New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5160427 =101 (1.140)6 (0.070) 6/230 NT 6.2% coding (676/1212 nt) PP_4543 hypothetical protein
?NC_002947 5160466 = 87 (1.050)coding (637/1212 nt) PP_4543 hypothetical protein

Only 100 of 120 total aligned reads displayed.

GACGCACCGCATAGGTGTTGGCATAGCATAGAAAGACGAAATCCCACTGTGCCTCGTCCAGTTCATCACCGCGGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCTCGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCAGCCCAGGCGTTCCATCCACCCAGGCAGGCCCGCCAACTGCGCGTCCAGCGCCGGGTCGGTGAAGTTGATGTGCGCTCCGGAAAGCCCAC  >  NC_002947/5160319‑5160615
                                                                                                                                                   |                                                                                                                                                     
tggacgcgcagttggcgggcctgcctgggtggatggaacgcctgggctgccagtttcactggcaaaaccgggggtatcgcgacttccaggactttctcgacagcctctGCTCGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGa                                                                                                                                                     >  1:1938566‑M1/109‑150 (MQ=255)
gacgCACCGCATAGGTGTTGGCATAGCATAGAAAGACGAAATCCCACTGTGCCTCGTCCAGTTCATCACCGCGGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCTCGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGa                                                                                                                                                     >  1:1737088/1‑150 (MQ=255)
  cgCACCGCATAGGTGTTGGCATAGCATAGAAAGACGAAATCCCACTGTGCCTCGTCCAGTTCATCACCGCGGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCTCGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAgg                                                                                                                                                   <  1:1562825/150‑1 (MQ=255)
   gCACCGCATAGGTGTTGGCATAGCATAGAAAGACGAAATCCCACTGTGCCTCGTCCAGTTCATCACCGCGGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCTCGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGc                                                                                                                                                  <  2:315677/150‑1 (MQ=255)
   gCACCGCATAGGTGTTGGCATAGCATAGAAAGACGAAATCCCACTGTGCCTCGTCCAGTTCATCACCGCGGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCTCGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGc                                                                                                                                                  >  1:1679317/1‑150 (MQ=255)
    cACCGCATAGGTGTTGGCATCGCATAGAAAGACGAAATCCCACTGTGCCTCGTCCAGTTCATCACCGCAGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCTCGCGCTCCTTGCGCATCCGCTTGCGCTTGCGCGAGATgcgcct                                                                                                                                                 >  2:870269/1‑145 (MQ=255)
         cATAGGTGTTGGCATAGCATAGAAAGACGAAATCCCACTGTGCCTCGTCCAGTTCATCACCGCGGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCTCGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGATGCTGTCga                                                                                                                                            <  1:934012/150‑1 (MQ=255)
          aTAGGTGTTGGCATAACATAGAAAGACGAAATCCCACTGTGCCTCGTCCAGTTCATCACCGCGGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCTCGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCgag                                                                                                                                           <  2:1679591/150‑1 (MQ=255)
             ggTGTTGGCATAGCATAGAAAGACGAAATCCCACTGTGCCTCGTCCAGTTCATCACCGCGGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCTCGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGaaa                                                                                                                                        <  2:1846522/150‑1 (MQ=255)
                   ggCATAGCATAGAAAGACGAAATCCCACTGTGCCTCGTCCAGTTCATCACCGCGGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCTCGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTg                                                                                                                                  <  1:530106/150‑1 (MQ=255)
                   ctgcctgggtggatggaacgcctggggtgccagtttcactggcaaaaccgggggtatcgcgacttccaggactttctcgacagccacctGCTCGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAACGTCCTg                                                                                                                                  >  2:883346‑M1/90‑150 (MQ=255)
                       tagcatagAAAGACGAAATCCCACTGTGCCTCGTCCAGTTCATCACCGCGGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCTCGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAg                                                                                                                              >  1:855385/1‑150 (MQ=255)
                       tagcatagAAAGACGAAATCCCACTGTGCCTCGTCCAGTTCATCACCGCGGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCTCGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAg                                                                                                                              >  2:815437/1‑150 (MQ=255)
                          catagAAAGACGAAATCCCACTGTGCCTCGTCCAGTTCATCACCGCGGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCTCGCGCTCCTCGGGGAACACCCGACACGTGCGCTAGCTGAGGCTGTCGAGAAAGTCCTGGAAGtag                                                                                                                           >  2:2202356/1‑148 (MQ=255)
                           atagAAAGACGAAATCCCACTGTGCCTCGTCCAGTTCATCACCGCGGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCTCGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTc                                                                                                                                     <  1:1559827/139‑1 (MQ=255)
                           atagAAAGACGAAATCCCACTGTGCCTCGTCCAGTTCATCACCGCGGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCTCGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTc                                                                                                                                     >  2:1559827/1‑139 (MQ=255)
                                aaGAGGAAAGCCCACTGTGCCTCGACCAGTTCCTCACCGCCGTACCAGCGGAAGTCGATACCCCGCCCCGCCGGCTGCGCGCGCTCCTTGCGCATCTGCTTGCGCTTGCCCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATAc                                                                                                                     <  1:291371/150‑1 (MQ=255)
                                 aGACGAAATCCCACTGTGCCTCGTCCAGTTCGTCACCGCGGTACCAGCGGAAGTGGATACCCTGCCCCGCCACCTGCTCGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATAcc                                                                                                                    >  1:740672/1‑150 (MQ=255)
                                 aGACGAAATCCCACTGTGCCTCGTCCAGTTCATCACCGCGGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCTCGCGCTCCTTGTGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATAcc                                                                                                                    >  2:1906398/1‑150 (MQ=255)
                                     gAAATCCCACTGTGCCTCGTCCAGTTCATCACCGCGGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCTCGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACTCCCg                                                                                                                >  1:410535/1‑150 (MQ=255)
                                          cccACTGTGCCTCGTCCAGTTCATCACCGCGGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCTCGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGtttt                                                                                                           <  1:2202356/150‑1 (MQ=255)
                                          cccACCGTGCTTCGTCCAGTTCCTCTCCGTTGCACCAGCGGGAGTGAATACCCTGCCCCGCCCCCTGCCTGCGCTCCTGTCGCTTCTGCTTGCGCGTGCGCGAGCCGGGGCTGTCGAGACAGTCCTTTAAGTCGCGATACCCCCGGtttt                                                                                                           <  2:864845/150‑1 (MQ=255)
                                           ccACTGTGCCTCGTCCAGTTCATCACCGCGGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCTCGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGaa                                                                                                                                         >  1:1102035/1‑119 (MQ=255)
                                              cTGTGCCTCGTCCAGTTCAGTACCGCGGTACCAGCGGAAGTCTATACCCTGCTCCGCCACCTGCTCGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGACCTCAGGCTGTCGGCAAAGGCCTGGAAGTCGCGATACCCCCGGTTTTGCCa                                                                                                       <  2:1178654/150‑1 (MQ=255)
                                                 ccagtttcacttgcaaaaccgggggtatcgcgacttccaggactttctcgacagcctcaGCTCGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAg                                                                                                                                                    <  1:1183418‑M1/43‑1 (MQ=255)
                                                 ccagtttcactggcaaaaccgggggtatcgcgacttccaggactttctcgacagcctcaGCTCGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAg                                                                                                                                                    >  2:1183418‑M1/60‑102 (MQ=255)
                                                     tCGTCCAGTTCATCACCGCGGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCTCGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAAc                                                                                                >  2:435026/1‑150 (MQ=255)
                                                     tCGTCCAGTTCATCACCGCGGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCTCGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAAc                                                                                                >  1:496690/1‑150 (MQ=255)
                                                       gTCCAGTTAATCACCGCGGTACCAGCGGAAGTCGATACAATGCCCCGCCACCTGCCCGCGCTCCTTGCGCATCTGCTGGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTg                                                                                              <  1:870269/150‑1 (MQ=255)
                                                         ccAGTTCATCACCGCGGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCTCGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGc                                                                                            >  1:1921415/1‑150 (MQ=255)
                                                          cAGTTCATCACCGCGGTACTAGCGGAAGTCGATACCCTGCCCCGCCACCTGCTCGCGCTCCTTGGGCATCTGCTTGCGCTTGCGCGAGATGAGGCTGTCGAGAAAGTCCTGGAAGTCGGGATACCCCCGGTTTTGTCAGTGAAACTGGCa                                                                                           <  2:405883/150‑1 (MQ=255)
                                                          cAGTTCATCACCGCGGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCTCGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCa                                                                                           <  1:1638973/150‑1 (MQ=255)
                                                           aGTTCATCACCGCGGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCTCGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGAt                                                                                                                       <  2:2164636/121‑1 (MQ=255)
                                                           aGTTCATCACCGCGGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCTCGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGAt                                                                                                                       >  1:2164636/1‑121 (MQ=255)
                                                            gTTCATCACCGCGGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCTCGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCAGc                                                                                         >  1:30750/1‑150 (MQ=255)
                                                                atcaCCGCGGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCTCGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCAGCCCAg                                                                                     <  1:815437/150‑1 (MQ=255)
                                                                 tcaCCGCGGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCTCGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAAATGGCAGCCCAgg                                                                                    >  2:1018811/1‑150 (MQ=255)
                                                                   aCCGTGGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCTCGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTGTGCCAGTGAAACTGGCAGCCCAGGCg                                                                                  >  2:2324607/1‑150 (MQ=255)
                                                                   aCCGCGGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCTCGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCAGCCCAGGCg                                                                                  >  1:142137/1‑150 (MQ=255)
                                                                   aCCGCGGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCTCGCGCGCCTTGCGCATCAGCTTGCGCTTGCGCGAGCTGTAGCTGTCGAGAATGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCAGCCCAGGCg                                                                                  >  1:550244/1‑150 (MQ=255)
                                                                    ccGCGGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCTCGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCAGCCCAGGCGt                                                                                 <  2:496690/150‑1 (MQ=255)
                                                                         tctccAGCGGAAGTCGATACCCTGCCCCGCCACCTGCTCGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCAGCCCAGGCGTtccat                                                                            <  2:1863153/147‑1 (MQ=255)
                                                                             cAGCGGAAGTCGATACCCTGCCCCGCCACCTTCGCGCGCGCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCAGCCCAGGCGTtccatcaga                                                                        >  1:1863153/1‑147 (MQ=255)
                                                                             cAGCGGAAGTCGATACCCTGCCCCGCCACCTGCTCGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTcgcg                                                                                                                         >  1:1628905/1‑101 (MQ=255)
                                                                             cAGCGGAAGTCGATACCCTGCCCCGCCACCTGCTCGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCAGCCCAGGCGTTCCATCCAc                                                                        >  1:2379444/1‑150 (MQ=255)
                                                                              aGCGGAAGTCGATACCCTGCCCCGCCACCTGCTCGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAgg                                                                                                                                                   >  1:440462/1‑74 (MQ=255)
                                                                              aGCGGAAGTCGATACCCTGCCCCGCCACCTGCTCGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAgg                                                                                                                                                   <  2:440462/74‑1 (MQ=255)
                                                                              aGCGGAAGTCGATACCCTGCCCCGCCACCTGCTCGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCAGCCCAGGCGTTCCATCCAcc                                                                       >  1:298115/1‑150 (MQ=255)
                                                                              aGCGGAAGTCGATACCCTGCCCCGCCACCTGCTCGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCAGCCCAGGCGTTCCATCCAcc                                                                       >  1:1428836/1‑150 (MQ=255)
                                                                                 ggAAGTCGATACCCTGCCCCACCACCTGCTCGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCAGCCCAGGCGTTCCATCCACCcag                                                                    <  2:1159684/150‑1 (MQ=255)
                                                                                  gAAGTCGATACCCTGCCCCGCCACCTGCTCGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCAGCCCAGGCGTTCCATCCAcc                                                                       >  1:590527/1‑146 (MQ=255)
                                                                                  gAAGTCGATACCCTGCCCCGCCACCTGCTCGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCAGCCCAGGCGTTCCATCCAcc                                                                       <  2:590527/146‑1 (MQ=255)
                                                                                  gAAGTCGATACCCTGCCCCGCCACCTGCTCGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCAGCCCAGGCGTTCCATCCACCcagg                                                                   >  2:1929673/1‑150 (MQ=255)
                                                                                   aaGTCGATACCCTGCCCCGCCACCTGCTCGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCAGCCCAGGCGTTCCATCCACCcaggc                                                                  <  1:2268071/150‑1 (MQ=255)
                                                                                     caggacgttctcgacagcctcagctcgcgcaagcgcaagcagatgcgcaaggagcgcgagcaGGTGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCACCCCAGGCGTTCCATCCACCcaggcag                                                                >  2:883346‑M2/63‑150 (MQ=255)
                                                                                        gATACCCTGCCCCGCCACCCGCTCGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTg                                                                                                    >  2:2030443/1‑111 (MQ=255)
                                                                                        gATACCCTGCCCCGCCACCCGCTCGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTg                                                                                                    <  1:2030443/111‑1 (MQ=255)
                                                                                           aCCCTGCCCCGCCACCTGCTCGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCAGCCCAGGCGTTCCATCCACCCAGGCAGGCCCGc                                                          <  1:2144908/150‑1 (MQ=255)
                                                                                             ccTGCCCCGCCACCTGCTCGCGCTCCTTGCGCATCTGCTTGCTCTTGCGCGAGCTGa                                                                                                                                                     <  1:152540/57‑1 (MQ=255)
                                                                                             ccTGCCCCGCCACCTGCTCGCGCTCCTTGCGCATCTGCTTGCTCTTGCGCGAGCTGa                                                                                                                                                     >  2:152540/1‑57 (MQ=255)
                                                                                             ccTGCCCCGCCACCTGCTCGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCAGCCCAGGCGTTCCATCCACCCAGGCAGGCCCGCCa                                                        >  2:1963497/1‑150 (MQ=255)
                                                                                               tGCCCCGCCACCTGCTCGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCa                                                                                           >  1:684572/1‑113 (MQ=255)
                                                                                               tGCCCCGCCACCTGCTCGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCa                                                                                           <  2:684572/113‑1 (MQ=255)
                                                                                                gCCCCGCCACCTGCTCGCGCTCCTTGCGCATCTACTTCCTCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCAGCCCAGGCGTTCCATCCACCCAGGCAGGCCCGCCAACt                                                     <  1:1140763/150‑1 (MQ=255)
                                                                                                 ccccGCCACCTGCTCGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCAGCCCAGGCGTTCCATCCACCCAGGCAGGCCCGCCAACTg                                                    >  2:1580285/1‑150 (MQ=255)
                                                                                                  cccGCCACCTGCTCGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCTGCCCAGGCGTTCCATCCACCCAGGCAGGCCCGCCAACTgc                                                   >  1:1834130/1‑150 (MQ=255)
                                                                                                  cccGCCACCTGCTCGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCAGCCCAGGCGTTCCATCCACCCAGGCAGGCCCGCCAACTgc                                                   <  2:1679317/150‑1 (MQ=255)
                                                                                                   ccGCCACCTGCTCGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCAGCCCAGGCGTTCCATCCACCCAGGCAGGCCCGCCaccgtcg                                                  >  1:359116/1‑144 (MQ=255)
                                                                                                    cGCCACCTGCTCGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCAGCCCAGGCGTTCCATCCACCCAGGCAGGCCCGCCAACTgcgc                                                 >  1:2373541/1‑150 (MQ=255)
                                                                                                        ctcagctcgcgcaagcgcaagcagatgcgcaaggagcgcgagcTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTgg                                                                                             >  2:1183418‑M2/44‑102 (MQ=255)
                                                                                                        ctcagctcgcgcaagcgcaagcagatgcgcaaggagcgcgagcTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCAAGTGAAACTgg                                                                                             <  1:1183418‑M2/59‑1 (MQ=255)
                                                                                                        aCCTGCTCGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCa                                                                                                       <  2:1801939/92‑1 (MQ=255)
                                                                                                        aCCTGCTCGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCa                                                                                                       >  1:1801939/1‑92 (MQ=255)
                                                                                                        aCCTGCTCGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCAGCCCAGGCGTtccatc                                                                           <  2:1963092/120‑1 (MQ=255)
                                                                                                        aCCTGCTCGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCAGCCCAGGCGTtccatc                                                                           >  1:1963092/1‑120 (MQ=255)
                                                                                                         tcagctcgcgcaagcgcaagcagatgcgcaaggagcgcgagcAGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCAGCCCAGGCGTTCCATCCACCCAGGCAGGCCCGCCAACTGCGCGTCCa                                            >  1:1938566‑M2/43‑150 (MQ=255)
                                                                                                         ccTGCTCGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCAGCCCAGGCGTTCCATCCACCCAGGCAGGCCCGCCAACTGCGCGTCCa                                            <  2:30750/150‑1 (MQ=255)
                                                                                                             ctcgcgcaagcgcaagcagatgcgcaaggagcgcgagcTGAGGCTGCCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCAGCCCAGGCGTTCCATCCACCCAGGCAGGCCCGCCAACTGCGCGTCCAgcgc                                        >  1:2265806‑M2/39‑150 (MQ=255)
                                                                                                             CTCGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCAGCCCAGGCGTTCCATCCACCCAGGCAGGCCCGCCAACTGCGCGTCCAgcgc                                        <  1:1560140‑M1/150‑1 (MQ=255)
                                                                                                              TCGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCAGCCCAGGCGTTCCATCCACCCAGGCAGGCCCGCCAACTGCGCGTCCAGCGcc                                       <  1:2059539‑M1/150‑1 (MQ=255)
                                                                                                                GCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCAGCCCAGGCGTTCCATCCACCCAGGCAGGCCCGCCAACTGCGCGTCCAGCGCCgg                                     <  2:970859‑M1/150‑1 (MQ=255)
                                                                                                                GCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCAGCCCAGGCGTTCCATCCACCCAGGCAGGCCCGCCAACTGCGCGTCCAGCGCCgg                                     >  1:437984‑M1/1‑150 (MQ=255)
                                                                                                                     ccTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCAGCCCAGGCGTTCCATCCACCCAGGCAGGCCCGCCAACTGCGCGTCCAGCGCCGGGTCgg                                <  2:2379444/150‑1 (MQ=255)
                                                                                                                      cTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCGCCGGTTTTGCCAGTGAAACTGGCAGCCCAGGCGTTCCATCCACCCAGGCAGGCCCGCCAACTGCTCGTCCAGCGCCGGGTCGGt                               >  1:1930990/1‑150 (MQ=255)
                                                                                                                      cTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCAGCCCAGGCGTTCCATCCACCCAGGCAGGCCCGCCAACTGCGCGTCCAGCGCCGGGTCGGt                               >  1:1567519/1‑150 (MQ=255)
                                                                                                                         gcgcATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCAGCCCAGGCGTTCCATCCACCCAGGCAGGCCCGCCAACTGCGCGTCCAGCGCCGGGTCGGTGaa                            <  2:298115/150‑1 (MQ=255)
                                                                                                                              tCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCAGCCCAGGCGTTCCATCCACCCAGGCAGGCCCGCCAACTGCGCGTCCAGCGCCGGGTCGGTGAAGTTGa                       <  2:137659/150‑1 (MQ=255)
                                                                                                                                  cttgcgcttgcgCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCAGCCCAGGCGTTCCATCCACCCAGGCAGGCCCGCCAACTGCGCGTCCAGCGCCgg                                     >  1:662799/1‑132 (MQ=255)
                                                                                                                                  cttgcgcttgcgCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCAGCCCAGGCGTTCCATCCACCCAGGCAGGCCCGCCAACTGCGCGTCCAGCGCCgg                                     <  2:662799/132‑1 (MQ=255)
                                                                                                                                  cttgcgcttgcgCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCAGCCCAGGCGTTCCATCCACCCAGGCAGGCCCGCCAACTGCGCGTCCAGCGCCGGGTCGGTGAAGTTGAtgtg                   <  1:604612/150‑1 (MQ=255)
                                                                                                                                  cttgcgcttgcgCGAGCTGAGGCTGTCGAGAAAGTCATGGAAGTCGCGAGACCCCCGGTTTTGCCAGTGAATCTGGCAGCATACCCGTCCCATCCACCCAGGCAGGCCCGCCAACTGCGCGTCCAGCGCCGGGTCGGTTAAGTTGAtgtg                   >  1:2349682/1‑150 (MQ=255)
                                                                                                                                     gcgcttgcgcGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCCATACCCCCGGTTTTGCCAGTGAAACTGGCAGCCCAGGCGATCCATCCACCCAGGCAGGCCCGCCAACTGCGCGTCCAGCGCCGGGTCGGTGAAGTTGATGTgcgc                <  2:1737088/150‑1 (MQ=255)
                                                                                                                                       gcttgcgcGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCAGCCCAGGCGTTCCATCCACCCAGGCAGGCCCGCCAACTGCGCGTCCAGCGCCGGGTCGGTGAAGTTGAt                      >  2:2205878/1‑142 (MQ=255)
                                                                                                                                        cttgcgcGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTCTGCGGGCTACACCCAGAGGCCAGGCCTTCCATCCACCCAGGCAGGACCCCTCACTGCTTGTCCTTCGCCGTGTCGGTGAAGTTGATGTGCGCTcc             <  1:1151396/150‑1 (MQ=255)
                                                                                                                                          tgcgcGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCAGCCCAGGCGTTCCATCCACCCAGGCAGGCCCGCCAACTGCGCGTCCAGCGCCGGGTCGGTGAAGTTGATGTGCGCTCCgg           <  2:1560140/150‑1 (MQ=255)
                                                                                                                                             gcgagcTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCAGCCCAGGCGTTCCATCCACCCAGGCAGGCCCGCCAAATGCGCGTCCAGCGCCGGGTCGGTGAAGTTGATGTGCGCTCCGGaaa        >  1:1718704‑M2/7‑150 (MQ=255)
                                                                                                                                               gagcTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCAGCCCAGGCGTTCCATCCACCCAGGCAGGCCCGCCAACTGCGCGTCCAGCGCCGGGTCGGTGAAGTTGATGTGCGCTCCGGAAAGc      >  2:824353‑M2/5‑150 (MQ=255)
                                                                                                                                               gagcTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCAGCCCAGGCGTTCCATCCACCCAGGCAGGCCCGCCAACTGCGCGTCCAGCGCCGGGTCGGTGAAGTTGATGTGCGCTCCGGAAAGc      <  2:1567519‑M2/146‑1 (MQ=255)
                                                                                                                                               gagcTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCAGCCCAGGCGTTCCATCCACCCAGGCAGGCCCGCCAACTGCGCGTCCAGCGCCGGGTCGGTGAAGTTGATGCGCGCTCCGGAAAGc      <  2:2059539‑M2/146‑1 (MQ=255)
                                                                                                                                                   tGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTCTGCCAGTGAAACTGGCAGCCCAGGCGTTCCATCCACCCAGGCAGGCCCGCCAACTGCGCGTCCAGCGCCGGGTCGGTGAAGTTGATGTGCGCTCCGGAAAGCCCAc  >  2:467988/1‑150 (MQ=255)
                                                                                                                                                   |                                                                                                                                                     
GACGCACCGCATAGGTGTTGGCATAGCATAGAAAGACGAAATCCCACTGTGCCTCGTCCAGTTCATCACCGCGGTACCAGCGGAAGTCGATACCCTGCCCCGCCACCTGCTCGCGCTCCTTGCGCATCTGCTTGCGCTTGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCAGCCCAGGCGTTCCATCCACCCAGGCAGGCCCGCCAACTGCGCGTCCAGCGCCGGGTCGGTGAAGTTGATGTGCGCTCCGGAAAGCCCAC  >  NC_002947/5160319‑5160615

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.