New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1570443 =74 (0.840)12 (0.170) 9/194 NT 18.6% intergenic (+9/‑179) pcaF‑I/pcaT beta‑ketoadipyl‑CoA thiolase/alpha‑ketoglutarate permease
?NC_002947 1570521 = 47 (0.670)intergenic (+87/‑101) pcaF‑I/pcaT beta‑ketoadipyl‑CoA thiolase/alpha‑ketoglutarate permease

Only 100 of 113 total aligned reads displayed.

GCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTAAACCCGTCATGACCTCAACCTATTACACCGGCGAAGAACGCAGCAAGCGC  >  NC_002947/1570373‑1570663
                                                                                                                                                    |                                                                                                                                              
gCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGCATCCACGCAATCAACAGTGGGAGCGGGCTTCCCCGCGAAGAGGCctc                                                                                                                                               >  2:2299362/1‑150 (MQ=255)
        aCCATGTGTGTGGGTGTCGGCCAATCTCTGCCGTTGGCCATCGCGTGGGTTTGACCTATACCGGCCTCTTCCCCGGGAAGCCCGCTCCCACCGGCACCAGCGCAATCTCCTGTTGGAGCCGGCTTCCCCGCGAAGAGGCCTCTCCTGTga                                                                                                                                       <  2:943449/150‑1 (MQ=255)
           aTGTGTGTGGGTGTCGGCC‑AGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACa                                                                                                                                   >  2:1516921/1‑150 (MQ=255)
            tgtgtgtgGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACa                                                                                                                                   <  2:285863/150‑1 (MQ=255)
                               aGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGccc                                                                                                                <  1:1711952/150‑1 (MQ=255)
                                ggTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCg                                                                                                               >  1:2088328/1‑150 (MQ=255)
                                   cTGGCGTTGGCCATCTAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATa                                                                                                            <  1:1805251/150‑1 (MQ=255)
                                      gCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCg                                                                                                         <  1:2041291/150‑1 (MQ=255)
                                           ggCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCGTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACg                                                                                                    >  1:1899384/1‑150 (MQ=255)
                                               aTCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAgtg                                                                                                >  2:1936547/1‑150 (MQ=255)
                                                  gAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAgtgtgt                                                                                             <  1:1475620/150‑1 (MQ=255)
                                                    acGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTa                                                                                           >  2:1424174/2‑150 (MQ=255)
                                                        gTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGc                                                                                                                      >  2:1759074/1‑119 (MQ=255)
                                                        gTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGc                                                                                                                      <  1:1759074/119‑1 (MQ=255)
                                                        gTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAg                                                                                       >  1:1221924/1‑150 (MQ=255)
                                                           tGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTa                                                                                    <  1:1187472/150‑1 (MQ=255)
                                                           tGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTa                                                                                    >  2:1428424/1‑150 (MQ=255)
                                                               cTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAg                                                                                                                   >  1:2165283/1‑115 (MQ=255)
                                                               cTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAg                                                                                                                   <  2:2165283/115‑1 (MQ=255)
                                                                  tACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAg                                                                             <  2:2088328/150‑1 (MQ=255)
                                                                    ccGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGaa                                                                           <  1:1516921/150‑1 (MQ=255)
                                                                        CCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGa                                                                                                   <  1:248334‑M1/122‑1 (MQ=255)
                                                                         CTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCATTTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTAATAGGGATGTCTAGAACTAcc                                                                      <  1:1355759‑M1/150‑1 (MQ=255)
                                                                          TCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGccc                                                                                                                <  1:2367717‑M1/107‑1 (MQ=255)
                                                                          TCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGccc                                                                                                                >  2:2367717‑M1/1‑107 (MQ=255)
                                                                          TCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCt                                                                     <  2:869348‑M1/150‑1 (MQ=255)
                                                                          TCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCt                                                                     <  2:1825005‑M1/150‑1 (MQ=255)
                                                                            TTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAgtgt                                                                                               >  2:1037826‑M1/1‑122 (MQ=255)
                                                                            TTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAgtgt                                                                                               <  1:1037826‑M1/122‑1 (MQ=255)
                                                                            TTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAg                                                                   <  1:1997027‑M1/150‑1 (MQ=255)
                                                                                      AGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGATCCTCCAg                                                         >  2:1207724‑M1/1‑150 (MQ=255)
                                                                                       gcccgctcccacaggtgattgcgtggatccctgttggagcgggcttccccgcgaagaggccTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAgg                                                        >  2:1714084‑M2/62‑150 (MQ=255)
                                                                                       GCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAgg                                                        <  1:778837‑M1/150‑1 (MQ=255)
                                                                                        CCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGa                                                       <  1:1221500‑M1/150‑1 (MQ=255)
                                                                                        CCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGCGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACt                                                                         <  2:98297‑M1/132‑1 (MQ=255)
                                                                                        CCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGCGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACt                                                                         >  1:98297‑M1/1‑132 (MQ=255)
                                                                                         CCGCTCCAACAGGGGTCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCCAGAACTACCTAGGACCCTCCAGGAg                                                      <  1:1489832‑M1/150‑1 (MQ=255)
                                                                                         CCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAgtgtg                                                                                              >  1:199221‑M1/1‑110 (MQ=255)
                                                                                         CCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAgtgtg                                                                                              <  2:199221‑M1/110‑1 (MQ=255)
                                                                                         CCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTAcc                                                                      >  1:1897882‑M1/1‑134 (MQ=255)
                                                                                          cgctcccacaggtgattgcgtggatccctgttggagcgggcttccccgcgaagaggccTCTCCTGTGAGACATAAGGCCCAtt                                                                                                                        >  2:1073509‑M2/59‑83 (MQ=255)
                                                                                          cgctcccacaggtgattgcgtggatccctgttggagcgggcttccccgcgaagaggccTCTCCTGTGAGACATAAGGCCCAtt                                                                                                                        <  1:1073509‑M2/25‑1 (MQ=255)
                                                                                             TCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACGTAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTaaa                                                  >  2:1221500‑M1/1‑150 (MQ=255)
                                                                                             TCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTaaa                                                  <  2:1693757‑M1/150‑1 (MQ=255)
                                                                                               ccacaggtgattgcgtggatccctgttggagcgggcttccccgcgaagaggccTCTCCTGTGAGACATAAGGCCCAt                                                                                                                         <  2:175866‑M2/24‑1 (MQ=255)
                                                                                               ccacaggtgattgcgtggatccctgttggagcgggcttccccgcgaagaggccTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGaa                                                                                                      >  1:2249578‑M2/54‑96 (MQ=255)
                                                                                               ccacaggtgattgcgtggatccctgttggagcgggcttccccgcgaagaggccTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGaa                                                                                                      <  2:2249578‑M2/43‑1 (MQ=255)
                                                                                                cacaggtgattgcgtggatccctgttggagcgggcttccccgcgaagaggccTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTAAAccc                                               >  2:2113508‑M2/53‑150 (MQ=255)
                                                                                                aaCAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTAAAccc                                               >  2:321915/1‑150 (MQ=255)
                                                                                                 acaggtgattgcgtggatccctgttggagcgggcttccccgcgaagaggccTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTAAACCCg                                              >  2:379488‑M2/52‑150 (MQ=255)
                                                                                                 acaggtgattgcgtggatccctgttggagcgggcttccccgcgaagaggccTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTAAACCCg                                              >  1:3545‑M2/52‑150 (MQ=255)
                                                                                                 acaggtgattgcgtggatccctgttggagcgggcttccccgcgaagaggccTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTAAACCCg                                              >  2:1314585‑M2/52‑150 (MQ=255)
                                                                                                 aCAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTc                                                            <  1:1647659/136‑1 (MQ=255)
                                                                                                 aCAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTaa                                                   >  1:1983414/1‑145 (MQ=255)
                                                                                                 aCAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTaa                                                   <  2:1983414/145‑1 (MQ=255)
                                                                                                 aCAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTAAACCCg                                              >  2:657375/1‑150 (MQ=255)
                                                                                                     ggATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTAt                                                                                   >  1:987377/1‑109 (MQ=255)
                                                                                                     ggATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTAt                                                                                   <  2:987377/109‑1 (MQ=255)
                                                                                                     ggATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTAAACCCGTCAt                                          <  1:2184862/150‑1 (MQ=255)
                                                                                                      gATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCt                                                             >  1:427655/1‑130 (MQ=255)
                                                                                                      gATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCt                                                             <  2:427655/130‑1 (MQ=255)
                                                                                                       aTCCACGCAATCACCTGTGGGAGCGGGCATCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTACGACCCTCCCGGAGTAAACCCGTCATGa                                        <  1:1771305/150‑1 (MQ=255)
                                                                                                           aCGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAgtgtg                                                                                              >  2:590116/1‑92 (MQ=255)
                                                                                                           aCGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAgtgtg                                                                                              <  1:590116/92‑1 (MQ=255)
                                                                                                           aCGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGaa                                                                           <  2:413167/111‑1 (MQ=255)
                                                                                                           aCGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGaa                                                                           >  1:413167/1‑111 (MQ=255)
                                                                                                           aCGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTAAACCCGTCATGACCTc                                    >  1:658853/1‑150 (MQ=255)
                                                                                                             gCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATa                                                                                                            <  1:1947974/76‑1 (MQ=255)
                                                                                                             gCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATa                                                                                                            >  2:1947974/1‑76 (MQ=255)
                                                                                                              tggatccctgttggagcgggcttccccgcgaagaggccTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTAAACCCGTCATGACCTCAAc                                 <  1:1314585‑M2/112‑1 (MQ=255)
                                                                                                              gaaTCACCTTTGGGCGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATGAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTAAACCCGTCATGACCTCAAc                                 <  1:2299362/149‑1 (MQ=255)
                                                                                                                 tCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCCAGAACTACCTAGGACCCTCCAGGAGTAAACCCGTCATGACCTCAACCTa                              <  2:1489832/150‑1 (MQ=255)
                                                                                                                   acgtgtgGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTAAACCCGTCATGACCTCAACCTAtt                            <  1:503365/147‑1 (MQ=255)
                                                                                                                   aCCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAg                                                      <  1:1476037/124‑1 (MQ=255)
                                                                                                                   aCCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAg                                                      >  2:1476037/1‑124 (MQ=255)
                                                                                                                      tgtgGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAg                                                         <  2:393791/118‑1 (MQ=255)
                                                                                                                      tgtgGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTAAACCCGTCATGACCTCAACCTATTaca                         <  1:1428424/150‑1 (MQ=255)
                                                                                                                       gtgGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTAAACCCGTCATGACCTCAACCTATTacac                        >  2:2292255/1‑150 (MQ=255)
                                                                                                                        tgGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTAAACCCGTCATGACCTCAACCTATTACAcc                       >  2:1380153/1‑150 (MQ=255)
                                                                                                                        tgGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTAAACCCGTCATGACCTCAACCTATTACAcc                       <  1:1825005/150‑1 (MQ=255)
                                                                                                                           gagcgggcttccccgcgaagaggccTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTAAACCCGTCATGACCTCAACCTATTACACCGGc                    >  2:1818579‑M2/26‑150 (MQ=255)
                                                                                                                            agcgggcttccccgcgaagaggccTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTa                                                                              >  1:178648‑M2/25‑91 (MQ=255)
                                                                                                                            agcgggcttccccgcgaagaggccTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTa                                                                              <  2:178648‑M2/67‑1 (MQ=255)
                                                                                                                            agcgggcttccccgcgaagaggccTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTAAACCCGTCATGACCTCAACCTATTACACCGGCg                   >  2:1491138‑M2/25‑150 (MQ=255)
                                                                                                                             gcgggcttccccgcgaagaggccTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTAAACCCGTCATGACCTCAAACTCTTACACCGGCga                  >  2:440759‑M2/24‑150 (MQ=255)
                                                                                                                               ctatcgccccGCGAACAGGCCTCTACTTCACGACATCCGACCCATTCGCCCCCCGCTAGCGAAACGAGTGTCTTACTATTTATGTCTAGAACTACCTAGGACCCTCCAGGAGTAAACCCGTCATGACCTCAACCTATTACACCGGCgaag                <  2:1706076/144‑1 (MQ=255)
                                                                                                                                ggcttccccgcgaagaggccTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGa                                                       <  1:1284909‑M2/90‑1 (MQ=255)
                                                                                                                                   ttccccgcgaagaggccTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTACACCAGTCATGACCTCAACCTCTTCcaccggcgtgtaacg            <  2:1899384‑M2/133‑8 (MQ=255)
                                                                                                                                   ttccccgcgaagaggccTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTAAACCCGTCATGACCTCAACCTATTacac                        <  2:226768‑M2/121‑1 (MQ=255)
                                                                                                                                   ttccccgcgaagaggccTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTAAACCCGTCATGACCTCAACCTATTacac                        >  1:226768‑M2/18‑138 (MQ=255)
                                                                                                                                   ttccccgcgaagaggccTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTAAACCCGTCATGACCTCAACCTATTACACCGGCGAAGAACg            <  2:1997027‑M2/133‑1 (MQ=255)
                                                                                                                                    tccccgcgaagaggccTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTAAACCCGTCATGACCTCAACCTATTACACCGGCGAAGAACgc           <  2:1221924‑M2/134‑1 (MQ=255)
                                                                                                                                     ccccgcgaagaggccTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTAAACCCGTCATGACCTCAACCTATTACACCGGCGAAGAACgca          <  2:658853‑M2/135‑1 (MQ=255)
                                                                                                                                      cccgcgaagaggccTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTAAAATTGGGATGACGTCAAGCTATTACAccggcgaagaagatcg         >  1:1706076‑M2/15‑145 (MQ=255)
                                                                                                                                       ccgcgaagaggccTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGAccc                                                              >  2:1974433‑M2/14‑96 (MQ=255)
                                                                                                                                       ccgcgaagaggccTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGAccc                                                              <  1:1974433‑M2/83‑1 (MQ=255)
                                                                                                                                       ccgcgaagaggccTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTAAACCCGTCATGACCTCAACCTATTACACCGGCGAAGAACgcagc        <  1:1818579‑M2/137‑1 (MQ=255)
                                                                                                                                       ccgcgaagaggccTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTAAACCCGTCATGACCTCAACCTATTACACCGGCGAAGAACgcagc        >  1:438698‑M2/14‑150 (MQ=255)
                                                                                                                                             agaggccTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTAAACCCGTCATGACCTCAACCTATTACACCGGCGAAGAACGCAGCAAgcgc  <  2:3545‑M2/143‑1 (MQ=255)
                                                                                                                                             agagGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTATGTATGTCTAGCACTACCTAGGTCACTCTCTCACAAAGCCCAGTTTCATCGCAACCTATTACACCGGCGAAGAACGCAGCAAgcgc  <  1:657375/150‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                              
GCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTAAACCCGTCATGACCTCAACCTATTACACCGGCGAAGAACGCAGCAAGCGC  >  NC_002947/1570373‑1570663

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.