New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5822301	76 (0.860)	9 (0.110)	8/234	NT	10.9%	coding (205/435 nt)	PP_5099	hypothetical protein
	?	NC_002947	= 5822311	75 (0.890)					coding (215/435 nt)	PP_5099	hypothetical protein

CCCCGAGCGCAAGGAGGTATTTGGCGACGTGACGGTGCACTACAGCGCATTCACCTCGAGCATGCTCACACCCAAGGTGGCCGCGGCCACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCAGTGACCTGACCGGGCGCAGCAGCCCGCTGTCGTTCAAGCAGATTACCGAACAGGGCGCGGTGTATTACATCGCCCAGTTCAAGATCGATCAGCCAGAAACCGTCACCTTCG  >  NC_002947/5822168‑5822460                                                                                                                                                |                                                                                                                                                      ccccGAGCGCAAGGAGGTATTTGGCGACGTGACGGTGCACTACAGCGCATTCACCTCGAGCATGCTCACACCCAAGGTGGCCGCGGCCACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCcggcaa                                                                                                                                                 <  2:459757‑M2/150‑7 (MQ=255)  cccGAGCGCAAGGAGGTATTTGGCGACGTGACGGTGCACTACAGCGCATTCACCTCGAGCATGCTCACACCCAAGGTGGCCGCGGCCACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCcggcaa                                                                                                                                                 >  2:1550730‑M2/1‑143 (MQ=255)  cccGAGCGCAAGGAGGTATTTGGCGACGTGACGGTGCACTACAGCGCATTCACCTCGAGCATGCTCACACCCAAGGTGGCCGCGGCCACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCcggcaa                                                                                                                                                 <  1:1550730‑M2/149‑7 (MQ=255)       gcgcAAGGAGGTATTTGGCGACGTGACGGTGCACTACAGCGCATTCACCTCGAGCATGCTCACACCCAAGGTGGCCGCGGCCACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGGCCTCGAGCAcggcaatgttga                                                                                                                                           >  2:1093269‑M2/1‑138 (MQ=255)         gcAAGGAGGTATTTGGCGGCGTGACGGTGCACTACAGCGCATTCACCGCGAGCATGCTCACACCCAAGGTGGCCGCGGCCTCCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCAccc                                                                                                                                         <  2:838835/150‑1 (MQ=255)           aaGGAGGTATTTGGCGACGTGACGGTGCACTACAGCGCATTCACCTCGAGCATGCTCACACCCAAGGTGGCCGCGGCCACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCa                                                                                                                                       >  1:1095411/1‑150 (MQ=255)                 gTATTTGGCGACGTGACGGTGCACTACAGCGCATTCACCTCGAGCATGCTCACACCCAAGGTGGCCGCGGCCACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTg                                                                                                                                 <  2:901877/150‑1 (MQ=255)                    tttGGCGACGTGACGGTGCACTACAGCGCATTCACCTCGAGCATGCTCACACCCAAGGTGGCCGCGGCCACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCc                                                                                                                                                      >  2:418162‑M2/1‑125 (MQ=255)                    tttGGCGACGTGACGGTGCACTACAGCGCATTCACCTCGAGCATGCTCACACCCAAGGTGGCCGCGGCCACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCc                                                                                                                                                      <  1:418162‑M2/126‑2 (MQ=255)                              tGACGGTGCACTACAGCGCATTCACCTCGAGCATGCTCACACCCAAGGTGGCCGCGGCCACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAgg                                                                                                                    >  1:1659316/1‑150 (MQ=255)                               gACGGTGCACTACAGCGCATTCACCTCGAGCATGCTCACACCCAAGGTGGCCGCGGCCACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGt                                                                                                                   >  1:1760158/1‑150 (MQ=255)                                 cGGTGCACTACAGCGCATTCACCTCGAGCATGCTCACACCCAAGGTGGCCGCGGCCACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCa                                                                                                                 <  2:192977/150‑1 (MQ=255)                                  ggTGCACTACAGCGCATTCACCTCGAGCATGCTCAGACCCAAGGTGGCCGCGGCCACCGGCCTGGTTAGCAGCAAGTACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCAg                                                                                                                >  1:1939428/1‑150 (MQ=255)                                   gTGCACTACAGCGCATTCACCTCGAGCATGCTCACACCCAAGGTGGCCGCGGCCACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCAGt                                                                                                               <  1:775707/150‑1 (MQ=255)                                   gTGCACTACAGCGCATTCACCTCGAGCATGCTCACACCCAAGGTGGCCGCGGCCACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGCTCAGCGGTAAGGTCAGt                                                                                                               <  2:1237378/150‑1 (MQ=255)                                     gCACTACAGCGCATTCACCTCGAGCATGCTCACACCCAAGGTGGCCGCGGCCACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCAGtga                                                                                                             >  2:1825267/1‑150 (MQ=255)                                      cACTACAGCGCATTCACCTCGAGCATGCTCACACCCAAGGTGGCCGCGGCCACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCAGtgac                                                                                                            <  1:2275274/150‑1 (MQ=255)                                        cTACAGCGCATTCACCTCGAGCATGCTCACACCCAAGGTGGCCGCGGCCACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCAGtgacct                                                                                                          >  1:1197763/1‑150 (MQ=255)                                            aGCGCATTCACCTCGAGCATGCTCACACCCAAGGTGGCCGCGGCCACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTaa                                                                                                                      <  2:13531/134‑1 (MQ=255)                                            aGCGCATTCACCTCGAGCATGCTCACACCCAAGGTGGCCGCGGCCACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTaa                                                                                                                      >  1:13531/1‑134 (MQ=255)                                            aGCGCATTCACCTCGAGCATGCTCACACCCAAGGTGGCCGCGGCCACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCAGt                                                                                                               >  1:933684/1‑141 (MQ=255)                                            aGCGCATTCACCTCGAGCATGCTCACACCCAAGGTGGCCGCGGCCACCGGCCTGGGGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCAGt                                                                                                               <  2:933684/141‑1 (MQ=255)                                              cgcATTCACCTCGAGCATGCTCACACCCAAGGTGGCCGCGGCCACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCAGTGACCTGACCgg                                                                                                    <  2:1760158/150‑1 (MQ=255)                                                cATTCACCTCGAGCATGCTCACACCCAAGGTGGCCGCGGCCACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCgg                                                                                                                         <  2:1184863/127‑1 (MQ=255)                                                cATTCACCTCGAGCATGCTCACACCCAAGGTGGCCGCGGCCACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCgg                                                                                                                         >  1:1184863/1‑127 (MQ=255)                                                   tCACCTCGAGCATGCTCACACCCAAGGTGGCCGCGGCCACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCa                                                                                                                             >  1:649875/1‑120 (MQ=255)                                                   tCACCTCGAGCATGCTCACACCCAAGGTGGCCGCGGCCACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCa                                                                                                                             <  2:649875/120‑1 (MQ=255)                                                     aCCTCGAGCATGCTCACACCCAAGGTGGCCGCGGCCACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCAGTGACCTGACCGGGCgcagc                                                                                             >  1:877985/1‑150 (MQ=255)                                                       cTCGAGCATGCTCACACCCAAGGTGGCCGCGGCCACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCAGTGACCTGACCGGGCGcagcag                                                                                           >  2:616652/1‑150 (MQ=255)                                                             cATGCTCACACCCAAGGTGGCCGCGGCCACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCAGTGACCTGACCGGGCGCAGCAGCCCGCt                                                                                     <  2:363543/150‑1 (MQ=255)                                                                  tCACACCCAAGGTGGCCGCGGCCACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCAGTGACCTGACCGGGCGCAGCAGCCCGCTGTCGt                                                                                >  1:1476123/1‑150 (MQ=255)                                                                  tCACACCCAAGGTGGCCGCGGCCACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCAGTGACCTGACCGGGCGCAGCAGCCCGCTGTCGt                                                                                >  1:1555692/1‑150 (MQ=255)                                                                      caggccggTGGCCGTGGCCACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCAGTGACCTGACCGGGCGCAGCAGCCCGCTGTCGTTCaa                                                                            >  2:109122/7‑150 (MQ=255)                                                                        ccAAGGTGGCCGCGGCCACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCAGTGACCTGACCGGGCGCAGCAGCCCGCTGTCGTTCAAGc                                                                          >  1:2193197/1‑150 (MQ=255)                                                                        ccAAGGTGGCCGCGGCCACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCAGTGACCTGACCGGGCGCAGCAGCCCGCTGTCGTTCAAGc                                                                          >  2:2235240/1‑150 (MQ=255)                                                                         cAAGGTGGCCGCGGCCACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCAGTGACCTGACCGGGCGCAGCAGCCCGCTGTCGTTCAAGCa                                                                         >  2:753815/1‑150 (MQ=255)                                                                         cAAGGTGGCCGCGGCCACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCAGTGACCTGACCGGGCGCAGCAGCCCGCTGTCGTTCAAGCa                                                                         <  1:1491505/150‑1 (MQ=255)                                                                          aaGGTGGCCGCGGCCACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGATCACCATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCAGTGACCTGACCGGGCGCAGCAGCCCGCTGTCGTTCAAGCAg                                                                        >  2:2393127/1‑150 (MQ=255)                                                                            ggTGGCCGCGGCCACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAg                                                                                                                     >  1:1335558/1‑103 (MQ=255)                                                                            ggTGGCCGCGGCCACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAg                                                                                                                     <  2:1335558/103‑1 (MQ=255)                                                                               ggCCGCGGCCACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCAGTGACCTGACCGGGCGCAGCAGCCCGCTGTCGTTCAAGCAGATTAc                                                                   <  1:2393127/150‑1 (MQ=255)                                                                                gCCGCGGCCACCGGCCGGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCAGTGACCTGACCGGGCGCAGCAGCTCGCTGTCGTTCAAGCAGATTAcc                                                                  <  2:1939428/150‑1 (MQ=255)                                                                                   gcgGCCACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCAGTGACCTGACCGGGCGCAGCAGCCCGCTGTCGTTCAAGCAGATTACCGaa                                                               >  2:1489306/1‑150 (MQ=255)                                                                                   gcgGCCACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCGCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCAGTGACCTGACCGGGCGCAGCAGCCCGCTGTCGTTCAAGCAGATTACCGaa                                                               >  1:778606/1‑150 (MQ=255)                                                                                    cgGCCACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCAGt                                                                                                               <  2:1798900/101‑1 (MQ=255)                                                                                    cgGCCACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCAGt                                                                                                               >  1:1798900/1‑101 (MQ=255)                                                                                       ccACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTACGCGGTAATGTCAGTGACCTGACCGGGCGCAGCAGCCCGCTGTCGTTCAAGCAGATTACCGAACAgg                                                           >  1:610944/1‑150 (MQ=255)                                                                                        cACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAACAGCCGCGGAGATAGCTGGCGCAGCAGCCCGCTGTCGTTCAAGCAGATTACCGAACAggg                                                          >  2:675524/1‑150 (MQ=255)                                                                                            ggCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCAGTGACCTGACCGGGCGCAGCAGCCCGCTGTCGTTCAAGCAGATTACCGAACAGGGcgcg                                                      <  1:616652/150‑1 (MQ=255)                                                                                             gCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCg                                                                                                                          <  1:1575947/81‑1 (MQ=255)                                                                                             gCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCg                                                                                                                          >  2:1575947/1‑81 (MQ=255)                                                                                                 ggTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCAGTGACCTGACCGGGCGCAGCAGCCCGCTGTCGTTCAAGCAGATTACCGAACAGGGCGCGGTGTa                                                 <  1:109122/150‑1 (MQ=255)                                                                                                 ggTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCAGTGACCTGACCGGGCGCAGCAGCCCGCTGTCGTTCAAGCAGATTACCGAACAGGGCGCGGTGTa                                                 <  1:1112700/150‑1 (MQ=255)                                                                                                    gcgcAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCCGCACTGGTCAGCGGTAAGGTCAGTGACCTGACCGGGCGCAGCAGCCCGCTGTCGTACAGACAGATTACCGAACAGGGCGCGGTGTATTa                                              <  1:675524/150‑1 (MQ=255)                                                                                                      gcagcaAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTAAGCGGTAAGGTCAGTGACCTGACCGGGCGCAGCAGCCCGCTGTCGTTCAAGCAGATTACCGAACAGGGCGCGGTGTATTACa                                            <  2:326611/150‑1 (MQ=255)                                                                                                         gcaAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCAGTGACCTGACCGGGCGCAGCAGCCCGCTGTCGTTCAAGCAGATTACCGAACAGGGCGCGTTGTATTACATCg                                         >  2:773631/1‑150 (MQ=255)                                                                                                            aGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGGAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCAGTGACCTGACCGGGCGCAGCAGCCCGCTGTCGTTCAAGCAGATTACCGAACAGGGCGCGGTGTATTACATCGccc                                      >  1:2291397/1‑150 (MQ=255)                                                                                                               aCCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCAGTGACCTGACCGGGCGCAGCAGCCCGCTGTCGTTCAAGCAGATTACCGAACAGGGCGCGGTGTATTACATCGCCCAGt                                   <  2:1555692/150‑1 (MQ=255)                                                                                                                ccAGGGCGTGCTCAACATTGCCGTGCTCAAGGCcggcaatgttgagcacgccc                                                                                                                                   <  1:557890‑M2/53‑21 (MQ=255)                                                                                                                ccAGGGCGTGCTCAACATTGCCGTGCTCAAGGCcggcaatgttgagcacgccc                                                                                                                                   >  2:557890‑M2/1‑33 (MQ=255)                                                                                                                 cAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCAccc                                                                                                                                         <  2:2230376/46‑1 (MQ=255)                                                                                                                 cAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCAccc                                                                                                                                         >  1:2230376/1‑46 (MQ=255)                                                                                                                  aGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCAGTGACCTGACCGGGCGCAGCAGCCCGCTGTCGTTCAAGCAGATTACCGAACAGGGCGCGGTGTATTACATCGCCCAGTTCa                                <  1:1814296/150‑1 (MQ=255)                                                                                                                   gggCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCAGTGACCTGACCGGGCGCAGCAGCCCGCTGTCGTTCAAGCAGATTACCGAACAGGGCGCGGTGTATTACATCGCCCAGTTCaa                               <  1:958592/150‑1 (MQ=255)                                                                                                                       gTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCAGTGACCTGACCGGGCGCAGCAGCCCGCTGTCGTTCAAGCAGATTACCGAACAGGGCGCGGTGTATTACATCGCCCAGTTCAAgatc                           <  1:206298/150‑1 (MQ=255)                                                                                                                           tCAACATTGCCGTGCTCAAGGCcggcaatgttgagcacgccctggttcttgctgcgcaccaggccggtggccgcggccaccttgggtgtga                                                                                  <  1:707580‑M2/91‑70 (MQ=255)                                                                                                                           tCAACATTGCCGTGCTCAAGGCcggcaatgttgagcacgccctggttcttgctgcgcaccaggccggtggccgcggccaccttgggtgtga                                                                                  >  2:707580‑M2/1‑22 (MQ=255)                                                                                                                           tCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCAGTGACCTGACCGGGCGCAGCAGCCCGCTGTCGTTCAAGCAGATTa                                                                    >  1:600217/1‑105 (MQ=255)                                                                                                                           tCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCAGTGACCTGACCGGGCGCAGCAGCCCGCTGTCGTTCAAGCAGATTa                                                                    <  2:600217/105‑1 (MQ=255)                                                                                                                           tCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCAGTGACCTGACCGGGCGCAGCAGCCCGCTGTCGTTCAAGCAGATTACCGAACAGGGCGCGGTGTa                                                 >  2:1180897/1‑124 (MQ=255)                                                                                                                           tCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCAGTGACCTGACCGGGCGCAGCAGCCCGCTGTCGTTCAAGCAGATTACCGAACAGGGCGCGGTGTa                                                 <  1:1180897/124‑1 (MQ=255)                                                                                                                           tCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCAGTGACCTGACCGGGCGCAGCAGCCCGCTGTCGTTCAAGCAGATTACCGAACAGGGCGCGGTGTATTACATCGCCCAGTTCAAgatcgatc                       >  1:2248317/1‑150 (MQ=255)                                                                                                                           tCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCAGTGACCTGACCGGGCGCAGCAGCCCGCTGTCGTTCAAGCAGATTACCGAACAGGGCGCGGTGTATTACATCGCCCAGTTCAAgatcgatc                       >  1:2140635/1‑150 (MQ=255)                                                                                                                           tCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCAGTGACCTGACCGGGCGCAGCAGCCCGCTGTCGTTCAAGCAGATTACCGAACAGGGCGCGGTGTATTACATCGCCCAGTTCAAgatcgatc                       <  2:1095411/150‑1 (MQ=255)                                                                                                                             aaCATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCAGTGACCTGACCGGGCGCAGCAGCCCGCTGTCGTTCAAGCAGATTACCGAACAGGGCGCGgt                                                    <  1:832021/119‑1 (MQ=255)                                                                                                                             aaCATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCAGTGACCTGACCGGGCGCAGCAGCCCGCTGTCGTTCAAGCAGATTACCGAACAGGGCGCGgt                                                    >  2:832021/1‑119 (MQ=255)                                                                                                                             aaCATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCAGTGACCTGACCGGGCGCAGCAGCCCGCTGTCGTTCAAGCAGATTACCGAACAGGGCGCGgt                                                    <  1:1304207/119‑1 (MQ=255)                                                                                                                             aaCATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCAGTGACCTGACCGGGCGCAGCAGCCCGCTGTCGTTCAAGCAGATTACCGAACAGGGCGCGgt                                                    >  2:1304207/1‑119 (MQ=255)                                                                                                                             aaCATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCAGTGACCTGACCGGGCGCAGCAGCCCGCTGTCGTTCAAGCAGATTACCGAACAGGGCGCGGTGTATTACATCGCCCAGTTCAAGATCGATCAg                     >  2:2101910/1‑150 (MQ=255)                                                                                                                                aTTGCCGTGCTCAAGGCcggcaatgttgagcacgccctggttcttgc                                                                                                                         >  2:513947‑M2/1‑17 (MQ=255)                                                                                                                                aTTGCCGTGCTCAAGGCcggcaatgttgagcacgccctggttcttgc                                                                                                                         <  1:513947‑M2/47‑31 (MQ=255)                                                                                                                                aTTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCAGTGACCTGACCGGGCGCAGCAGCCCGCTGTCGTTCAAGCAGATTACCGAACAGGGCGCGGTGTATTACATCGCCCAGTTCAAGATCGATCAGCCa                  <  2:2087931/150‑1 (MQ=255)                                                                                                                                aTTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCAGTGACCTGACCGGGCGCAGCAGCCCGCTGTCGTTCAAGCAGATTACCGAACAGGGCGCGGTGTATTACATCGCCCAGTTCAAGATCGATCAGCCa                  >  1:2072619/1‑150 (MQ=255)                                                                                                                                 ttGCCGTGCTCAAGGCcggcaatgttgagcacgccctggttcttgct                                                                                                                        >  1:1327318‑M2/1‑16 (MQ=255)                                                                                                                                 ttGCCGTGCTCAAGGCcggcaatgttgagcacgccctggttcttgct                                                                                                                        <  2:1327318‑M2/47‑32 (MQ=255)                                                                                                                                          tCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCAGTGACCTGACCGGGCGCAGCAGCCCGCTGTCGTTCAAGCAGATTACCGAACAGGGCGCGGTGTATTACATCGCCCAGTTCAAGATCGATCAg                     >  1:1737454/1‑137 (MQ=255)                                                                                                                                          tCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCAGTGACCTGACCGGGCGCAGCAGCCCGCTGTCGTTCAAGCAGATTACCGAACAGGGCGCGGTGTATTACATCGCCCAGTTCAAGATCGATCAg                     <  2:1737454/137‑1 (MQ=255)                                                                                                                                          tCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCAGTGACCTGACCGGGCGCAGCAGCCCGCTGTCGTTCAAGCAGATTACCGAACAGGGCGCGGTGTATTACATCGCCCAGTTCAAGATCGATCAGCCAGAAACCGTCa        >  2:1594880/1‑150 (MQ=255)                                                                                                                                           cAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCAGTGACCTGACCGGGCGCAGCAGCCCGCTGTCGTTCAAGCAGATTACCGAACAGGGCGCGGTGTATTACATCGCCCAGTTCAAGATCGATCAGCCAGAAACCGTCAc       <  1:459757/150‑1 (MQ=255)                                                                                                                                            aaGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCAGTGACCTGACCGGGCGCAGCAGCCCGCTGTCGTTCAAGCAGATTACCGAACAGGGCGCGGTGTa                                                 >  2:1556032/1‑107 (MQ=255)                                                                                                                                            aaGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCAGTGACCTGACCGGGCGCAGCAGCCCGCTGTCGTTCAAGCAGATTACCGAACAGGGCGCGGTGTa                                                 <  1:1556032/107‑1 (MQ=255)                                                                                                                                              ggCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCAGTGACCTGACCGGGCGCAGCAGCCCGCTGTCGTTCAAGCAGATTACCGAACAGGGCGCGGTGTATTACATCGCCCAGTTCAAGATCGATCAGCCAGAAACCGTCACCtt    >  1:1858874/1‑150 (MQ=255)                                                                                                                                               gCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCAGTGACCTGACCGGGCGCAGCAGCCCGCTGTCGTTCAAGCAGATTACCGAACAGGGCGCGGTGTATTACATCGCCCAGTTCAAGATCGATCAGCCAGAAACCGTCACCTTc   <  1:1825267/150‑1 (MQ=255)                                                                                                                                                ccGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCAGTGACCTGACCGGGCGCAGCAGCCCGCTGTCGTTCAAGCAGATTACCGAACAGGGCGCGGTGTATTACATCGCCCAGTTCAAGATCGATCAGCCAGAAACCGTCACCTTCg  >  1:153087/1‑150 (MQ=255)                                                                                                                                                |                                                                                                                                                      CCCCGAGCGCAAGGAGGTATTTGGCGACGTGACGGTGCACTACAGCGCATTCACCTCGAGCATGCTCACACCCAAGGTGGCCGCGGCCACCGGCCTGGTGCGCAGCAAGAACCAGGGCGTGCTCAACATTGCCGTGCTCAAGGCCGGCAAGCCCACCCCAGCACTGGTCAGCGGTAAGGTCAGTGACCTGACCGGGCGCAGCAGCCCGCTGTCGTTCAAGCAGATTACCGAACAGGGCGCGGTGTATTACATCGCCCAGTTCAAGATCGATCAGCCAGAAACCGTCACCTTCG  >  NC_002947/5822168‑5822460

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.