BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4917157 =	93 (1.050)	7 (0.080)	6/236	NT	7.5%	coding (320/633 nt)	ccmA	cytochrome c biogenesis ABC transporter ATP‑binding protein CcmA
*	?	NC_002947	4917179 =	83 (0.980)	7 (0.080)	6/236	NT	7.5%	coding (298/633 nt)	ccmA	cytochrome c biogenesis ABC transporter ATP‑binding protein CcmA

Only 100 of 105 total aligned reads displayed.

AGCCAGGTGCAGCCGGGCCAGCGCCACACGGCGCTGCTGACCGGCCGACAGGGTATGGCAGGGGACGTCTTCGAAACCGCGCAGGCCGACAGCCTCCAGCGCCGCCCAGATCGCCTCGCGGCTGGCCGGCTGGTGCAGGGCGCACAGCCAGGTGAGATTCTCCTCGGCGGTGAGCAAGTCCTTGATGCCGGCGGCGTGGCCAATCCACAGCAGGGCGCTGGCCAAGGCATGACGCTG‑TTCTGCCAGGGGCTTGCCACCCAGCAGAATCTGCCCGGCCGTCGGCTGCATCAGCCCGGCCA  >  NC_002947/4917030‑4917328

gccgggcagattctgctgggtggcaagcccctggcagaacagcgtcatgccttggccagcgccctgctgtggattggccacgccgccggcatcaaggacttgctcaccgccgaggagaatctcacctGGCTGGTGCAGGGCGCACAGCCa                                                                                                                                                        >  2:2264242‑M1/128‑150 (MQ=255)

  cgggcagattctgctgggtggcaagcccctggcagaacagcgtcatgccttggccagcgccctgctgtggattggccacgccgccggcatcaaggacttgctcaccgccgaggagaatctcacctGGCTGGTGCAGGGCGCACAGCCAgg                                                                                                                                                      >  1:1216116‑M1/126‑150 (MQ=255)

  ccAGGTGCAGCCGGGCCAGCGCCACACGGCGCTGCTGACCGGCCGACAGGGTATGGCAGGGGACGTCTTCGAAACCGCGCAGGCCGACAGCCTCCAGCGCCGCCCAGATCGCCTCGCGGCTGGCCGGCTGGTGCAGGGCGCACAGCCAgg                                                                                                                                                      <  2:1178630/150‑1 (MQ=255)

   gggcagattctgctgggtggcaagcccctggcagaacagcgtcatgccttggccagcgccctgctgtggattggccacgccgccggcatcaaggacttgctcaccgccgaggagaatctcacccGGCTGGTGCAGGGCGCACAGCCAGGt                                                                                                                                                     >  2:794334‑M1/125‑150 (MQ=255)

        gCAGCCGGGCCAGCGCCACACGGCGCTGCTGACCGGCCGACAGGGTATGGCAGGGGACGTCTTCGAAACCGCGCAGGCCGACAGCCTCCAGCGCCGCCCAGATCGCCTCGCGGCTGGCCGGCTGGTGCAGGGCGCACAGCCAGGTGAGAt                                                                                                                                                <  1:385977/150‑1 (MQ=255)

           gCCGGGCCAGCGCCACACGGCGCTGCTGACCGGCCGACAGGGTATGGCAGGGGACGTCTTCGAAACCGCGCAGGCCGACAGCCTCCAGCGCCGCCCAGATCGCCTCGCGGCTGGCCGGCTGGTGCAGGGCGCACAGCCAGGTGAGATtct                                                                                                                                             >  1:1312477/1‑150 (MQ=255)

                  cAGCGCCACACGGCGCTGCTGACCGGCCGACAGGGTATGGCAGGGGACGTCTTCGAAACCGCGCAGGCCGACAGCCTCCAGCGCCGCCCAGATCGCCTCGCGGCTGGCCGGCTGGTGCAGGGCGCACAGCCAGGTGAGATTCTCCTcggc                                                                                                                                      >  2:1578517/1‑150 (MQ=255)

                    gcgcCACACGGCGCTGCTGACCGGCCGACAGGGTATGGCAGGGGACGTCTTCGAAACCGCGCAGGCCGACAGCCTCCAGCGCCGCCCAGATCGCCTCGCGGCTGGCCGGCTGGTGCAGGGCGCACAGCCAGGTGCGATTCTCCTcggcgg                                                                                                                                    >  2:1682380/1‑150 (MQ=255)

                      gcCACACGGCGCTGCTGACCGGCCGACAGGGTATGGCAGGGGACGTCTTCGAAACCGCGCAGGCCGACAGCCTCCAGCGCCGCCCAGATCGCCTCGCGGCTGGCCGGCTGGTGCAGGGCGCACAGCCAGGTGAGATTCTCCTCGGCGGTg                                                                                                                                  <  2:2103951/150‑1 (MQ=255)

                        cacaCGGCGCTGCTGACCGGCCGACAGGGTATGGCAGGGGACGTCTTCGAAACCGCGCAGGCCGACAGCCTCCAGCGCCGCCCAGATCGCCTCGCGGCTGGCCGGCTGGTGCAGGGCGCACAGCCAGGTGAGATTCTCCTCGGCGGTGAg                                                                                                                                >  1:1732789/1‑150 (MQ=255)

                             ggCGCTGCTGACCGGCCGACAGGGTATGGCAGGGGACGTCTTCGAAACCGCGCAGGCCGACAGCCTCCAGCGCCGCCCAGATCGCCTCGCGGCTGGCCGGCTGGTGCAGGGCGCACAGCCAGGTGAGATTCTCCTCGGCGGTGAGCAAGt                                                                                                                           >  2:190247/1‑150 (MQ=255)

                               cgcTGCTGACCGGCCGACAGGGTATGGCAGGGGACGTCTTCGAAACCGCGCAGGCCGACAGCCTCCAGCGCCGCCCAGATCGCCTCGCGGCTGGCCGGCTGGTGCAGGGCGCACAGCCAGGTGAGATTCTCCTCGGCGGTGAGCAAGTcc                                                                                                                         <  2:1186688/150‑1 (MQ=255)

                                 ctgctgACCGGCCGACAGGGTATGGCAGGGGACGTCTTCGAAACCGCGCAGGCCGACAGCCTCCAGCGCCGCCCAGATCGCCTCGCGGCTGGCCGGCTGGTGCAGGGCGCACAGCCAGGTGAGATTCTCCTCGGCGGTGAGCAAGTCCtt                                                                                                                       <  2:892847/150‑1 (MQ=255)

                                  tgctgACCGGCCGACAGGGTATGGCAGGGGACGTCTTCGAAACCGCGCAGGCCGACAGCCTCCAGCGCCGCCCAGATCGCCTCGCGGCTGGCCGGCTGGTGCAGGGCGCACAGCCAGGTGAGATTCTCCTCGGCGGTGAGCAAGTCCTTg                                                                                                                      >  2:2336813/1‑150 (MQ=255)

                                   gctgACCGGCCGACAGGGTATGGCAGGGGACGTCTTCGAAACCGCGCAGCACGAATTTTGCCAGCGCCGCCCAGATCGCCTCGCGGCTGGCCGGCTGGTGCAGGGCGCACAGCCAGGTGAGATTCTCCTCGGCGGTGAGCAAGTCCTTGa                                                                                                                     >  2:1418486/1‑150 (MQ=255)

                                    ctgACCGGCCGACAGGGTATGGCAGGGGACGTCTTCGAAACCGCGCAGGCCGACAGCCTCCAGCGCCGCCCAGATCGCCTCGCGGCTGGCCGGCTGGTGCAGGGCGCACAGCCAGGTGAGATTCTCCTCGGCGGTGAGCAAGTCCTTGAt                                                                                                                    <  1:2336813/150‑1 (MQ=255)

                                         cGGCCGACAGGGTATGGCAGGGGACGTCTTCGAAACCGCGCAGGCCGACAGCCTCCAGCGCCGCCCAGATCGCCTCGCGGCTGGCCGGCTGGTGCAGGGCGCACAGCCAGGTGAGATTCTCCTCGGCGGTGAGCAAGTCCTTGATGCcgg                                                                                                               <  2:1424330/150‑1 (MQ=255)

                                           gCCGACAGGGTATGGCAGGGGACGTCTTCGAAACCGCGCAGGCCGACAGCCTCCAGCGCCGCCCAGATCGCCTCGCGGCTGGCCGGCTGGTGCAGGGCGCACAGCCAGGTGAGATTCTCCTCGGCGGTGAGCAAGTCCTTGATGCcggcg                                                                                                             >  1:2275979/1‑150 (MQ=255)

                                              gACAGGGTATGGCAGGGGACGTCTTCGAAACCGCGCTGGCCGACAGCCTCCAGCGCCGCCCAGATCGCCTCGCGGCTGGCCGGCTGGTGCAGGGCGCACAGCCAGGTGAGATTCTCCTCGGCGGTGAGCAAGTCCTTGATGCCGgcggcg                                                                                                          >  2:921475/1‑150 (MQ=255)

                                                 aGGGTATGGCAGGGGACGTCTTCGAAACCGCGCAGGCCGACAGCCTCCAGCGCCGCCCAGATCGCCTCGCGGCTGGCCGGCTGGTGCAGGGCGCACAGCCAGGTGAGATTCTCCTCGGCGGTGAGCAAGTCCTTGATGCCGGCGGCGTgg                                                                                                       <  1:1121665/150‑1 (MQ=255)

                                                 aGGGTATGGCAGGGGACGTCTTCGAAACCGCGCAGGCCGACAGCCTCCAGCGCCGCCCAGATCGCCTCGCGGCTGGCCGGCTGGTGCAGGGCGCACAGCCAGGTGAGATTCTCCTCGGCGGTGAGCAAGTCCTTGATGCCGGCGGCGTgg                                                                                                       <  1:690507/150‑1 (MQ=255)

                                                 aGGGTATGGCAGGGGACGTCTTCGAAACCGCGCAGGCCGACAGCCTCCAGCGCCGCCCAGATCGCCTCGCGGCTGGCCGGCTGGTGCAGGGCGCACAGCCAGGTGAGATTCTCCTCGGCGGTGAGCAAGTCCTTGATGCCGGCGGCGTgg                                                                                                       >  1:479360/1‑150 (MQ=255)

                                                  cttggccagcgccctgctgttgattggccacgccgccggcatcaaggacttgctcaccgccgaggagaatctcacctGGCTGGTGCAGGGCGCACAGCCAGGTg                                                                                                                                                    <  1:1881553‑M1/27‑1 (MQ=255)

                                                  cttggccagcgccctgctgttgattggccacgccgccggcatcaaggacttgctcaccgccgaggagaatctcacctGGCTGGTGCAGGGCGCACAGCCAGGTg                                                                                                                                                    >  2:1881553‑M1/78‑104 (MQ=255)

                                                   ggTATGGCAGGGGACGTCTTCGAAACCGCGCAGGCCGACAGCCTCCAGCGCCGCCCAGATCGCCTCGCGGCTGGCCGGCTGGTGCAGGGCGCACAGCCAGGTGAGATTCTCCTCGGCGGTGAGCAAGTCCTTGATGCCGGCGGCGTGGcc                                                                                                     >  2:433341/1‑150 (MQ=255)

                                                    gTATGGCAGGGGACGTCTTCGAAACCGCGCAGGCCGACAGCCTCCAGCGCCGCCCAGATCGCCTCGCGGCTGGCCGGCTGGTGCAGGGCGCACAGCCAGGTGAGATTCTCCTCGGCGGTGAGCAAGTCCTTGa                                                                                                                     <  2:130910/133‑1 (MQ=255)

                                                    gTATGGCAGGGGACGTCTTCGAAACCGCGCAGGCCGACAGCCTCCAGCGCCGCCCAGATCGCCTCGCGGCTGGCCGGCTGGTGCAGGGCGCACAGCCAGGTGAGATTCTCCTCGGCGGTGAGCAAGTCCTTGa                                                                                                                     >  1:130910/1‑133 (MQ=255)

                                                       tGGCAGGGGACGTCTTCGAAACCGCGCAGGCCGACAACATCAAGCGCAGCGGGGAGCGCCTCGCGGCTGGCCGGCTGGTGCAGGGCGCACAGCCAGGTGAGATTCTCCTCGGCGGTGAGCAAGTCCTTGATGCCGGCGACGTGGCCAATc                                                                                                 >  1:46887/1‑150 (MQ=255)

                                                         gCAGGGGACGTCTTCGAAACCGCGCAGGCCGACAGCCTCCAGCGCCGCCCAGATCGCCTCGCGGCTGGCCGGCTGGTGCAGGGCGCACAGCCAGGTGAGATTCTCCTCGGCGGTGAGCAAGTCCTTGATGCCGGCGGCGTGGCCAATCca                                                                                               >  1:446230/1‑150 (MQ=255)

                                                            ggggACGTCTTCGAAACCGCGCAGGCCGACAGCCTCCAGCGCCGCCCAGATCGCCTCGCGGCTGGCCGGCTGGTGCAGGGCGCACAGCCAGGTGAGATTCTCCTCGGCGGTGAGCAAGTCCTTGATGCCGGCGGCGTGGCCAATCCAcag                                                                                            <  2:446230/150‑1 (MQ=255)

                                                             gggACGTCTTCGAAACCGCGCAGGCCGACAGCCTCCAGCGCCGCCCAGATCGCCTCGCGGCTGGCCGGCTGGTGCAGGGCGCACAGCCAGGTGAGATTCTCCTCGGCGGTGAGCaa                                                                                                                             >  2:2190384/1‑116 (MQ=255)

                                                             gggACGTCTTCGAAACCGCGCAGGCCGACAGCCTCCAGCGCCGCCCAGATCGCCTCGCGGCTGGCCGGCTGGTGCAGGGCGCACAGCCAGGTGAGATTCTCCTCGGCGGTGAGCaa                                                                                                                             <  1:2190384/116‑1 (MQ=255)

                                                             gggACGTCTTCGAAACCGCGCAGGCCGACAGCCTCCAGCGCCGCCCAGATCGCCTCGCGGCTGGCCGGCTGGTGCAGGGCGCACAGCCAGGTGAGATTCTCCTCGGCGGTGAGCAAGTCCTTGATGCCGGCGGCGTGGCCAATCCAcagc                                                                                           >  1:342227/1‑150 (MQ=255)

                                                              ggACGTCTTCGAAACCGCGCAGGCCGACAGCCTCCAGCGCCGCCCAGATCGCCTCGCGGCTGGCCGGCTGGTGCAGGGCGCACAGCCAGGTGAGATTCTCCTCGGCGGTGAGCAAGTCCTTGATGCCGGCGGCGTGGCCAATCCAcagca                                                                                          >  1:1079909/1‑150 (MQ=255)

                                                               gACGTCTTCGAAACCGCGCAGGCCGACAGCCTCCAGCGCCGCCCAGATCGCCTCGCGGCTGGCCGGCTGGTGCAGGGCGCACAGCCAGGTGAGATTCTCCTCGGCGGTGAGCAAGTCCTTGATGCCGGCGGCGTGGCCAATCCAcagcag                                                                                         >  2:2127593/1‑150 (MQ=255)

                                                                     ttCGAAACCGCGCAGGCCGACAGCCTCCAGCGCCGCCCAGATCGCCTCGCGGCTGGCCGGCTGGTGCAGGGCGCACAGCCAGGTGAGATTCTCCTCGGCGGTGAGCAAGTCCTTGATGCCGGCGGCGTGGCCAATCCACAGCAGGGCGCt                                                                                   >  1:1694890/1‑150 (MQ=255)

                                                                     ttCGAAACCGCGCAGGCCGACAGCCTCCAGCGCCGCCCAGATCGCCTCGCGGCTGGCCGGCTGGTGCAGGGCGCACAGCCAGGTGAGATTCTCCTCGGCGGTGAGCAAGTCCTTGATGCCGGCGGCGTGGCCAATCCACAGCAGGGCGCt                                                                                   >  2:1532895/1‑150 (MQ=255)

                                                                     ttCGAAACCGCGCAGGCCGACAGCCTCCAGCGCCGCCCAGATCGCCTCGCGGCTGGCCGGCTGGTGCAGGGCGCACAGCCAGGTGAGATTCTCCTCGGCGGTGAGCAAGTCCTTGATGCCGGCGGCGTGGCCAATCCACAGCAGGGCGCt                                                                                   >  2:1823145/1‑150 (MQ=255)

                                                                     ttCGAAACCGCGCAGGCCGACAGCCTCCAGCGCCGCCCAGATCGCCTCGCGGCTGGCCGGCTGGTGCAGGGCGCACAGCCAGGTGAGATTCTCCTCGGCGGTGAGCAAGTCCTTGATGCCGGCGGCGTGGCCAATCCACAGCAGGGCGCt                                                                                   <  2:1732789/150‑1 (MQ=255)

                                                                     ttCGAAACCGCGCAGGCCGACAGCC‑CCAGCGCCGCCCAGATCGCCTCGCGGCTGGCCGGCTGGTGCAGGGCGCACAGCCAGGTGAGATTCTCCTCGGCGGTGAGCAAGTCCTTGATGCcg                                                                                                                >  2:1409973/1‑120 (MQ=255)

                                                                     ttCGAAACCGCGCAGGCCGACAGCC‑CCAGCGCCGCCCAGATCGCCTCGCGGCTGGCCGGCTGGTGCAGGGCGCACAGCCAGGTGAGATTCTCCTCGGCGGTGAGCAAGTCCTTGATGCcg                                                                                                                <  1:1409973/120‑1 (MQ=255)

                                                                      tCGAAACCGCGCAGGCCGACAGCCTCCAGCGCCGCCCAGATCGCCTCGCGGCTGGCCGGCTGGTGCAGGGCGCACAGCCAGGTGAGATTCTCCTCGGCGGTGAGCAAGTCCTTGATGCCGGCGGCGTGGCCAATCCACAGCAGGGCGCTg                                                                                  <  2:846869/150‑1 (MQ=255)

                                                                        gAAACCGCGCAGGCCGACAGCCTCCAGCGCCGCCCAGATCGCCTCGCGGCTGGCCGGCTGGTGCAGGGCGCACAGCCAGGTGAGATTCTCCTCGGCGGTGAGCAAGTCCTTGATGCCGGCGGCGTGGCCAATCCACAGCAGGGCGCTGGc                                                                                <  1:565441/150‑1 (MQ=255)

                                                                         aaaCCGCGCAGGCCGACAGCCTCCAGCGCCGCCCAGATCGCCTCGCGGCTGGCCGGCTGGTGCAGGGCGCACAGCCAGGTGAGATTCTCCTCGGCGGTGAGCAAGTCCTTGATGCCGGCGGCGTGGCCAATCCACAGCAGGGCGCTGGcc                                                                               <  1:1532895/150‑1 (MQ=255)

                                                                         aaaCCGCGCAGGCCGACAGCCTCCAGCGCCGCCCAGATCGCCTCGCGGCTGGCCGGCTGGTGCAGGGCGCACAGCCAGGTGAGATTCTCCTCGGCGGTGAGCAAGTCCTTGATGCCGGCGGCGTGGCCAATCCACAGCAGGGCGCTGGcc                                                                               <  2:1523582/150‑1 (MQ=255)

                                                                         aaaCCGCGCAGGCCGACAGCCTCCAGCGCCGCCCAGATCGCCTCGCGGCTGGCCGGCTGGTGCAGGGCGCACAGCCAGGTGAGATTCTCCTCGGCGGTGAGCAAGTCCTTGATGCCGGCGGCGTGGCCAATCCACAGCAGGGCGCTGGcc                                                                               >  2:770205/1‑150 (MQ=255)

                                                                          aaCCGCGCAGGCCGACAGCCTCCAGCGCCGCCCAGATCGCCTCGCGGCTGGCCGGTTGGTGCAGGGCGCACAGCCAGGTGAGATTCTCCTCGGCGGTGAGCAAGTcc                                                                                                                         <  2:1920191/107‑1 (MQ=255)

                                                                          aaCCGCGCAGGCCGACAGCCTCCAGCGCCGCCCAGATCGCCTCGCGGCTGGCCGGCTGGTGCAGGGCGCACAGCCAGGTGAGATTCTCCTCGGCGGTGAGCAAGTCCTTGATGCCGGCGGCGTGGCCAATCCACAGCAGGGCGCTGGCCa                                                                              >  2:2118036/1‑150 (MQ=255)

                                                                           aCCGCGCTGGCCGACAGCCTCCAGCGCCGCCCAGATCGCCTCGCGGCTGGCCGGCTGGTGCAGGGCGCACAGCCAGGTGAGATTCTCCTCGGCGGTGAGCAAGTCCTTGATGCCGGCGGCGTGGCCAATCCACAGCAGGGCGCTGGCCaa                                                                             <  1:921475/150‑1 (MQ=255)

                                                                             cgcgCAGGCCGACAGCCTCCAGCGCCGCCCAGATCGCCTCGCGGCTGGCCGGCTGGTGCAGGGCGCACAGCCAGGTGAGATTCTCCTCGGCGGTGAGCAAg                                                                                                                            <  1:931951/101‑1 (MQ=255)

                                                                             cgcgCAGGCCGACAGCCTCCAGCGCCGCCCAGATCGCCTCGCGGCTGGCCGGCTGGTGCAGGGCGCACAGCCAGGTGAGATTCTCCTCGGCGGTGAGCAAg                                                                                                                            >  2:931951/1‑101 (MQ=255)

                                                                             cgcgCAGGCCGACAGCCTCCAGCGCCGCCCAGATCGCCTCGCGGCTGGCCGGCTGGTGCAGGGCGCACAGCCAGGTGAGATTCTCCTCGGCGGTGAGCAAGTCCTTGATGCCGGCGGCGTGGCCAATCCACAGCAGGGCGCTGGCCAAgg                                                                           <  1:1823145/150‑1 (MQ=255)

                                                                              cacgccgccggcatcaaggacttgctcaccgccgaggagaatctcacctGGCTGGTGCAGGGCGCACAGCCAGGt                                                                                                                                                     >  1:903078‑M1/50‑75 (MQ=255)

                                                                              cacgccgccggcatcaaggacttgctcaccgccgaggagaatctcacctGGCTGGTGCAGGGCGCACAGCCAGGt                                                                                                                                                     <  2:903078‑M1/26‑1 (MQ=255)

                                                                                gcAGGACGACAGCCTCCAGCGCCGGCCAGATCGCCTAGCGGCTGGCTGTCTGTTGCGGGGCGAGCAGCCAGGTGGCATTCTCCTCGGCGGTGAGCAAGTCCTTGATGCCGGTGGCGTGGCCAATCTACCGCAGGGCGCTGGCCAAGGCAt                                                                        <  2:72971/150‑1 (MQ=255)

                                                                                   ggCCGACAGCCTCCAGCGCCGCCCAGATCGCCTCGCGGCTGGCCGGCTGGTGCAGGGCGCACAGCCAGGTGAGATTCTCCTCGGCGGTGAGCAAGTCCTTGATGCCGGCGGCGTGGCCAATCCACAGCAGGGCGCTGGCCAAGGCATGAc                                                                     <  2:1875003/150‑1 (MQ=255)

                                                                                      cGACAGCCTCCAGCGCCGCCCAGATCGCCTCGCGGCTGGCCGGCTGGTGCAGGGCGCACAGCCAGGTga                                                                                                                                                   >  2:445291/1‑69 (MQ=255)

                                                                                      cGACAGCCTCCAGCGCCGCCCAGATCGCCTCGCGGCTGGCCGGCTGGTGCAGGGCGCACAGCCAGGTga                                                                                                                                                   <  1:445291/69‑1 (MQ=255)

                                                                                      cGACAGCCTCCAGCGCCGCCCAGATCGCCTCGCGGCTGGCCGGCTGGTGCAGGGCGCACAGCCAGGTGAGATTCTCCTCGGCGGTGAGCAAGTCCTTGATGCCGGCGGCGTGGCCAATCCACAGCAGGGCGCTGGCCAAGGCATGACGCt                                                                  >  1:1959261/1‑150 (MQ=255)

                                                                                      cGACAGCCTCCAGCGCCGCCCAGATCGCCTCGCGGCTGGCCGGCTGGTGCAGGGCGCACAGCCAGGTGAGATTCTCCTCGGCGGTGAGCAAGTCCTTGATGCCGGCGGCGTGGCCAATCCACAGCAGGGCGCTGGCCAAGGCATGACGCt                                                                  >  2:784958/1‑150 (MQ=255)

                                                                                        aCAGCCTCCAGCGCCGCCCAGATCGCCTCGCGGCTGGCCGGCTGGTGCAGGGCGCACAGCCAGGTGAGATTCTCCTCGGCGGTGAGCAAGTCCTTGATGCCGGCGGCGTGGCCAATCCACAGCAgg                                                                                        >  1:899743/1‑126 (MQ=255)

                                                                                        aCAGCCTCCAGCGCCGCCCAGATCGCCTCGCGGCTGGCCGGCTGGTGCAGGGCGCACAGCCAGGTGAGATTCTCCTCGGCGGTGAGCAAGTCCTTGATGCCGGCGGCGTGGCCAATCCACAGCAgg                                                                                        <  2:899743/126‑1 (MQ=255)

                                                                                             cTCCAGCGCCGCCCAGATCGCCTCGCGGCTGGCCGGCTGGTGCAGGGCGCACAGCCAGGTGAGATTCTCCTCGGCGGTGAGCAAGACCTTGATGCTGCGGGGGTGGCCAATCCACAGCAGGGCGCTGGCCAAGGCATGACGCTG‑TTCTGc                                                          <  1:47647/150‑1 (MQ=255)

                                                                                                cAGCGCCGCCCAGATCGCCTCGCGGCTGGCCGGCTGGTGCAGGGCGCACAGCCAGGTGAGATTCTCCTCGGCGGTGAGCAAGTCCTTGATGCCGGCGGCGTGGCCAATCCACAGCAGGGCGCTGGCCAAGGCATGACGCTG‑TTCTGCCAg                                                       <  2:479360/150‑1 (MQ=255)

                                                                                                 aGCGCCGCCCAGATCGCCTCGCGGCTGGCCGGCTGGTGCAGGGCGCACAGCCAGGTGAGATTCTCCTCGGCGGTGAGCAAGTCCTTGATGCCGGCGGCGTGGCCAATCCACAGCAGGGCGCTGGCCAAGGCATGACGCTG‑TTCTGCCAgg                                                      <  1:1169879/150‑1 (MQ=255)

                                                                                                   cgccgcCCAGATCGCCTCGCGGCTGGCCGGCTGGTGCAGGGCGCACAGCCAGGTGAGATTCTCCTCGGCGGTGAGCAAGTCCTTGATGCCGGCGGCGTGGCCAATCCACAGCAGGGCGCTGGCCAAGGCATGACGCTG‑TTCTGCCAgggg                                                    <  1:264286/150‑1 (MQ=255)

                                                                                                       gccCAGATCGCCTCGCGGCTGGCCGGCTGGTGCAGGGCGCACAGCCAGGTGAGATTCTCCTCGGCGGTGAGCAAGTCCTTGATGCCGGCCGAGTGGCCAATCCACAGCAGGGCGCTGGCCAAGGCATGACGCTG‑TTCTGCCAGGGGCTTg                                                <  1:1500787/150‑1 (MQ=255)

                                                                                                       gccCAGATCGCCTCGCGGCTGGCCGGCTGGGGCAGGGCGCACAGCCAGGTGAGATTCTCCTCGGCGGTGAGCAAGTCCTTGATGCCGGCGGCGTGGCCAATCCACAGCAGGGCGCTGGCCAAGGCATGACGCTG‑TTCTGCCAGGGGCTTg                                                >  2:210758/1‑150 (MQ=255)

                                                                                                           aGATCGCCTCGCGGCTGGCCGGCTGGTGCAGGGCGCACAGCCAGGTGAGATTCTCCTCGGCGGTGa                                                                                                                                 <  1:1564455/66‑1 (MQ=255)

                                                                                                                 ccTCGCGGCTGGCCGGCTGGTGCAGGGCGCACAGCCAGGTGAGATTCTCCTCGGCGGTGAGCAAGTCCTTGATGCCGGCGGCGTGGCCAATCCACAGCAGGGCGCTGGCCAAGGCATGACGCTG‑TTCTGCCAGGGGCTTGCCACCcagca                                      <  2:556613/150‑1 (MQ=255)

                                                                                                                  cTCGCGGCTGGCCGGCTGGTGCAGGGCGCACAGCCAGGTGAGATTCTCCTCGGCGGTGAGCAAGTCCTTGATGCCGGCGGCGTGGCCAATCCACAGCAGGGCGCTGGCCAAGGCATGACGCTG‑TTCTGCCAGGGGCTTGCCACCcagcag                                     >  2:815574/1‑150 (MQ=255)

                                                                                                                   tCGCGGCTGGCCGGCTGGTGCAGGGCGCACAGCCAGGTGAGATTCTCCTCGGCGGTGAGCAAGTCCtt                                                                                                                       >  2:2258806/1‑68 (MQ=255)

                                                                                                                   tCGCGGCTGGCCGGCTGGTGCAGGGCGCACAGCCAGGTGAGATTCTCCTCGGCGGTGAGCAAGTCCtt                                                                                                                       <  1:2258806/68‑1 (MQ=255)

                                                                                                                   tCGCGGCTGGCCGGCTGGTGCAGGGCGCACAGCCAGGTGAGATTCTCCTCGGCGGTGAGCAAGTCCTTGATGCCGGCGGCGTGGCCAATCCACAGCAGGGCGCTGGCCAAGGCATGACGCTG‑TTCTGCCAGGGGCTTGCCACCCAGCAGa                                    <  2:1079909/150‑1 (MQ=255)

                                                                                                                    gcgatcTGGGCGGCTGGTGCAGGGCGCACAGCCAGGTGAGATTCTCCTCGGCGGTGAGCAAGTCCTTGATGCCGGCGGCGTGGCCAATCCACAGCAGGGCGCTGGCCAAGGCATGACGCTG‑TTCTGCCAGGGGCTTGCCACCCAGCAGaa                                   <  2:2102096/145‑1 (MQ=255)

                                                                                                                    cgcgGCTGGCCGGCTGGTGCAGGGCGCACAGCCAGGTGAGATTCTCCTCGGCGGTGAGCAAGTCCTTGATGCCGGCGGCGTGGCCAATCCACAGCAGGGCGCTGGCCAAGGCATGACGCTG‑TTCTGCCAGGGGCTTGCCACCCAGCAGaa                                   <  2:2275979/150‑1 (MQ=255)

                                                                                                                     gcgGCTGGCCGGCTGGTGCAGGGCGCACAGCCAGGTGAGATTCTCCTCGGCGGTGAGCAAGTCCTTGATGCCGGCGGCGTGGCCAATCCACAGCAGGGCGCTg                                                                                  <  1:1098339/103‑1 (MQ=255)

                                                                                                                     gcgGCTGGCCGGCTGGTGCAGGGCGCACAGCCAGGTGAGATTCTCCTCGGCGGTGAGCAAGTCCTTGATGCCGGCGGCGTGGCCAATCCACAGCAGGGCGCTg                                                                                  >  2:1098339/1‑103 (MQ=255)

                                                                                                                       ggCTGGCCGGCTGGTGCAGGGCGCACAGCCAGGTGAGATTCTCCTCGGCGGTGAGCAAGTCCTTGATGCCGGCGGCGTGGCCAATCCACAGCAGGGCGCTGGCCAAGGCATGACGCTG‑TTCTGCCAGGGGCTTGCCACCCAGCAGAATCt                                >  1:2200588/1‑150 (MQ=255)

                                                                                                                        gCTGGCCGGCTGGTGCAGGGCGCACAGCCAGGTGAGATTCTCCTCGGCGGTGAGCAAGTCCTTGATGCCGGCGGCGTGGCCAATCCACAGCAGGGCGCTGGCCAAGGCATGACGCTG‑TTCTGCCAGGGGCTTGCCACCCAGCAGAATCTg                               >  2:1329543/1‑150 (MQ=255)

                                                                                                                          cacctggctgtgcgccctgcaccagccAGGTGAGATTCTCCTCGGCGGTGAGCAAGTCCTTGATGCCGGCGGCGTGGCCAATCAACAGCAGGGCGCTGGCCAAg                                                                            >  2:1881553‑M2/28‑104 (MQ=255)

                                                                                                                          cacctggctgtgcgccctgcaccagccAGGTGAGATTCTCCTCGGCGGTGAGCAAGTCCTTGATGCCGGCGGCGTGGCCAATCAACAGCAGGGCGCTGGCCAAg                                                                            <  1:1881553‑M2/77‑1 (MQ=255)

                                                                                                                           acctggctgtgcgccctgcaccagccGGGTGAGATTCTCCTCGGCGGTGAGCAAGTCCTTGATGCCGGCGGCGTGGCCAATCCACAGCAGGGCGCTGGCCAAGGCATGACGCTG‑TTCTGCCAGGGGCTTGCCACCCAGCAGAATCTGccc                            >  2:794334‑M2/27‑150 (MQ=255)

                                                                                                                           acctggctgtgcgccctgcaccagccAGGTGAGATTCTCCTCGGCGGTGAGCAAGTCCTTGATGCCGGCGGCGTg                                                                                                        <  2:903078‑M2/49‑1 (MQ=255)

                                                                                                                           acctggctgtgcgccctgcaccagccAGGTGAGATTCTCCTCGGCGGTGAGCAAGTCCTTGATGCCGGCGGCGTg                                                                                                        >  1:903078‑M2/27‑75 (MQ=255)

                                                                                                                            gCCGGCTGGTGCAGGGCGCACAGCCAGGTGAGATTCTCCTCGGCGGTGAGCAAGTCCTTGATGCCGGCGGCGTGGCCACTCCACAGCAGGGCGCTGGCCAAGGCATGACGCTG‑TTCTGCCAGGGGCTTGCCACCCAGCAGAATCTGCCCg                           <  1:1974098/150‑1 (MQ=255)

                                                                                                                            cctggctgtgcgccctgcaccagccAGGTGAGATTCTCCTCGGCGGTGAGCAAGTCCTTGATGCCGGCGGCGTGGCCAATCCACAGCAGGGCGCTGGCCAAGGCATGACGCTG‑TTCTGCCAGGGGCTTGCCACCCAGCAGAATCTGCCCg                           >  1:1216116‑M2/26‑150 (MQ=255)

                                                                                                                             ccGGCTGGTGCAGGGCGCACAGCCAGGTGAGATTCTCCTCGGCGGTGAGCAAGTCCTTGATGCCGGCGGCGTGGCCAATCCACAGCAGGGCGCTGGCCAAGGCATGACGCTG‑TTCTGCCAGGGGCTTGCCACCcagc                                       >  2:1263905/1‑137 (MQ=255)

                                                                                                                             ccGGCTGGTGCAGGGCGCACAGCCAGGTGAGATTCTCCTCGGCGGTGAGCAAGTCCTTGATGCCGGCGGCGTGGCCAATCCACAGCAGGGCGCTGGCCAAGGCATGACGCTG‑TTCTGCCAGGGGCTTGCCACCcagc                                       <  1:1263905/137‑1 (MQ=255)

                                                                                                                              tggctgtgcgccctgcaccagccAGGTGAGATTCTCCTCGGCGGTGAGCAAGTCCTTGATGCCGGCGGCGTGGCCAATCCACAGCAGGGCGCTGGCCAAGGCATGACGCTG‑TTCTGCCAGGGGCTTGCCACCCAGCAGAATCTGCCCGGc                         >  2:2264242‑M2/24‑150 (MQ=255)

                                                                                                                              cGGCTGGTGCAGGGCGCACAGCCAGGTGAGATTCTCCTCGGCGGt                                                                                                                                   <  2:1036403/45‑1 (MQ=255)

                                                                                                                              cGGCTGGTGCAGGGCGCACAGCCAGGTGAGATTCTCCTCGGCGGt                                                                                                                                   >  1:1036403/1‑45 (MQ=255)

                                                                                                                                  TGGTGCAGGGCGCACAGCCAGGTGAGATTCTCCTCGGCGGTGAGCAAGTCCTTGATGCCGGCGGCGTGGCCAATCCAAACTCGAGCGCTGGCCAAGGCATGACGCTG‑TTCTGCCAGGGGCTTGCCACCCAGCAGAATCTGCCCGGCCGTc                     <  1:654882‑M1/150‑1 (MQ=255)

                                                                                                                                      gCAGGGCGCACAGCCAGGTGAGATTCTCCTCGGCGGTGAGCAAGTCCTTGATGCCGGCGGCGTGGCCAATCCACAGCAGGGCGCTGGCCAAGGCATGACGCTG‑TTCTGCCAGGGGCTTGCCACCCAGCAGAATCTGCCCGGCCGTCGGCt                 <  1:2127593/150‑1 (MQ=255)

                                                                                                                                        aGGGCGCACAGCCAGGTGAGATTCTCCTCGGCGGTGAGCAAGTCATAGATTCCTGCGGCGTGGCCAATCCACAGCAGGGCGCTGGCCAAGGCATGACGCTG‑TTCTGCCAGGGGCTTGCCACCCAGCAGAATCTGCCCGGCCGTCGGCTGc               >  2:945728/1‑150 (MQ=255)

                                                                                                                                             gcACAGCCAGGTGAGATTCTCCTCGGCGGTGAGCAAGTCCTTGATGCCGGCGGCGTGGCCAATCCACAGCAGGGCGCTGGCCAAGGCATGACGCTG‑TTCTGCCAGGGGCTTGCCACCCAGCAGAATCTGCCCGGCCGTCGGCTGCATCAg          >  1:889010/1‑150 (MQ=255)

                                                                                                                                               acaGCCAGGTGAGATTCTCCTCGGCGGTGAGCAAGTCCTTGATGCCGGCGGCGTGGCCAATCCACAGCAGGGCGCTGGCCAAGGCATGACGCTG‑TTCTGCCAGGGGCTTGCCACCCAGCAGAATCTGCCCGGCCGTCGGCTGCATCAGcc        >  2:1100718/1‑150 (MQ=255)

                                                                                                                                                   ccAGGTGAGATTCTCCTCGGCGGTGAGCAAGTCCTTGATGCCGGCGGCGTGGCCAATCCACAGCAGGGCGCTGGCCAAGGCATGACGCTG‑TTCTGCCAGGGGCTTGCCACCCAGCAGAATCTGCCCGGCCGTCGGCTGCATCAGCCCGGc    >  1:1303649‑M2/3‑150 (MQ=255)

                                                                                                                                                   ccAGGTGAGATTCTCCTCGGCGGTGAGCAAGTCCTTGATGCCGGCGGCGTGGCCAATCCACAGCAGGGCGCTGGCCAAGGCATGACGCTG‑TTCTGCCAGGGGCTTGCCACCCAGCAGAATCTGCCCGGCCGTCGGCTGCATCAGCCCGGc    <  2:894126‑M2/148‑1 (MQ=255)

                                                                                                                                                     aGGTGAGATTCTCCTCGGCGGTGAGAAAGTCCTTGATGCCGTCGGCGGGTCCAATTCACAGCAGGGCGGTGGACCAGGCA‑CAGAATGCCACCTCGAGTGGCTTGCCACCCAGCAGAATCTGCCCGGCCGTCGGCTGCATCAGCCCGGCca  >  1:550585/1‑150 (MQ=255)

AGCCAGGTGCAGCCGGGCCAGCGCCACACGGCGCTGCTGACCGGCCGACAGGGTATGGCAGGGGACGTCTTCGAAACCGCGCAGGCCGACAGCCTCCAGCGCCGCCCAGATCGCCTCGCGGCTGGCCGGCTGGTGCAGGGCGCACAGCCAGGTGAGATTCTCCTCGGCGGTGAGCAAGTCCTTGATGCCGGCGGCGTGGCCAATCCACAGCAGGGCGCTGGCCAAGGCATGACGCTG‑TTCTGCCAGGGGCTTGCCACCCAGCAGAATCTGCCCGGCCGTCGGCTGCATCAGCCCGGCCA  >  NC_002947/4917030‑4917328

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.