New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 444312085 (0.960)8 (0.090) 5/236 NT 8.5% coding (906/1314 nt) nicT metabolite transport protein NicT
?NC_002947 = 4443151 90 (1.060)coding (875/1314 nt) nicT metabolite transport protein NicT

Only 100 of 107 total aligned reads displayed.

GCTGAACAAGGTGCTGCTGGCCATGGCGATTGCACCAATGATAAACGGCACGATGATGTGCCAGCGGCGCTCGCGGTGGCGGTCGGAGCTGGCCCCGATCATGAGCATGCCGGCCAGCGCGGCCAGGCTTGGAATGGCCGTGAGCAGGCCGATATGGAAGGTGTCGCTGACGCCCGCATCGCGGATGAAGGTCGGCATCCAGAAGCCCATCGCATAGGCGCTGAGCAGGATCGAAAAGTC‑GATA‑CCACCGAGCATCCACACCTTAAGGTTGAAGAAGCCATCGCGGAAGCTGTGT  >  NC_002947/4443006‑4443300
                                                                                                                                                 |                                                                                                                                                       
gCTGAACAAGGTGCTGCTGGCCATGGCGATTGCACCAATGATAAACGGCACGATGATGTGCCAGCGGCGCTCGCGGTGGCGGTCGGAGCTGGCCCCGATCATGAGCATGCCGGCCAGCGCGGCCAGGCTTGGAATGGCCGTGAGCAggcc                                                                                                                                                     <  2:1098381‑M2/150‑5 (MQ=255)
gCTGAACAAGGTGCTGCTGGCCATGGCGATTGCACCAATGATAAACGGCACGATGATGTGCCAGCGGCGCTCGCGGTGGCGGTCGGAGCTGGCCCCGATCATGAGCATGCCGGCCAGCGCGGCCAGGCTTGGAATGGCCGTGAGCAggcc                                                                                                                                                     <  1:1984545‑M2/150‑5 (MQ=255)
gCTGAACAAGGTGCTGCTGGCCATGGCGATTGCACCAATGATAAACGGCACGATGATGTGCCAGCGGCGCTCGCGGTGGCGGTCGGAGCTGGCCCCGATCATGAGCATGCCGGCCAGCGCGGCCAGGCTTGGAATGGCCGTGAGCAggcc                                                                                                                                                     >  1:1406103‑M2/1‑146 (MQ=255)
     aCAAGGTGCTGCTGGCCATGGCGATTGCACCAATGATAAACGGCACGATGATGTGCCAGCGGCGCTCGCGGTGGCGGTCGGAGCTGGCCCCGATCATGAGCATGCCGGCCAGCGCGGCCAGGCTTGGAATGGCCGTGAGCAGGCCGatat                                                                                                                                                <  2:2358345/150‑1 (MQ=255)
      cAAGGTGCTGCTGGCCATGGCGATTGCACCAATGATAAACGGCACGATGATGTGCCAGCGGCGCTCGCGGTGGCGGTCGGAGCTGGCCCCGATCATGAGCATGCCGGCCAGCGCGGCCAGGCTTGGAATGGCCGTGAGCAGGCCGATATg                                                                                                                                               >  2:1036270/1‑150 (MQ=255)
      cAAGGTGCTGCTGGCCATGGCGATTGCACCAATGATAAACGGCACGATGATGTGCCAGCGGCGCTCGCGGTGGCGGTCGGAGCTGGCCCCGATCATGAGCATGCCGGCCAGCGCGGCCAGGCTTGGAATGGCCGTGAGCAGGCCGATATg                                                                                                                                               >  1:1577736/1‑150 (MQ=255)
        aGGTGCTGCTGGCCATGGCGATTGCACCAATGATAAACGGCACGATGATGTGCCAGCGGCGCTCGCGGTGGCGGTCGGAGCTGGCCCCGATCATGAGCATGCCGGCCAGCGCGGCCAGGCTTGGAATGGCCGTGAGCAGGCCGATATGGa                                                                                                                                             <  2:1308116/150‑1 (MQ=255)
         ggTGCTGCTGGCCATGGCGATTGCACCAATGATAAACGGCACGATGATGTGCCAGCGGCGCTCGCGGTGGCGGTCGGAGCTGGCCCCGATCATGAGCATGCCGGCCAGCGCGGCCAGGCTTGGAATGGCCGTGAGCAGGCCGATATGGaa                                                                                                                                            >  1:1670394/1‑150 (MQ=255)
         ggTGCTGCTGGCCATGGCGATTGCACCAATGATAAACGGCACGATGATGTGCCAGCGGCGCTCGCGGTGGCGGTCGGAGCTGGCCCCGATCATGAGCATGCCGGCCAGCGCGGCCAGGCTTGGAATGGCCGTGAGCAGGCCGATATGGaa                                                                                                                                            >  1:480184/1‑150 (MQ=255)
          gTGCTGCTGGCCATGGCGATTGCACCAATGATAAACGGCACGATGATGTGCCAGCGGCGCTCGCGGTGGCGGTCGGAGCTGGCCCCGATCATGAGCATGCCGGCCAGCGCGGCCAGGCTTGGAATGGCCGTGAGCAGGCCGATATGGAAg                                                                                                                                           <  2:2214284/150‑1 (MQ=255)
          gTGCTGCTGGCCATGGCGATTGCACCAATGATAAACGGCACGATGATGTGCCAGCGGCGCTCGCGGTGGCGGTCGGAGCTGGCCCCGATCATGAGCATGCCGGCCAGCGCGGCCAGGCTTGGAATGGCCGTGAGCAGGCCGATATGGAAg                                                                                                                                           <  2:966511/150‑1 (MQ=255)
               gctgGCCATGGCGATTGCACCAATGATAAACGGCACGTTGATGTGCCAGCGGCGCTCGCGGTGGCGGTCGGAGCTGGCCCCGATCATGAGCATGCCGGCCAGCGCGGCCAGGCTTGGAATGGCCGTGAGCAGGCCGATATGGAAGGTGTc                                                                                                                                      <  1:738225/150‑1 (MQ=255)
                   gCCATGGCGATTGCACCAATGATAAACGGCACGATGATGTGCCAGCGGCGCTCGCGGTGGCGGTCGGAGCTGGCCCCGATCATGAGCATGCCGGCCAGCGCGGCCAGGCTTGGAATGGCCGTGAGCAGGCCGATATGGAAGGTGTCGCTg                                                                                                                                  >  1:1493419/1‑150 (MQ=255)
                   gCCATGGCGATTGCACCAATGATAAACGGCACGATGATGTGCCAGCGGCGCTCGCGGTGGCGGTCGGAGCTGGCCCCGATCATGAGCATGCCGGCCAGCGCGGCCAGGCTTGGAATGGCCGTGAGCAGGCCGATATGGAAGGTGTCGCTg                                                                                                                                  >  2:1624231/1‑150 (MQ=255)
                    ccATGGCGATTGCACCAATGATAAACGGCACGATGATGTGCCAGCGGCGCTCGCGGTGGCGGTCGGAGCTGGCCCCGATCATGAGCATGCCGGCCAGCGCGGCCAGGCTTGGAATGGCCGTGAGCAGGCCGATATGGAAGGTGTCGCTGa                                                                                                                                 <  2:480184/150‑1 (MQ=255)
                     cATGGCGATTGCACCAATGATAAACGGCACGATGATGTGCCAGCGGCGCTCGCGGTGGCGGTCGGAGCTGGCCCCGATCATGAGCATGCCGGCCAGCGCGGCCAGGCTTGGAATGGCCGTGAGCAGGCCGATATGGAAGGTGTCGCTGAc                                                                                                                                >  2:412187/1‑150 (MQ=255)
                      aTGGCGATTGCACCAATGATAAACGGCACGATGATGTGCCAGCGGCGCTCGCGGTGGCGGTCGGAGCTGGCCCCGATCATGAGCATGCCGGCCAGCGCGGCCAGGCTTGGAATGGCCGTGAGCAGGCCGATATGGAAGGTGTCGCTGACg                                                                                                                               >  2:1459245/1‑150 (MQ=255)
                       tGGCGATTGCACCAATGATAAACGGCACGATGATGTGCCAGCGGCGCTCGCGGTGGCGGTCGGAGCTGGCCCCGATCATGAGCATGCCGGCCAGCGCGGCCAGGCTTGGAATGGCCGTGAGCAGGCCGATATGGAAGGTGTCGCTGACGc                                                                                                                              >  2:2146368/1‑150 (MQ=255)
                           gATTGCACCAATGATAAACGGCACGATGATGTGCCAGCGGCGCTCGCGGTGGCGGTCGGAGCTGGCCCCGATCATGAGCATGCCGGCCAGCGCGGCCAGGCTTGGAATGGCCGTGAGCAGGCCGATATGGAAGGTGTCGCTGACGCCCGc                                                                                                                          >  1:518352/1‑150 (MQ=255)
                                cACCAATGATAAACGGCACGATGATGTGCCAGCGGCGCTCGCGGTGGCGGTCGGAGCTGGCCCCGATCATGAGCATGCCGGCCAGCGCGGCCAGGCTTGGAATGGCCGTGAGCAGGCCGATATGGAAGGTGTCGCTGACGCCCGCATcgc                                                                                                                     >  2:2373822/1‑150 (MQ=255)
                                cACCAATGATAAACGGCACGATGATGTGCCAGCGGCGCTCGCGGTGGCGGTCGGAGCTGGCCCCGATCATGAGCATGCCGGCCAGCGCGGCCAGGCTTGGAATGGCCGTGAGCAGGCCGATATGGAAGGTGTCGCTGACGCCCGCATcgc                                                                                                                     >  1:1924027/1‑150 (MQ=255)
                                 aCCAATGATAAACGGCACGATGATGTGCCAGCGGCGCTCGCGGTGGCGGTCGGAGCTGGCCCCGATCATGAGCATGCCGGCCAGCGCGGCCAGGCTTGGAATGGCCGTGAGCAGGCCGATATGGAAGGTGTCGCTGACGCCCGCATcgcg                                                                                                                    <  2:1984545/150‑1 (MQ=255)
                                   cAATGATAAACGGCACGATGATGTGCCAGCGGCGCTCGCGGTGGCGGTCGGAGCTGGCCCCGATCATGAGCATGCCGGCCAGCGCGGCCAGGCTTGGAATGGCCGTGAGCAGGCCGATATGGAAGGTGTCGCTGACGCCCGCATCGCGGa                                                                                                                  >  1:1575106/1‑150 (MQ=255)
                                   cAATGATAAACGGCACGATGATGTGCCAGCGGCGCTCGCGGTGGCGGGCGGAGCTGGCCCCGATCATGAGCATGCCGGCCAGCGCGGCCAGGCTTGGAATGGCCGTGAGCAGGCCGATATGGAAGGTGTCGCTGACGCCCGCATCGCGGa                                                                                                                  >  2:1129808/1‑150 (MQ=255)
                                        aTAAACGGCACGATGATGTGCCAGCGGCGCTCGCGGTGGCGGTCGGAGCTGGCCCCGATCATGAGCATGCCGGCCAGCGCGGCCAGGCTTGGAATGGCCGTGAGCAGGCCGATATGGAAGGTGTCGCTGACGCCCGCATCGCGGATGAAg                                                                                                             <  2:1493419/150‑1 (MQ=255)
                                           aaCGGCACGATGATGTGCCAGCGGCGCTCGCGGTGGCGGTCGGAGCTGGCCCCGATCATGAGCATGCCGGCCAGCGCGGCCAGGCTTGGAATGGCCGTGAGCAGGCCGATATGGAAGGTGTCGCTGACGCCCGCATCGCGGATGAAGGTc                                                                                                          <  2:1577736/150‑1 (MQ=255)
                                            aCGGCACGATGATGTGCCAGCGGCGCTCGCGGTGGCGGTCGGAGCTGGCCCCGATCATGAGCATGCCGGCCAGCGCGGCCAGGCTTGGAATGGCCGTGAGCAGGCCGATATGGAAGGTGTCGCTGACGCCCGCATCGCGGATGAAGGTCg                                                                                                         <  1:1781892/150‑1 (MQ=255)
                                            aCGGCACGATGATGTGCCAGCGGCGCTCGCGGTGGCGGTCGGAGCTGGCCCCGATCATGAGCATGCCGGCCAGCGCGGCCAGGCTTGGAATGGCCGTGAGCAGGCCGATATGGAAGGTGTCGCTGACGCCCGCATCGCGGATGAAGGTCg                                                                                                         >  1:1595694/1‑150 (MQ=255)
                                             cGGCACGATGATGTGCCAGCGGCGCTCGCGGTGGCGGTCGGAGCTGGCCCCGATCATGAGCATGCCGGCCAGCGCGGCCAGGCTTGGAATGGCCGTGAGCAGGCCGATATGGAAGGTGTGGCTGACGCCCGCATCGCGGATGAAGGTCgg                                                                                                        >  1:870175/1‑150 (MQ=255)
                                                 aCGATGATGTGCCAGCGGCTCTCGCGGTGGCGGTCGGAGCTGGCCCCGATCATGAGCATGCCGGCCAGCGCGGCCAGGCTTGGAATGGCCGTGAGCAGGCCGATATGGAAGGTGTCGCTGACGCCCGCATcg                                                                                                                      >  2:102194/1‑132 (MQ=255)
                                                 aCGATGATGTGCCAGCGGCGCTCGCGGTGGCGGTCGGAGCTGGCCCCGATCATGAGCATGCCGGCCAGCGCGGCCAGGCTTGGAATGGCCGTGAGCAGGCCGATATGGAAGGTGTCGCTGACGCCCGCATcg                                                                                                                      <  1:102194/132‑1 (MQ=255)
                                                      gatgTGCCAGCGGCGCTCGCGGTGGCGGTCGGAGCTGGCCCCGATCATGAGCATGCCGGCCAGCGCGGCCAGGCTTGGAATGGCCGTGAGCAGGCCGATATGGAAGGTGTCGCTGACGCCCGCATCGCGGATGAAg                                                                                                             <  2:1378980/136‑1 (MQ=255)
                                                      gatgTGCCAGCGGCGCTCGCGGTGGCGGTCGGAGCTGGCCCCGATCATGAGCATGCCGGCCAGCGCGGCCAGGCTTGGAATGGCCGTGAGCAGGCCGATATGGAAGGTGTCGCTGACGCCCGCATCGCGGATGAAg                                                                                                             >  1:1378980/1‑136 (MQ=255)
                                                        tgtgCCAGCGGCGCTCGCGGTGGCGGTCGGAGCTGGGCCCGATAATGGGCAGGTGGGCCAGCGCGGCGAGGCTGGGAATGGCCGGTCGAGGGCCGGGCTGGAAGGTGTCGCGTACGCCCGCATCGCGGGTGGAGGTCGGCACCCAGAAgg                                                                                             >  2:749014/1‑149 (MQ=255)
                                                        tgtgCCAGCGGCGCTCGCGGTGGCGGTCGGAGCTGGCCCCGATCATGAGCATGCCGGCCAGCGCGGCCAGGCTTGGAATGGCCGTGAGCAGGCCGATATGTAAGGTTTCTCTGACGCCCGCATCGCGGATGAAGGTCGGCATCCAGAAGc                                                                                             <  1:1624231/150‑1 (MQ=255)
                                                        tgtaCCAGCGGCGCTCGCGGTGGCGGTCGGAGCTGGCCCCGATCATGAGCATGCCGGCCAGCGCGGCCAGGCTTGGAATGGCCGTGAGCAGGCCGATATGGAAGGTGTCGCTGACGCCCGCATCGCGGATGAAGGTCGGCATCCAGAAGc                                                                                             >  1:769281/1‑150 (MQ=255)
                                                            ccAGCGGCGCTCGCGGTGGCGGTCGGAGCTGGCCCCGATCATTAGCATGCCGGCCAGCGCGGCCAGGCTTGGAATGGCCGTGAGCAGGCCGATATGGAAg                                                                                                                                           <  2:934187/100‑1 (MQ=255)
                                                            ccAGCGGCGCTCGCGGTGGCGGTCGGAGCTGGCCCCGATCATGAGCATGCCGGCCAGCGCGGCCAGGCTTGGAATGGCCGTGAGCAGGCCGATATGGAAg                                                                                                                                           >  1:934187/1‑100 (MQ=255)
                                                             cAGCGGCGCTCGCGGTGGCGGTCGGAGCTGGCCCCGATCATGAGCATGCCGGCCAGCGCGGCCAGGCTTGGAATGGCCGTGAGCAGGCCGATATGGAAGGTGTCGCTGACGCCCGCATCGCGGATGAAGGTCGGCATCCAGAAGCCCATc                                                                                        <  1:1098381/150‑1 (MQ=255)
                                                                cggcgCTCGCGGTGGCGGTCGGAGCTGGCCCCGATCATGAGCATGCCGGCCAGCGCGGCCAGGCTTGGAATGGCCGTGAGCAGGCCGATATGGAAGGTGTCGCTGACGCCCGCATCGCGGATGAAGGTCGGCATCCAGAAGCCCATCGCa                                                                                     <  2:1924027/150‑1 (MQ=255)
                                                                     cTCGCGGTGGCGGTCGGAGCTGGCCCCGATCATGAGCATGCCGGCCAGCGCGGCCAGGCTTGGAATGGCCGTGAGCAGGCCGATATGGAAGGTGTCGCTGACGCCCGCATCGCGGATGAAGGTCGGCATCCAGAAGCCCATCGCATAGgc                                                                                <  2:2194222/150‑1 (MQ=255)
                                                                          ggTGGCGGTCGGAGCTGGCCCCGATCATGAGCATGCCGGCCAGCGCGGCCAGGCTTGGAATGGCCGTGAGCAGGCCGATATGGAAGGTGTCGCTGACGCCCGCATCGCGGATGAAGGTCGGCATCCAGAAGCCCATCGCATAGGCGCTGa                                                                           >  1:875962/1‑150 (MQ=255)
                                                                             ggCGGTCGGAGCTGGCCCCGATCATGAGCATGCCGGCCAGCGCGGCCAGGCTTGGAATGGCCGTGAGCAGGCCGATATGGAAGGTGTCGCTGACGCCCGCATCGCGGATGAAGGTCGGCATCCAGAAGCCCATCGCATAGGCGCTGAGCa                                                                        <  1:394112/150‑1 (MQ=255)
                                                                             ggCGGTCGGAGCTGGCCCCGATCATGAGCATGCCGGCCAGCGCGGCCAGGCTTGGAATGGCCGTGAGCAGGCCGATATGGAAGGTGTCGCTGACGCCCGCATCGCGGATGAAGGTCGGCATCCAGAAGCCCATCGCATAGGCGCTGAGCa                                                                        <  1:2373822/150‑1 (MQ=255)
                                                                                 gTCGGAGCTGGCCCCGATCATGAGCATGCCGGCCAGCGCGGCCAGGCTTGGAATGGCCGTGAGCAGGCCGATATGGAAGGTGTCGCTGACGCCCGCATCGCGGATGAAGGTCGGc                                                                                                       <  1:1923875/115‑1 (MQ=255)
                                                                                 gTCGGAGCTGGCCCCGATCATGAGCATGCCGGCCAGCGCGGCCAGGCTTGGAATGGCCGTGAGCAGGCCGATATGGAAGGTGTCGCTGACGCCCGCATCGCGGATGAAGGTCGGc                                                                                                       >  2:1923875/1‑115 (MQ=255)
                                                                                 gTCGGAGCTGGCCCCGATCATGAGCATGCCGGCCAGCGCGGCCAGGCTTGGAATGGCCGTGAGCAGGCCGATATGGAAGGTGTCGCTGACGCCCGCATCGCGGATGAAGGTCGGCATc                                                                                                    >  2:2366664/1‑118 (MQ=255)
                                                                                 gTCGGAGCTGGCCCCGATCATGAGCATGCCGGCCAGCGCGGCCAGGCTTGGAATGGCCGTGAGCAGGCCGATATGGAAAGTGTCGCTGACGCCCGCATCGCGGATGAAGGTCGGCATc                                                                                                    <  1:2366664/118‑1 (MQ=255)
                                                                                  tCGGAGCTGGCCCCGATCATGAGCATGCCGGCCAGCGCGGCCAGGCTTGGAATGGCCGTGAGCAGGCCGATATGGAAGGTGTCGCTGACGCCCGCATCGCGGATGAAGGTCGGCATCCAGAAGCCCATCGCATAGGCGCTGAGCAGGATc                                                                   <  2:2213749/150‑1 (MQ=255)
                                                                                   cGGAGCTGGCCCCGATCATGAGCATGCCGGCCAGCGCGGCCAGGCTTGGAATGGCCGTGAGCAGGCCGATATGGAAGGTGTCGCTGACGCCCGCATCGCGGATGAAGGTCGGCATCCAGAAGCCCATCGCATAGGCGCTGAGCAGGATCg                                                                  >  2:1632389/1‑150 (MQ=255)
                                                                                       gCTGGCCCCGATCATGAGCATGCCGGCCAGCGCGGCGAGGCTTGGAATGGCCGTGAGCAGGCCGATATGGAACGTGGCGCTGACGCCCGCATCGCGGATGAAGGTCGGCATCCAGAAGCCCATCGCATAGGCGCTGAGCAGGATCGaaaa                                                              <  1:1141271/150‑1 (MQ=255)
                                                                                            ccccGATCATGAGCATGCCGGCCAGCGCGGCCAGGCTTGGAATGGCCGTGAGCAGGCCGATATGGAAGGTGTCGCTGACGCCCGCATCGCGGATGAAGGTCGGCATCCAGAAGCCCATCGCATAGGCGCTGAGCAGGATCGAAAAGTC‑Ga                                                        <  1:970879/150‑1 (MQ=255)
                                                                                            ccccGATCATGAGCATGCCGGCCAGCGCGGCCAGGCTTGGAATGGCCGTGAGCAGGCCGATATGGAAGGTGTCGCTGACGCCCGCATCGCGGATGAAGGTCGGCATCCAGAAGCCCATCGCATAGGCGCTGAGCAGGATCGAAAAGTC‑Ga                                                        <  2:1670394/150‑1 (MQ=255)
                                                                                             cccGATCATGAGCATGCCGGCCAGCGCGGCCAGGCTTGGAATGGCCGTGAGCAggccggcatgctcatgatcggggccagctccgaccgccaccgcgagcgccgctggcacatcatcgtgccgtttatcattggtgcaatcgccatggcc                                                        <  2:61803‑M2/150‑98 (MQ=255)
                                                                                             cccGATCATGAGCATGCCGGCCAGCGCGGCCAGGCTTGGAATGGCCGTGAGCAggccgatatgctcatgatcggggccagctccgaccgccaccgcgagcgccgctggcacatcatcgtgccgtttatcattggtgcaatcgccatggc                                                         <  2:1170468‑M2/149‑97 (MQ=255)
                                                                                             cccGATCATGAGCATGCCGGCCAGCGCGGCCAGGCTTGGAATGGCCGTGAGCAggccgatatgctcatgatcggggccagctccgaccgccaccgcgagcgccgctggcacatcatcgtgccgtttatcattggtgcaatcgccatggc                                                         >  1:1170468‑M2/1‑53 (MQ=255)
                                                                                             cccGATCATGAGCATGCCGGCCAGCGCGGCCAGGCTTGGAATGGCCGTGAGCAGGCCGATATGGa                                                                                                                                             >  1:932957/1‑65 (MQ=255)
                                                                                             cccGATCATGAGCATGCCGGCCAGCGCGGCCAGGCTTGGAATGGCCGTGAGCAGGCCGATATGGa                                                                                                                                             <  2:932957/65‑1 (MQ=255)
                                                                                             cccGATCATGAGCATGCCGGCCAGCGCGGCCAGGCTTGGAATGGCCGTGAGCAGGCCGATATGGAAGGTGTCGCTGACGCCCGCATCGCGGATGAAGGTCGGCATCCAGAAGCCCATCGCATAGGCGCTGAGCAGGATCGaa                                                                <  1:1228376/142‑1 (MQ=255)
                                                                                             cccGATCATGAGCATGCCGGCCAGCGCGGCCAGGCTTGGAATGGCCGTGAGCAGGCCGATATGGAAGGTGTCGCTGACGCCCGCATCGCGGATGAAGGTCGGCATCCAGAAGCCCATCGCATAGGCGCTGAGCAGGATCGAAAAGTC‑GAt                                                       >  2:1845513/1‑150 (MQ=255)
                                                                                              ccGATCATGAGCATGCCGGCTAGCGCGGCCAGGCTTGGAATGGCCGTGAGCAGGCCGATATGGAAGGTTTCGCTGACGCCCGCATCGCGGATGAAGGTCGGCATCCAGAAGCCCATCGCATAGGCGCTGAGCAGGATCGAAAAGTC‑GATa                                                      >  2:1146698/1‑150 (MQ=255)
                                                                                              ccGATCATGAGCATGCCGGCCAGCGCGGCCAGGCTTGGAATGGCCGTGAGCAGGCCGATATGGAAGGTGTCGCTGACGCCCGCATCGCGGATGAAGGTCGGCATCCAGAAGCCCATCGCATAGgc                                                                                <  1:1452404/125‑1 (MQ=255)
                                                                                              ccGATCATGAGCATGCCGGCCAGCGCGGCCAGGCTTGGAATGGCCGTGAGCAGGCCGATATGGAAGGTGTCGCTGACGCCCGCATCGCGGATGAAGGTCGGCATCCAGAAGCCCATCGCATAGgc                                                                                >  2:1452404/1‑125 (MQ=255)
                                                                                              ccGATCATGAGCATGCCGGCCAGCGCGGCCAGGCTTGGAATGGCCGTGAGCAGGCCGATATGGAAGGTGTCGCTGACGCCCGCATCGCGGATGAAGGTCGGCATCCAGAAGCCCATCGCATAGGCGCTGAGCAGGATCGAAAAGTC‑GATa                                                      >  2:2263814/1‑150 (MQ=255)
                                                                                              ccGATCATGAGCATGCCGGCCAGCGCGGCCAGGCTTGGAATGGCCGTGAGCAGGCCGATATGGAAGGTGTCGCTGACGCCCGCATCGCGGATGAAGGTCGGCATCCAGAAGCCCATCGCATAGGCGCTGAGCAGGATCGAAAAGTC‑GATa                                                      <  1:1459245/150‑1 (MQ=255)
                                                                                                  tCATGAGCATGCCGGCCAGCGCGGCCAGGCTTGGAATGGCCGTGAGCAGGCCGATATGGAAGGTGTCGCTGACGCCCGCATCGCGGATGAAGGTCGGCATCCAGAAGCCCATCGCATAGGCGCTGAGCAGGATCGAAAAGTC‑GATa‑ccac                                                 <  2:1559856/150‑1 (MQ=255)
                                                                                                  tCATGAGCATGCCGGCCAGCGCGGCCAGGCTTGGAATGGCCGTGAGCAGGCCGATATGGAAGGTGTCGCTGACGCCCGCATCGCGGATGAAGGTCGGCATCCAGAAGCCCACCGCATAGGCGCTGAGCAGGATCGAAAAGTC‑GATa‑ccac                                                 >  2:1509638/1‑150 (MQ=255)
                                                                                                    aTGAGCATGCCGGCCAGCGCGGCCAGGCTTGGAATGGCCGTGAGCAGGCCGATATGTAAGGTGTCGCTGAAGCCCGCATCGCGGATGAAGGTCGGCATCCAGAAGCCGATCGCAAAGGCGCTGGGCACGTTAGAAGAGTA‑GATa‑ccacag                                               >  2:459529/1‑148 (MQ=255)
                                                                                                    aTGAGCATGCCGGCCAGCGCGGCCAGGCTTGGAATGGCCGTGAGCAGGCCGATATGGAAGGTGTCGCTGACGCCCGCATCGCGGATGAAGGTCGGCATCCAGAAGCCCATCGCATAGGCGCTGATCAGGATCGAAAAGTC‑GATA‑CCACCg                                               >  1:507155/1‑150 (MQ=255)
                                                                                                        gCATGCCGGCCAGCGCGGCCAGGCTTGGAATGGCCGTGAGCAggccggcatgctcatgatcggggccagctccgaccgccaccgcgagcgccgctggcacatcatcgtgccgtttatcattggtgcaatcgccatggccagcagcacctt                                             <  2:368293‑M2/150‑109 (MQ=255)
                                                                                                        gCATGCCGGCCAGCGCGGCCAGGCTTGGAATGGCCGTGAGCAGGCCGATATGGAAGGTGTCGCTGACGCCCGCATCGCGGATGAAGGTCGGCATCCATAAGCCCATCGCATAGGCGCTGAGCAGGATCGAAAAGTC‑GATA‑CCACCGAGCa                                           >  1:1940703/1‑150 (MQ=255)
                                                                                                          aTGCCGGCCAGCGCGGCCAGGCTTGGAATGGCCGTGAGCAGGCCGATATGGAAGGTGTCGCTGACGCCCGCATCGCGGATGAAGGTCGGCATCCAGAAGCCCATCGCATAGGCGCTGAGTAGGATCGAAAAGTC‑GATA‑CCACCGAGCATc                                         <  1:412187/150‑1 (MQ=255)
                                                                                                           tGCCGGCCAGCGCGGCCAGGCTTGGAATGGCCGTGAGCAGGCCGATATGGAAGGTGTCGCTGACGCCCGCATCGCGGATGAAGGTCGGCATACAGAAGCAAATCGCATAGGCGCTGAGTACGACCGAAAAGGC‑GAGA‑CCACCGAGCATcc                                        >  2:872557/1‑150 (MQ=255)
                                                                                                             ccGGCCAGCGCGGCCAGGCTTGGAATGGCCGTGAGCAggccggcatgctcatgatcggggccagctccgaccgccaccgcgagcgccgctggcacatcatcgtgccgtttatcattggtgcaatcgccatggccagcagcaccttgttca                                        >  1:368293‑M2/1‑37 (MQ=255)
                                                                                                              cGGCCAGCGCGGCCAGGCTTGGAATGGCCGTGAGCAGGCCGATATGGAAGGTGTCGCTGACGCCCGCATCGCGGATGAAGGTCGGCATCCAGAAGCCCATCGCATAGgcgc                                                                              >  1:2337096/1‑111 (MQ=255)
                                                                                                              cGGCCAGCGCGGCCAGGCTTGGAATGGCCGTGAGCAGGCCGATATGGAAGGTGTCGCTGACGCCCGCATCGCGGATGAAGGTCGGCATCCAGAAGCCCATCGCATAGgcgc                                                                              <  2:2337096/111‑1 (MQ=255)
                                                                                                              cGGCCAGCGCGGCCAGGCTTGGAATGGCCGTGAGCAGGCCGATATGGAAGGTGTCGCTGACGCCCGCATCGCGGATGAAGGTCGGCATCCAGAAGCACATCGCATAGGCGCTGAGCAGGATCGAAAAGTC‑GATA‑CCACCGAGCaagatcg                                     >  1:531275/1‑144 (MQ=255)
                                                                                                                  cAGCGCGGCCAGGCTTGGAATGGCCGTGAGCAGGCCGATATGGGAGGTGTCGCTGACGCCCGCATCGCGGATGAAGGTCGGGATCCAGAAGCCCATCGCATAGGCGCTGAGCAGGATCGAAAAGTC‑GATA‑CCACCGAGCATCCACACCtt                                 >  1:2278604/1‑150 (MQ=255)
                                                                                                                      gcgGCCAGGCTTGGAATGGCCGCG‑‑CTggccggcatgctcatgatcggggccagctccgaccgccaccgcgagcgccgctggca                                                                                                <  1:1242238‑M2/83‑58 (MQ=255)
                                                                                                                      gcgGCCAGGCTTGGAATGGCCGCG‑‑CTggccggcatgctcatgatcggggccagctccgaccgccaccgcgagcgccgctggca                                                                                                >  2:1242238‑M2/1‑26 (MQ=255)
                                                                                                                       cgGCCAGGCTTGGAATGGCCGTGAGCAGGCCGATATGGAAGGTGTCGCTGACGCCCGCATCGCGGATGAAGGTCGGCATCCAGAAGCCCATCGCATAGGCGCTGAGCAGGATCGAAAAGTC‑GATA‑CCACCGAGCATCCACACCTTAAGGt                            <  1:345594/150‑1 (MQ=255)
                                                                                                                        ggCCAGGCTTGGAATGGCCGTGAGCAGGCCGATATGGAAGGTGTCGCTGACGCCCGCATCGCGGATGAAGGTCGGCATCCAGAAGCCCATCGCATAGGCGCTGAGCAGGATCGAAAAGTC‑GATa‑c                                                    <  2:407823/125‑1 (MQ=255)
                                                                                                                        ggCCAGGCTTGGAATGGCCGTGAGCAGGCCGATATGGAAGGTGTCGCTGACGCCCGCATCGCGGATGAAGGTCGGCATCCAGAAGCCCATCGCATAGGCGCTGAGCAGGATCGAAAAGTC‑GATa‑c                                                    >  1:407823/1‑125 (MQ=255)
                                                                                                                         gCCAGGCTTGGAATGGCCGTGAGCAGGCCGATATGGAAGGTGTCGCTGACGCCCGCATCGCGGATGAAGGTCGGCATCCAGAAGCCCATCGCATAGGCGCTGAGCAGGATCGAAAAGTC‑GATA‑CCACCGAGCATCCACACCTTAAGGTTg                          <  1:1036270/150‑1 (MQ=255)
                                                                                                                           cAGGCTTGGAATGGCCGTGAGCAGGCCGATATGGAAGGTGTCGCTGACGCCCGCATCGCGGATGAAGGTCGGCATCCAGAAGCCCATCGCATAGGCGCTGAGCAGGAt                                                                    <  2:1889927/108‑1 (MQ=255)
                                                                                                                           cAGGCTTGGAATGGCCGTGAGCAGGCCGATATGGAAGGTGTCGCTGACGCCCGCATCGCGGATGAAGGTCGGCATCCAGAAGCCCATCGCATAGGCGCTGAGCAGGAt                                                                    >  1:1889927/1‑108 (MQ=255)
                                                                                                                           cAGGCTTGGAATGGCCGTGAGCAGGCCGATATGGAAGGTGTCGCTGACGCCCGCATCGCGGATGAAGGTCGGCATCCAGAAGCCCATCGCATAGGCGCTGAGCAGGATCGAAAAGTC‑GATA‑CCACCGAGCATCCACACCTTAAGGTTgaa                        >  2:717286/1‑150 (MQ=255)
                                                                                                                              gCTTGGAATGGCCGTGAGCAGGCCGATATGGAAGGTGTCGCTGACGCCCGCATCGCGGATGAAGGTCGGCATCCAGAAGCCCATCGCATAGGCGCAGAGCAGGATCGAAAAGTC‑GATA‑CCACCGAGCATCCACACCTTAAGGTTgaagaa                     <  1:1867617/150‑1 (MQ=255)
                                                                                                                              gCTTGGAATGGCCGTGAGCAGGCCGATATGGAAGGTGGCGCTGACGCCCGCATCGCGGATGAAGGTCGGCATCCAGAAGCCCATCGCATAGGCGCTGAGCAGGATCGAAAAGTC‑GATA‑CCACCGAGCATCCACACCTTAAGGTTgaagaa                     >  1:1950368/1‑150 (MQ=255)
                                                                                                                                ttGGAATGGCCGTGAGCAGGCCGATATGGAAGGTGTCGCTGACGCCCGCATCGCGGATGAAGGTCGGCATCCAGAAGCCCATCGCATAGGCGCTTAGTTTGTTTAAAGAGAC‑GGCACCCACCAAG‑ATCCACACCTTAAGGTTGAAGAAGc                   <  2:769281/150‑1 (MQ=255)
                                                                                                                                ttGGAATGGCCGTGAGCAGGCCGATATGGAAGGTGTCGCTGACGCCCGCATCGCGGATGAAGGTCGGCATCCAGAAGCCCATCGCATAGGCGCTGAACAAAATAAAAAAGTC‑GATA‑CCACCGAGCATCCACACCTTAAGGTTGAAGAAGc                   <  2:1575106/150‑1 (MQ=255)
                                                                                                                                  ggAATGGCCGTGAGCAGGCCGATATGGAAGGTGTCGCTGACGCCCGCATCGCGGATGAAGGTCGGCATCCAGAAGCCCATCGCATAGGCGCTGAGCAGGATCGAAAAGTC‑GATA‑CCACCGAGCATCCACACCTTAAGGTTGAAGAAGCCa                 >  1:2123188/1‑150 (MQ=255)
                                                                                                                                      tGGCCGTGAGCAGGCCGATATGGAAGGTTTCGCTGACGCCCGCATCGCGGATGAAGGTCGGCATCCAGAAGCCCATCGCATAGGCGCTGAGCAGGATCGAAAAGTC‑GATA‑CCACCGAGCATCCACACCTTAAGGTTGAAGAAGCCATcgc             <  1:1146698/150‑1 (MQ=255)
                                                                                                                                      tGGCCGTGAGCAGGCCGATATGGAAGGTGTCGCTGACGCCCGCATCGCGGATGAAGGTCg                                                                                                         >  1:1509171/1‑60 (MQ=255)
                                                                                                                                      tGGCCGTGAGCAGGCCGATATGGAAGGTGTCGCTGACGCCCGCATCGCGGATGAAGGTCg                                                                                                         <  2:1509171/60‑1 (MQ=255)
                                                                                                                                        gCCGTGAGCAGGCCGATATGGAAGGTGTCGCTGACGCCCGCATCGCGGATGAAGGTCGGCATCCAGAAGCCCATCGCATAGGCGCTGAGCAGGATCGAAAAGTC‑GATA‑CCACCGAGCATCCACACCTTAAGGTTGAAGAAGCCATCGCgg           >  1:724247/1‑150 (MQ=255)
                                                                                                                                          cGTGAGCAGGCCGATATGGAAGGTGTCGCTGACGCCCGCATCGCGGATGAAGGTCGGCATCCAGAAGCCCATCGCATAGGCGCTGAGCAGGATCGAAAAGTC‑GATA‑CCACCGAGCATCCACACCTTAAGGTTGAAGAAGCCATCGCGGaa         <  1:1129808/150‑1 (MQ=255)
                                                                                                                                               gaaGGCCGATATGGAATGTGTCGCTGACGCCCGCATCGCGGATGAAGGTCGGCATCCAGAAGCCCATCGCATAGGCGCTTTTTTTTTTTAATGATACGGCGA‑CCACCGAG‑ATCTACACCTTAAGGTTGAAGAAGCCATCGCGGAAGCtgt    <  2:736210/148‑1 (MQ=255)
                                                                                                                                               gCAGGCCGATATGGAAGGTGTCGCTGACGCCCGCATCGCGGATGAAGGTCGGCATCCAGAAGCCCATCGCATAGGCGCTGAGCAGGATCGAAAAGTC‑GATA‑CCACCGAGCATCCACACCTTAAGGTTGAAGAAGCCATCGCGGAAGCtgt    <  1:717286/150‑1 (MQ=255)
                                                                                                                                                 aGGCCGATATGGAAGGTGTCGCTGACGCCCGCATCGCGGATGAAGGTCGGCATCCAGAAGCCCATCGCATAGGCGCTGAGCAGGATCGAAAAGTC‑GATA‑CCACCGAGCATCCACACCTTAAGGTTGAAGAAGCCATCGCGGAAGCTgtgt  <  1:2263814/150‑1 (MQ=255)
                                                                                                                                                 |                                                                                                                                                       
GCTGAACAAGGTGCTGCTGGCCATGGCGATTGCACCAATGATAAACGGCACGATGATGTGCCAGCGGCGCTCGCGGTGGCGGTCGGAGCTGGCCCCGATCATGAGCATGCCGGCCAGCGCGGCCAGGCTTGGAATGGCCGTGAGCAGGCCGATATGGAAGGTGTCGCTGACGCCCGCATCGCGGATGAAGGTCGGCATCCAGAAGCCCATCGCATAGGCGCTGAGCAGGATCGAAAAGTC‑GATA‑CCACCGAGCATCCACACCTTAAGGTTGAAGAAGCCATCGCGGAAGCTGTGT  >  NC_002947/4443006‑4443300

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.