAGGTTTGCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGCA‑CCCAAAATGTCa                                                                                                                              <  1:1128776/150‑1 (MQ=255)
                                  ccGCGGGGTATGGATTGAGTTTTTGGGGTGCCTGTGCGGGCTTCTTCGCGGGTGAACCCGCTCATACAACGACCGAGTCAGGTTTGCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGCA‑CCCAAAATGTCACTGCCCGGt                                                                                                                     <  2:2222062/150‑1 (MQ=255)
                                   cgcgGGGTATGGATTGAGTTTTTGGGGTGCCTGTGCGGGCTTCTTCGCGGGTGAACCCGCTCCTACAACGACCGAGTCAGGTTTGCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGCA‑CCCAAAATGTCACTGCCCGGTg                                                                                                                    <  2:1414866/150‑1 (MQ=255)
                                    gcgGGGTATGGATGGAGTTTTTGGGGTGCCTGTGCGGGCTTCTTCGCGGGTGAACCCGCTCCTACAACGACCGAGTCAGGTTTGCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGCA‑CCCAAAATGTCACTGCCCGGTGa                                                                                                                   <  2:669832/150‑1 (MQ=255)
                                       gggTATGGATTGAGTTTTTGGGGTGCCTGTGCGGGCTTCTTCGCGGGTGAACCCGCTCCTACAACGACCGAGTCAGGTTTGCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGCA‑CCCAAAATGTCACTGCCCGGTGACaa                                                                                                                <  1:435118/150‑1 (MQ=255)
                                         gTATGGATTGAGTTTTTGGGGTGCCTGTGCGGGCTTCTTCGCGGGTGAACCCGCTCCTACAACGACCGAGTCAGGTTTGCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGCA‑CCCAAAATGTCACTGCCCGGTGACAATc                                                                                                              >  2:2162701/1‑150 (MQ=255)
                                          tATGGATTGAGTTTTTGGGGTGCCTGTGCGGGCTTCTTCGCGGGTGAACCCGCTCCTACAACGACCGAGTCAGGTTTGCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGc                                                                                                                                                      <  2:2117130/110‑1 (MQ=255)
                                          tATGGATTGAGTTTTTGGGGTGCCTGTGCGGGCTTCTTCGCGGGTGAACCCGCTCCTACAACGACCGAGTCAGGTTTGCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGc                                                                                                                                                      >  1:2117130/1‑110 (MQ=255)
                                                ttGAGTTTTTGGGGTGCCTGTGCGGGCTTCTTCGCGGGTGAACCTGCTCCTACAACGACCGAGTCAGGTTTGCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGCA‑CCCAAAATGTCACTGCCCGGTGACAATc                                                                                                              >  2:1552516/1‑143 (MQ=255)
                                                ttGAGTTTTTGGGGTGCCTGTGCGGGCTTCTTCGCGGGTGAACCTGCTCCTACAACGACCGAGTCAGGTTTGCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGCA‑CCCAAAATGTCACTGCCCGGTGACAATc                                                                                                              <  1:1552516/143‑1 (MQ=255)
                                                     tttttGGGGTGCCTGTGCGGGCTTCTTCGCGGGGGAACCCGCTCCTACAACGACCGAGTCAGGTTTGCGTCGTAGGGGCGGGATCACCCGCGAAGAGGCCCGCACAGGCA‑CCCAAAATGTCACTGCCCGGAGACCATCCCGTCGTCCTTc                                                                                                  >  1:1038760/1‑150 (MQ=39)
                                                             gTGCCTGTGCGGGCTTCTTCGCGGGTGAACCCGCTCCTACAACGACCGAGTCAGGTTTGCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGCA‑CCCAAAATGTCACTGCCCGGTGACAATCCCGTCGTCCTTCGTGACATc                                                                                          >  1:627478/1‑150 (MQ=255)
                                                                  tgtgCGGGCTTCTTCGCGGGTGAACCCGCTCCTACAACGACCGAGTCAGGTTTGCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGCA‑CCCAAAATGTCACTGCCCGGTGACAATCCCGTCGTCCTTCGTGACATCCGCCa                                                                                     <  1:2162701/150‑1 (MQ=255)
                                                                       gggCTTCTTCGCGGGTGAACCCGCTCCTACAACGACCGAGTCAGGTTTGCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGCA‑CCCAAAATGTCACTGCCCGGTGACAATCCCGTCGTCCTTCGTGACATCCGCCATGAcc                                                                                >  2:1092931/1‑150 (MQ=255)
                                                                       gggCTTCTTCGCGGGTGAACCCGCTCCTACAACGACCGAGTCAGGTTTGCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGCA‑CCCAAAATGTCACTGCCCGGTGACAATCCCGTCGTCCTTCGTGACATCCGCCATGAcc                                                                                >  2:1705336/1‑150 (MQ=255)
                                                                         gCTTCTTCGCGGGTGAACCCGCTCCTACAACGACCGAGTCAGGTTTGCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAg                                                                                                                                              >  2:431430/1‑87 (MQ=255)
                                                                         gCTTCTTCGCGGGTGAACCCGCTCCTACAACGACCGAGTCAGGTTTGCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAg                                                                                                                                              <  1:431430/87‑1 (MQ=255)
                                                                           ttcttcGCGGGTGAACCCGCTCCTACAACGACCGAGTCAGGTTTGCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGCA‑CCCAAAATGTCACTGCCCGGt                                                                                                                     <  2:796701/109‑1 (MQ=255)
                                                                           ttcttcGCGGGTGAACCCGCTCCTACAACGACCGAGTCAGGTTTGCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGCA‑CCCAAAATGTCACTGCCCGGt                                                                                                                     >  1:796701/1‑109 (MQ=255)
                                                                           ttcttcGCGGGTGAACCCGCTCCTACAACGACCGAGTCAGGTTTGCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGCA‑CCCAAAATGTCACTGCCCGGt                                                                                                                     >  1:1992614/1‑109 (MQ=255)
                                                                           ttcttcGCGGGTGAACCCGCTCCTACAACGACCGAGTCAGGTTTGCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGCA‑CCCAAAATGTCACTGCCCGGt                                                                                                                     <  2:1992614/109‑1 (MQ=255)
                                                                           ctcttcgcgggtgaacccgctcctacgacgcaaacctgactcggtcgttgtaggagcgggttcacccgcgaagaGGCCCGCACAGGCA‑CCCAAAATGTCACTGCCCGGTGACAATCCCGTCGTCCTTCGTGACATCCGCCATGACCCCGc                                                                            >  2:1300296‑M2/75‑150 (MQ=255)
                                                                              TTCGCGGGTGAACCCGCTCCTACAACGACCGAGTCAGGTTTGCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGCA‑CCCAAAATGTCACTGCCCGGTGACAATCCCGTCGTCCTTCGt                                                                                                <  2:808097‑M1/127‑1 (MQ=255)
                                                                              TTCGCGGGTGAACCCGCTCCTACAACGACCGAGTCAGGTTTGCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGCA‑CCCAAAATGTCACTGCCCGGTGACAATCCCGTCGTCCTTCGt                                                                                                >  1:808097‑M1/1‑127 (MQ=255)
                                                                              TTCGCGGGTGAACCCGCTCCTACAACGACCGAGTCAGGTTTGCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGCA‑CCCAAAATGTCACTGCCCGGTGACAATCCCGTCGTCCTTCGTGACATCCGCCATGACCCCGCTgg                                                                         <  1:1942493‑M1/150‑1 (MQ=255)
                                                                                   GGGTGAACCCGCTCCTACAACGACCGAGTCAGGTTTGCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTA‑CCCAAAATGTCACTGCCCGGTGACAATCCCGTCGTCCGTCGTGACATCCGCCATGACCCCGCTGGCTAGa                                                                    <  1:162081‑M1/150‑1 (MQ=255)
                                                                                   GGGTGAACCCGCTCCTACAACGACCGAGTCAGGTTTGCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGCA‑CCCAAAATGt                                                                                                                                >  2:2064701‑M1/1‑90 (MQ=255)
                                                                                   GGGTGAACCCGCTCCTACAACGACCGAGTCAGGTTTGCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGCA‑CCCAAAATGt                                                                                                                                <  1:2064701‑M1/90‑1 (MQ=255)
                                                                                     GTGAACCCGCTCCTACAACGACCGAGTCAGGTTTGCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAg                                                                                                                                              >  2:729695‑M1/1‑75 (MQ=255)
                                                                                     GTGAACCCGCTCCTACAACGACCGAGTCAGGTTTGCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAg                                                                                                                                              <  1:729695‑M1/75‑1 (MQ=255)
                                                                                          cccgctcctacgacgcaaacctgactcggtcgttgtaggagcgggttcacccgcgaagaGGCCCGCACAGGCA‑c                                                                                                                                         <  1:255604‑M2/15‑1 (MQ=255)
                                                                                          cccgctcctacgacgcaaacctgactcggtcgttgtaggagcgggttcacccgcgaagaGGCCCGCACAGGCA‑c                                                                                                                                         >  2:255604‑M2/60‑74 (MQ=255)
                                                                                          cccgctcctacgacgcaaacctgactcggtcgttgtaggagcgggttcacccgcgaagaGGCCCGCACAGGCA‑CCCAAAATGTCACTGCCCGGTGACAATCCCGTCGTCCTTCGTGACATCCGCCATGACCCCGCTGGCTAGAATTCGCa                                                             >  1:1051738‑M2/60‑150 (MQ=255)
                                                                                          cccgctcctacgacgcaaacctgactcggtcgttgtaggagcgggttcacccgcgaagaAGCCCGCACAGGCA‑CCCAAAATGTCACTGCCCGGTGACAATCCCGTCGTCCTTCGTGACATCCGCCATGACCCCGCTGGCt                                                                       >  2:186252‑M2/60‑140 (MQ=255)
                                                                                          cccgctcctacgacgcaaacctgactcggtcgttgtaggagcgggttcacccgcgaagaAGCCCGCACAGGCA‑CCCAAAATGTCACTGCCCGGTGACAATCCCGTCGTCCTTCGTGACATCCGCCATGACCCCGCTGGCt                                                                       <  1:186252‑M2/81‑1 (MQ=255)
                                                                                           ccgctcctacgacgcaaacctgactcggtcgttgtaggagcgggttcacccgcgaagaGGCCCGCACAGGCA‑CCCAAAATGTCACTGCCCGGTGACAATCCCGTCGTCCTTCGTGa                                                                                              <  2:2335922‑M2/58‑1 (MQ=255)
                                                                                           ccgctcctacgacgcaaacctgactcggtcgttgtaggagcgggttcacccgcgaagaGGCCCGCACAGGCA‑CCCAAAATGTCACTGCCCGGTGACAATCCCGTCGTCCTTCGTGa                                                                                              >  1:2335922‑M2/59‑116 (MQ=255)
                                                                                           ccgctcctacgacgcaaacctgactcggtcgttgtaggagcgggttcacccgcgaagaGGCCCGCACAGGCA‑CCCAAAATGTCACTGCCCGGTGACAATCCCGTCGTCCTTCGTGACATCCGCCATGACCCCGCTGGCTAGAATTCGCaa                                                            >  2:1780732‑M2/59‑150 (MQ=255)
                                                                                           ccgctcctacgacgcaaacctgactcggtcgttgtaggagcgggttcacccgcgaagaAGCCCGCACAGGCA‑CCCAAAATGTCACTGCCCGGTGACAATCCCGTCGTCCTTCGTGACATCCGCCATGACCCCGCTGGCTAGAATTCGCaa                                                            >  2:1548609‑M2/59‑150 (MQ=255)
                                                                                           CCGCTCCTACAACGACCGAGTCAGGTTTGCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGCA‑CCCAAAATGTCACTGCCCGGTGACAATCCCGTCGTCCTTCGTGACATCCGCCATGACCCCGCTGGCTAGAATTCGc                                                              >  2:197895‑M1/1‑148 (MQ=255)
                                                                                           CCGCTCCTACAACGACCGAGTCAGGTTTGCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGCA‑CCCAAAATGTCACTGCCCGGTGACAATCCCGTCGTCCTTCGTGACATCCGCCATGACCCCGCTGGCTAGAATTCGc                                                              <  1:197895‑M1/148‑1 (MQ=255)
                                                                                               tcctacgacgcaaacctgactcggtcgttgtaggagcgggttcacccgcgaagaGGCCCGCACAg                                                                                                                                              <  1:1093142‑M2/11‑1 (MQ=255)
                                                                                               tcctacgacgcaaacctgactcggtcgttgtaggagcgggttcacccgcgaagaGGCCCGCACAg                                                                                                                                              >  2:1093142‑M2/55‑65 (MQ=255)
                                                                                                 ctacgacgcaaacctgactcggtcgttgtaggagcgggttcacccgcgaagaGGCCCGCACAGGCA‑CCCAAAATGTCACTGCCCGGTGACAATCCCGTCGTCCTTCGTGACATCCGCCATGACCCCGCTGGCTAGAATTCGCAAACGACt                                                      >  2:2091465‑M2/53‑150 (MQ=255)
                                                                                                  tacgacgcaaacctgactcggtcgttgtaggagcgggttcacccgcgaagaAGCCCGCACAGGCACCCCAAAATGTCACTGCCCGGTGACAATCCCGTCGTCCTTCGTGACATCCGCCATGACCCCGCTGGCTAGAAtt                                                                 <  2:566942‑M2/88‑1 (MQ=255)
                                                                                                  tacgacgcaaacctgactcggtcgttgtaggagcgggttcacccgcgaagaAGCCCGCACAGGCACCCCAAAATGTCACTGCCCGGTGACAATCCCGTCGTCCTTCGTGACATCCGCCATGACCCCGCTGGCTAGAAtt                                                                 >  1:566942‑M2/52‑139 (MQ=255)
                                                                                                  tacgacgcaaacctgactcggtcgttgtaggagcgagttcacccgcgaagaAGCCCGCACAGGCA‑CCCAAAATGTCACTGCCCGGTGACAATCCCGTCGTCCTTCGTGACATCCGCCATGACCCCGCTGGCTAGGATTCGCAAACGACTg                                                     >  2:1680723‑M2/52‑150 (MQ=255)
                                                                                                  TACAACGACCGAGTCAGGTTTGCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGCA‑CCCAAAATGTCACTGCCCGGTGACAATCCCGTCGTCCTTCGTGACATCCGCCATGACCCCGCTGGCTAGAATTCGCAAACGACTg                                                     <  2:1971313‑M1/150‑1 (MQ=255)
                                                                                                   acgacgcaaacctgactcggtcgttgtaggagcgggttcacccgcgaagaAGCCCGCACAGGCA‑CCCAAAATGTCACTGCCCGGTGACAATCCCGTCGTCCTTCGTGACATCCGCCATGACCCCGCTGGCTAGAATTCGCAAACGACTgg                                                    <  1:1548609‑M2/100‑1 (MQ=255)
                                                                                                    CAACGACCGAGTCAGGTTTGCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGCA‑CCCAAAATGTCACTGCCCGGTGACAATCCCGTCGTCCTTCGTGACATCCGc                                                                                       <  2:493822‑M1/114‑1 (MQ=255)
                                                                                                    CAACGACCGAGTCAGGTTTGCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGCA‑CCCAAAATGTCACTGCCCGGTGACAATCCCGTCGTCCTTCGTGACATCCGc                                                                                       >  1:493822‑M1/1‑114 (MQ=255)
                                                                                                     aaCGACCGAGTCAGGTTTGCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGCA‑CCCAAAATGTCACTGCCCGGTGACAATCCCGTCGTCCTTCGTGACATCCGCCATGACCCCGCTGGCTAGAATTCGCAAACGACTGGCa                                                  >  1:2402815/1‑150 (MQ=255)
                                                                                                         caaacctgactcggtcgttgtaggagcgggttcacccgcgaagaGGCCCGCACAGGCA‑CCCAAAATGTCACTGCCCGGTGACAATCCCGTCGTCCTTCGTGACATCCGCCATGACCCCGCTGGCTAGAATTCGCAAACGACTGGCAAGGa                                              <  1:2091465‑M2/106‑1 (MQ=255)
                                                                                                           cGAGTCAGGTTTGCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGCA‑CCCAAAATGTCACTGCCCGGTGACAATCCCGTCGTCCTTCGTGACATCCGCCATGACCCCGCTGGCTAGCATTCGCAAACGACTGGCAAGGATc                                            >  1:1295717/1‑150 (MQ=255)
                                                                                                             aGTCAGGTTTGCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGCA‑CCCAAAATGTCACTGCCCGGTGACAATCCCGTCGTCCTTCGTGACATCCGCCATGACCCCGCTGGCTAGAATTCGCAAACGACTGGCAAGGATCaa                                          >  1:238893/1‑150 (MQ=255)
                                                                                                              gTCAGGTTTGCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGCA‑CCCAAAATGTCACTGCCCGGTGACAATCCCGTCGTCCTTCGTGACATCCGCCATGACCCCGCTGGCTAGAATTCGCAAACGACTGGCAAg                                                >  1:2278374/1‑143 (MQ=255)
                                                                                                              gTCAGGTTTGCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGCA‑CCCAAAATGTCACTGCCCGGTGACAATCCCGTCGTCCTTCGTGACATCCGCCATGACCCCGCTGGCTAGAATTCGCAAACGACTGGCAAg                                                <  2:2278374/143‑1 (MQ=255)
                                                                                                                  ggTTTGCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGCA‑CCCAAAATGTCACTGCCCGGTGACAATCCCGTCGTCCTTCGTGACATCCGCCATGACCCCGCTGGCTAGAATTCGCAAACGACTGGCAAGGATCAAGCTgg                                     <  2:627478/150‑1 (MQ=255)
                                                                                                                   gTTTGCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGc                                                                                                                                                  <  2:2138560/41‑1 (MQ=255)
                                                                                                                   gTTTGCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGc                                                                                                                                                  >  1:2138560/1‑41 (MQ=255)
                                                                                                                            gtaggagcgggttcacccgcgaagaGGCCCGCACAGGCA‑CCCAAAATGTCACTGCCCGGTGACAATCCCGTCGTCCTTCGTGACATCCGCCATGACCCCGCTGGCTAGAATTCGCAAACGACTGGCAAGGATCAAGCTGGCCCATGAccc                           >  1:107660‑M2/26‑150 (MQ=255)
                                                                                                                             taggagcgggttcacccgcgaagaGGCCCGCACAGGCA‑CCCAAAATGTCACTGCCCGGTGACAATCCCGTCGTCCTTCGTGACATCCGCCATGACCCCGCTGGCTAGAATTCGCAAACGACTGGCAAGGATCAAGCTGGCCCATGAcccc                          >  2:1293400‑M2/25‑150 (MQ=255)
                                                                                                                              aggagcgggttcacccgcgaagaGGCCCGCACAGGCA‑CCCAAAATGTCACTGCCCGGTGACAATCCCGTCGTCCTTCGTGACATCCGCCATGACCCCGCTGGCTAGAAt                                                                  >  2:1939616‑M2/24‑109 (MQ=255)
                                                                                                                              aggagcgggttcacccgcgaagaGGCCCGCACAGGCA‑CCCAAAATGTCACTGCCCGGTGACAATCCCGTCGTCCTTCGTGACATCCGCCATGACCCCGCTGGCTAGAAt                                                                  <  1:1939616‑M2/86‑1 (MQ=255)
                                                                                                                               ttcgcgggtgaacccgcgaagaGGCCCGCACAGGCA‑CCCAAAATGTCACTGCCCGGTGACAATCCCGTCGTCCTTCGTGACATCCGCCATGACCCCGCTGGCTAGAATTCGCAAACGACTGGCAAGGATCAAGCTGGCCCATGAcacccc                        >  1:828677‑M2/23‑150 (MQ=255)
                                                                                                                                    ggcttcccctgcgaagaGGCCCGCACAGGCA‑CCCAAAATGTCACTGCCCGGTGACAATCCCGTCGTCCTTCGTGACATCCGCCATGACCCCGCTGGCTAGAATTCGCAAACGACTGGCAAGGATCAAGCTGGCCCATGACCCCCCTCAAc                   <  2:1942493‑M2/133‑1 (MQ=255)
                                                                                                                                     ggttcacccgcgaagaGGCCCGCACAGGCA‑CCCAAAATGTCACTGCCCGGTGAc                                                                                                                  <  1:2094891‑M2/38‑1 (MQ=255)
                                                                                                                                     ggttcacccgcgaagaGGCCCGCACAGGCA‑CCCAAAATGTCACTGCCCGGTGAc                                                                                                                  >  2:2094891‑M2/17‑54 (MQ=255)
                                                                                                                                     ggttcacccgcgaagaGGCCCGCACAGGCA‑CCCAAAATGTCACTGCCCGGTGACAATCCCGTCGTCCTTCGTGACATCCGCCATGACCCCGCTGGCTAGAATTCGCAAACGACTGGCAAGGATCAAGc                                        >  2:1357961‑M2/17‑128 (MQ=255)
                                                                                                                                     ggttcacccgcgaagaGGCCCGCACAGGCA‑CCCAAAATGTCACTGCCCGGTGACAATCCCGTCGTCCTTCGTGACATCCGCCATGACCCCGCTGGCTAGAATTCGCAAACGACTGGCAAGGATCAAGc                                        <  1:1357961‑M2/112‑1 (MQ=255)
                                                                                                                                     ggtgaacccgcgaagaGGCCCGCACAGGCA‑CCCAAAATGTCACTGCCCGGTGACAATCCCGTCGTCCTTCGTGACATCCGCCATGACCCCGCTGGCTAGAATTCGCAAACGACTGGCAAGGATCAAGCTGGCCCATGACCCCCCTCAAcc                  >  2:1906968‑M2/17‑150 (MQ=255)
                                                                                                                                      gttcacccgcgaagaGGCCCGCACAGGCA‑CCCAAAATGTCACTGCCCGGTGACAATCCCGTCGTCCTTCGTGACATCCGCCATGACCCCGCTGGCTAGAATTc                                                                <  2:1123846‑M2/88‑1 (MQ=255)
                                                                                                                                      gttcacccgcgaagaGGCCCGCACAGGCA‑CCCAAAATGTCACTGCCCGGTGACAATCCCGTCGTCCTTCGTGACATCCGCCATGACCCCGCTGGCTAGAATTc                                                                >  1:1123846‑M2/16‑103 (MQ=255)
                                                                                                                                      gttcacccgcgaagaGGCCCGCACAGGCA‑CCCAAAATGTCACTGCCCGGTGACAATCCCGTCGTCCTTCGTGACATCCGCCATGACCCCGCTGGCTAGAATTCGCAAACGACTGGCAAGGATCAAGCTGGCCCATGACCCCCCTCAACCt                 <  1:599082‑M2/135‑1 (MQ=255)
                                                                                                                                          ccccgcgaagaGGCCCGCACAGGCA‑CCCAAAATGTCACTGCCCGGTGACAATCCCGTCGTCCTTCGTGACATCCGCCATGACCCCGCTGGCTAGAATTCGCAAACGACTGGCAAGGATCAAGCTGGCCCATGACCCCCCTCAACCTGTAt             <  2:1038760‑M2/139‑1 (MQ=255)
                                                                                                                                          ccccgcgaagaGGCCCGCACAGGCA‑CCCAAAATGGCACTGCCCGGTGACAATCCCGTCGTCCTTCGTGACATCCGCCACGACCCGGCTGGCTAGAACTCGCACACGACTGGCAAGGTTCAAGCTGGCCCAGGACCCCCCGCAGCCTGTAt             <  2:1837591‑M2/139‑1 (MQ=255)
                                                                                                                                          acccgcgaagaGGCCCGCACAGGCC‑CCCAAAATGTCACTGCCCGGTGACAATCCCGTCGTCCTTCGTGACATCCGCCATGACCCCGCTGGCTAGAATTCGCAAACGACTGGCAAGGATCAAGCTGGCCCATGACCCCCCTCAACCTGTAt             >  1:572510‑M2/12‑150 (MQ=255)
                                                                                                                                          acccgcgaagaGGCCCGCACAGGCA‑CCCAAAATGTCACTGCCCGGTGACAATCCCGTCGTCCTTCGTGACATCCGCCATGACCCCGCTGGCTAGAATTCGCAAACGACTGGCAAGGATCAAGCTGGCCCATGACCCCCCTCAACCTGTAt             <  1:1906968‑M2/139‑1 (MQ=255)
                                                                                                                                           cccgcgaagaGGCCCGCACAGGCA‑CCCAAAATGTCACTGCCCGGTGACAATCCCGTCGTCCTTCGTGACATCCGCCATGACCCCGCTGGCTa                                                                      >  1:1038019‑M2/11‑92 (MQ=255)
                                                                                                                                           cccgcgaagaGGCCCGCACAGGCA‑CCCAAAATGTCACTGCCCGGTGACAATCCCGTCGTCCTTCGTGACATCCGCCATGACCCCGCTGGCTa                                                                      <  2:1038019‑M2/82‑1 (MQ=255)
                                                                                                                                            ccgcgaagaGGCCCGCACAGGCA‑CCCAAAATGTCa                                                                                                                              <  2:624859‑M2/26‑1 (MQ=255)
                                                                                                                                            ccgcgaagaGGCCCGCACAGGCA‑CCCAAAATGTCa                                                                                                                              >  1:624859‑M2/10‑35 (MQ=255)
                                                                                                                                            ccgcgaagaGGCCCGCACAGGCA‑CCCAAAATGTCCCTGCCCGGTGACAATCCCGTCGTCCTTAGTGACATCGGACATGACGCCAACGACTAGAATCCTGAAACGACTGGCAAGGATCACGCTGGCCCATGACCACCCTCAACCTGtatct           >  1:1149141‑M2/10‑148 (MQ=255)
                                                                                                                                            ccgcgaagaGGCCCGCACAGGCA‑CCCAAAATGTCACTGCCCGGTGACAATCCCGTCGTCCTTCGTGACATCCGCCATGACCCCGCTGGCTAGAATTCGCAAACGTCTGGCAAGGATCAAGCTGGCCCa                                 <  1:1168377‑M2/119‑1 (MQ=255)
                                                                                                                                            ccgcgaagaGGCCCGCACAGGCA‑CCCAAAATGTCACTGCCCGGTGACAATCCCGTCGTCCTTCGTGACATCCGCCATGACCCCGCTGGCTAGAATTCGCAAACGACTGGCAAGGATCAAGCTGGCCCa                                 >  2:1168377‑M2/10‑128 (MQ=255)
                                                                                                                                            ccgcgaagaGGCCCGCACAGGCA‑CCCAAAATGTCACTGCCCGGTGACAATCCCGTCGTCCTTCGTGACATCCGCCATGACCCCGCTGGCTAGAATTCGCAAACGACTGGCAAGGATCAAGCTGGCCCATGAcccc                          >  2:984759‑M2/10‑135 (MQ=255)
                                                                                                                                            ccgcgaagaGGCCCGCACAGGCA‑CCCAAAATGTCACTGCCCGGTGACAATCCCGTCGTCCTTCGTGACATCCGCCATGACCCCGCTGGCTAGAATTCGCAAACGACTGGCAAGGATCAAGCTGGCCCATGAcccc                          <  1:984759‑M2/126‑1 (MQ=255)
                                                                                                                                            ccgcgaagaGGCCCGCACAGGCA‑CCCAAAATGTCACTGCCCGGTGACAATCCCGTCGTCCTTCGTGACATCCGCCATGACCCCGCTGGCTAGAATTCGCAAACGACTGGCAAGGATCAAGCTGGCCCATGACCCCCCTCAACCTGTAtgt           >  2:739701‑M2/10‑150 (MQ=255)
                                                                                                                                            ccGCGAAGAGGCCCCCACAGGCA‑ACCAAAATCACACAGCCCGGCGACACTCCCGTCGTCCTTCGTCACATCCGCCATGTCCCCGCTGGCTAGAATTCGCAAACGACTGGTAAGGATCAAGCGGGCCCATGACCCCCCTCAACCTGTAtgt           <  2:1149141/150‑1 (MQ=255)
                                                                                                                                                 aagaGGCCCGCACAGGCA‑CCCAAAATGTCACTGCCCGGTGACAATCCCGTCGTCCTTCGTGACATCCGCCATGACCCCGCTGGCTAGAATTCGCAAACGACTGGCAAGGATCAAGCTGGCCCATGACCCCCCTCAACCTGTATGTGAACa      <  1:1300296‑M2/146‑1 (MQ=255)
                                                                                                                                                 aagaGGCCCGCACAGGCA‑CCCAAAATGTCACTGCCCGGTGACAATCCCGTCGTCCTTCGTGACATCCGCCATGACCCCGCTGGCTAGAATTCGCAAACGACTGGCAAGGATCAAGCTGGCCCATGACCCCCCTCAACCTGTATGTGAACa      <  1:1293400‑M2/146‑1 (MQ=255)
                                                                                                                                                     ggCCCGCACAGGCA‑CCCAAAATGTCACTGCCCGGTGACAATCCCGTCGTCCTTCGTGACATCCGCCATGACCCCGCTGGCTAGAATTCGCAAACGACTGGCAAGGATCAAGCTGGCCCATGACCCCCCTCAACCTGTATGTGAACAGTTg  <  1:690190/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                      
GCGGGAGGGCGGGCTGCGGGTGACCCTGTATCTGCCGCGGGGTATGGATTGAGTTTTTGGGGTGCCTGTGCGGGCTTCTTCGCGGGTGAACCCGCTCCTACAACGACCGAGTCAGGTTTGCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGCA‑CCCAAAATGTCACTGCCCGGTGACAATCCCGTCGTCCTTCGTGACATCCGCCATGACCCCGCTGGCTAGAATTCGCAAACGACTGGCAAGGATCAAGCTGGCCCATGACCCCCCTCAACCTGTATGTGAACAGTTG  >  NC_002947/1156252‑1156550

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.