New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5099995 =	57 (0.640)	7 (0.100)	6/196	NT	13.8%	intergenic (+33/+120)	PP_4488/phhR	hypothetical protein/sigma‑54 dependent transcriptional regulator
	?	NC_002947	5100077 =	42 (0.600)					intergenic (+115/+38)	PP_4488/phhR	hypothetical protein/sigma‑54 dependent transcriptional regulator

CGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAACTTGTTGGCAATTGTCGTGTGCGAAACACCCAGTCTTTTGCCCAAGGCCCGACTACTGGGAAACTCCCCC  >  NC_002947/5099930‑5100220                                                                                                                                                     |                                                                                                                                                cgcgTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAg                                                                                                                                               <  2:977278/150‑1 (MQ=255)  gcgTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAgg                                                                                                                                              >  2:568097/1‑150 (MQ=255)          gggAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGcgtt                                                                                                                                      <  2:1463285/150‑4 (MQ=255)             aaCGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCa                                                                                                                                   <  1:1992131/150‑1 (MQ=255)                   tgctCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCa                                                                                                                             >  1:744075/1‑150 (MQ=255)                    gctCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAg                                                                                                                            <  2:405736/150‑1 (MQ=255)                        cAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAATCCCAGGTTc                                                                                                                        >  2:1404180/1‑150 (MQ=255)                        cAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAAAAAACTCCCACAGATCA‑CCGTTGCTTCTATGTCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTc                                                                                                                        >  1:1497784/1‑150 (MQ=255)                         aaCGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCt                                                                                                                       >  1:556064/1‑150 (MQ=255)                         aaCGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCATATCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGAATGCAAAGCAGTCGCAGGTTCt                                                                                                                       >  2:1044212/1‑150 (MQ=255)                           cGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGTGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCttt                                                                                                                     <  1:2262985/150‑1 (MQ=255)                           cGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCATATCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCCAGGGTAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCttt                                                                                                                     <  1:1044212/150‑1 (MQ=255)                             gCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGATGCTAAAGGACTGCAACGCAGTCCCAGGTTCTTTGa                                                                                                                   <  1:572267/150‑1 (MQ=255)                              cTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGAc                                                                                                                  <  2:827692/150‑1 (MQ=255)                              cTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGAc                                                                                                                  <  1:568097/150‑1 (MQ=255)                              cTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGAc                                                                                                                  <  1:1084342/150‑1 (MQ=255)                              cTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGAc                                                                                                                  <  2:1571193/150‑1 (MQ=255)                              cTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGAc                                                                                                                  <  1:1448257/150‑1 (MQ=255)                               tGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGAcc                                                                                                                 >  1:1086851/1‑150 (MQ=255)                                  tACCTTGGAAGCGGGGGCCCGGCGCGCCCATATCGCGACACAAGGCCGCTCCTACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTTTGGGAGCGGCCTTGTGTTGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACcaac                                                                                                              <  1:199518/150‑1 (MQ=38)                                          aaTCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATc                                                                                                      >  2:1293869/1‑150 (MQ=255)                                               ggggCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCt                                                                                                                       <  2:2348476/128‑1 (MQ=255)                                               ggggCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCt                                                                                                                       >  1:2348476/1‑128 (MQ=255)                                               ggggCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCC‑CAGCCCGAGCACAGCGAATTAGCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCACGGTCTTTGACCAACAACTAATccgccg                                                                                                 >  1:1926002/1‑150 (MQ=38)                                                 ggCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGAc                                                                                                                  <  2:30385/131‑1 (MQ=255)                                                 ggCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGAc                                                                                                                  >  1:30385/1‑131 (MQ=255)                                                    ccTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGAc                                                                                                                                            >  1:2140205/1‑102 (MQ=255)                                                    ccTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGAc                                                                                                                                            <  2:2140205/102‑1 (MQ=255)                                                    ccTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTg                                                                                            <  2:1497784/150‑1 (MQ=255)                                                     cTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGt                                                                                           <  2:1274255/150‑1 (MQ=255)                                                          ggCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGc                                                                                      >  1:82292/1‑150 (MQ=255)                                                            ctccTATCGCGACACAAGGTCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGa                                                                                    <  2:899607/148‑1 (MQ=255)                                                                tATCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCttt                                                                                                                     >  1:329792/1‑113 (MQ=255)                                                                tATCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCttt                                                                                                                     <  2:329792/113‑1 (MQ=255)                                                                tATCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTaa                                                                                >  2:52321/1‑150 (MQ=255)                                                                  TCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACcaacaa                                                                                                            <  2:1477910‑M1/120‑1 (MQ=255)                                                                  TCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACcaacaa                                                                                                            >  1:1477910‑M1/1‑120 (MQ=255)                                                                    GCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATccc                                                                            <  1:466727‑M1/150‑1 (MQ=255)                                                                      GACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTc                                                                          <  2:2121390‑M1/150‑1 (MQ=255)                                                                      GACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTc                                                                          <  2:1364818‑M1/150‑1 (MQ=255)                                                                         ACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAAc                                                                       <  1:2367240‑M1/150‑1 (MQ=255)                                                                           AAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAACtt                                                                     <  2:554803‑M1/150‑1 (MQ=255)                                                                            aaggccgctcccacaggtaatacgctgtgctctggctgagcgcattatctgtgggagcggccttgtgtcgcgaAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAACtt                                                                     >  2:2085362‑M2/74‑150 (MQ=255)                                                                             GGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAACttgt                                                                   <  2:276575‑M1/150‑1 (MQ=255)                                                                              gaCGCTCCGACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAACttgtt                                                                  <  1:477439‑M1/148‑1 (MQ=255)                                                                              GCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCttt                                                                                                                     >  1:1041182‑M1/1‑99 (MQ=255)                                                                              GCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCttt                                                                                                                     <  2:1041182‑M1/99‑1 (MQ=255)                                                                              GCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAACttgtt                                                                  >  2:655611‑M1/1‑150 (MQ=255)                                                                                 GCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAACTTGTTGGc                                                               <  1:135815‑M1/150‑1 (MQ=255)                                                                                 GCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAACTTGTTGGc                                                               <  2:923069‑M1/150‑1 (MQ=255)                                                                                  gctcccacaggtaatacgctgtgctctggctgagcgcattatctgtgggagcggccttgtgtcgcgaAAGGACTGCAACGCAGTCCCAGGTTCttt                                                                                                                     >  2:75009‑M2/68‑96 (MQ=255)                                                                                  gctcccacaggtaatacgctgtgctctggctgagcgcattatctgtgggagcggccttgtgtcgcgaAAGGACTGCAACGCAGTCCCAGGTTCttt                                                                                                                     <  1:75009‑M2/29‑1 (MQ=255)                                                                                       ACAGATAATGCGCT‑CAGCCAGAGCACAGCGTCTTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAACTTGTTGGCAATTGt                                                         <  1:804139‑M1/150‑1 (MQ=255)                                                                                       ACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGc                                                                                      >  2:1051626‑M1/1‑121 (MQ=255)                                                                                       ACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGc                                                                                      <  1:1051626‑M1/121‑1 (MQ=255)                                                                                       ACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGc                                                                                      <  1:1089522‑M1/121‑1 (MQ=255)                                                                                       ACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGc                                                                                      >  2:1089522‑M1/1‑121 (MQ=255)                                                                                       ACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAACTTGTTGGCCATTGt                                                         <  1:2212501‑M1/150‑1 (MQ=255)                                                                                         AGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAACTTGTTGGCAATTGTCg                                                       <  2:1490567‑M1/150‑1 (MQ=255)                                                                                           aTAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAACTTGTTGGCAATTGTCgtg                                                     <  1:2121390/150‑1 (MQ=255)                                                                                            gtaatacgctgtgctctggctgagcgcattatctgtgggagcggccttgtgtcgcgaAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGa                                                                                                <  1:202202‑M2/50‑1 (MQ=255)                                                                                            gtaatacgctgtgctctggctgagcgcattatctgtgggagcggccttgtgtcgcgaAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGa                                                                                                >  2:202202‑M2/58‑107 (MQ=255)                                                                                            gtaatacgctgtgctctggctgagcgcattatctgtgggagcggccttgtgtcgcgaAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAACTTGTTGGCAATTGTCgtg                                                     >  2:1777346‑M2/58‑150 (MQ=255)                                                                                                  gcT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAACTTGTTGGCAATTGTCGTGTGCGaaa                                              >  1:645632/1‑150 (MQ=255)                                                                                                    t‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAACttgttg                                                                 >  1:682055/1‑129 (MQ=255)                                                                                                    t‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAACttgttg                                                                 <  1:1506062/129‑1 (MQ=255)                                                                                                    t‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAACttgttg                                                                 >  2:1506062/1‑129 (MQ=255)                                                                                                    t‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAACttgttg                                                                 <  2:682055/129‑1 (MQ=255)                                                                                                       aGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAATCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAACTTGTTGGCAATTGTCGTGTGCGAAACAcc                                          <  1:1404180/150‑1 (MQ=255)                                                                                                         ccAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAACTTGTTGGCAATTGTCGTGTGCGAAACACCCa                                        <  1:52321/150‑1 (MQ=255)                                                                                                               ctgagcgcattatctgtgggagcggccttgtgtcgcgaAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAACTTGTTGGCAATTGTCGTGTGCGAAACACCCAGTCttt                                  <  1:2085362‑M2/112‑1 (MQ=255)                                                                                                                    cGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAACTTGTTGGCAATTGTCGTGTGCGAAACACCCAGTCTTTTGccc                             >  1:1821269/1‑150 (MQ=255)                                                                                                                             tgtgggagcggccttgtgtcgcgaAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAACTTGTTGGCAATTGTCGTGTGCGAAACACCCAGTCTTTTGcccaagggacga                    <  2:645632‑M2/126‑6 (MQ=255)                                                                                                                                   agcggtcttgtgtcgcgaAAGGACTGCAACGCAGTCCCATGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGTGAGTAATCCCTCAACTTGTTGGCAATTGTCGTGTGCGAAACACCCAGTCTTTTGTCCAAGGCCCGACTACTg              <  2:143055‑M2/132‑1 (MQ=255)                                                                                                                                   agcggccttgtgtcgcgaAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAACTTGTTGGCAATTGTCGTGTGCGAAACACCCAGTCTTTTGCCCAAGGCCCGACTACTg              <  2:135815‑M2/132‑1 (MQ=255)                                                                                                                                    gcggccttgtgtcgcgaAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAACTTGTTGGCAATTGTCGTGTGCGAAACACCCAGTCTTTTGCCCAAGGCCCGACTACTgg             <  1:923069‑M2/133‑1 (MQ=255)                                                                                                                                       gccttgtgtcgcgaAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAACTTGTTGTCAATTGTCGTGTGCGAAACACCCAGTCTTTTGCCCAAGGCCCGACTACTGGGaa          >  1:874794‑M2/15‑150 (MQ=255)                                                                                                                                        ccttgtgtcgcgaAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAACTTGTTGGCAATTGTCGTGTGCGAAACACCCAGTCTTTTGCCCAAGGCCCGACTACTGGGaaa         >  2:2054001‑M2/14‑150 (MQ=255)                                                                                                                                        ccttgtgtcgcgaAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAACTTGTTGGCAATTGTCGTGTGCGAAACACCCAGTCTTTTGCCCAAGGCCCGACTACTGGGaaa         <  1:1777346‑M2/137‑1 (MQ=255)                                                                                                                                         cttgtgtcgcgaAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAACttgt                                                                   <  1:1567309‑M2/79‑1 (MQ=255)                                                                                                                                         cttgtgtcgcgaAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAACttgt                                                                   >  2:1567309‑M2/13‑91 (MQ=255)                                                                                                                                           tgtgtcgcgaAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAACTTGTTGGCAATTGTCGTGTGCGAAACACCCAGTCTTTTGCCCAAGGCCCGACTACTGGGAAACTc      <  2:556064‑M2/140‑1 (MQ=255)                                                                                                                                            gtgtcgcgaAAGGACTGCAACGCAGT‑CCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAACTTGTTGGCAATTGTCGTGTGCGAAACACCCAGTCTTTTGCCCAAGGCCCGACTACTGGGAAACTccc    >  1:1196304‑M2/10‑150 (MQ=255)                                                                                                                                               tcgcgaAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAACTTGTTGGCAATTGTCGTGTGCGAAACACCCAGTCTTTTGCCCAAGGCCCGACTACTGGGAAACTccccc  >  1:202908‑M2/7‑150 (MQ=255)                                                                                                                                                     |                                                                                                                                                CGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAACTTGTTGGCAATTGTCGTGTGCGAAACACCCAGTCTTTTGCCCAAGGCCCGACTACTGGGAAACTCCCCC  >  NC_002947/5099930‑5100220

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.