BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5592701 =	89 (1.010)	7 (0.080)	7/236	NT	7.7%	coding (596/747 nt)	PP_4920	lipoprotein
*	?	NC_002947	5592728 =	82 (0.970)	7 (0.080)	7/236	NT	7.7%	coding (623/747 nt)	PP_4920	lipoprotein

Only 100 of 103 total aligned reads displayed.

GTGCCCGGCCAGGAAGACACCTTCTGGAAAACCGTCGAAGAATCGCACCGTGCCTGGCTGATGAGCGTGGGAATGGACAAGGATGCCGAGTTCGTCAAGACCTGGCCGTTCAAGAAATCGCCGCACGTC‑GCCCTGACGTACGGCGCGGTAGTGGTCAAGTATGAGGTCTATGCCATCGCGCCCTATTCCATGGGCCACGTGGAACTGAAGATCCCCTACCCGCGCCTGAATGGCGTACTCAAGCCTGAACTGTTTCCCGGCCGCGGCTGAGGCTTAGCAGCCCATGCAGCACGCC  >  NC_002947/5592583‑5592877

gTGCCCGGCCAGGAAGACACCTTCTGGAAAACCGTCGAAGAATCGCACCGTGCCTGGCTGATGAGCGTGGGAATGGACAAGGATGCCGAGTTCGTCAAGACCTGGCCGTTCAAGAAATCGCCGCACGTC‑GCCCTGACGTACGGCGCGGTa                                                                                                                                                   <  2:612780/150‑1 (MQ=255)

   cccGGCCAGGAAGACACCTTCTGGAAAACCGTCGAAGAATCGCACCGTGCCTGGCTGATGAGCGTGGGAATGGACAAGGATGCCGAGTTCGTCAAGACCTGGCCGTTCAAGAAATCGCCGCACGTC‑GCCCTGACGTACGGCGCGGTAGTg                                                                                                                                                <  1:1052495/150‑1 (MQ=255)

     gggaaacagttcaggcttgagtacgccattcaggcgcgggtaggggatcttcagttccacgtggcccatggaatagggcgcgatggcatagacctcatacttgaccactaccgCGCCGCACGTC‑GCCCTGACGTACGGCGCGGTa                                                                                                                                                   <  2:1971891‑M1/32‑1 (MQ=255)

     gggaaacagttcaggcttgagtacgccattcaggcgcgggtaggggatcttcagttccacgtggcccatggaatagggcgcgatggcatagacctcatacttgaccactaccgCGCCGCACGTC‑GCCCTGACGTACGGCGCGGTa                                                                                                                                                   >  1:1971891‑M1/114‑145 (MQ=255)

      ggCCAGGAAGACACCTTCTGGAAAACCGTCGAAGAATCGCACCGTGCCTGGCTGATGAGCGTGGGAATGGACAAGGATGCCGAGTTCGTCAAGACCTGGCCGTTCAAGAAATCGCCGCACGTC‑GCCCTGACGTACGGCGCGGTAGTGGTc                                                                                                                                             <  1:604390/150‑1 (MQ=255)

        ccAGGAAGACACCTTCTGGAAAACCGTCGAAGAATCGCACCGTGCCTGGCTGATGAGCGTGGGAATGGACAAGGATGCCGAGTTCGTCAAGACCTGGCCGTTCAAGAAATCGCCGCACGTC‑GCCCTGACGTACGGCGCGGTAGTGGTCaa                                                                                                                                           <  1:842621/150‑1 (MQ=255)

          aGGAAGACACCTTCTGGAAAACCGTCGAAGAATCGCACCGTGCCTGGCTGATGAGCGTGGGAATGGACAAGGATGCCGAGTTCGTCAAGACCTGGCCGTTCAAGAAATCGCCGCACGTC‑GCCCTGACGTACGGCGCGGTAGTGGTCAAGt                                                                                                                                         >  2:689396/1‑150 (MQ=255)

               gACACCTTCTGGAAAACCGTCGACGAATCGCCCCGCGCCTGGTGTATGGGCTTGGGAATGGACAAGGATGCCGAGTTCGTCAAGACCTGGCCGTTCAAGAAATCGCCGCACGTC‑GCCCTGACGTACGGCGCGGTAGTGGTCAAGTATGAg                                                                                                                                    <  1:2339984/150‑1 (MQ=255)

                acacCTTCTGGAAAACCGTCGAAGAATCGCACCGTGCCTGGCTGATGAGCGTGGGAATGGACAAGGATGCCGAGTTCGTCAAGACCTGGCCGTTCAAGAAATCGCCGCACGTC‑GCCCTGACGTACGGCGCGGTAGTGGTCAAGTATGAgg                                                                                                                                   >  1:506340/1‑150 (MQ=255)

                  acCTTCTGGAAAACCGTCGAAGAATCGCACCGTGCCTGGCTGATGAGCGTGGGAATGGACAAGGATGCCGAGTTCGTCAAGACCTGGCCGTTCAAGAAATCGCCGCACGTC‑GCCCTGACGTACGGCGCGGTAGTGGTCAAGTATGAGGTc                                                                                                                                 >  2:1055645/1‑150 (MQ=255)

                    cTTCTGGAAAACCGTCGAAGAATCGCACCGTGCCTGGCTGATGAGCGTGGGAATGGACAAGGATGCCGAGTTCGTCAAGACCTGGCCGTTCAAGAAATCGCCGCACGTC‑GCCCTGACGTACGGCGCGGTAGTGGTCAAGTATGAGGTCTa                                                                                                                               >  2:2289176/1‑150 (MQ=255)

                     ttCTGGAAAACCGTCGAAGAATCGCACCGTGCCTGGCTGATGAGCGTGGGAATGGACAAGGATGCCGAGTTCGTCAAGACCTGGCCGTTCAAGAAATCGCCGCACGTC‑GCCCTGACGTACGGCGCGGTa                                                                                                                                                   <  2:1441713/129‑1 (MQ=255)

                     ttCTGGAAAACCGTCGAAGAATCGCACCGTGCCTGGCTGATGAGCGTGGGAATGGACAAGGATGCCGAGTTCGTCAAGACCTGGCCGTTCAAGAAATCGCCGCACGTC‑GCCCTGACGTACGGCGCGGTa                                                                                                                                                   >  1:1441713/1‑129 (MQ=255)

                     ttCTGGAAAACCGTCGAAGAATCGCACCGTGCCTGGCTGATGAGCGTGGGAATGGACAAGGATGCCGAGTTCGTCAAGACCTGGCCGTTCAAGAAATCGCCGCACGTC‑GCCCTGACGTACGGCGCGGTAGTGGTCAAGTATGAGGTCTAt                                                                                                                              <  1:236752/150‑1 (MQ=255)

                     ttCTGGAAAACCGTCGAAGAATCGCACCGTGCCTGGCTGATGAGCGTGGGAATGGACAAGGATGCCGAGTTCGTCAAGACCTGGCCGTTCAAGAAATCGCCGCACGTC‑GCCCTGACGTACGGCGCGGTAGTGGTCAAGTATGAGGTCTAt                                                                                                                              <  2:1347120/150‑1 (MQ=255)

                     ttCTGGAAAACCGTCGAAGAATCGCACCGTGCCTGGCTGATGAGCGTGGGAATGGACAAGGATGCCGAGTTCGTCAAGACCTGGCCGTTCAAGAAATCGCCGCACGTC‑GCCCTGACGTACGGCGCGGTAGTGGTCAAGTATGAGGTCTAt                                                                                                                              >  1:1627340/1‑150 (MQ=255)

                     ttCTGGAAAACCGTCGAAGAATCGCACCGTGCCTGGCTGATGAGCGTGGGAATGGACAAGGATGCCGAGTTCGTCAAGACCTGGCCGTTCAAGAAATCGCCGCACGTC‑GCCCTGACGTACGGCGCGGTAGTGGTCAAGTATGAGGTCTAt                                                                                                                              >  1:1628688/1‑150 (MQ=255)

                     ttCTGGAAAACCGTCGAAGAATCGCACCGTGCCTGGCTGATGAGCGTGGGAATGGACAAGGATGCCGAGTTCGTCAAGACCTGGCCGTTCAAGAAATCGCCGCACGTC‑GCCCTGACGTACGGCGCGGTAGTGGTCAAGTATGAGGTCTAt                                                                                                                              <  2:1355809/150‑1 (MQ=255)

                          gAAAACCGTCGAAGAATCGCACCGTGCCTGGCTGATGAGCGTGGGAATGGACAAGGATGCCGAGTTCGTCAAGACCTGGCCGTTCAAGAAATCGCCGCACGTC‑GCCCTGACGTACGGCGCGGTAGTGGTCAAGTATGa                                                                                                                                     <  2:1848165/138‑1 (MQ=255)

                          gAAAACCGTCGAAGAATCGCACCGTGCCTGGCTGATGAGCGTGGGAATGGACAAGGATGCCGAGTTCGTCAAGACCTGGCCGTTCAAGAAATCGCCGCACGTC‑GCCCTGACGTACGGCGCGGTAGTGGTCAAGTATGa                                                                                                                                     >  1:1848165/1‑138 (MQ=255)

                           aaaaCCGTCGAAGAATCGCACCGTGCCTGGCTGATGAGCGTGGGAATGGACAAGGATGCCGAGTTCGTCAAGACCTGGCCGTTCAAGAAATCGCCGCACGTC‑GCCCTGACGTACGGCGCGGTAGTGGTCAAGTATGAGGTCTATGCCATc                                                                                                                        <  1:2289176/150‑1 (MQ=255)

                             aaCCGTCGAAGAATCGCACCGTGCCTGGCTGATGAGCGTGGGAATGGACAAGGATGCCGAGTTCGTCAAGACCTGGCCGTTCAAGAAATCGCCGCACGTC‑GCCCTGACGTACGGCGCGGTAGTGGTCAAGTATGAGGTCTATGCCATcgc                                                                                                                      >  2:956178/1‑150 (MQ=255)

                               ccGTCGAAGAATCGCACCGTGCCTGGCTGATGAGCGTGGGAATGGACAAGGATGCCGAGTTCGTCAAGACCTGGCCGTTCAAGAAATCGCCGCACGTC‑GCCCTGACGTACGGCGCGGTAGTGGTCAAGTATGAGGTCTATGCCATCgcgc                                                                                                                    >  2:1300172/1‑150 (MQ=255)

                                  ttcaggcgcgggtaggggatcttcagttccacgtggcccatggaatagggcgcgatggcatagacctcatacttgaccactaccgcgccgcacgtcgccctgacgtacggcgCGGTAGTGGTCAAGTa                                                                                                                                        <  2:1597975‑M2/16‑1 (MQ=255)

                                  ttcaggcgcgggtaggggatcttcagttccacgtggcccatggaatagggcgcgatggcatagacctcatacttgaccactaccgcgccgcacgtcgccctgacgtacggcgCGGTAGTGGTCAAGTa                                                                                                                                        >  1:1597975‑M2/113‑128 (MQ=255)

                                  tCGAAGAATCGCACCGTTCCTGGCTGATGAGCGTGGGAATGGACAAGGATGCCGAGTTCGTCAAGACCTGGCCGTTCAAGAAATCGCCGCACGTC‑GCCCTGACGTACGGCGCGGTAGTGGTCAAGTATGAGGTCTATGCCATCGCGCCCt                                                                                                                 >  1:2083859/1‑150 (MQ=255)

                                  tCGAAGAATCGCACCGTGCCTGGCTGATGAGCGTGGGAATGGACAAGGATGCCGAGTTCGTCAAGACCTGGCCGTTCAAGAAATCGCCGCACGTC‑GCCCTGACGTACGGCGCGGTAGTGGTCAAGTATGAGGTCTATGCCATCGCGCCCt                                                                                                                 >  2:409321/1‑150 (MQ=255)

                                    gaagaaTCGCACCGTGCCTGGCTGATGAGCGTGGGAATGGACAAGGATGCCGAGTTCGTCAAGACCTGGCCGTTCAAGAAATCGCCGCACGTC‑GCCCTGACGTACGGCGCGGTAGTGGTCAAGTATGAGGTCTATGCCATCGCGCCCTAt                                                                                                               >  2:991477/1‑150 (MQ=255)

                                      agaaTCGCACCGTGCCTAGCTGATGTGCATAGAAACGGATATGAACACCGAGTTCGTCAAGACCTGGCCGTTCAAGAAATCGCCGCACGTC‑GCCCTGACGTACGGCGCGGTAGTGGTCAAGTATGAGGTCTATGCCATCGCGCCCTATTc                                                                                                             <  2:1468422/150‑1 (MQ=255)

                                        aaTCGCACCGTGCCTGGCTGATGAGCGTGGGAATGGACAAGGATGCCGAGTTCGTCAAGACCTGGCCGTTCAAGAAATCGCCGCACGTC‑GCCCTGACGTACGGCGCGGTAGTGGTCAAGTATGAGGTCTATGCCATCGCGCCCTATTCCa                                                                                                           <  1:991477/150‑1 (MQ=255)

                                         aTCGCACCGTGCCTGGCTGATGAGCGTGGGAATGGACAAGGATGCCGAGTTCGTCAAGACCTGGCCGTTCAAGAAATCGCCGCACGTC‑GCCCTGACGTACGGCGCGGTAGTGGTCAAGTATGAGGTCTATGCCATCGCGCCCTATTCCAt                                                                                                          >  1:1618712/1‑150 (MQ=255)

                                          tCGCACCGTGCCTGGCTGATGAGCGTGGGAATGGACAAGGATGCCGAGTTCGTCAAGACCTGGCCGTTCAAGAAATCGCCGCACGTC‑GCCCTGACGTACGGCGCGGTAGTGGTCAAGTATGAGGTCTATGCCATCGCGCCCTATTCCATg                                                                                                         >  2:2284848/1‑150 (MQ=255)

                                          tCGCACCGTGCCTGGCTGATGAGCGTGGGAATGGACAAGGATGCCGAGTTCGTCAAGACCTGGCCGTTCAAGAAATCGCCGCACGTC‑GCCCTGACGTACGGCGCGGTAGTGCTCAAGTATGAGGTCTATGCCATCGCGCCCTATTCCATg                                                                                                         <  2:1393976/150‑1 (MQ=255)

                                           cGCACCGTGCCTGGCTGATGAGCGTGGGAATGGACAAGGATGCCGAGTTCGTCAAGACCTGGCCGTTCAAGAAATCGCCGCACGTC‑GCCCTGACGTACGGCGCGGTAGTGGTCAAGTATGAGGTCTATGCCATCGCGCCCTATTCCATgg                                                                                                        <  1:462823/150‑1 (MQ=255)

                                                  tGCCTGGCTGATGAGCGTGGGAATGGACAAGGATGCCGAGTTCGTCAAGACCTGGCCGTTCAAGAAATCGCCGCACGTC‑GCCCTGACGTACGGCGCGGTAGTGGTCAAGTATGAGGTCTATGCCATCGCGCCCTATTCCATGGGCCACGt                                                                                                 <  1:2284848/150‑1 (MQ=255)

                                                   gCCTGGCTGATGAGCGTGGGAATGGACAAGGATGCCGAGTTCGTCAAGACCTGGCCGTTCAAGAAATCGCCGCACGTC‑GCCCTGACGTACGGCGCGGTAGTGGTCAAGTATGAGGTCTATGCCATCGCGCCCTATTCCATGGGCCACGTg                                                                                                <  1:1055645/150‑1 (MQ=255)

                                                     cTGGCTGATGAGCGTGGGAATGGACAAGGATGCCGAGTTCGTCAAGACCTGGCCGTTCAAGAAATCGCCGCACGTC‑GCCCTGACGTACGGCGCGGTAGTGGTCAAGTATGAGGTCTATGCCATCGCGCCCTATTCCATGGGCCACGTGGa                                                                                              >  2:312218/1‑150 (MQ=255)

                                                     cTGGCTGATGAGCGTGGGAATGGACAAGGATGCCGAGTTCGTCAAGACCTGGCCGTTCAAGAAATCGCCGCACGTC‑GCCCTGACGTACGGCGCGGTAGTGGTCAAGTATGAGGTCTATGCCATCGCGCCCTATTCCATGGGCCACGTGGa                                                                                              >  2:1927642/1‑150 (MQ=255)

                                                      tGGCTGATGAGCGTGGGAATGGACAAGGATGCCGAGTTCGTCAAGACCTGGCCGTTCAAGAAATCGCCGCACGTC‑GCCCTGACGTACGGCGCGGTAGTGGTCAAGTATGAGGTCTATGCCATCGCGCCCTATTCCATGGGCCACGTGGaa                                                                                             <  1:690438/150‑1 (MQ=255)

                                                        gCTGATGAGCACAGGAAAGGATAATGATGCCGAGTTCGTCAAAACCTCACCGACCCGGAATGGGCGTGTCTTC‑GCCCCGACGTACGGCGCGGTAGTGGTCAAGTATGAGGTCTATGCCATCGCGCCCTATTCCATGGGCCACGTGGAACt                                                                                           <  1:1488709/150‑1 (MQ=255)

                                                         cTGATGAGCGTGGGAATGGACAAGGATGCCGAGTTCGTCAAGACCTGGCCGTTCAAGAAATCGCCGCACGTC‑GCCCTGACGTACGGCGCGGTAGTGGTCAAGTATGAGGTCTATGCCATCGCGCCCTATTCCATGGGCCACGTGGAACTg                                                                                          <  2:506340/150‑1 (MQ=255)

                                                          tgatgaGCGTGGGAATGGACAAGGATGCCGAGTTCGTCAAGACCTGGCCGTTCAAGAAATCGCCGCACGTC‑GCCCTGACGTACGGCGCGGTAGTGGTCAAGTATGAGGTCTATGCCATCGCGCCCTATTCCATGGGCCACGTGGAACTGa                                                                                         <  1:1103333/150‑1 (MQ=255)

                                                           gatgaGCGTGGGAATGGACAAGTATGCCGAGTTCGTCAAGACCTGGGCGTTCAAGAAATCGGCGGACGTC‑GCCCTGACGTACGGCGCGGTAGTGGTCAAGTATGAGGTTTATGCCATTGCGCCCTATTCCATGCGTCATGTGGAACTGaa                                                                                        <  2:939037/150‑1 (MQ=255)

                                                           gatgaGCGTGGGAATGGACAAGGATGCCGAGTTCGTCAAGACCTGGCCGTTCAAGAAATCGCCGCACGTC‑GCCCTGACGTACGGCGCGGTAGTGGTCAAGTATGAGGTCTATGCCATCGCGCCCTATTCCATGGGCCACGTGGAACTGaa                                                                                        <  2:1628688/150‑1 (MQ=255)

                                                           gatgaGCGTGGGAATGGACAAGGATGCCGAGTTCGTCAAGACCTGGCCGTTCAAGAAATCGCCGCACGTC‑GCCCTGACGTACGGCGCGGTAGTGGTCAAGTATGAGGTCTATGCCATCGCGCCCTATTCCATGGGCCACGTGGAACTGaa                                                                                        <  2:1627340/150‑1 (MQ=255)

                                                             tgaGCGTGGGAATGGACAAGGATGCCGAGTTCGTCAAGACCTGGCCGTTCAAGAAATCGCCGCACGTC‑GCCCTGACGTACGGCGCGGTAGTGGTCAAGTATGAGGTATATGCCATCGCGCCCTATTCCATGGGCCACGTGGAACTGAAGa                                                                                      >  1:1716700/1‑150 (MQ=255)

                                                                  gTGGGAATGGACAAGGATGCCGAGTTCGTCAAGACCTGGCCGTTCAAGAAATCGCCGCACGTC‑GCCCTGACGTACGGCGCGGTAGTGGTCAAGTATGAGGTCTATGCCATCGCGCCCTATTCCATGGGCCACGTGGAACTGAAGATcccc                                                                                 >  2:1080384/1‑150 (MQ=255)

                                                                       aaTGGACAAGGATGCCGAGTTCGTCAAGACCTGGCCGTTCAAGAAATCGCCGCACGTC‑GCCCTGACGTACGGCGCGGTAGTGGTCAAGTATGAGGTCTATGCCATCGCGCCCTATTCCATGGGCCACGTGGAACTGAAGATCCCCTAccc                                                                            >  2:2059833/1‑150 (MQ=255)

                                                                        aTGGACAAGGATGCCGAGTTCGTCAAGACCTGGCCGTTCAAGAAATCGCCGCACGTC‑GCCCTGACGTACGGCGCGGTAGTGGTCAAGTATGAGGTCTATGCCATCGCGCCCTATTCCATGGGCCACGTGGAACTGAAGATCCCCTACCcg                                                                           >  2:426368/1‑150 (MQ=255)

                                                                            aCAAGGATGCCGAGTTCGTCAAGACCTGGCCGTTCAAGAAATCGCCGCACGTC‑GCCCTGACGTACGGCGCGGTAGTGGTCAAg                                                                                                                                          >  1:1204630/1‑83 (MQ=255)

                                                                            aCAAGGATGCCGAGTTCGTCAAGACCTGGCCGTTCAAGAAATCGCCGCACGTC‑GCCCTGACGTACGGCGCGGTAGTGGTCAAg                                                                                                                                          <  2:1204630/83‑1 (MQ=255)

                                                                            aCAAGGATGCCGAGTTCGTCAAGACCTGGCCGTTCAAGAAATCGCCGCACGTC‑GCCCTGACGTACGGCGCGGTAGTGGTCAAGTATGAGGTCTATGCCATCGCGCCCTATTcc                                                                                                            <  1:1016266/113‑1 (MQ=255)

                                                                            aCAAGGATGCCGAGTTCGTCAAGACCTGGCCGTTCAAGAAATCGCCGCACGTC‑GCCCTGACGTACGGCGCGGTAGTGGTCAAGTATGAGGTCTATGCCATCGCGCCCTATTcc                                                                                                            >  2:1016266/1‑113 (MQ=255)

                                                                            aCAAGGATGCCGAGTTCGTCAAGACCTGGCCGTTCAAGAAATCGCCGCACGTC‑GCCCTGACGTACGGCGCGGTAGTGGTCAAGTATGAGGTCTATGCCATCGCGCCCTATTCCATGGGCCACGTGGAACTGAAGATCCCCTACCCGCGcc                                                                       >  1:698456/1‑150 (MQ=255)

                                                                                   tGCCGAGTTCGTCAAGACCTGGCCGTTCAAGAAATCGCCGCACGTC‑GCCCTGACGTACGGCGCGGTAGTGGTCAAGTATGAGGTCTATGCCATCGCGCCCTATTCCATGGGCCACGTGGaa                                                                                             >  2:971551/1‑121 (MQ=255)

                                                                                   tGCCGAGTTCGTCAAGACCTGGCCGTTCAAGAAATCGCCGCACGTC‑GCCCTGACGTACGGCGCGGTAGTGGTCAAGTATGAGGTCTATGCCATCGCGCCCTATTCCATGGGCCACGTGGaa                                                                                             <  1:971551/121‑1 (MQ=255)

                                                                                     ccGAGTTCGTCAAGACCTGGCCGTTCAAGAAATCGCCGCACGTC‑GCCCTGACGTACGGCGCGGTAGTGGTCAAGTATGAGGTCTATGCCATCGCGCCCTATTCCATGGGCCACGTGGAACTGAAGATCCCCTACCCGCGCCTGAATGGCg                                                              <  2:1135817/150‑1 (MQ=255)

                                                                                      cGAGTTCGTCAAGACCTGGCCGTTCAAGAAATCGCCGCACGTC‑GCCCTGACGTACGGCGCGGTAGt                                                                                                                                                 <  1:2110595/66‑1 (MQ=255)

                                                                                      cGAGTTCGTCAAGACCTGGCCGTTCAAGAAATCGCCGCACGTC‑GCCCTGACGTACGGCGCGGTAGt                                                                                                                                                 >  2:2110595/1‑66 (MQ=255)

                                                                                          ttCGTCAAGACCTGGCCGTTCAAGAAATCGCCGCACGTC‑GCCCTGACGTACGGCGCGGTAGTGGTCAAGTATGAGGTCTATGCCATCGCGCCCTATTCCATGGGCCACGTGGAACTGAAGATCCCCTACCCGCGCCTGAATGGCGTACTc                                                         >  1:757147/1‑150 (MQ=255)

                                                                                              tCAAGACCTGGCCGTTCAAGAAATCGCCGCACGTC‑GCCCTGACGTACGGCGCGGTAGTGGTCAAGTATGAGGTCTATGCCATCGCGCCCt                                                                                                                 <  1:2037737/90‑1 (MQ=255)

                                                                                              tCAAGACCTGGCCGTTCAAGAAATCGCCGCACGTC‑GCCCTGACGTACGGCGCGGTAGTGGTCAAGTATGAGGTCTATGCCATCGCGCCCt                                                                                                                 >  2:2037737/1‑90 (MQ=255)

                                                                                              tCAAGACCTGGCCGTTCAAGAAATCGCCGCACGTC‑GCCCTGACGTACGGCGCGGTAGTGGTCAAGTATGAGGTCTATGCCATCGCGCCCTATTCCATGGGCCACGTGGAACTGAAGATCCCCTACCCGCGCCTGAAt                                                                  <  2:2390846/137‑1 (MQ=255)

                                                                                              tCAAGACCTGGCCGTTCAAGAAATCGCCGCACGTC‑GCCCTGACGTACGGCGCGGTAGTGGTCAAGTATGAGGTCTATGCCATCGCGCCCTATTCCATGGGCCACGTGGAACTGAAGATCCCCTACCCGCGCCTGAAt                                                                  >  1:2390846/1‑137 (MQ=255)

                                                                                              tCAAGACCTGGCCGTTCAAGAAATCGCCGCACGTC‑GCCCTGACGTACGGCGCGGTAGTGGTCAAGTATGAGGTCTATGCCATCGCGCCCTATTCCATGGGCCACGTGGAACTGAAGATCCCCTACCCGCGCCTGAATGGCGTACTCAAGc                                                     <  2:698456/150‑1 (MQ=255)

                                                                                              tCAAGACCTGGCCGTTCAAGAAATCGCCGCACGTC‑GCCCTGACGTACGGCGCGGTAGTGGTCAAGTATGAGGTCTATGCCATCGCGCCCTATTCCATGGGCCACGTGGAACTGAAGATCCCCTACCCGCGCCTGAATGGCGTACTCAAGc                                                     <  2:1143323/150‑1 (MQ=255)

                                                                                              tCAAGACCTGGCCGTTCAAGAAATCGCCGCACGTC‑GCCCTGACGTACGGCGCGGTAGTGGTCAAGTATGAGGTCTATGCCATCGCGCCCTATTCCATGGGCCACGTGGAACTGAAGATCCCCTACCCGCGCCTGAATGGCGTACTCAAGc                                                     <  1:312218/150‑1 (MQ=255)

                                                                                                aaGACCTGGCCGTTCAAGAAATCGCCGCACGTC‑GCCTTCATGTACGGTGCGGTAGTTGTCAAGTATGAGGTCTATGCCATCGCGCCCTATTCCATGGGCCACGTGGAACTGAAGATCCCCTACCCGCGCCTGAATGGCGTACTCAAGCCt                                                   <  2:1599106/150‑1 (MQ=255)

                                                                                                aaGACCTGGCCGTTCAAGAAATCGCCGCACGTC‑GCCCTGACGTACGGCGCGGTAGTGGTCAAGTATGAGGTCTATGCCATCGCGCCCTATTCCATGGGCCACGTGGAACTGAAGATCCCCTACCCGCGCCTGAATGGCGTACTCAAGCCt                                                   >  2:1471905/1‑150 (MQ=255)

                                                                                                aaGACCTGGCCGTTCAAGAAATCGCCGCACGTC‑GCCCTGACGTACGGCGCGGTAGTGGTCAAGTATGAGGTCTATGCCATCGCGCCCTATTCCATGGGCCACGTGGAACTGAAGATCCCCTACCCGCGCCTGAATGGCGTACTCAAGCCt                                                   >  1:369551/1‑150 (MQ=255)

                                                                                                aaGACCTGGCCGTTCAAGAAATCGCCGCACGTC‑GCCCTGACGTACGGCGCGGTAGTGGTCAAGTATGAGGTCTATGCCATCGCGCCCTATTCCATGGGCCACGTGGAACTGAAGATCCCCTACCCGCGCCTGAATGGCGTACTCAAGCCt                                                   >  1:1237779/1‑150 (MQ=255)

                                                                                                 aGACCTGGCCGTTCAAGAAATCGCCGCACGTC‑GCCCTGACGTACGGCGCGGTAGTGGTCAAGTAt                                                                                                                                       <  2:783042/65‑1 (MQ=255)

                                                                                                 aGACCTGGCCGTTCAAGAAATCGCCGCACGTC‑GCCCTGACGTACGGCGCGGTAGTGGTCAAGTAt                                                                                                                                       >  1:783042/1‑65 (MQ=255)

                                                                                                     cTGGCCGTTCAAGAAATCGCCGCACGTC‑GCCCTGACGTACGGCGCGGTAGTg                                                                                                                                                >  1:1372968/1‑52 (MQ=255)

                                                                                                     cTGGCCGTTCAAGAAATCGCCGCACGTC‑GCCCTGACGTACGGCGCGGTAGTg                                                                                                                                                <  2:1372968/52‑1 (MQ=255)

                                                                                                      tacttgaccactaccgCGCCGTACGTCAGGGC‑GACGTGCGGCGCGGTAGTGGTCAAGTATGAGGTCTATGCCATCGCGCCCTATTCCATGGGCCACGTGGAACTGAAGATCCCCTACCCGCGCCTGaa                                                                   <  2:1597975‑M1/112‑1 (MQ=255)

                                                                                                      tacttgaccactaccgCGCCGTACGTC‑AGGGCGACGTGCGGCGCGGTAGTGGTCAAGTATGAGGTCTATGCCATCGCGCCCTATTCCATGGGCCACGTGGAACTGAAGATCCCCTACCCGCGCCTGaa                                                                   >  1:1597975‑M1/17‑128 (MQ=255)

                                                                                                        gCCGTTCAAGAAATCGCCGCACGTC‑GCCCTGACGTACGGCGCGGTAGTGGTCAAGTATGAGGTCTATGCCATCGCGCCCTATTCCATGGGCCACGTGGAACTGAAGATCCCCTACCCGCGCCTGAATGGCGTACTCAAGCCTGAACTGtt                                           >  1:894698/1‑150 (MQ=255)

                                                                                                          cGTTCAAGAAATCGCCGCACGTC‑GCCCTGACGTACGGCGCGGTAGTGGTCAAGTATGAGGTCTATGCCATCGCGCCCTATTCCATGGGCCACGTGGAACTGAAGATCCCCTACCCGCGCCTGAATGGCGTACTCAAGCCTGAACTGTTTc                                         >  1:1786011/1‑150 (MQ=255)

                                                                                                           gTTCAAGAAATCGCCGCACGTC‑GCCCTGACGTACGGCGCGGTAGTGGTCAAGTATGAGGTCTATGCCATCGCGCCCTATTCCATGGGc                                                                                                      >  1:968896/1‑88 (MQ=255)

                                                                                                           gTTCAAGAAATCGCCGCACGTC‑GCCCTGACGTACGGCGCGGTAGTGGTCAAGTATGAGGTCTATGCCATCGCGCCCTATTCCATGGGc                                                                                                      <  2:968896/88‑1 (MQ=255)

                                                                                                              cAAGAAAACGCCGCACGTC‑GCCCTGACGTACGGCGCGGTAGTGGTCAAGTATGAGGTCTATGCCATCGCGCCCAATTCCATGGGCCACGTGGAACTGAAGATCCCCTACCCGCGACTGAATGGCGTACTCAAGCCTGAACTGTTTCCCgg                                     <  1:689396/150‑1 (MQ=255)

                                                                                                                  taccgcgccgtacgtcagggcgacgtgcggcgCGGTAGTGGTCAAGTATGAGGTCTATGCCATCGCGCCCTATTCCATGGGCCACGTGGAACTGAAGATCCCCTACCCGCGCCTGAATGGCGTACTCAAGCCTGAACTGTTTccc                                       <  2:1971891‑M2/113‑1 (MQ=255)

                                                                                                                  taccgcgccgtacgtcagggcgacgtgcggcgCGGTAGTGGTCAAGTATGAGGTCTATGCCATCGCGCCCTATTCCATGGGCCACGTGGAACTGAAGATCCCCTACCCGCGCCTGAATGGCGTACTCAAGCCTGAACTGTTTccc                                       >  1:1971891‑M2/33‑145 (MQ=255)

                                                                                                                   agtCGCCGCACGTC‑GCCCTGACGTACGGCGCGGTAGTGGTCAAGTATGAGGTCTATGCCATCGCGCCCTATTCCATGGGCCACGTGGAACTGAAGATCCCCTACCCGCGCCTGAATGGCGTACTCAAGCCTGAACTGTTTCCCGGCcgcg                                >  2:2212520/3‑150 (MQ=255)

                                                                                                                        CCGCACGTC‑GCCCTGACGTACGGCGCGATAGTGGTCAAGTATGAGGTCTATGCCATCGCGCCCTATTCCATGGGCCACGTGGAACTGAAGATCCCCTACCCGCGCCTGAATGGCGTACTCAAGCCTGAACTGTTTCCCGGCCGCGGCTGa                           <  2:918530‑M1/150‑1 (MQ=255)

                                                                                                                          cgtacgtcagggcgacgtgcggcgCGGTAGTGGTCAAGTATGAGGTCTATGCCATCGCGCCCTATTCCATGGGCCACGTGGAACTGAAGATCCCCTACCCGCGCCTGAATGGCGTACTCAAGCCTGAACTGTTTCCCGGCCGCGGCTGAg                          >  2:1965072‑M2/25‑150 (MQ=255)

                                                                                                                            tacgtcagggcgacgtgcggcgCGGTAGTGGTCAAGTATGAGGTCTATGCCATc                                                                                                                        >  1:1212537‑M2/23‑54 (MQ=255)

                                                                                                                            tacgtcagggcgacgtgcggcgCGGTAGTGGTCAAGTATGAGGTCTATGCCATc                                                                                                                        <  2:1212537‑M2/32‑1 (MQ=255)

                                                                                                                               tC‑GCCCTGACGTACGGCGCGGTAGTGGTCAAGTATGAGGTCTATGCCATCGCGCCCTATTCCATGGGCCACGTGGAACTGAAGATCCCCTACCcgc                                                                          >  1:1210482/1‑96 (MQ=255)

                                                                                                                               tC‑GCCCTGACGTACGGCGCGGTAGTGGTCAAGTATGAGGTCTATGCCATCGCGCCCTATTCCATGGGCCACGTGGAACTGAAGATCCCCTACCcgc                                                                          <  2:1210482/96‑1 (MQ=255)

                                                                                                                               tC‑GCCCTGACGTACGGCGCGGTAGTGGTCAAGTATGAGGTCTATGCCATCGCGCCCTATTCCATGGGCCACGTGGAACTGAAGATCCCCTACCCGCGCCTGAATGGCGTACTCAAGCCTGAACTGTTTCCCGGCCGCGGCTGAGGCTTag                    <  1:426368/150‑1 (MQ=255)

                                                                                                                               tC‑GCCCTGACGTACGGCGCGGTAGTGGTCAAGTATGAGGTCTATGCCATCGCGCCCTATTCCATGGGCCACGTGGAACTGAAGATCCCCTACCCGCGCCTGAATGGCGTACTCAAGCCTGAACTGTTTCCCGGCCGCGGCTGAGGCTTag                    <  1:1927642/150‑1 (MQ=255)

                                                                                                                                   cccTGACGTACGGCGCGGTAGTGGTCAAGTATGAGGTCTATGCCATCGCGCCCTATTCAATGGGCCACGTGGAACTGAAGATCCCCTACCCGCGCCTGAATGGCGTACTCAAGCCTGAACTGTTTCCCGGCCGCGGCTGAGGCTTagcaa                 >  2:903978/1‑149 (MQ=255)

                                                                                                                                     cTGACGTACGGCGCGGTAGTGGTCAAGTATGAGGTCTATGCCATCGCGCCCTATTCCATGGGCCACGTGGAACTGAAGATCCCCTACCCGCGCCTGAATGGCGTACTCAAGCCTGAACTGTTTCCCGGCCGCGGCTGAGGCTTAGCAGcc               <  2:894698/150‑1 (MQ=255)

                                                                                                                                           tACGGCGCGGTAGTGGTCAAGTATGAGGTCTATGTCATCGCGCCCTATTCCATGGGCCACGTGGAACTGAAGATCCCCTACCCGCGCCTGAATGGCGTACTCAAGCCTGAACTGTTTCCCGGCCGCGGCTGAGGCTTAGCAGCCCATgca         <  2:1364989/150‑1 (MQ=255)

                                                                                                                                              ggcgCGGTAGTGGTCAAGTATGAGGTCTATGCCATCGCGCCCTATTCCATGGGCCACGTGGAACTGAAGATCCCCTACCCGCGCCTGAATGGCGTACTCAAGCCTGAACTGTTTCCCGGCCGCGGCTGAGGCTTAGCAGCCCATgcagca      >  1:2186553‑M2/5‑150 (MQ=255)

                                                                                                                                               gcgCGGTAGTGGTCAAGTATGAGGTCTATGCCATCGCGCCCTATTCCATGGGCCACGTGGAACTGAAGATCCCCTACCCGCGCCTGAATGGCGTACTCAAGCCTGAACTGTTTCCCGGCCGCGGCTGAGGCTTAGCAGCCCATGCAGCAc     >  1:715101‑M2/4‑150 (MQ=255)

                                                                                                                                               gcgCGGTAGTGGTCAAGTATGAGGTCTATGCCATCGCGCCCTATTCCATGGGCCACGTGGAACTGAAGATCCCCTACCCGCGCCTGAATGGCGTACTCAAGCCTGAACTGTTTCCCGGCCGCGGCTGAGGCTTAGCAGCCCATGCAGCAc     >  1:1516331‑M2/4‑150 (MQ=255)

                                                                                                                                                  cgGTAGTGGTCAAGTATGAGGTCTATGCCATCGCGCCCTATTCCATGGGACAAGTGAAACAGAAGATCCCCTACCCGCGCCTGAATAGCGTACTCAAGCCTGAACTGATTCCCGGCCGCGGCTGAGGCTTAGCAGGCCATGCAGCACGcc  >  2:1072332/1‑150 (MQ=255)

GTGCCCGGCCAGGAAGACACCTTCTGGAAAACCGTCGAAGAATCGCACCGTGCCTGGCTGATGAGCGTGGGAATGGACAAGGATGCCGAGTTCGTCAAGACCTGGCCGTTCAAGAAATCGCCGCACGTC‑GCCCTGACGTACGGCGCGGTAGTGGTCAAGTATGAGGTCTATGCCATCGCGCCCTATTCCATGGGCCACGTGGAACTGAAGATCCCCTACCCGCGCCTGAATGGCGTACTCAAGCCTGAACTGTTTCCCGGCCGCGGCTGAGGCTTAGCAGCCCATGCAGCACGCC  >  NC_002947/5592583‑5592877

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.