New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 351158288 (0.990)7 (0.080) 6/232 NT 7.1% coding (207/4158 nt) PP_3108 rhs family protein
?NC_002947 = 3511612 100 (1.200)coding (237/4158 nt) PP_3108 rhs family protein

Only 100 of 112 total aligned reads displayed.

GGTGGCCACGGTGGCCATTGCCACGTTCACCTGCGGGTTCGGCGTGGCCTTGCTGGCCGGCCTCGCAGCCGGCATCGGGGGCAGCTTGCTGACCGCCGCCGGAGAGGCGATAGGCAGTATGTTCTCGTCCCCCTCAGGGACGATAACCACTGCCTCACCCAACGTGTTCATCAACAGCCGCAAGGCCGCCCGCGTCGAAAAAAGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGCAGATTGCCGAAGGCTCGACCAACGTCTTCATCAACAGCGTCGCCGCCGCGCG  >  NC_002947/3511465‑3511755
                                                                                                                                                   |                                                                                                                                               
ggtggCCACGGTGGCCATTGCCACGTTCACCTGCGGGTTCGGCGTGGCCTTGCTGGCCGGCCTCGCAGCCGGCATCGGGGGCAGCTTGCTGACCGCCGCCGGAGAGGCGATAGGCAGTATGTTCTCGTCCCCCTCAGGGACGATAACCac                                                                                                                                               >  1:1379902‑M2/1‑148 (MQ=255)
     ccACGGTGGCCATTGCCACGTTCACCTGCGGGTTCGGCGTGGCCTTGCTGGCCGGCCTCGCAGCCGGCATCGGGGGCAGCTTGCTGACCGCCGCCGGAGAGGCGATAGGCAGTATGTTCTCGTCCCCCTCAGGGACGATAACCactgcct                                                                                                                                          <  1:1674159‑M2/150‑8 (MQ=255)
             gCCATTGCCACGTTCACCTGCGGGTTCGGCGTGGCCTTGCTGGCCGGCCTCGCAGCCGGCATCGGGGGCAGCTTGCTGACCGCCGCCGGAGAGGCGATAGGCAGTATGTTCTCGTCCCCCTCAGGGACGATAACCACTGCCTCACCCAAc                                                                                                                                  >  2:1193345/1‑150 (MQ=255)
               cATTGCCACGTTCACCTGCGGGTTCGGCGTGGCCTTGCTGGCCGGCCTCGCAGCCGGCATCGGGGGCAGCTTGCTGACCGCCGCCGGAGAGGCGATAGGCAGTATGTTCTCGTCCCCCTCAGGGACGATAACCACTGCCTCACCCAACgt                                                                                                                                >  1:2002341/1‑150 (MQ=255)
               cATTGCCACGTTCACCTGCGGGTTCGGCGTGGCCTTGCTGGCCGGCCTCGCAGCCGGCATCGGGGGCAGCTTGCTGACCGCCGCCGGAGAGGCGATAGGCAGTATGTTCTCGTCCCCCTCAGGGACGATAACCACTGCCTCACCCAACgt                                                                                                                                >  2:725219/1‑150 (MQ=255)
                   gCCACGTTCACCTGCGGGTTCGGCGTGGCCTTGCTGGCCGGCCTCGCAGCCGGCATCGGGGGCAGCTTGCTGACCGCCGCCGGAGAGGCGATAGGCAGTATGTTCTCGTCCCCCTCAGGGACGATAACCACTGCCTCACCCAACGTGTtc                                                                                                                            <  2:1371753/150‑1 (MQ=255)
                   gCCACGTTCACCTGCGGGTTCGGCGTGGCCTTGCTGGCCGGCCTCGCAGCCGGCATCGGCGGCAGCTTGCTCCACGCTGCCTGGGATGCGATAGGCAGTATGTTCTCGTCCCCCTCAGGGACGATAACCACTGCCTCACCCAACGTGTtc                                                                                                                            >  1:2098746/1‑150 (MQ=255)
                   gCCACGTTCACCTGCGGGGTCGGCGTGGCCTTGCTGGCCGGCCTCGCAGCCGGCATCGGGGGCAGCTTGCTGACCGTCGCCGGAGAGGCGATAGGCATGATGTTCTCGTCCCCCTCAGGGACGATAACCACTGCCTCACCCAACGTGTtc                                                                                                                            <  2:337063/150‑1 (MQ=255)
                    ccACGTTCACCTGCGGGTTCGGCGTGGCCTTGCTGGCCGGCCTCGCAGCCGGCATCGGGGGCAGCTTGCTGACCGCCGCCGGAGAGGCGATAGGCAGTATGTTCTCGTCCCCCTCAGGGACGATAACCact                                                                                                                                              <  1:378712‑M2/131‑4 (MQ=255)
                    ccACGTTCACCTGCGGGTTCGGCGTGGCCTTGCTGGCCGGCCTCGCAGCCGGCATCGGGGGCAGCTTGCTGACCGCCGCCGGAGAGGCGATAGGCAGTATGTTCTCGTCCCCCTCAGGGACGATAACCact                                                                                                                                              >  2:378712‑M2/1‑128 (MQ=255)
                    ccACGTTCACCTGCGGGTTCGGCGTGGCCTTGCTGGCCGGCCTCGCAGCCGGCATCGGGGGCAGCTTGCTGACCGCCGCCGGAGAGGCGATAGGCAGTATGTTCTCGTCCCCCTCAGGGACGATAACCACTGCCTCACCCAACGTGTtca                                                                                                                           <  1:1175863/150‑1 (MQ=255)
                     cACGTTCACCTGCGGGTTCGGCGTGGCCTTGCTGGCCGGCCTCGCAGCCGGCATCGGGGGCAGCTTGCTCACCTCCGCCGGAGAGTCGATAGGCATTATTTTCTCGTCCCCCTCAGGGACGATAACCACTACCTCACAAAACGTGTtcat                                                                                                                          >  1:1976905/1‑150 (MQ=255)
                      aagTTCACCTGCGGGTTCGGCGTGGCCTTGCTGTCCGGCCTCGCAGCCGGCATCGGGGGCAGCTTGCTGACCGCCGCCGGAGAGGCGATAGGCAGTATGTTCTCGTCCCCCTCAGGGACGATAACCACTGCCTCACCCAACGTGTtcatc                                                                                                                         >  1:176641/3‑150 (MQ=255)
                       cGTTCACCTGCGGGTTCGGCGTGGCCTTGCTGGCCGGCCTCGCAGCCGGCATCGGGGGCAGCTTGCTGACCGCCGCCGGAGAGGCGATAGGCAGTATGTTCTCGTCCCCCTCAGGGACGATAACCACTGCCTCACCCAACGTGTtcatca                                                                                                                        >  2:1432991/1‑150 (MQ=255)
                         ttCACCTGCGGGTTCGGCGTGGCCTTGCTGGCCGGCCTCGCAGCCGGCATCGGGGGCAGCTTGCTGACCGCCGCCGGAGAGGCGATAGGCAGTATGTTCTCGTCCCCCTCAGGGACGATAACCACTGCCTCACCCAACGTGTTCATCAAc                                                                                                                      >  2:566046/1‑150 (MQ=255)
                            aCCTGCGGGTTCGGCGTGGCCTTGCTGGCCGGCCTCGCAGCCGGCATCGGGGGCAGCTTGCTGACCGCCGCCGGAGAGGCGATAGGCAGTATGTTCTCGTCCCCCTCAGGGACGATAACCACTGCCTCACCCAACGTGTTCATCAACAGc                                                                                                                   >  2:2349495/1‑150 (MQ=255)
                             ccTGCGGGTTCGGCGTGGCCTTGCTGGCCGGCCTCGCAGCCGGCATCGGGGGCAGCTTGCTGACCGCCGCCGGAGAGGCGATAGGCAGTATGTTCTCGTCCCCCTCAGGGACGATAACCACTGCCTCACCCAACGTGTTCATCAACAGcc                                                                                                                  <  1:1193345/150‑1 (MQ=255)
                                  gggTTCGGCGTGGCCTTGCTGGCCGGCCTCGCAGCCGGCATCGGGGGCAGCTTGCTGACCGCCGCCGGAGAGGCGATAGGCAGTATGTTCTCGTCCCCCTCAGGGACGATAACCACTGCCTCACCCAACgtg                                                                                                                               <  1:1661570/132‑1 (MQ=255)
                                  gggTTCGGCGTGGCCTTGCTGGCCGGCCTCGCAGCCGGCATCGGGGGCAGCTTGCTGACCGCCGCCGGAGAGGCGATAGGCAGTATGTTCTCGTCCCCCTCAGGGACGATAACCACTGCCTCACCCAACgtg                                                                                                                               >  2:1661570/1‑132 (MQ=255)
                                     ttCGGCGTGGCCTTGCTGGCCGGCCTCGCAGCCGGCATCGGGGGCAGCTTGCTGACCGCCGCCGGAGAGGCGATAGGCAGTATGTTCTCGTCCCCCTCAGGGACGATAACCACTGCCTCACCCAACGTGTTCATCaa                                                                                                                       >  1:2162382/1‑137 (MQ=255)
                                     ttCGGCGTGGCCTTGCTGGCCGGCCTCGCAGCCGGCATCGGGGGCAGCTTGCTGACCGCCGCCGGAGAGGCGATAGGCAGTATGTTCTCGTCCCCCTCAGGGACGATAACCACTGCCTCACCCAACGTGTTCATCaa                                                                                                                       <  2:2162382/137‑1 (MQ=255)
                                        ggCGTGGCCTTGCTGGCCGGCCTCGCAGCCGGCATCGGGGGCAGCTTGCTGACCGCCGCCGGAGAGGCGATAGGCAGTATGTTCTCGTCCCCCTCAGGGACGATAACCACTGCCTCACCCAACGTGTTCATCAACAGCCGCAAGgccgcc                                                                                                       >  1:1985212/1‑150 (MQ=255)
                                              gCCTTGCTGGCCGGCCTCGCAGCCGGCATCGGGGGCAGCTTGCTGACCGCCGCCGGAGAGGCGATAGGCAGTATGTTCTCGTCCCCCTCAGGGACGATAACCACTGCCTCACCCAACGTGTTCATCAACAGCCGCAAGGCCGCCCGCGTc                                                                                                 <  1:143746/150‑1 (MQ=255)
                                                cTTGCTGGCCGGCCTCGCAGCCGGCATCGGGGGCAGCTTGCTGACCGCCGCCGGAGAGGCGATAGGCAGTATGTTCTCGTCCCCCTCAGGGACGATAACCACTGCCTCACCCAACGTGTtcatca                                                                                                                        <  2:2039803/125‑1 (MQ=255)
                                                cTTGCTGGCCGGCCTCGCAGCCGGCATCGGGGGCAGCTTGCTGACCGCCGCCGGAGAGGCGATAGGCAGTATGTTCTCGTCCCCCTCAGGGACGATAACCACTGCCTCACCCAACGTGTtcatca                                                                                                                        >  1:2039803/1‑125 (MQ=255)
                                                 ttGCTGGCCGGCCTCGCAGCCGGCATCGGGGGCAGCTTGCTGACCGCCGCCGGAGAGGCGATAGGCAGTATGTTCTCGTCCCCCTCAGGGACGATAACCACTGCCTCACCCAACGTGTTCATCAACAGCCGCAAGGCCGCCCGCGTCGaa                                                                                              >  2:2325023/1‑150 (MQ=255)
                                                     tGGCCGGCCTCGCAGCCGGCATCGGGGGCAGCTTGCTGACCGCCGCCGGAGAGGCGATAGGCAGTATGTTCTCGTCCCCCTCAGGGACGATAACCACTGCCTCACCCAACGTGTTCATCAACAGCCGCAAGGCCGCCCGCGTCGaaaaaa                                                                                          <  1:594600/150‑1 (MQ=255)
                                                     tGGCCGGCCTCGCAGCCGGCATCGGGGGCAGCTTGCTGACCGCCGCCGGAGAGGCGATAGGCAGTATGTTCTCGTCCCCCTCAGGGACGATAACCACTGCCTCACCCAACGTGTTCATCAACAGCCGCAAGGCCGCCCGCGTCGaaaaaa                                                                                          <  1:1088413/150‑1 (MQ=255)
                                                       gccggccTCGCAGCCGGCATCGGGGACAGCTTGCTGACCGCCGCCGGAGAGGCGATAGGCAGTATGTTCTCGTCCCCCTCAGGGACGATAACCACTGCCTCACCCAACGTGTTCATCAACAGCCGCAAGGCCGCCCGCGTCGAAAAAAGc                                                                                        >  1:1874103/1‑150 (MQ=255)
                                                       gacggccTCGCAGCCGGCATCGGGGGCAGCTTGCTGACCGCCGCCGGAGAGGCGATAGGCAGTATGTTCTCGTCCCCCTCAGGGACGATAACCACTGCCTCACCCAACGTGTTCATCAACAGCCGCAAGGCCGCCCGCGTCGAAAAAAGc                                                                                        >  2:2278221/3‑150 (MQ=255)
                                                           gccTCGCAGCCGGCATCGGGGGCAGCTTGCTGACCGCCGCCGGAGAGGCGATAGGCAGTATGTTCTCGTCCCCCTCAGGGACGATAACCACTGCCTCACCCAACGTGTTCATCAACAGCCGCAAGGCCGCCCGCGTCGAAAAAAGCATCg                                                                                    >  2:161384/1‑150 (MQ=255)
                                                             cTCGCAGCCGGCATCGGGGGCAGCTTGCGGACCGCCGCCGGAGAGGCGATAGGCAGTATGTTCTCGGCCCCCTCAGGGACGATAACCGCCAGTGCTGGTGTTGGGTTCATCAACAGCCGCAAGGCCGCCCGCGTCGAAAAAAGCATCGGt                                                                                  <  2:1418492/150‑1 (MQ=255)
                                                              tCGCAGCCGGCATCGGGGGCAGCTTGCTGACCGCCGCCGGAGAGGCGATAGGCAGTATGTTCTCGTCCCCCTCAGGGACGATAACCACTGCCTCACCCAACGTGCTCATCAACAGCCGCAACGCCGCCCGCGTCGAAAAAAGCATCGGTg                                                                                 >  2:362736/1‑150 (MQ=255)
                                                               cGCAGCCGGCATCGGGGGCAGCTTGCTGACCGCCGCCGGAGAGGCGATAGGCAGTATGTTCTCGTCCCCCTCAGGGACGATAACCACTGCCTCACCCAACGTGTtc                                                                                                                            <  1:1979481/106‑1 (MQ=255)
                                                               cGCAGCCGGCATCGGGGGCAGCTTGCTGACCGCCGCCGGAGAGGCGATAGGCAGTATGTTCTCGTCCCCCTCAGGGACGATAACCACTGCCTCACCCAACGTGTtc                                                                                                                            >  2:1979481/1‑106 (MQ=255)
                                                                gCAGCCGGCATCGGGGGCAGCTTGCTGACCGCCGCCGGAGAGGCGATAGGCAGTATGTTCTCGTCCCCCTCAGGGACGATAACCACTGCCTCACCCAACGTGTTCATCAACAGCCGCAAGGCCGCCCGCGTCGAAAAAAGCATCGGTGcc                                                                               >  1:1197729/1‑150 (MQ=255)
                                                                gCAGCCGGCATCGGGGGCAGCTTGCTGACCGCCGCCGGAGAGGCGATAGGCAGTATGTTCTCGTCCCCCTCAGGGACGATAACCACTGCCTCACCCAACGTGTTCATCAACAGCCGCAAGGCCGCCCGCGTCGAAAAAAGCATCGGTGcc                                                                               >  1:1101747/1‑150 (MQ=255)
                                                                gCAGCCGGCATCGGGGGCAGCTTGCTACCCGCCGCCGGAGAGGCGATAGGCAGTATGTTCTCGTCCCCCTCAGGGACGATAACCACTGCCTCACCCAACGTGTTCATCAACAGCCGCAAGGCCGCCCGCGTCGAAAAAAGCATCGGTGcc                                                                               >  1:1044677/1‑150 (MQ=255)
                                                                    ccGGCATCGGGGGCAGCTTGCTGACCGCCGCCGGAGAGGCGATAGGCAGTATGTTCTCGTCCCCCTCAGGGACTATAACCACTGCCTCACCCAACGTGTTCATCAACAGCCGCAAg                                                                                                             <  2:1072574/116‑1 (MQ=255)
                                                                    ccGGCATCGGGGGCAGCTTGCTGACCGCCGCCGGAGAGGCGATAGGCAGTATGTTCTCGTCCCCCTCAGGGACTATAACCACTGCCTCACCCAACGTGTTCATCAACAGCCGCAAg                                                                                                             >  1:1072574/1‑116 (MQ=255)
                                                                           cGGGGGCAGCTTGCTGACCGCCACCGGAGAGGCGATAGGCAGTATGTTCTCGTCCCCCTCAGGGACGATAACCACTGCCTCACCCAACGTGTtcatca                                                                                                                        >  2:921167/1‑98 (MQ=255)
                                                                           cGGGGGCAGCTTGCTGACCGCCACCGGAGAGGCGATAGGCAGTATGTTCTCGTCCCCCTCAGGGACGATAACCACTGCCTCACCCAACGTGTtcatca                                                                                                                        <  1:921167/98‑1 (MQ=255)
                                                                             ggggCAGCTTGCTGACCGCCGCCGGAGAGGCGATAGGCAGTATGTTCTCGTCCCCCTCAGGGACGATAACCACTGCCTCACCCAACGTGTTCATCAACAGCCGCAAGGCCGCCCGCGTCGAAAAAAGCATCGGTGCCTGCGACAAGCAcc                                                                  >  2:424322/1‑150 (MQ=255)
                                                                             ggggCAGCTTGCTGACCGCCGCCGGAGAGGCGATAGGCAGTATGTTCTCGTCCCCCTCAGGGACGATAACCACTGCCTCACCCAACGTGTTCATCAACAGCCGCAAGGCCGCCCGCGTCGAAAAAAGCATCGGTGCCTGCGACAAGCAcc                                                                  >  2:1475393/1‑150 (MQ=255)
                                                                             ggggCAGCTTGCTGACCGCCGCCGGAGAGGCGATAGGCAGTATGTTCTCGTCCCCCTCAGGGACGATAACCACTGCCTCACCCAACGTGTTCATCAACAGCCGCAAGGCCGCCCGCGTCGAAAAAAGCATCGGTGCCTGCGACAAGCAcc                                                                  >  2:727952/1‑150 (MQ=255)
                                                                                gCAGCTTGCTGACCGCCGCCGGAGAGGCGATAGGCAGTATGTTCTCGTCCCCCTCAGGGACGATAACCACTGCCTCACCCAACGTGTTCATCAACAGCCGCAAGGCCGCAGGCGGCGAAAAAAGCATCGGTGCCTGCGACAAGCACCCAg                                                               >  1:633048/1‑150 (MQ=255)
                                                                                gCAGCTTGCTGACCCCAGCCGTAGAGGCGATAGGCAGTATGCTCTCGCCCCCCTCAGGGACGATAACCACTGCCTCACCCAACGTGTTCATCAACAGCCGCAAGGCCGCCCGCGTCGAAAAAAGCATCGGTGCCTGCGACAAGCACCCAg                                                               <  2:2118648/150‑1 (MQ=255)
                                                                                 cAGCTTGCTGACCGCCGCCGGAGAGGCGATAGGCAGTATGTTCTCGTCCCCCTCAGGGACGATAACCACTGCCTCACCCAACGTGTTCATCAACAGCCGCAAGGCCGCCCGCGTCGAAAAAAGCATCGGTGCCTGCGACAAGCACCCAgg                                                              <  1:2352847/150‑1 (MQ=255)
                                                                                         tGACCGCCGCCGGAGAGGCGATAGGCAGTATGTTCTCGTCCCCCTCAGCGACGATAACCACTGCCTCACCCAACGTGTTCATCAACAGCCGCAAGGCCGCCCGCGTCGAAAAAAGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGc                                                      >  1:1255302/1‑150 (MQ=255)
                                                                                             cgccgccgGAGAGGCGATAGGCAGTATGTTCTCGTCCCCCTCAGGGACGATAACCACTGCCTCACCCAACGTGTTCATCAACAGCCGCAAGGCCGCCCGCGTCGAAAAAAGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGCAGAt                                                  >  1:617373/1‑150 (MQ=255)
                                                                                             cgccgccgGAGAGGCGATAGGCAGTATGTTCTCGTCCCCCTCAGGGACGATAACCACTGCCTCACCCAACGTGTTCATCAACAGCCGCAAGGCCGCCCGCGTCGAAAAAAGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGCAGAt                                                  >  2:2354679/1‑150 (MQ=255)
                                                                                              gccgcccGAGAGGCGATAGGCAGTATGTTCTCGTCCCCCTCAGGGACGATAACCACTGCCTCACCCAACGTGTTCATCAACAGCCGCAAGGCCCACCGAGTCAAAAAAGGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGCAGAtt                                                 <  2:943452/150‑1 (MQ=255)
                                                                                               ccgccgGAGAGGCGATAGGCAGTATGTTCTCGTCCCCCTCAGGGACGATAACCACTGCCTCACCCAACGTGTTCATCAACAGCCGCAAGGCCGCCCGCGTCGAAAAAAGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGCAGATTg                                                <  1:161384/150‑1 (MQ=255)
                                                                                                 gccgGAGAGGCGATAGGCAGTATGTTCTCGTCCCCCTCAGGGACGATAACCACTGCCTCACCCAACGTGTTCATCAACAGCCGCAAGGCCGCCCGCGTCGAAAAAAGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGCAGATTGcc                                              <  2:400690/150‑1 (MQ=255)
                                                                                                 gccgGAGAGGCGATAGGCAGTATGTTCTCGTCCCCCTCAGGGACGATAACCACTGCCTCACCCAACGTGTTCATCAACAGCCGCAAGGCCGCCCGCGTCGAAAAAAGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGCAGATTGcc                                              <  1:1432991/150‑1 (MQ=255)
                                                                                                   cgGAGAGGCGATAGGCAGTATGTTCTCGTCCCCCTCAGGGACGATAACCACTGCCTCACCCAACGTGTTCATCAACAGCCGCAAGGCCGCCCGCGTCGAAAAAAGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGCAGATTGCCGa                                            <  1:1505803/150‑1 (MQ=255)
                                                                                                    ggAGAGGCGATAGGCAGTATGTTCTCGTCCCCCTCAGGGACGATAACCACTGCCTCACCCAACGTGTTCATCAACAGCCGCAAGGCCGCCCGCGTCGAAAAAAGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGCAGATTGCCGaa                                           <  2:176641/150‑1 (MQ=255)
                                                                                                      agagGCGATAGGCAGTATGTTCTCGTCCCCCTCAGGGACGATAACCACTGCCTCACCCAACGTGTTCATCAACAGCCGCAAGGCCGCCCGCGTCGAAAAAAGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGCAGATTGCCGAAgg                                         <  2:1197729/150‑1 (MQ=255)
                                                                                                          gCGATAGGCAGTATGTTCTCGTCCCCCTCAGGGACGATAACCACTGCCTCACCCAACGTGTTCATCAACAGCCGCAAGGCCGCCCGCGTCGAAAAAAGCATCGGTGCCTGCGACAAGCACCCAg                                                               <  2:1185644/124‑1 (MQ=255)
                                                                                                          gCGATAGGCAGTATGTTCTCGTCCCCCTCAGGGACGATAACCACTGCCTCACCCAACGTGTTCATCAACAGCCGCAAGGCCGCCCGCGTCGAAAAAAGCATCGGTGCCTGCGACAAGCACCCAg                                                               >  1:1185644/1‑124 (MQ=255)
                                                                                                          gCGATAGGCAGTATGTTCTCGTCCCCCTCAGGGACGATAACCACTGCCTCACCCAACGTGTTCATCAACAGCCGCAAGGCCGCCCGCGTCGAAAAAAGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGCAGATTGCCGAAGGCTCg                                     >  2:1077162/1‑150 (MQ=255)
                                                                                                           cGATAGGCAGTATGTTCTCGTCCCCCTCAGGGACGATAACCACTGCCTCACCCAACGTGTTCATCAACAGCCGCAAGGCCGCCCGCGTCGAAAAAAGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGCAGATTGCCGAAGGCTCGa                                    <  2:2043658/150‑1 (MQ=255)
                                                                                                           cGATAGGCAGTATGTTCTCGTCCCCCTCAGGGACGATAACCACTGCCTCACCCAACGTGTTCATCAACAGCCGCAAGGCCGCCCGCGTCGAAAAAAGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGCAGATTGCCGAAGGCTCGa                                    <  1:725219/150‑1 (MQ=255)
                                                                                                            gATAGGCAGTATGTTCTCGTCCCCCTCAGGGACGATAACCACTGCCTCACCCAACGTGTtc                                                                                                                            >  2:1348876/1‑61 (MQ=255)
                                                                                                            gATAGGCAGTATGTTCTCGTCCCCCTCAGGGACGATAACCACTGCCTCACCCAACGTGTtc                                                                                                                            <  1:1348876/61‑1 (MQ=255)
                                                                                                            gATAGGCAGTATGTTCTCGTCCCCCTCAGGGACGATAACCAATGCCTCACCGAACGTGGTCATCAACAGCCGGAAGGCCGCACGAGTCGAAAAAAGCATCGGTGCCTGCGACAAGCACCAAGGGACGGTGGAGATTGCCGAAGGCTCGAc                                   >  1:745248/1‑150 (MQ=255)
                                                                                                             aTAGGCAGTATGTTCTCGTCCCCCTCAGGGACGATAACCACTGCCTCACCCAACGTGTTCATCAACAGCCGCAAGGCCGCCCGCGTCGaaaaaa                                                                                          <  1:129871/94‑1 (MQ=255)
                                                                                                             aTAGGCAGTATGTTCTCGTCCCCCTCAGGGACGATAACCACTGCCTCACCCAACGTGTTCATCAACAGCCGCAAGGCCGCCCGCGTCGaaaaaa                                                                                          >  2:129871/1‑94 (MQ=255)
                                                                                                               aGGCAGTATGTTCTCGTCCCCCTCAGGGACGATAACCACTGCCTCACCCAACGTGTTCATCAACAGCCGCAAGGCCGCCCGCGTCGAAAAAAGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGCAGATTGCCGAAGGCTCGACCaa                                <  2:2002341/150‑1 (MQ=255)
                                                                                                                   aGTATGTTCTCGTCCCCCTCAGGGACGATAACCactgcctatcgcctctccggcggcggtcagcaagctgcccccgatgccggctgc                                                                                           <  2:256538‑M2/87‑55 (MQ=255)
                                                                                                                   aGTATGTTCTCGTCCCCCTCAGGGACGATAACCactgcctatcgccgctccggcggcggtcagcaagctgcccccgatgccggctgc                                                                                           >  1:256538‑M2/1‑33 (MQ=255)
                                                                                                                   aGTATGTTCTCGTCCCCCTCAGGGACGATAACAtactgcctatcgcctctccggcggcggtcagcaagctgcccccgatgccggctgcgaggccggccagcaaggccacgccgaacccgcaggtgaacgtggcaatggccaccgtggcca                            <  1:1310665‑M2/150‑118 (MQ=255)
                                                                                                                     tATGTTCTCGTCCCCCTCAGGGACGATAACCactgcctatcgcctctccggcggcggtcagcaagctgcccccgatgccggctgcgaggccg                                                                                    >  1:1872085‑M2/1‑31 (MQ=255)
                                                                                                                     tATGTTCTCGTCCCCCTCAGGGACGATAACCactgcctatcgcctctccggcggcggtcagcaagctgcccccgatgccggctgcgaggccg                                                                                    <  2:1872085‑M2/92‑62 (MQ=255)
                                                                                                                      aTGTTCTCGTCCCCCTCAGGGACGATAACCACTGCCTCACCCAACGTGTTCATCAACAGCCGCAAGGCCGCCCGCGTCGAAAAAAGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGCAGATTGCCGAAGGCTCGACCAACGTCTtc                         <  1:2058713/150‑1 (MQ=255)
                                                                                                                       tGTTCTCGTCCCCCTCAGGGACGATAACCACTGCCTCACCCAACGTGTTCATCAACAGCCGCAAGGCCGCCCGCGTCGAAAAAAGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGCAGATTGCCGAAGGCTCGACCAACGTCTtca                        >  1:1292773/1‑150 (MQ=255)
                                                                                                                        gTTCTCGTCCCCCTCAGGGACGATAACCACTGCCTCACCCAACGTGTTCATCAACAGCCGCAAGGCCGCCCGCGTCGAAAAAAGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGCAGATTGCCGAAGGCTCGACCAACGTCTtcat                       <  1:2354679/150‑1 (MQ=255)
                                                                                                                        gTTCTCGTCCCCCTCAGGGACGATAACCACTGCCTCACCCAACGTGTTCATCAACAGCCGCAAAGCCGCCCGCGTCGAAAAAAGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGCAGATTGCCGAAGGCTCGACCAACGTCTtcat                       >  1:690319/1‑150 (MQ=255)
                                                                                                                        gTTCTCGTCCCCCTCAGGGACGAGAACAtactgcctatcgcctctccggcggcggtcagcaagctgcccccgatgccggctgcgaggccggccagcaaggccacgccgaacccgcaggtgaacgtggcaatggccaccgtggccaccagc                       <  1:520174‑M2/150‑123 (MQ=255)
                                                                                                                         ttCTCGTCCCCCTCAGGGACGATAACCACTGCCTCACCCAACGTGTTCATCAACAGCCGCAAGGCCGCCCGCGTCGAAAAAAGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGCAGATTGCCGAAGGCTCGACCAACGTCTtcatc                      >  1:771563/1‑150 (MQ=255)
                                                                                                                         ttCTCGTCCCCCTCAGGGACGATAACCACTGCCTCACCCAACGTGTTCATCAACAGCCGCAAGGCCGCCCGCGTCGAAAAAAGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGCAGATTGCCGAAGGCTCGACCAACGTCTtcatc                      >  1:141728/1‑150 (MQ=255)
                                                                                                                         ttCTCGTCCCCCTCAGGGACGATAACCACTGCCTCACCCAACGTGTTCATCAACAGCCGCAAGGCCGCCCGCGTCGAAAAAAGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGCAGATTGCCGAAGGCTCGACCAACGTCTtcatc                      >  1:833900/1‑150 (MQ=255)
                                                                                                                          tctcGTCCCCCTCAGGGACGATAACCACTGCCTCACCCAACGTGTTCATCAACAGCCGCAAGGCCGACAGAATTCGAGGTTGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGCAGATTGCCGAAGGCTCGCCCAACGTCTtcatcc                     >  2:83774/1‑149 (MQ=255)
                                                                                                                           caggTCCCCCTTATTGTCGAGAACCACTGCCTCACCCAACGTGTTCATCAACAGCCGCAAGGCCGCCCGCGTCGAAAAAAGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGCAGATTGCCGAAGGCTCGACCAACGTCTTCATCaa                    >  2:1242799/4‑150 (MQ=255)
                                                                                                                            tcGTCCCCCTCAGGGACGATAACCACTGCCTCACCCAACGTGTTCATCAACAGcc                                                                                                                  >  2:1750576/1‑55 (MQ=255)
                                                                                                                            tcGTCCCCCTCAGGGACGATAACCACTGCCTCACCCAACGTGTTCATCAACAGCCGCAAGGCCGCCCGCGTCGAAAAAAGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGCAGATTGCCGAAGGCTCGACCAACGTCt                           <  2:2347123/142‑1 (MQ=255)
                                                                                                                            tcGTCCCCCTCAGGGACGATAACCACTGCCTCACCCAACGTGTTCATCAACAGCCGCAAGGCCGCCCGCGTCGAAAAAAGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGCAGATTGCCGAAGGCTCGACCAACGTCt                           >  1:2347123/1‑142 (MQ=255)
                                                                                                                            tcGTCCCCCTCAGGGACGATAACCACTGCCTCACCCAACGTGTTCATCAACAGCCGCAAGGCCGCCCGCGTCGAAAAAAGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGCAGATTGCCGAAGGCTCGACCAACGTCTTCATCAAc                   <  1:566046/150‑1 (MQ=255)
                                                                                                                            tcGTCCCCCTCAGGGACGATAACAtactgcctatcgcctctccggcggcggtcagcaagctgcccccgatgccggctgcgaggccggccagcaaggccacgccgaacccgcaggtgaacgtggcaatggccaccgtggccaccagcgcaa                   <  2:2153442‑M2/150‑127 (MQ=255)
                                                                                                                            tcGCCCCCCTCAGGGACGATAACCACTGCCTCACCCAACGTGTTCATCAACAGcc                                                                                                                  <  1:1750576/55‑1 (MQ=255)
                                                                                                                                  cccTCAGGGACGATAACCACTGCCTCACCCAACGTGTTCATCAACAGCCGCAAGGCCGCCCGCGTCGAAAAAAGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGCAGATTGCCGAAGGCTCGACCAACGTCTTCATCAACAGCGTc             <  2:833900/150‑1 (MQ=255)
                                                                                                                                   ccTCAGGGACGATAACCACTGCCTCACCCAACGTGTTCATCAACAGCCGCAAGGCCGCCCGCGTCGAAAAAAGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGCAGATTGCCGAAGGCTCGACCAACGTCTTCATCAACAGCGTcg            >  2:950013/1‑150 (MQ=255)
                                                                                                                                     tCAGGGACGATAACCACTGCCTCACCCAACGTGTtcat                                                                                                                          <  2:864301/38‑1 (MQ=255)
                                                                                                                                     tCAGGGACGATAACCACTGCCTCACCCAACGTGTtcat                                                                                                                          >  1:864301/1‑38 (MQ=255)
                                                                                                                                        gggACGATAACCACTGCCTCACCCAACGTGTTCATCAACAGCCGCAAGGCCGCCCGCGTCGAAAAAAGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGCAGATTGCCGAAGGCTCGa                                    >  2:245395/1‑121 (MQ=255)
                                                                                                                                        gggACGATAACCACTGCCTCACCCAACGTGTTCATCAACAGCCGCAAGGCCGCCCGCGTCGAAAAAAGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGCAGATTGCCGAAGGCTCGa                                    <  1:245395/121‑1 (MQ=255)
                                                                                                                                          gACGATAACCACTGCCTCACCCAACGTGTTCATCAACAGCCGCAAGGCCGCCCGCGTCGAAAAAAGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGCAGATTGCCGAAGGCTCGACCAACGTCTTCATCAACAGCGTcgccgccgc     >  2:111103/1‑150 (MQ=255)
                                                                                                                                             gATAACCACTGCCTCACCCAACGTGTTCATCAACAGCCGCAAGGCCGCCCGCGTCGAAAAAAGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGCAGATTGCCGAAGGCTCTACCAAc                               >  2:2255290/1‑121 (MQ=255)
                                                                                                                                             gATAACCACTGCCTCACCCAACGTGTTCATCAACAGCCGCAAGGCCGCCCGCGTCGAAAAAAGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGCAGATTGCCGAAGGCTCTACCAAc                               <  1:2255290/121‑1 (MQ=255)
                                                                                                                                             gATAACCACTGCCTCACCCAACGTGTTCATCAACAGCCGCAAGACCGCCCGCGTCGAAAAAAGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGCAGATTGCCGAAGGCTCGACCAACGTCTTCATCAACAGCGTCGCCGCcgcgcg  >  2:1744819/1‑150 (MQ=255)
                                                                                                                                                   |                                                                                                                                               
GGTGGCCACGGTGGCCATTGCCACGTTCACCTGCGGGTTCGGCGTGGCCTTGCTGGCCGGCCTCGCAGCCGGCATCGGGGGCAGCTTGCTGACCGCCGCCGGAGAGGCGATAGGCAGTATGTTCTCGTCCCCCTCAGGGACGATAACCACTGCCTCACCCAACGTGTTCATCAACAGCCGCAAGGCCGCCCGCGTCGAAAAAAGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGCAGATTGCCGAAGGCTCGACCAACGTCTTCATCAACAGCGTCGCCGCCGCGCG  >  NC_002947/3511465‑3511755

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.