New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 523758789 (1.010)16 (0.200) 13/222 NT 15.8% intergenic (+22/‑2) PP_5700/PP_4614 hypothetical protein/hypothetical protein
?NC_002947 = 5237592 90 (1.130)coding (4/387 nt) PP_4614 hypothetical protein

Only 100 of 120 total aligned reads displayed.

AGTTCGCTGGACCAGGCAGTCGACGGTGCCGCCACCAAGCTCAATCACGCGCTGGAGCACTTCTACGGCAAGCTGCGCAGCAAGCGCGGCGCCTTGGAACTGAGTGACCCGGACGCCTGATCGGCA‑ATGC‑AAAACGCCCGGC‑CTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAACATGCGAACGTCCGGTCAACCTCTGCATCACTCACCGCAGAAGCAAGACCATGAACAACCCATTCGAACGAATCAGTGCTGCATTCGCCCCCGAATACCGGGTG  >  NC_002947/5237446‑5237738
                                                                                                                                                     |                                                                                                                                                  
aGTTCGCTGGACCAGGCAGTCGACGGTGCCGCCACCAAGCTCAATCACGCGCTGGAGCACTTCTACGGCAAGCTGCGCAGCAAGCGCGGCGCCTTGGAACTGAGTGACCCCGGCGCCTTATCGGCA‑ATGC‑AAAACGCCCGGC‑CTTGAgcc                                                                                                                                                 >  2:2082953‑M2/1‑147 (MQ=255)
    cGCTGGACCAGGCAGTCGACGGTGCCGCCACCAAGCTCAATCACGCGCTGGAGCACTTCTACGGCAAGCTGCGCAGCAAGCGCGGCGCCTTGGAACTGAGTGACCCGGACGCCTGATCGGCACAAACGAAAACGCCCGGC‑CTTGAgccgg                                                                                                                                               >  2:2171067‑M2/1‑145 (MQ=255)
    cGCTGGACCAGGCAGTCGACGGTGCCGCCACCAAGCTCAATCACGCGCTGGAGCACTTCTACGGCAAGCTGCGCAGCAAGCGCGGCGCCTTGGAACTGAGTGACCCGGACGCCTGATCGGCA‑ATGC‑AAAACGCCCGGC‑CTTGAgccgggc                                                                                                                                             >  1:401621‑M2/1‑143 (MQ=255)
     gCTGGACCAGGCAGTCGACGGTGCCGCCACCAAGCTCAATCACGCGCTGGAGCACTTCTACGGCAAGCTGCGCAGCAAGCGCGGCGCCTTGGAACTGAGTGACCCGGACGCCTGATCGGCA‑ATGC‑AAAACGCCCGGC‑CTTGAgccgggcg                                                                                                                                            <  1:1862621‑M2/150‑9 (MQ=255)
      cTGGACCAGGCAGTCGACGGTGCCGCCACCAAGCTCAATCACGCGCTGGAGCACTTCTACGGCAAGCTGCGCAGCAAGCGCGGCGCCTTGGAACTGAGTAACCCGGACGCCTGATCGGCA‑ATGC‑AAAACGCCCGGC‑CTTGAgccgggcgt                                                                                                                                           >  1:1641021‑M2/1‑141 (MQ=255)
          aCCAGGCAGTCGACGGTGCCGCCACCAAGCTCAATCACGCGCTGGAGCACTTCTACGGCAAGCTGCGCAGCAAGCGCGGCGCCTTGGAACTGAGTGACCCGGACGCCTGATCGGCA‑ATGC‑AAAACGCCCGGC‑TCAAGgccgggcgttttg                                                                                                                                       <  2:2252847‑M2/150‑14 (MQ=255)
              ggCAGTCGACGGTGCCGCCACCAAGCTCAATCACGCGCTGGAGCACTTCTACGGCAAGCTGCGCAGCAAGCGCGGCGCCTTGGAACTGAGTGACCCGGACGCCTGATCGGCA‑ATGC‑AAAACGCCCGGC‑CTTGAGCCGGGCGTTTTCGttt                                                                                                                                   >  2:2048841/1‑150 (MQ=255)
               gCAGTCGACGGTGCCGCCACCAAGCTCAATCACGCGCTGGAGCACTTCTACGGCAAGCTGCGCAGCAAGCGCGGCGCCTTGGAACTGAGTGACCCGGACGCTTGATCGGCA‑ATGC‑AAAACGCCCGGC‑CTTGAGCCGGGCGTTtttgtttg                                                                                                                                  >  1:1728392/1‑150 (MQ=255)
               gCAGTCGACGGTGCCGCCACCAAGCTCAATCACGCGCTGGAGCACTTCTACGGCAAGCTGCGCAGCAAGCGCGGCGCCTTGGAACTGAGTGACCCGGACGCCTGATCGGCA‑ATGC‑AAAACGCCCGGC‑CTTGAGCCGGGCGTTTTCGTTtg                                                                                                                                  >  2:852594/1‑150 (MQ=255)
                cAGTCGACGGTGCCGCCACCAAGCTCAATCACGCGCTGGAGCACTTCTACGGCAAGCTGCGCAGCAAGCGCGGCGCCTTGGAACTGAGTGACCCGGACGCCTGATCGGCA‑ATGC‑AAAACGCCCGGCTCAAGccgggcgttttgcattgc                                                                                                                                   >  1:2252847‑M2/1‑132 (MQ=255)
                  gTCGACGGTGCCGCCACCAAGCTCAATCACGCGCTGGAGCACTTCTACGGCAAGCTGCGCAGCAAGCGCGGCGCCTTGGAACTGAGTGACCCGGACGCCTGATCGGCA‑ATGC‑AAAACGCCCGGC‑CTTGAGCCGGGCGTTTTCGTTTGTGc                                                                                                                               <  1:1410323/150‑1 (MQ=255)
                     gACGGTGCCGCCACCAAGCTCAATCACGCGCTGGAGCACTTCTACGGCAAGCTGCGCAGCAAGGGCGCTCTTTTGGAACTGAGTGACCCGGACGCCTGATCGGCA‑ATGC‑AAAACGCCCGGC‑CTTGAGCCGGGCGTTTTCGTTTGTGCCGa                                                                                                                            <  2:1282023/150‑1 (MQ=255)
                      aCGGTGCCGCCACCAAGCTCAATCACGCGCTGGAGCACTTCTACGGCAAGCTGCGCAGCAAGCGCGGCGCCTTGGAACTGAGTGACCCGGACGCCTGATCGGCA‑ATGC‑AAAACGCCCGGC‑CTTGAGCCGGGCGTTTTCGTTTGTGCCGAt                                                                                                                           <  1:1670661/150‑1 (MQ=255)
                          tGCCGCCACCAAGCTCAATCACGCGCTGGAGCACTTCTACGGCAAGCTGCGCAGCAAGCGCGGCGCCTTGGAACTGAGTGACCCGGACGCCTGATCGGCA‑ATGC‑AAAACGCCCGGC‑CTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAAt                                                                                                                       <  1:252510/150‑1 (MQ=255)
                          tGCCGCCACCAAGCTCAATCACGCGCTGGAGCACTTCTACGGCAAGCTGCGCAGCAAGCGCGGCGCCTTGGAACTGAGTGACCCGGACGCCTGATCGGCA‑ATGC‑AAAACGCCCGGC‑CTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAAt                                                                                                                       <  1:1737445/150‑1 (MQ=255)
                           gccgccACCAAGCTCAATCACGCGCTGGAGCACTTCTACGGCAAGCTGCGCAGCAAGCGCGGCGCCTTGGAACTGAGTGACCCGGACGCCTGATCGGCA‑ATGC‑AAAACGCCCGGC‑CTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATg                                                                                                                      >  1:2215904/1‑150 (MQ=255)
                            ccgccACCAAGCTCAATCACGCGCTGGAGCACTTCTACGGCAAGCTGCGCAGCAAGCGCGGCGCCTTGGAACTGAGTGACCCGGACGCCTGATCGGCA‑ATGC‑AAAACGCCCGGC‑CTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATgg                                                                                                                     <  2:1862621/150‑1 (MQ=255)
                                 accaAGCTCAATCACGCGCTGGAGCACTTCTACGGCAAGCTGCACAGCAAGCGCGGCGCCTTGGAACTGAGTGACCCGGACGCCTGATCGGCA‑ATGC‑AAAACGCCCGGC‑CTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTg                                                                                                                >  1:1861386/1‑150 (MQ=255)
                                      gCTCAATCACGCGCTGGAGCACTTCTACGGCAAGCTGCGCAGCAAGCGCGGCGCCTTGGAACTGAGTGACCCGGACGCCTGATCGGCA‑ATGC‑AAAACGCCCGGC‑CTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCa                                                                                                           >  1:631650/1‑150 (MQ=255)
                                       cTCAATCACGCGCTGGAGCACTTCTACGGCAAGCTGCGCAGCAAGCGCGGCGCCTTGGAACTGAGTGACCCGGACGCCTGATCGGCA‑ATGC‑AAAACGCCCGGC‑CTTGa                                                                                                                                                    <  2:1687559/108‑1 (MQ=255)
                                        tCAATCACGCGCTGGAGCACTTCTACGGCAAGCTGCGCAGCAAGCGCGGCGCCTTGGAACTGAGTGACCCGGACGCCTGATCGGCA‑ATGC‑AAAACGCCCGGC‑CTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAAc                                                                                                         <  2:724042/150‑1 (MQ=255)
                                        tCAATCACGCGCTGGAGCACTTCTACGGCAAGCTGCGCAGCAAGCGCGGCGCCTTGGAACTGAGTGACCCGGACGCCTGATCGGCA‑ATGC‑AAAACGCCCGGC‑CTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAAc                                                                                                         <  1:1694698/150‑1 (MQ=255)
                                          gaTCACGCGCTGGAGCACTTCTACGGCAAGCTGCGCAGCAAGCGCGGCGCCTTGGAACTGAGTGACCCGGACGCCTGATCGGCA‑ATGC‑AAAACGCCCGGC‑CTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAACAt                                                                                                       >  2:1655448/2‑150 (MQ=255)
                                          aaTCACGCGCTGGAGCACTTCTACGGCAAGCTGCGCAGCAAGCGCGGCGCCTTGGAACTGAGTGACCCGGACGCCTGATCGGCA‑ATGC‑AAAACGCCCGGC‑CTTGAGCCGGGCGTTTTCGTTtgt                                                                                                                                 >  1:507661/1‑124 (MQ=255)
                                          aaTCACGCGCTGGAGCACTTCTACGGCAAGCTGCGCAGCAAGCGCGGCGCCTTGGAACTGAGTGACCCGGACGCCTGATCGGCA‑ATGC‑AAAACGCCCGGC‑CTTGAGCCGGGCGTTTTCGTTTGTGc                                                                                                                               <  1:1312248/126‑1 (MQ=255)
                                          aaTCACGCGCTGGAGCACTTCTACGGCAAGCTGCGCAGCAAGCGCGGCGCCTTGGAACTGAGTGACCCGGACGCCTGATCGGCA‑ATGC‑AAAACGCCCGGC‑CTTGAGCCGGGCGTTTTCGTTTGTGc                                                                                                                               >  2:1312248/1‑126 (MQ=255)
                                          aaTCACGCGCTGGAGCACTTCTACGGCAAGCTGCGCAGCAAGCGCGGCGCCTTGGAACTGAGTGACCCGGACGCCTGATCGGCA‑ATGC‑AAAACGCCCGGC‑CTTGAGCCGGGCGTTTTCGTTTGTGCCg                                                                                                                             <  1:1127507/128‑1 (MQ=255)
                                          aaTCACGCGCTGGAGCACTTCTACGGCAAGCTGCGCAGCAAGCGCGGCGCCTTGGAACTGAGTGACCCGGACGCCTGATCGGCA‑ATGC‑AAAACGCCCGGC‑CTTGAGCCGGGCGTTTTCGTTTGTGCCg                                                                                                                             >  2:1127507/1‑128 (MQ=255)
                                          aaTCACGCGCTGGAGCACTTCTACGGCAAGCTGCGCAGCAAGCGCGGCGCCTTGGAACTGAGTGACCCGGACGCCTGATCGGCA‑ATGC‑AAAACGCCCGGC‑CTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAACAt                                                                                                       <  2:1142624/150‑1 (MQ=255)
                                                gcgcTGGAGCACTTCTACGGCAAGCTGCGCAGCAAGCGCGGCGCCTTGGAACTGAGTGACCCGGACGCCTGATCGGCA‑ATGC‑AAAACGCCCGGC‑CTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAACATGCGAAc                                                                                                 >  2:2149135/1‑150 (MQ=255)
                                                gcgcTGGAGCACTTCTACGGCAAGCTGCGCAGCAAGCGCGGCGCCTTGGAACTGAGTGACCCGGACGCCTGATCGGCA‑ATGC‑AAAACGCCCGGC‑CTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAACATGCGAAc                                                                                                 <  1:1335652/150‑1 (MQ=255)
                                                gcgcTGGAGCACTTCTACGGCAAGCTGCGCAGCAAGCGCGGCGCCTTGGAACTGAGTGACCCGGACGCCTGATCGGCA‑ATGC‑AAAACGCCCGGC‑CTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAACATGCGAAc                                                                                                 <  2:2154925/150‑1 (MQ=255)
                                                gcgcTGGAGCACTTCTACGGCAAGCTGCGCAGCAAGCGCGGCGCCTTGGAACTGAGTGACCCGGACGCCTGATCGGCA‑ATGC‑AAAACGCCCGGC‑CTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAACATGCGAAc                                                                                                 <  2:473529/150‑1 (MQ=255)
                                                    tGGAGCACTTCTACGGCAAGCTGCGCAGCAAGCGCGGCGCCTTGGAACTGAGTGACCCGGACGCCTGATCGGCA‑ATGC‑AAAACGCCCGGC‑CTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGaa                                                                                                              <  1:2039698/133‑1 (MQ=255)
                                                      gAGCACTTCTACGGCAAGCTGCGCAGCAAGCGCGGCGCCTTGGAACTGAGTGACCCGGACGCCTGATCGGCA‑ATGC‑AAAACGCCCGGC‑CTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAACATGCGAACGTCCgg                                                                                           <  1:2149135/150‑1 (MQ=255)
                                                         cACTTCTACGGCAAGCTGCGCAGCAAGCGCGGCGCCTTGGAACTGAGTGACCCGGACGCCTGATCGGCA‑ATGC‑AAAACGCCCGGC‑CTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAACATGCGAACGTCCGGTCa                                                                                        >  1:1314578/1‑150 (MQ=255)
                                                          aCTTCTACGGCAAGCTGCGCAGCAAGCGCGGCGCCTTGGAACTGCGTGACCCGGACGCCTGATCGGCA‑ATGC‑AAAACGCCCGGC‑CTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAACATGCGAACGTCCGGTCaa                                                                                       >  1:2366471/1‑150 (MQ=255)
                                                            ttCTACGGCAAGCTGCGCAGCAAGCGCGGCGCCTTGGAACTGAGTGACCCGGACGCCTGATCGGCA‑ATGC‑AAAACGCCCGGC‑CTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAACAt                                                                                                       <  1:1849584/132‑1 (MQ=255)
                                                            ttCTACGGCAAGCTGCGCAGCAAGCGCGGCGCCTTGGAACTGAGTGACCCGGACGCCTGATCGGCA‑ATGC‑AAAACGCCCGGC‑CTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAACAt                                                                                                       >  2:1849584/1‑132 (MQ=255)
                                                             tCTACGGCAAGCTGCGCAGCAAGCGCGGCGCCTTGGAACTGAGTGACCCGGACGCCTGATCGGCA‑ATGC‑AAAACGCCCGGC‑CTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAACATGCGAACGTCCGGTCAACct                                                                                    >  1:779174/1‑150 (MQ=255)
                                                                  ggCAAGCTGCGCAGCAAGCGCGGCGCCTTGGAACTGAGTGACCCGGACGCCTGATCGGCA‑ATGC‑AAAACGCCCGGC‑CTTGAGGCTGTCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAACATGCGAACGTCCGGTCAACCTCTGCa                                                                               >  1:761512/1‑150 (MQ=255)
                                                                  ggCAAGCTGCGCAGCAAGCGCGGCGCCTTGGAACTGAGTGACCCGGACGCCTGATCGGCA‑ATGC‑AAAACGCCCGGC‑CTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAACATGCGAACGTCCGGTCAACCTCTGCa                                                                               <  2:1374974/150‑1 (MQ=255)
                                                                        cTGCGCAGCAAGCGCGGCGCCTTGGAACTGAGTGACCCGGACGCCTGATCGGCA‑ATGC‑AAAACGCCCGGC‑CTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAACATGCGAACGTCCGGTCAACCTCTGCAtcactc                                                                         >  1:242504/1‑150 (MQ=255)
                                                                         tGCGCAGCAAGCGCGGCGCCTTGGAACTGAGTGACCCGGACGCCTGATCGGCA‑ATGC‑AAAACGCCCGGCTCAAGccgggcgttttgcattgccga                                                                                                                                >  1:224797‑M2/1‑75 (MQ=255)
                                                                         tGCGCAGCAAGCGCGGCGCCTTGGAACTGAGTGACCCGGACGCCTGATCGGCA‑ATGC‑AAAACGCCCGGCTCAAGccgggcgttttgcattgccga                                                                                                                                <  2:224797‑M2/96‑22 (MQ=255)
                                                                         ggcgcAGCAAGCGCGGCGCCTTGGAACTGAGTGACCCGGACGCCTGATCGGCA‑ATGC‑AAAACGCCCGGC‑CTTGAGCCGGGCGTTTTCGTTTGTGCCGATc                                                                                                                          <  2:1216743/99‑1 (MQ=255)
                                                                         ggcgcAGCAAGCGCGGCGCCTTGGAACTGAGTGACCCGGACGCCTGATCGGCA‑ATGC‑AAAACGCCCGGC‑CTTGAGCCGGGCGTTTTCGTTTGTGCCGATc                                                                                                                          >  1:1216743/2‑100 (MQ=255)
                                                                           cgcAGCAAGCGCGGCGCCTTGGAACTGAGGGACCCGGACGCCTGATCGGCA‑ATGC‑AAAACGCCCGGC‑CTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAACATGCGAACGTCCGGTCAACCTCTGCATCACTCAcc                                                                      <  1:613767/150‑1 (MQ=255)
                                                                                 aaGCGCGGCGCCTTGGAACTGAGTGACCCGGACGCCTGATCGGCA‑ATGC‑AAAACGCCCGGC‑CTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAACATGCGAACGTCCGGTCAACCTCTGCATCACTCACCGCAGaa                                                                <  1:1657325/150‑1 (MQ=255)
                                                                                           ccTTGGAACTGAGTGACCCGGACGCCTGATCGGCA‑ATGC‑AAAACGCCCGGC‑CTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAACATGCGAACGTCCGGTCAACCTCTGCATCACTCACCGCAGAAGCAAGACCAt                                                      <  1:1655448/150‑1 (MQ=255)
                                                                                            cTTGGAACTGAGTGACCCGGACGCCTGATCGGCA‑ATGC‑AAAACGCCCGGC‑CTTGAGCCGGGCGTTTTCGTTTGTGc                                                                                                                               >  1:1950585/1‑76 (MQ=255)
                                                                                            cTTGGAACTGAGTGACCCGGACGCCTGATCGGCA‑ATGC‑AAAACGCCCGGC‑CTTGAGCCGGGCGTTTTCGTTTGTGc                                                                                                                               <  2:1950585/76‑1 (MQ=255)
                                                                                             ttGGAACTGAGTGACCCGGACGCCTGATCGGCA‑ATGC‑AAAACGCCCGGCTCAAGccgggcgttttgcattgc                                                                                                                                   >  2:1478015‑M2/1‑55 (MQ=255)
                                                                                             ttGGAACTGAGTGACCCGGACGCCTGATCGGCA‑ATGC‑AAAACGCCCGGCTCAAGccgggcgttttgcattgc                                                                                                                                   <  1:1478015‑M2/73‑19 (MQ=255)
                                                                                             ttGGAACTGAGTGACCCGGACGCCTGATCGGCA‑ATGC‑AAAACGCCCGGC‑CTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAACATg                                                                                                      <  1:500832/100‑1 (MQ=255)
                                                                                             ttGGAACTGAGTGACCCGGACGCCTGATCGGCA‑ATGC‑AAAACGCCCGGC‑CTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAACATg                                                                                                      >  2:500832/1‑100 (MQ=255)
                                                                                               ggAACTGAGTGACCCGGACGCCTGATCGGCA‑ATGC‑AAAACGCCCGGC‑CTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAACATGCGAACGTCCGGTCAACCTCTGCATCACTCACCGCAGAAGCAAGACCATGaac                                                  >  1:1095666/1‑150 (MQ=255)
                                                                                                 aaCTGAGTGACCCGGACGCCTGATCGGCA‑ATGC‑AAAACGCCCGGC‑CTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAACATGCGAACGTCCGGTCAACCTCTGCATCACTCACCGCAGAAGCAAGACCATGaacaa                                                >  1:1858926/1‑150 (MQ=255)
                                                                                                  aCTGAGTGACCCGGACGCCTGATCGGCA‑ATGC‑AAAACGCCCGGC‑CTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAACATGCGAACGTCCGGTCAACCTCTGCATCACTCACCGCAGAAGCAAGACCATGaacaac                                               >  2:1413822/1‑150 (MQ=255)
                                                                                                     gAGTGACCCGGACGCCTGATCGGCA‑ATGC‑AAAACGCCCGGC‑CTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAACATGCGAACGTCCGGTCAACCTCTGCATCACTCACCGCa                                                                   >  1:1470430/1‑127 (MQ=255)
                                                                                                     gAGTGACCCGGACGCCTGATCGGCA‑ATGC‑AAAACGCCCGGC‑CTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAACATGCGAACGTCCGGTCAACCTCTGCATCACTCACCGCa                                                                   <  2:1470430/127‑1 (MQ=255)
                                                                                                       gTGACCCGGACGCCTGATCGGCA‑ATGC‑AAAACGCCCGGC‑CTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAACATGCGAACGTCCGGTCAACCTCTGCATCACTCACCGCAGAAGCAAGACCATGAACAACCCAtt                                          <  1:1413822/150‑1 (MQ=255)
                                                                                                        tGACCCGGACGCCTGATCGGCA‑ATGC‑AAAACGCCCGGC‑CTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAACATGCGAACGTCCGGTCAACCTCTGCATCACTCACCGCAGAAGCAAGACCATGAACAACCCATTc                                         >  1:2066970/1‑150 (MQ=255)
                                                                                                        tGACCCGGACGCCTGATCGGCA‑ATGC‑AAAACGCCCGGC‑CTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAACATGAGAACGTCCGGTCAACCTCTGCATCACTCACCGCAGAAGCAAGACCATGAACAACCCATTc                                         <  2:2370052/150‑1 (MQ=255)
                                                                                                        tGACACGGACGCCTGATCGGCA‑ATGC‑AAAACGCCCGGC‑CTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAACATGCGAACGTCCGGTCAACCTCTGCATCACTCACCGCAGAAGCAAGACCATGAACAACCCATTc                                         <  1:1613519/150‑1 (MQ=255)
                                                                                                          aCCCGGACGCCTGATCGGCA‑ATGC‑AAAACGCCCGGC‑CTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAACATGCGAACGTCCGGTCAACCTCTGCATCACTCACCGCAGAAGCAAGACCATGAACAACCCATTcga                                       >  2:2255732/1‑150 (MQ=255)
                                                                                                           cccGGACGCCTGATCGGCA‑ATGC‑AAAACGCCCGGC‑CTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAACATGCGAACGTCCGGTCAACCTCTGCATCACTCACCGCAGAAGCAAGACCATGAACAACCCATTcgaa                                      <  1:107627/150‑1 (MQ=255)
                                                                                                           cccGGACGCCTGATCGGCA‑ATGC‑AAAACGCCCGGC‑CTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAACATGCGAACGTCCGGTCAACCTCTGCATCACTCACCGCAGAAGCAAGACCATGAACAACCCATTcgaa                                      <  2:1095666/150‑1 (MQ=255)
                                                                                                            ccGGACGCCTGATCGGCA‑ATGC‑AAAACGCCCGGC‑CTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAACATGCGAACGTCCGGTCAACCTCTGTATCACTCACCGCAGAAGCAAGACCATGAACAACCCATTcgaac                                     >  2:1754372/1‑150 (MQ=255)
                                                                                                               gACGCCTGATCGGCA‑ATGC‑AAAACGCCCGGC‑CTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAACATGCGAACGTCCGGTCAACCTCTGCATCACTCACCGCAGAAGCAAGACCATGAACAACCCATTcgaacgaa                                  <  2:1861386/150‑1 (MQ=255)
                                                                                                                  gCCTGATCGGCA‑ATGC‑AAAACGCCCGGC‑CTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAACATGCGAACGTCCGGTCAACCTCTGCATCACTCACCGCAGAAGCAAGACCATGAACAACCCATTCGAACGAATCa                               <  2:2251502/150‑1 (MQ=255)
                                                                                                                    cTGATCGGCA‑ATGC‑AAAACGCCCGGC‑CTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAACATGCGAACGTCCGGTCAACCTCTGCATCACTCACCGCAGAAGCAAGACCATGAACAACCCAt                                           <  1:606946/136‑1 (MQ=255)
                                                                                                                    cTGATCGGCA‑ATGC‑AAAACGCCCGGC‑CTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAACATGCGAACGTCCGGTCAACCTCTGCATCACTCACCGCAGAAGCAAGACCATGAACAACCCAt                                           >  2:606946/1‑136 (MQ=255)
                                                                                                                    cTGATCGGCA‑ATGC‑AAAACGCCCGGC‑CTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAACATGCGAACGTCCGGTCAACCTCTGCATCACTCACCGCAGAAGCAAGACCATGAACAACCCATTCGAACGAATCAGt                             <  2:1405131/150‑1 (MQ=255)
                                                                                                                     tGATCGGCA‑ATGC‑AAAACGCCCGGC‑CTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAACATGCGAACGTCCGGTCAACCTCTGCATCACTCACCGCAGAAGCAAGACCATGAACAACCCATTCGAACGAATCAGtg                            >  2:1635385/1‑150 (MQ=255)
                                                                                                                     tGATCGGCA‑ATGC‑AAAACGCCCGGC‑CTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAACATGCGAACGTCCGGTCAACCTCTGCATCACTCACCGCAGAAGCAAGACCATGAACAACCCATTCGAACGAATCAGtg                            >  1:2365516/1‑150 (MQ=255)
                                                                                                                     tGATCGGCA‑ATGC‑AAAACGCCCGGC‑CTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAACATGCGAACGTCCGGTCAACCTCTGCATCACTCACCGCAGAAGCAAGACCATGAACAACCCATTCGAACGAATCAGtg                            >  2:1570729/1‑150 (MQ=255)
                                                                                                                      gATCGGCA‑ATGC‑AAAACGCCCGGC‑CTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAACATGCGAACGTCCGGTCAACCTCTGCATCACTCACCGCAGAAGCAAGACCATGAACAACCCATTCGAACGAATCAGtgc                           <  1:852594/150‑1 (MQ=255)
                                                                                                                          ggCA‑ATGC‑AAAACGCCCGGC‑CTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAACATGCGAACGTCCGGTCAACCTCTGCATCACTCACCGCAGAAGCAAGACCATGa                                                    <  1:1165203/121‑1 (MQ=255)
                                                                                                                          ggCA‑ATGC‑AAAACGCCCGGC‑CTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAACATGCGAACGTCCGGTCAACCTCTGCATCACTCACCGCAGAAGCAAGACCATGa                                                    >  2:1165203/1‑121 (MQ=255)
                                                                                                                           gCA‑ATGC‑AAAACGCCCGGC‑CTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAACATGCGAACGTCCGGTCAACCTCTGCATCACTCACCGCAGAAGCAAGACCATGAACAACCCATTCGAACGAATCAGTGCTGCAt                      >  1:1455135/1‑150 (MQ=255)
                                                                                                                             a‑aTGC‑AAAACGCCCGGC‑CTTGAGCCGGGCGTTTTCGTTTGTGCCCATCAATGGCGCTGAACCAACATGCGAACGTCCGGTCAACCTCTGCATCACTCACCGCAGAAGCAAGACCATGAACAACCCATTCGAACGAATCAGTGCTGCATTc                    <  2:1741402/150‑1 (MQ=255)
                                                                                                                                tGC‑AAAACGCCCGGC‑CTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAACATGCGAACGTCCGGTCAACCTCTGCATCACTCACCGCAGAAGCAAGACCATGAACAACCCATTcgaa                                      <  2:839394/130‑1 (MQ=255)
                                                                                                                                tGC‑AAAACGCCCGGC‑CTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAACATGCGAACGTCCGGTCAACCTCTGCATCACTCACCGCAGAAGCAAGACCATGAACAACCCATTcgaa                                      >  1:839394/1‑130 (MQ=255)
                                                                                                                                 gC‑AAAACGCCCGGC‑CTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAACATGCGAACGTCCGGTCAACCTCTGCATCACTCACCGCAGAAGCAAGACCATGAACAACCCATTCGAACGAATCAGTGCTGCATTCGcc                 <  1:2048841/150‑1 (MQ=255)
                                                                                                                                     aaaCGCCCGGC‑CTTGAgccgggcgttttgcattgccgatcaggcgtccgggtcactcagttccaaggcgccgcgcttgctgcgcagcttgccgtagaagtgctccagcgcgtgattga                                              >  2:458312‑M2/1‑16 (MQ=255)
                                                                                                                                     aaaCGCCCGGC‑CTTGAgccgggcgttttgcattgccgatcaggcgtccgggtcactcagttccaaggcgccgcgcttgctgcgcagcttgccgta                                                                     <  1:1034374‑M2/95‑80 (MQ=255)
                                                                                                                                     aaaCGCCCGGC‑CTTGAgccgggcgttttgcattgccgatcaggcgtccgggtcactcagttccaaggcgccgcgcttgctgcgcagcttgcc                                                                        <  1:177539‑M2/92‑77 (MQ=255)
                                                                                                                                     aaaCGCCCGGC‑CTTGAgccgggcgttttgcattgccgatcaggcgtccgggtcactcagttccaaggcgccgcgcttgctgcgcagcttgcc                                                                        >  2:177539‑M2/1‑16 (MQ=255)
                                                                                                                                      aaCGCCCGGC‑CTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAACATGCGAACGTCCGGTCAACCTCTGc                                                                                >  1:684341/1‑83 (MQ=255)
                                                                                                                                      aaCGCCCGGC‑CTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAACATGCGAACGTCCGGTCAACCTCTGc                                                                                <  2:684341/83‑1 (MQ=255)
                                                                                                                                         gCCCGGC‑CTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAACATGCGAACGTCCGGTCAACCTCTGCATCACTCACCGCAGAAGCAAGACCATGAACAACCCATTCGAACGAATCAGTGCTGCATTCGCCCCCGAAt          >  1:2401276/1‑150 (MQ=255)
                                                                                                                                            cGGC‑CTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAACATGCGAACGTCCGGTCAACCTCTGCATCACTCACCGCAGAAGCAAGACCATGAACAACCCATTCGAACGAATCAGTGCTGCATTCGCCCCCGAATAcc       >  1:1754321/1‑150 (MQ=255)
                                                                                                                                            cGGC‑CTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAACATGCGAACGTCCGGTCAACCTCTGCATCACTCACCGCAGAAGCAAGACCATGAACAACCCATTCGAACGAATCAGTGCTGCATTCGCCCCCGAATAcc       <  2:242504/150‑1 (MQ=255)
                                                                                                                                            cGGC‑CTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAACATGCGAACGTCCGGTCAACCTCTGCATCACTCACCGCAGAAGCAAGACCATGAACAACCCATTCGAACGAATCAGTGCTGCATTCGCCCCCGAATAcc       >  1:1304974/1‑150 (MQ=255)
                                                                                                                                            cGGC‑CTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAACATGCGAACGTCCGGTCAACCTCTGCATCACTCACCGCAGAAGCAAGACCATGAACAACCCATTCGAACGAATCAGTGCTGCATTCGCCCCCGAATAcc       >  2:1924780/1‑150 (MQ=255)
                                                                                                                                              gC‑CTTGAgccgggcgttttcgtttgtgccgatcaggcgtccgggtcactcagttccaaggcgccgcgctt                                                                                     <  1:23360‑M2/70‑64 (MQ=255)
                                                                                                                                              gC‑CTTGAgccgggcgttttcgtttgtgccgatcaggcgtccgggtcactcagttccaaggcgccgcgctt                                                                                     >  2:23360‑M2/1‑7 (MQ=255)
                                                                                                                                               c‑cTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAACATGCGAACGTCCGGTCAACCTCTGCATCACTCACCGCAGAAGCAAGACCATGAACAACCCATTCGAACGAATCAGTGCTGCATTCGCCCCCGAATACCggg    <  2:1799139/150‑1 (MQ=255)
                                                                                                                                                  ttGAGCCGGGCGTTTTCGTTTGTGCAGATCAATGGCGCTGAACCAACATGCGAACGTCCGGTCAACCTCTGCATCACTCACCGCAGAAGCAAGACCATGAACAACCCATTCGAACGAATCAGTGCTGCATTCGCCCCCGAATACCGGGTg  >  1:242056/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                  
AGTTCGCTGGACCAGGCAGTCGACGGTGCCGCCACCAAGCTCAATCACGCGCTGGAGCACTTCTACGGCAAGCTGCGCAGCAAGCGCGGCGCCTTGGAACTGAGTGACCCGGACGCCTGATCGGCA‑ATGC‑AAAACGCCCGGC‑CTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAACATGCGAACGTCCGGTCAACCTCTGCATCACTCACCGCAGAAGCAAGACCATGAACAACCCATTCGAACGAATCAGTGCTGCATTCGCCCCCGAATACCGGGTG  >  NC_002947/5237446‑5237738

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.