New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 3319164 =117 (1.320)8 (0.100) 8/224 NT 7.4% intergenic (‑85/+107) treSA/PP_2919 trehalose synthase A/LysR family transcriptional regulator
?NC_002947 3319249 = 93 (1.150)intergenic (‑170/+22) treSA/PP_2919 trehalose synthase A/LysR family transcriptional regulator

Only 100 of 113 total aligned reads displayed.

GCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCGGGCTGAATGCCCGTTCCCGGTGCCAGGCCAACCCCACGCTCATCGGCGT  >  NC_002947/3319102‑3319393
                                                                                                                                                   |                                                                                                                                                
gCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGGGGGCTTGCACGCTCCCACCGGCGGACATACAGCTTCCGCTTTGCGCTGCACCCGTCGGAGCCGGCGCCGCCGCAAACAGGc                                                                                                                                                >  2:1101149/1‑150 (MQ=255)
gCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGc                                                                                                                                                >  1:2136235/1‑150 (MQ=255)
 cACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTTCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGCGAGCGGGCGCGCCGGCGAAGAGGcc                                                                                                                                               >  1:487779/1‑150 (MQ=255)
  aCCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGATTGGCCGCTCCCACACGTGGGCAGACCCCTGAATGGTTTCTCTGCACCTGTGGGAGAGGGGGCGCCCGCGAAGAGGCCg                                                                                                                                              >  1:1144130/1‑150 (MQ=255)
      gCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGcc                                                                                                                                          <  2:783240/150‑1 (MQ=255)
         cAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGc                                                                                                                                       <  2:1024377/150‑1 (MQ=255)
            gTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCaaa                                                                                                                                    <  1:228380/150‑1 (MQ=255)
             ttATGACGGGGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTTTCCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAg                                                                                                                                   <  2:1761209/150‑1 (MQ=255)
             ttATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAg                                                                                                                                   <  2:1709525/150‑1 (MQ=255)
             ttATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAg                                                                                                                                   >  2:1684973/1‑150 (MQ=255)
             ttATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGGGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCGCAGGCGGACATACCGCTGAAGATTTGGGCTGCAGCTGTGGGAGCGGGGGCGCCCGGGAAGAGGCCGGGCCTGCagag                                                                                                                                   >  1:953085/1‑150 (MQ=255)
                tGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCa                                                                                                                                >  2:971270/1‑150 (MQ=255)
                tGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCa                                                                                                                                <  2:2136235/150‑1 (MQ=255)
                tGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCa                                                                                                                                >  2:2024984/1‑150 (MQ=255)
                tGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCa                                                                                                                                <  2:1948181/150‑1 (MQ=255)
                 gACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAg                                                                                                                               <  2:1246952/150‑1 (MQ=255)
                 gACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAg                                                                                                                               <  2:453334/150‑1 (MQ=255)
                  ccGGCGCTGCGGCCTGAACGGTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCGTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACATGTGGGAGAGGGCGCGCCCGTGAAGAGGGCGGGCCTTCAATGGCAgg                                                                                                                              <  2:1351885/149‑1 (MQ=255)
                  aCGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTTGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAgg                                                                                                                              <  1:560827/150‑1 (MQ=255)
                         tGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCgg                                                                                                                                             >  2:2306507/1‑128 (MQ=255)
                         tGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCgg                                                                                                                                             <  1:2306507/128‑1 (MQ=255)
                          gCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAgcgc                                                                                                                      >  2:1410535/1‑150 (MQ=255)
                              ccTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCggg                                                                                                                  <  2:1660169/150‑1 (MQ=255)
                              ccTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCCCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCggg                                                                                                                  <  2:47587/150‑1 (MQ=255)
                               cTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCgg                                                                                                                                             <  1:435754/122‑1 (MQ=255)
                               cTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCgg                                                                                                                                             >  2:435754/1‑122 (MQ=255)
                               cTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCt                                                                                                                                         >  1:1317805/1‑126 (MQ=255)
                               cTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCt                                                                                                                                         <  2:1317805/126‑1 (MQ=255)
                               cTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGc                                                                                                                 >  2:1466927/1‑150 (MQ=255)
                               cTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGc                                                                                                                 <  1:971270/150‑1 (MQ=255)
                                 gAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCg                                                                                                               >  1:994974/1‑150 (MQ=255)
                                 gAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCg                                                                                                               >  1:1645840/1‑150 (MQ=255)
                                  aaCGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCgg                                                                                                                                             >  2:1049162/1‑119 (MQ=255)
                                  aaCGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCgg                                                                                                                                             <  1:1049162/119‑1 (MQ=255)
                                   aCGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGAc                                                                                                             <  1:1684973/150‑1 (MQ=255)
                                         ggCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCCCCCACAGGCGGACATACCGCCGAAGGATTTCGCTGCAGCAGTGGGAGCGGGCGCGCCCGGGAAGAGGCCCGGCCTGTTACGGCAAGATCAGCGCCGGGCCGACAActgg                                                                                                       >  1:632731/1‑149 (MQ=255)
                                         ggCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCAACTCCGACAGGCGGACATGCCGCTGAAGATTTCCGCTGCACCAGCGGAACCTGGCGCGCCCGCGAAGAGGCCCGGCCTGCAAAGGCAAGATCAGCGCCCGGGCGACAAgtgc                                                                                                       >  1:33094/1‑150 (MQ=255)
                                          tctaaaGATGGTTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAActgct                                                                                                      <  2:1339323/146‑1 (MQ=255)
                                          gCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAActgct                                                                                                      >  1:1458450/1‑150 (MQ=255)
                                          gCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAActgct                                                                                                      >  1:1722622/1‑150 (MQ=255)
                                            tCAAGAGGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGTTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCGGCGAAGAGTCCGGGCCTGCAAAGGCTGGATCAGCGCCGGGCGTACAACtgctgc                                                                                                    <  2:542005/150‑1 (MQ=255)
                                                gATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCa                                                                                                                                <  2:1546934/118‑1 (MQ=255)
                                                gATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCa                                                                                                                                >  1:1546934/1‑118 (MQ=255)
                                                   gggTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCa                                                                                             <  1:1466927/150‑1 (MQ=255)
                                                   gggTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGAGTTCCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGACGCCGGGCCCGCAAAGGCAGGATCACCGCCGGGCCGCCAACTCCTGCGGTACCa                                                                                             >  2:1196192/1‑150 (MQ=38)
                                                       gtgggTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGGACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGGCAGaat                                                                                         <  2:151961/147‑2 (MQ=255)
                                                       gtTGGTTTCTTCGCGGGCTTGCCCGCTCCTACAGTCTGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGaaa                                                                                         <  2:632731/150‑1 (MQ=255)
                                                        ttGGTTTCTTCGCGGGCTTGCCCGGGCCCACAGGGGGACATACCGCTGAAGATTTGCGCTGCCCCTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGGTCCGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAAc                                                                                        >  1:1004437/1‑150 (MQ=255)
                                                        ttGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATCCCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAAc                                                                                        <  2:1645840/150‑1 (MQ=255)
                                                        ttGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAAc                                                                                        <  2:1722622/150‑1 (MQ=255)
                                                           gTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCCGCGCCGGGCCGACAACTGCTGAGGTGCCAGAAACGca                                                                                     >  1:747258/1‑150 (MQ=255)
                                                           gTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGca                                                                                     <  1:2056633/150‑1 (MQ=255)
                                                            tttCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGcat                                                                                    <  2:483211/150‑1 (MQ=255)
                                                              tcttcgcgggcgcgcccgctcccacaggtgcagcgcaaatcttcagcggtatgtccgcctgtgggagcgggcaagcccgcgaagaGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGt                                                                                                 <  2:1443296‑M2/50‑1 (MQ=255)
                                                              tcttcgcgggcgcgcccgctcccacaggtgcagcgcaaatcttcagcggtatgtccgcctgtgggagcgggcaagcccgcgaagaGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGt                                                                                                 >  1:1443296‑M2/86‑135 (MQ=255)
                                                               CTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGcatcat                                                                                 >  1:1410535‑M1/1‑150 (MQ=255)
                                                                       gCTTGCGCGCTCCCACAGGCGCACATCCCGCTGAAGATTTGCGACGAAACTGTCGGACCGGGCGCGCTCGCTTACAGCCCGGGCCTGCAAAGGCAGGATAAGCGCCGGGCCGTCAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTaa                                                                         <  2:2077481/150‑1 (MQ=255)
                                                                       GCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTaa                                                                         <  1:521874‑M1/150‑1 (MQ=255)
                                                                         ttGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAg                                                                                                                                   >  2:897057/1‑90 (MQ=255)
                                                                         ttGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAg                                                                                                                                   <  1:897057/90‑1 (MQ=255)
                                                                         aagCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGc                                                                                                                                           >  2:914113/3‑82 (MQ=255)
                                                                             ccGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTgcgc                                                                   >  1:153389/1‑150 (MQ=255)
                                                                              cGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCa                                                                  >  1:1460279/1‑150 (MQ=255)
                                                                               gCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGc                                                                                                                 <  2:1644631/102‑1 (MQ=255)
                                                                               gCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGc                                                                                                                 >  1:1644631/1‑102 (MQ=255)
                                                                                cgcccACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCAcc                                                                >  1:2162658/3‑150 (MQ=255)
                                                                                   ccacaggtgcagcgcaaatcttcagcggtatgtccgcctgtgggagcgggcaagcccgcgaagaGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGcc                                                             >  1:617657‑M2/65‑150 (MQ=255)
                                                                                   ccACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGcc                                                             >  2:479908/1‑150 (MQ=255)
                                                                                     acaggtgcagcgcaaatcttcagcggtatgtccgcctgtgggagcgggcaagcccgcgaagaGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGcatca                                                                                  <  2:653091‑M2/65‑1 (MQ=255)
                                                                                     acaggtgcagcgcaaatcttcagcggtatgtccgcctgtgggagcgggcaagcccgcgaagaGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGcatca                                                                                  >  1:653091‑M2/63‑127 (MQ=255)
                                                                                     acaGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGcaca                                                           >  1:2042396/1‑147 (MQ=255)
                                                                                       aGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCa                                                         >  1:1174207/1‑150 (MQ=255)
                                                                                        ggCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCAt                                                        >  2:1284717/1‑150 (MQ=255)
                                                                                               aTACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCggg                                                 <  2:1460279/150‑1 (MQ=255)
                                                                                                tACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCGGGc                                                >  2:1327945/1‑150 (MQ=255)
                                                                                                gcaaatcttcagcggtatgtccgcctgtgggagcgggcaagcccgcgaagaGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCGGGc                                                <  2:617657‑M2/99‑1 (MQ=255)
                                                                                                        aaGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGt                                                                                                 >  1:2237506/1‑93 (MQ=255)
                                                                                                        aaGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGt                                                                                                 <  2:2237506/93‑1 (MQ=255)
                                                                                                        aaGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCGGGCTGAATGcc                                        >  2:1144866/1‑150 (MQ=255)
                                                                                                        aaGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGCACCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCGGGCTGAATGcc                                        >  1:24566/1‑150 (MQ=255)
                                                                                                        aaGATTTGCGCTGCACCTGAGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCGGCGCGGGGCCGAGAAGGGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCGGGCTGAATGcc                                        >  2:1280434/1‑150 (MQ=255)
                                                                                                              tGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTGATTGCGCACCGCCTGCATCGCCGGGCTGAATGCCCGTTcc                                  >  1:47124/1‑150 (MQ=255)
                                                                                                                 gcTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCGGGCTGAATGCCCGTTCCCgg                               >  2:1971364/1‑150 (MQ=255)
                                                                                                                  cTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCGGGCTGAATGCCCGTTCCCGGt                              <  1:1284717/150‑1 (MQ=255)
                                                                                                                  cTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCGGGCTGAATGCCCGTTCCCGGt                              <  1:1971364/150‑1 (MQ=255)
                                                                                                                  cTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCGGGCTGAATGCACGTTcaaggt                              <  2:2212654/150‑6 (MQ=255)
                                                                                                                   tccgcctgtgggagcgggcaagcccgcgaagaGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATgg                                                                               >  1:29188‑M2/33‑100 (MQ=255)
                                                                                                                       ccTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCGGGCTGAATGCCCGTTCCCGGTGCCAg                         >  1:2014915/1‑150 (MQ=255)
                                                                                                                        cTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCGGGCTGAATGCCCGTTCCCGGTGCCAgg                        >  1:1878475/1‑150 (MQ=255)
                                                                                                                        cTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCGGGCTGAATGCCCGTTCCCGGTGCCAgg                        >  1:164840/1‑150 (MQ=255)
                                                                                                                           tcttcgCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCGGGCTGAATGc                                         <  1:1526356/125‑1 (MQ=255)
                                                                                                                           tcttcgCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCGGGCTGAATGc                                         >  2:1526356/6‑130 (MQ=255)
                                                                                                                           tcttcgCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCGGGCTGAATGCCCGTTCCCGGTGCCAGGCCa                     >  1:2255191/6‑150 (MQ=255)
                                                                                                                             ttcgCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAActgc                                                                                                       >  2:389980/4‑66 (MQ=255)
                                                                                                                             ttcgCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAActgc                                                                                                       <  1:389980/63‑1 (MQ=255)
                                                                                                                             ggAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCGGGCTGAATGCCCGTTCCCGGTGCCAGGCCAAc                   >  1:1155763/1‑150 (MQ=255)
                                                                                                                                        gcccgcgaagaGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCGGGCGGAATGCCCGTTCCCGGTGCCAGGCCAACCCCACGCTCAt        >  1:300467‑M2/12‑150 (MQ=255)
                                                                                                                                              gaagaGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTGATTGCGCACCGCCTGCATCGCCGGGCTGAATGCCCGTTCCCGGTGCCAGGCCAACCCCACGCTCATCGGCGt  <  2:47124‑M2/145‑1 (MQ=255)
                                                                                                                                              gaagaGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCGGGCTGAATGCCCGTTCCCGGTGCCAGGCCAACCCCACGCTCATCGGCGt  >  1:1216876‑M2/6‑150 (MQ=255)
                                                                                                                                              gaagaGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCGGGCTGAATGCCCGTTCCCGGTGCCAGGCCAACCCCACGCTCATCGGCGt  <  2:1533389‑M2/145‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                
GCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATTGCGCACCGCCTGCATCGCCGGGCTGAATGCCCGTTCCCGGTGCCAGGCCAACCCCACGCTCATCGGCGT  >  NC_002947/3319102‑3319393

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.