New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 596900564 (0.720)4 (0.050) 5/232 NT 5.8% coding (87/354 nt) PP_5724 hypothetical protein
?NC_002947 = 5969012 70 (0.840)coding (94/354 nt) PP_5724 hypothetical protein

AAAACAGGTAGCCGAGCTGGAAGCCCGGCTGAACCCAACTTCACAGGATGAATGAATGCAGCCCTCCAGCGCATACCCGGTACTGTTGTTTTCCTACGGCACCTTGCAGGATAAAGCCGTGCAACTGGCCAACTTTGGCCGTGAGCTGAACGGCCAGGCCGACCGTATGCCGGGCTACCGCCTGGACTGGGTCGAGATCACCGACCCGGGCGTTCTGGCGACCAGCGGCAAGTCTCATCACCCCATCGTTTCCCCCAGCAGCCAGGCCAACGACAGCGTGGCCGGCATGGTCTTCCA  >  NC_002947/5968864‑5969160
                                                                                                                                                     |                                                                                                                                                    
aaaaCAGGTAGCCGAGCTGGAAGCCCGGCTGAACCCAACTTCACAGGATGAATGAATGCAGCCCTCCAGCGCATACCCGGTACTGTTGTTTTCCTACGGCACCTTGCAGGATAAAGCCGTGCAACTGGCCAACTTTGGCCGTGAGCTGAa                                                                                                                                                     <  1:273970‑M2/150‑2 (MQ=255)
  aaCAGGTATCCGAGCTGGAAGCCCGGCTGAACCCAACTTCACAGGATGAATGAATGCAGCCCTCCAGCGCATACCCGGTACTGTTGTTTTCCTACGGCACCTTGCAGGATAAAGCCGTGCAACTGGCCAACTTTGGCCGTGAGCTGAacg                                                                                                                                                   >  1:1699178‑M2/1‑147 (MQ=255)
    cAGGTAGCCGAGCTGGAAGCCCGGCTGAACCCAACTTCACAGGATGAATGAATGCAGCCCTCCAGCGCATACCCGGTACTGTTGTTTTCCTACGGCACCTTGCAGGATAAAGCCGTGCAACTGGCCAACTTTGGCCGTGAGCTGAacggc                                                                                                                                                 >  2:2277109‑M2/1‑145 (MQ=255)
    cAGGTAGCCGAGCTGGAAGCCCGGCTGAACCCAACTTCACAGGATGAATGAATGCAGCCCTCCAGCGCATACCCGGTACTGTTGTTTTCCTACGGCACCTTGCAGGATAAAGCCGTGCAACTGGCCAACTTTGGCCGTGAGCTGAacggc                                                                                                                                                 >  2:273970‑M2/1‑145 (MQ=255)
     aGGTAGCCGAGCTGGAAGCCCGGCTGAACCCAACTTCACAGGATGAATGAATGCAGCCCTCCAGCGCATACCCGGTACTGTTGTTTTCCTACGGCACCTTGCAGGATAAAGCCGTGCAACTGGCCAACTTTGGCCGTGAGCTGAacggcc                                                                                                                                                <  1:1317867‑M2/150‑7 (MQ=255)
     aGGTAGCCGAGCTGGAAGCCCGGCTGAACCCAACTTCACAGGATGAATGAATGCAGCCCTCCAGCGCATACCCGGTACTGTTGTTTTCCTACGGCACCTTGCAGGATAAAGCCGTGCAACTGGCCAACTTTGGCCGTGAGCTGAacggcc                                                                                                                                                <  2:321147‑M2/150‑7 (MQ=255)
           ccGAGCTGGAAGCCCGGCTGAACCCAACTTCACAGGATGAATGAATGCAGCCCTCCAGCGCATACCCGGTACTGTTGTTTTCCTACGGCACCTTGCAGGATAAAGCCGTGCAACTGGCCAACTTTGGCCGTTCAGCTCAcggccaaagtt                                                                                                                                           >  2:2176479‑M2/1‑139 (MQ=255)
                 tGGAAGCCCGGCTGAACCCAACTTCACAGGATGAATGAATGCAGCCCTCCAGCGCATACCCGGTACTGTTGTTTTCCTACGGCACCTTGCAGGATAAAGCCGTGCAACTGGCCAACTTTGGCCGTGAGCTGAACGGCCAGGCCGACCGTa                                                                                                                                    <  2:2281333/150‑1 (MQ=255)
                  ggAAGCCCGGCTGAACCCAACTTCACAGGATGAATGAATGCAGCCCTCCAGCGCATACCCGGTACTGTTGTTTTCCTACGGCACCTTGCAGGATAAAGCCGTGCAACTGGCCAACTTTGGCCGTGAGCTGAACGGCCAGGCCGACCGTAt                                                                                                                                   >  2:246881/1‑150 (MQ=255)
                   gAAGCCCGGCTGAACCCAACTTCACAGGATGAATGAATGCAGCCCTCCAGCGCATACCCGGTACTGTTGTTTTCCTACGGCACCTTGCAGGATAAAGCCGTGCAACTGGCCAACTTTGGCCGTGAGCTGAACGGCCAGGCCGACCGTATg                                                                                                                                  >  2:2295737/1‑150 (MQ=255)
                   gAAGCCCGGCTGAACCCAACTTCACAGGATGAATGAATGCAGCCCTCCAGCGCATACCCGGTACTGTTGTTTTCCTACGGCACCTTGCAGGATAAAGCCGTGCAACTGGCCAACTTTGGCCGTGAGCTGAAATGCCAGGCCGACCGTATg                                                                                                                                  >  2:1159673/1‑150 (MQ=255)
                       cccGGCTGAACCCAACTTCACAGGATGAATGAATGCAGCCCTCCAGCGCATACCCGGTACTGTTGTTTTCCTACGGCACCTTGCAGGATAAAGCCGTGCAACTGGCCAACTTTGGCCGTGAGCTGAACGGCCAGGCCGACCGTATGCCgg                                                                                                                              <  2:1170230/150‑1 (MQ=255)
                       cccGGCTGAACCCAACTTCACAGGATGAATGAATGCAGCCCTCCAGCGCATACCCGGTACTGTTGTTTTCCTACGGCACCTTGCAGGATAAAGCCGTGCAACTGGCCAACTTTGGCCGTGAGCTGAACGGCCAGGCCGACCGTATGCCgg                                                                                                                              <  1:2405846/150‑1 (MQ=255)
                       cccGGCTGAACCCAACTTCACAGGATGAATGAATGCAGCCCTCCAGCGCATACCCGGTACTGTTGTTTTCCTACGGCACCTTGCAGCATAAAGCCGTGCAACTGGCCAACTTTGGCCGTGAGCTGAACGGCCAGGCCGACCGTATGCCgg                                                                                                                              <  2:1936224/150‑1 (MQ=255)
                        ccGGCTGAACCCAACTTCACAGGATGAATGAATGCAGCCCTCCAGCGCATACCCGGTACTGTTGTTTTCCTACGGCACCTTGCAGGATAAAGCCGTGCAACTGGACAACTTTGGCCGTGAGCTGAACGGCCAGGCCGACCGTATGCCggg                                                                                                                             >  1:2320752/1‑150 (MQ=255)
                               aaCCCAACTTCACAGGATGAATGAATGCAGCCCTCCAGCGCATACCCGGTACTGTTGTTTTCCTACGGCACCTTGCAGGATAAAGCCGTGCAACTGGCCAACTTTGGCCGTGAGCTGAACGGCCAGGCCGACCGTATGCCGGGCTACCGc                                                                                                                      <  1:321147/150‑1 (MQ=255)
                                   ccaCTTCACAGGATGAATGAATGCAGCCCTCCAACGCACACCCGGTACGGTTGTGTGCCTACTGCACCTGGCAGGATAAAGCCGTGCAACTGGCCAACTTTGGCCGTGAGCTGAACGGCCAGGCCGACCGTATGCCGGGCTACCGCCTgg                                                                                                                  >  2:2081782/3‑150 (MQ=255)
                                       ttCACAGGATGAATGAATGCAGCCCTCCAGCGCATACGCGTTACTGTTGTTTTCCTACGGCACCTTGCAGGATAAAGCCGTGCAACTGGCCAACTTTGGCCGTGAGCTGAACGGCCAGGCCGACCGTATGCCGGGCTACCGCCTGGACTg                                                                                                              >  1:802622/1‑150 (MQ=255)
                                       ttCACAGGATGAATGAATGCAGCCCTCCAGCGCATACCCGGTACTGTTGTTTTCCTACGGCACCTTGCAGGATAAAGCCGTGCAACTGGCCAACTTTGGCCGTGAGCTGAACGGCCAGGCCGACCGTATGCCGGGCTACCGCCTGGACTg                                                                                                              >  2:79/1‑150 (MQ=255)
                                        tCACAGGATGAATGAATGCAGCCCTCCAGCGCATACCCGGTACTGTTGTTTTCCTACGGCACCTTGCAGGATAAAGCCGTGCAACTGGCCAACTTTGGCCGTGAGCTGAACGGCCAGGCCGACCGTATGCCGGGCTACCGCCTGGACTgg                                                                                                             <  1:1660141/150‑1 (MQ=255)
                                        tCACAGGATGAATGAATGCAGCCCTCCAGCGCATACCCGGTACTGTTGTTTTCCTACGGCACCTTGCAGGATAAAGCCGTGCAACTGGCCAACTTTGGCCGTGAGCTGAACGGCCAGGCCGACCGTATGCCGGGCTACCGCCTGGACTgg                                                                                                             <  1:246881/150‑1 (MQ=255)
                                           caGGATGAATGAATGCAGCCCTCCAGCGCATACCCGGTACTGTTGTTTTCCTACGGCACCTTGCAGGATAAAGCCGTGCAACTGGCCAACTTTGGCCGTGAGCTGAACGGCCAGGCCGACCGTATGCCGGGCTACCGCCTGGACTGGGTc                                                                                                          <  1:1887958/150‑1 (MQ=255)
                                             ggATGAATGAATGCAGCCCTCCAGCGCATACCCGGTACTGTTGTTTTCCTACGGCACCTTGCAGGATAAAGCCGTGCAACTGGCCAACTTTGGCCGTGAGCTGAACGGCCAGGCCGACCGTATGCCGGGCTACCGCCTGGACTGGGTCga                                                                                                        <  2:18324/150‑1 (MQ=255)
                                              gATGAATGAATGCAGCCCTCCAGCGCATACCCGGTACTGTTGTTTTCCTACGGCACCTTGCAGGATAAAGCCGCGGAACTGGCCAACTTTGGCCGTGAACTGAACAGCCAGTCCGACCGTATGCCGGGCTACCGCCTGGACTGGGTCgag                                                                                                       >  1:542330/1‑150 (MQ=255)
                                                tgaatgaaTGCAGCCCTCCAGCGCATACCCGGTACTGTTGTTTTCCTACGGCACCTTGCAGGATAAAGCCGTGCAACTGGCCAACTTTGGCCGTTAGATGAACGGACAGGCCGACCGTATGCCGGGCTACGCTCTGGACGGGGTGGAGAt                                                                                                     >  1:1207018/1‑150 (MQ=255)
                                                tgaatgaaTGCAGCCCTCCAGCGCATACCCGGTACTGTTGTTTTCCTACGGCACCTTGCAGGATAAAGCCGTGCAACTGGCCAACTTTGGCCGTGAGCTGAACGGCCAGGCCGACCGTATGCCGGGCTACCGCCTGGACTGGGTCGAGAt                                                                                                     >  1:1169005/1‑150 (MQ=255)
                                                 gaatgaatGCAGCCCTCCAGCGCATACCCGGTACTGTTGTTTTCCTACGGCACCTTGCAGGATAAAGCCTTGCAACTGGCCAACTTTGGCCGTGAGCTGAACGGCCAGGCCGACCGTATGCCGGGCTACCGCCTGGACTGGGTCGAGATc                                                                                                    >  1:2322525/1‑150 (MQ=255)
                                                 gaatgaatGCAGCCCTCCAGCGCATACCCGGTACTGTTGTTTTCCTACGGCACCTTGCAGGATAAAGCCGTGCAACTGGCCAACTTTGGCCGTGAGCTGAACGGCCAGGCCGACCGTATGCCGGGCTACCGCCTGGACAGGGTCGAGATc                                                                                                    <  1:1322958/150‑1 (MQ=255)
                                                  aatgaatgCAGCCCTCCAGCGCATACCCGGTACTGTTGTTTTCCTACGGCACCTTGCAGGATAAAGCCGTGCAACTGGCCAACTTTGGCCGTGAGCTGAACGGCCAGGCCGACCGTATGCCGGGCTACCGCCTGGACTGGGTCGAGATCa                                                                                                   <  1:1613177/150‑1 (MQ=255)
                                                   atgaatgCAGCCCTCCAGCGCATACCCGGTACTGTTGTTTTCCTACGGCACCTTGCAGGATAAAGCCGTGCAACTGGCCAACTTTGGCCGTGAGCTGAACGGCCAGGCCGACCGTATGCCGGGCTAc                                                                                                                         >  2:817680/1‑127 (MQ=255)
                                                   atgaatgCAGCCCTCCAGCGCATACCCGGTACTGTTGTTTTCCTACGGCACCTTGCAGGATAAAGCCGTGCAACTGGCCAACTTTGGCCGTGAGCTGAACGGCCAGGCCGACCGTATGCCGGGCTAc                                                                                                                         <  1:817680/127‑1 (MQ=255)
                                                           aGCCCTCCAGCGCATACCCGGTACTGTTGTTTTCCTACGGCACCTTGCAGGATAAAGCCGTGCAACTGGCCAACTTTGGCCGTGAGCTGAACGGCCAGGCCGACCGTATGCCGGGCTACCGCCTGGACTGGGTCGAGATCACCGACCCgg                                                                                          <  1:863700/150‑1 (MQ=255)
                                                             cccTCCAGCGCATACCCGGTACTGTTGTTTTCCTACGGCACCTTGCAGGATAAAGCCGTGCAACTGGCCAACTTTGGCCGTGAGCTGAACGGCCAGTCCGACCGTATGCCGGGCTACCGCCTGGACTGGGTCGAGATCACCGACCCGGGc                                                                                        <  1:1159673/150‑1 (MQ=255)
                                                             cccTCCAGCGCATACCCGGTACTGTTGTTTTCCTACGGCACCTTGCAGGATAAAGCCGTGCAACTGGCCAACTTTGGCCGTGAGCTGAACGGCCAGGCCGACGGTATGCACGGCTACCGTCTGGACTGGGTCGAGATCACCGACCCGGGc                                                                                        >  2:147975/1‑150 (MQ=255)
                                                             cccTCCAGCGCATACCCGGTACTGTTGTTTTCCTACGGCACCTTGCAGGATAAAGCCGTGCAACTGGCCAACTTTGGCCGTGAGCTGAACGGCCAGGCCGACCGTATGCCGGGCTACCGCCTGGACTGGGTCGAGATCACCGACCCGGGc                                                                                        >  1:1193393/1‑150 (MQ=255)
                                                                   aGCGCATACCCGGTACTGTTGTTTTCCTACGGCACCTTGCAGGATAAAGCCGTGCAACTGGCCAACTTTGGCCGTGAGCTGAACGGCCAGGCCGACCGTATGCCGGGCTACCGCCTGGACTGGGTCGAGATCACCGACCCGGGCGTTCTg                                                                                  <  1:322344/150‑1 (MQ=255)
                                                                     cgcATACCCGGTACTGTTGTTTTCCTTCGGCACCTTGCAGGATAAAGCCGTGCAACTGGCCAACTTTGGCCGTGAGCTGAACGGCCAGGCCGACCGTATGCCGGGCTACCGCCTGGACTGGGTCGAGATCACCGACCCGGGCGTTCTGGc                                                                                <  1:79/150‑1 (MQ=255)
                                                                            ccGGTACTGTTGTTTTCCTACGGCACCTTGCAGGATAAAGCCGTGCAACTGGCCAACTTTGGCCGTGAGCTGAACGGCCAGGCCGACCGTATGCCGGGCTACCGCCTGGACTGGGTCGAGATCACCGACCCGGGCGTTCTGGCGACCAGc                                                                         >  1:2112290/1‑150 (MQ=255)
                                                                            ccGGTACTGTTGTTTTCCTACGGCACCTTGCAGGATAAAGCCGTGCAACTGGCCAACTTTGGCCGTGAGCTGAACGGCCAGGCCGACCGTATGCCGGGCTACCGCCTGGACTGGGTCGAGATCACCGACCCGGGCGTTCTGGCGACCAGc                                                                         >  1:2011915/1‑150 (MQ=255)
                                                                              ggTACTGTTGTTTTCCTACGGCACCTTGCAGGATAAAGCCGTGCAACTGGCCAACTTTGGCCGTGAGCTGAACGGCCAGGCCGACCGTATGCCGGGCTACCGCCTGGACTGGGTCGAGATCACCGACCCGGGCGTTCTGGCGACCAGCgg                                                                       <  1:2295737/150‑1 (MQ=255)
                                                                                   tgttgtTTTCCTACGGCACCTTGCAGGATAAAGCCGTGCAACTGGCCAACTTTGGCCGTGAGCTGAACGGCCAGGCCGACCGTATGCCGGGCTACCGCCTGGACTGGGTCGAGATCACCGACCCGGGCGTTCTGGCGACCAGCGGCAAGt                                                                  >  1:608009/1‑150 (MQ=255)
                                                                                    gttgttTTCCTACGGCACCTTGCAGGATAAAGCCGTGCAACTGGCCAACTTTGGCCGTGAGCTGAACGGCCAGGCCGACCGTATGCCGGGCTACCGCCTg                                                                                                                   <  2:43903/100‑1 (MQ=255)
                                                                                    gttgttTTCCTACGGCACCTTGCAGGATAAAGCCGTGCAACTGGCCAACTTTGGCCGTGAGCTGAACGGCCAGGCCGACCGGAGGCCGGGCTACCGCCTg                                                                                                                   >  1:43903/1‑100 (MQ=255)
                                                                                     ttgttTTCCTACGGCACCTTGCAGGATAAAGCCGTGCAACTGGCCAACTTTGGCCGTGAGCTGAACGGCCAGGCCGACCGTATGCCGGGCTACCGCCTGGACTGGGTCGAGATCAcc                                                                                                 <  1:9212/117‑1 (MQ=255)
                                                                                     ttgttTTCCTACGGCACCTTGCAGGATAAAGCCGTGCAACTGGCCAACTTTGGCCGTGAGCTGAACGGCCAGGCCGACCGTATGCCGGGCTACCGCCTGGACTGGGTCGAGATCAcc                                                                                                 >  2:9212/1‑117 (MQ=255)
                                                                                      tgttTTCCTACGGCACCTTGCAGGATAAAGCCGTGCAACTGGCCAACTTTGGCCGTGAGCTGAACGGCCAGGCCGACCGTATGCCGGGCTACCGCCTGGACTGGGTCGAGATCACCGACCCGGGCGTTCTGGCGACCAGCGGCAAGtctc                                                               <  2:1169005/150‑1 (MQ=255)
                                                                                             cTACGGCACCTTGCAGGATAAAGCCGTGCAACTGGCCAACTTTGGCCGTTCAGCTCAcggccaaagtt                                                                                                                                           <  1:470118‑M2/68‑12 (MQ=255)
                                                                                             cTACGGCACCTTGCAGGATAAAGCCGTGCAACTGGCCAACTTTGGCCGTTCAGCTCAcggccaaagtt                                                                                                                                           >  2:470118‑M2/1‑57 (MQ=255)
                                                                                             cTACGGCACCTTGCAGGATAAAGCCGTGCAACTGGCCAACTTTGGCCGTGAGCTGAACGGCCAGGCCGACCGTATGCCGGGCTACCGCCTGGGCTGGGTCGAGATCACCGACCCGTTCTTACGAGCTACCAGCGGCAAGTCtcctcaaaa                                                        >  2:1000098/1‑147 (MQ=255)
                                                                                              tACGGCACCTTGCAGGATAAAGCCGTGCAACTGGCCAACTTTGGCCGTGAGCTGAACGGCCAGGCCGACCGTATGCCGGGCTACCGCCTGGACTGGGTCGAGATCACCGACCCGGGCGTTCTGGCGACCAGCGGCAAGTCTCATCAcccc                                                       >  2:2381886/1‑150 (MQ=255)
                                                                                              tACGGCACCCTGCAGGATAAAGCCGTGCAACTGACCAACTTTGGCAGTGAGTTGAACGGCGAGGTCGACCGTATGCCGGGCTACCGCCTGGACTGGGTCGAGATCACCGACCCGGGCGTTCTGGCGACCAGCGGCAAGTCTCATCAcccc                                                       <  2:1207018/150‑1 (MQ=255)
                                                                                                  gCACCTTGCAGGATAAAGCCGTGCAACTGGCCAACTTTGGCCGTGAGCTGAACGGCCAGGCCGACCGTATGCCGGGCTACCGCCTGGACTGGGTCGAGATCACCGACCCGGGCGTTCTGGCGACCAGCGGCAAGTCTCATCACCCCATCg                                                   >  1:2369007/1‑150 (MQ=255)
                                                                                                   cACCTTGCAGGATAAAGCCGTGCAACTGGCCAACTTTGGCCGTGAGCTGAACGGCCAGGCCGACCGTATGCCGGGCTACCGCCTGGACTGGGTCGAGATCACCGACCCGGGCGTTCTGGCGACCAGCGGCAAGTCTCATCACCCCATCGt                                                  >  2:1247996/1‑150 (MQ=255)
                                                                                                     ccTTGCAGGATAAAGCCGTGCAACTGGCCAACTTTGGCCGTGAGCTGAACGGCCAGGCCGACCGTATGCCGGGCTACCGCCTGGACTGGGTCGAGATCACCGACCCGGGCGTTCTGGCGACCAGCGGCAAGTCTCATCACCCCATCGttt                                                <  1:1121278/150‑1 (MQ=255)
                                                                                                      cTTGCAGGATAAAGCCGTGCAACTGGCCAACTTTGGCCGTGAGCTGAACGGCCAGGCCGACCGTATGCCGGGCTACCGCCTGGACTGGGTCGAGATCACCGACCCGGGCGTTCTGGCGACCAGCGGCAAGTCTCATCACCCCATCGTTTc                                               <  2:2011915/150‑1 (MQ=255)
                                                                                                           aGGATAAAGCCGTGCAACTGGCCAACTTTGGCCGTGAGCTGAACGGCCAGGCCGACCGTATGCCGGGCTACCGCCTGGACTGGGTCGAGATCACCGACCCGGGCGTTCTGGCGACCAGCGGCAAGTCTCATCACCCCATCGTTTCCCCca                                          >  1:1433187/1‑150 (MQ=255)
                                                                                                           aGGATAAAGCCGTGCAACTGGCCAACTTTGGCCGTGAGCTGAACGGCCAGGCCGACCGTATGCCGGGCTACCGCCTGGACTGGGTCGAGATCACCGACCCGGGCGTTCTGGCGACCAGCGGCAAGTCTCATCACCCCATCGTTTCCCCca                                          <  1:2081782/150‑1 (MQ=255)
                                                                                                             gagaaggCCGTGCAACGGGGCAACGTTGGCCGTGAGCTGAACGGCCAGGCCGACCGTATGCCGGGCTACCGCCTGGACTGGGTCGAGATCACCGACCCGGGCGTTCTGGCGACCAGCGGCAAGTCTCATCACCCCATCGTTTCCCCcagc                                        >  2:1843126/7‑150 (MQ=255)
                                                                                                                  aGCCGTGCAACTGGCCAACTTTGGCCGTGAGCTGAACGGCCAGGCCGACCGTATGCCGGGCTACCGCCTGGACTGGGTCGAGATCACCGACCCGGGCGTTCTGGCGACCAGCGGCAAGTCTCATCACCCCATCGTTTCCCCCAGCAGccc                                   >  2:1804842/1‑149 (MQ=255)
                                                                                                                  aGCCGTGCAACTGGCCAACTTTGGCCGTGAGCTGAACGGCCAGGACGACCGTATGCCGGGCTACCGCCTGGACTGGGTCGAGATGACCGACCCGGGCGTTCTGGCGACCAGCGGCAAGTCTCATCACCCCATCGTTTCCCCCAGCAGCCa                                   <  2:1734802/150‑1 (MQ=255)
                                                                                                                   gCCGTGCAACTGGCCAACTTTGGCCGTGAGCTGAACGGCCAGGCCGACCGTATGCCGGGCTACCGCCTGGACTGGGTCGAGATCACCGACCCGGGCGTTCTGGCGACCAGCGGCAAGtc                                                                 >  1:2265347/1‑119 (MQ=255)
                                                                                                                   gCCGTGCAACTGGCCAACTTTGGCCGTGAGCTGAACGGCCAGGCCGACCGTATGCCGGGCTACCGCCTGGACTGGGTCGAGATCACCGACCCGGGCGTTCTGGCGACCAGCGGCAAGtc                                                                 <  2:2265347/119‑1 (MQ=255)
                                                                                                                       tGCAACTGGCCAACTTTGGCCGTGAGCTGAACGGCCAGGCCGACCGTATGCCGGGCTACCGCCTGGACTGGGTCGAGATCACCGACCCGGGCGTTCTGGCGACCAGCGGCAAGTCTCATCACCCCATCGTTTCCCCCAGCAGCCAGGCCa                              >  2:1642144/1‑150 (MQ=255)
                                                                                                                       tGCAACTGGCCAACTTTGGCCGTGAGCTGAACGCCGAGGCCGACCGTATGCCGGGCTACCGCCTGGACTGGGTCGAGATCACCGACCCGGGCGTTCTGGCGACCAGCGGCAAGTCTCATCACCCCATCGTTTCCCCCAGCAGCCAGGCCa                              >  1:804246/1‑150 (MQ=255)
                                                                                                                        gCAACTGGCCAACTTTGGCCGTGAGCTGAACGGCACTCTTTACCGTATGCCGGGCTACCGCCTGGACTGGGTCGAGATCACCGACCCGGGCGTTCTGGCGACCAGCGGCAAGTCTCATCACCCCATCGTTTCCCCCAGCAGCCAGGCCaa                             <  2:804246/150‑1 (MQ=255)
                                                                                                                         cAACTGGGCAACTTTGGCCGTGAGCTGAACGGCCAGGCCGACCGTATGCCGGGCTACCGCCTGGACTGGGTCGAGATCACCGACCCGGGCGTTCTGGCGACCAGCGCCAAGTCTCATCCCCCCATCGTTTCCCCCAGCAGCCAGGCCAAc                            <  2:1747316/150‑1 (MQ=255)
                                                                                                                         cAACTGGCCAACTTTGGCCGTGAGCTGAACGGCCAGGCCGACCGTATGCCGGGCTACCGCCTGGACTGGGTCGAGATCACCGACCCGGGCGTTCTGGCGACCAGCGGCAAGTCTCATCACCCCATCGTTTCCCCCAGCAGCCAGGCCAAc                            <  2:542330/150‑1 (MQ=255)
                                                                                                                         cAACTGGCCAACTTTGGCCGTGAGCTGAACGGCCAGGCCGACCGTATGCCGGGCTACCACCTGGACTGGGTCGAGATCACCGACCCGGGCGTTCTGGCGACCAGCGGCAAGTCTCATCACCCCATCGTTTCCCCCAGCAGCCAGGCCAAc                            <  2:1317867/150‑1 (MQ=255)
                                                                                                                               gCCAACTCTCGCGGTGAGCTGAACGTCCAGGCCGACCGTATGCCGGGCTACCGCCTGGACTGGGTCGAGATCACCGACCCGGGCGTTCTGGCGACCAGCGGCAAGTCTCATCACCCCATCGTTTCCCCCAGCAGCCAGGCCAACGACAGc                      >  2:1955188/1‑150 (MQ=255)
                                                                                                                                 cAACTTTGGCCGTGAGCTGAACGGCCAGGCCGACCGTATGCCGGGCTACCGCCTGGACTGGGTCga                                                                                                        >  2:487685/1‑66 (MQ=255)
                                                                                                                                 cAACTTTGGCCGTGAGCTGAACGGCCAGGCCGACCGTATGCCGGGCTACCGCCTGGACTGGGTCga                                                                                                        <  1:487685/66‑1 (MQ=255)
                                                                                                                                    cTTTGGCCGTGAGCTGAacggccaaagttggccagttgcacggctttatcctgcaaggtgccgtaggaaaacaac                                                                                            >  2:231941‑M2/1‑17 (MQ=255)
                                                                                                                                    cTTTGGCCGTGAGCTGAacggccaaagttggccagttgcacggctttatcctgcaaggtgccgtaggaaaacaac                                                                                            <  1:231941‑M2/75‑59 (MQ=255)
                                                                                                                                     tttGGCCGTGAGCTGAacggccaaagttggccagttgcacggctttatcctgcaaggtgccgtaggaaaacaacagtaccgggtatgcgctggagggctgcattcattcatcctgtgaagttgggttcagccgggcttccagctcggcta                <  1:2005801‑M2/150‑135 (MQ=255)
                                                                                                                                     tttGGCCGTGAGCTGAACGGCCAGGCCGACCGTATGCCGGGCTACCGCCTGGACTGGGTCGAGATCACCGACCCGGGCGTTCTGGCGACCAGCGGCAAGTCTCATCACCCCATCGTTTCCCCCAGCAGCCAGGCCAAc                            >  2:669193/1‑138 (MQ=255)
                                                                                                                                     tttGGCCGTGAGCTGAACGGCCAGGCCGACCGTATGCCGGGCTACCGCCTGGACTGGGTCGAGATCACCGACCCGGGCGTTCTGGCGACCAGCGGCAAGTCTCATCACCCCATCGTTTCCCCCAGCAGCCAGGCCAAc                            <  1:669193/138‑1 (MQ=255)
                                                                                                                                     tttCGCCGTGAGATGAacggccaaagttggccagttgcacggctttatcctgcaaggtgccgtaggaaaacaacagtaccgggtatgcgctggagggctgcattcattcatcctgtgaagttgggttcagccgggcttccagctcggcta                <  2:2088727‑M2/150‑135 (MQ=255)
                                                                                                                                         gCCGTGAGCTGAACGGCCAGGCCGACCGTATGCCGGGCTACCGCCTGGACTGGGTCGAGATCACCGACCCGGGCGTTCTGGCGACCAGCGGCAAGTCtca                                                              >  1:1468071/1‑100 (MQ=255)
                                                                                                                                         gCCGTGAGCTGAACGGCCAGGCCGACCGTATGCCGGGCTACCGCCTGGACTGGGTCGAGATCACCGACCCGGGCGTTCTGGCGACCAGCGGCAAGTCtca                                                              <  2:1468071/100‑1 (MQ=255)
                                                                                                                                         gCCGTGAGCTGAACGGCCAGGCCGACCGTATGCCGGGCTACCGCCTGGACTGGGTCGAGATCACCGACCCGGGCGTTCTGGCGACCAGCGGCAAGTCTCATCACCCCATCGTTTCCCCCAGCAGCCAGGCCAACGACAGCGTGGCCGGCa            <  2:2246569/150‑1 (MQ=255)
                                                                                                                                          ccGTGAGCTGAACGGCCAGGCCGACCGTATGCCGGGCTACCGCCTGGACTGGGTCGAGATCACCGACCCgg                                                                                          >  2:331716/1‑71 (MQ=255)
                                                                                                                                          ccGTGAGCTGAACGGCCAGGCCGACCGTATGCCGGGCTACCGCCTGGACTGGGTCGAGATCACCGACCCgg                                                                                          <  1:331716/71‑1 (MQ=255)
                                                                                                                                           cGTGAGCTGAACGGCCAGGCCGACCGTATGCCGGGCTACCGCCTGGACTGGGTCGAGATCACCGACCCGGGCGTTCTGGCGACCAGCGGCAAGTCTCATCACCCCATCGTTTCCCCCAGCAGCCAGGCCAACGACAGCGTGGCCGGCATg          <  2:29018/150‑1 (MQ=255)
                                                                                                                                                   tGAACGGCCAGGCCGACCGTATGCCGGGCTACCGCCTGGACTGGGTCGAGATCACCGACCCGGGCGTTCTGGCGACCAGCGGCAAGTCTCATCACCCAATCGTTTCCCCCAGCAGCCAGGCCAACGACAGCGTGGCCGGCATGGTCTTcc   <  1:1642144/150‑1 (MQ=255)
                                                                                                                                                    gAACGGCCAGGCCGACCGTATGCCGGGCTACCGCCTGGACTGGGTCGAGATCACCGACCCGGGCGTTCTGGCGACCAGCGGCAAGTCTCATCACCCCATCGTTTCCCCCAGCAGCCAGGCCAACGACAGCGTGGCCGGCATGGt        <  1:992102/144‑1 (MQ=255)
                                                                                                                                                    gAACGGCCAGGCCGACCGTATGCCGGGCTACCGCCTGGACTGGGTCGAGATCACCGACCCGGGCGTTCTGGCGACCAGCGGCAAGTCTCATCACCCCATCGTTTCCCCCAGCAGCCAGGCCAACGACAGCGTGGCCGGCATGGt        >  2:992102/1‑144 (MQ=255)
                                                                                                                                                    gAACGGCCAGGCCGACCGTATGCCGGGCTACCGCCTGGACTGGGTCGAGATCACCGACCCGGGCGTTCTGGCGACCAGCGGCAAGTCTCATCACCCCATCGTTTCCCCCAGCAGCCAGGCCAACGACAGCGTGGCCGGCATGGTCTTCCa  <  1:874163/150‑1 (MQ=255)
                                                                                                                                                    gAACGGCCAGGCCGACCGTATGCCGGGCTACCGCCTGGACTGGGTCGAGATCACCGACCCGGGCGTTCTGGCGACCAGCGGCAAGTCTCATCACCCCATCGTTTCCCCCAGCAGCCAGGCCAACGACAGCGTGGCCGGCATGGTCTTCCa  >  2:161250/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                    
AAAACAGGTAGCCGAGCTGGAAGCCCGGCTGAACCCAACTTCACAGGATGAATGAATGCAGCCCTCCAGCGCATACCCGGTACTGTTGTTTTCCTACGGCACCTTGCAGGATAAAGCCGTGCAACTGGCCAACTTTGGCCGTGAGCTGAACGGCCAGGCCGACCGTATGCCGGGCTACCGCCTGGACTGGGTCGAGATCACCGACCCGGGCGTTCTGGCGACCAGCGGCAAGTCTCATCACCCCATCGTTTCCCCCAGCAGCCAGGCCAACGACAGCGTGGCCGGCATGGTCTTCCA  >  NC_002947/5968864‑5969160

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.