| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 6009165 = | 34 (0.380) | 13 (0.200) | 11/180 | NT | 50.2% | intergenic (+6/+76) | norM/PP_5263 | multidrug resistance protein NorM/GGDEF domain‑containing protein |
| ? | NC_002947 | 6009242 = | 1 (0.020) | coding (1667/1668 nt) | PP_5263 | GGDEF domain‑containing protein | |||||
TCTTCGCGGGCACGCCCGCTCCCACAGGATTGCGCGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGCCTTGCACCTGGTCGCAGCCAAACCCGCGCAACAACGTCAGCTGCTCTTCACTCTCCACA > NC_002947/6009170‑6009388 | TCTTCGCGGGCACGCCCGCTCCCACAGGATTGCGCGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATc > 1:1473214‑M1/1‑123 (MQ=255)TCTTCGCGGGCACGCCCGCTCCCACAGGATTGCGCGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATc < 2:1473214‑M1/123‑1 (MQ=255) GGGCACGCCCGCTCCCACAGGATTGCGCGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAg < 2:1442211‑M1/70‑1 (MQ=255) GGGCACGCCCGCTCCCACAGGATTGCGCGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAg > 1:1442211‑M1/1‑70 (MQ=255) GGGCACGCCCGCTCCCACAGGATTGCGCGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGa < 1:1031613‑M1/150‑1 (MQ=255) GCACGCCCGCTCCCACAGGATTGCGCGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAg < 1:198769‑M1/150‑1 (MQ=255) ACGCCCGCTCCCACAGGATTGCGCGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGc > 2:2152429‑M1/1‑108 (MQ=255) ACGCCCGCTCCCACAGGATTGCGCGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGc < 1:2152429‑M1/108‑1 (MQ=255) cccgctcccacagggaccgcgcaatcctgtgggagcgggcgtgcccgcgaagaggcccTAAAGGACACCCTCCAACTGGCGGCCAGgc > 2:1446696‑M2/59‑88 (MQ=255) cccgctcccacagggaccgcgcaatcctgtgggagcgggcgtgcccgcgaagaggcccTAAAGGACACCCTCCAACTGGCGGCCAGgc < 1:1446696‑M2/30‑1 (MQ=255) gctcccacagggaccgcgcaatcctgtgggagcgggcgtgcccgcgaagaggcccTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCgg < 1:1858970‑M2/71‑1 (MQ=255) gctcccacagggaccgcgcaatcctgtgggagcgggcgtgcccgcgaagaggcccTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCgg > 2:1858970‑M2/56‑126 (MQ=255) tcccacagggaccgcgcaatcctgtgggagcgggcgtgcccgcgaagaggcccTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGc < 1:1873937‑M2/88‑1 (MQ=255) tcccacagggaccgcgcaatcctgtgggagcgggcgtgcccgcgaagaggcccTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGc > 2:1873937‑M2/54‑141 (MQ=255) ccacagggaccgtgcaatcctgtgggagcgggcgtgcccgcgaagaggcccTAAAGGaca > 2:638745‑M2/52‑60 (MQ=255) ccacagggaccgtgcaatcctgtgggagcgggcgtgcccgcgaagaggcccTAAAGGaca < 1:638745‑M2/9‑1 (MQ=255) ccacagggaccgcgcaatcctgtgggagcgggcgtgcccgcgaagaggcccTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTgca > 2:770013‑M2/52‑88 (MQ=255) ccacagggaccgcgcaatcctgtgggagcgggcgtgcccgcgaagaggcccTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTgca < 1:770013‑M2/37‑1 (MQ=255) ccacagggaccgcgcaatcctgtgggagcgggcgtgcccgcgaagaggcccTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGCCTTGCACCTgg > 1:1637248‑M2/52‑150 (MQ=255) CCACAGGATTGCGCGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGCCTTGCACCTgg < 1:500673‑M1/150‑1 (MQ=255) CACAGGATTGCGCGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAAt < 1:1489303‑M1/104‑1 (MQ=255) CACAGGATTGCGCGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAAt > 2:1489303‑M1/1‑104 (MQ=255) CACAGGATTGCGCGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGCCTTGCACCTGGt < 1:1097078‑M1/150‑1 (MQ=255) CACAGGATTGCGCGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCCCCAACTGGCGGCCAGGCGCTTGCAGCAAACACGCCAGCAATGCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGCCTTGCACCTGGt < 1:42991‑M1/150‑1 (MQ=255) ACAGGATTGCGCGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGCCTTGCACCTGGTc < 2:1885751‑M1/150‑1 (MQ=255) ACAGGATTGCGCGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGCCTTGCACCTGGTc < 2:313610‑M1/150‑1 (MQ=255) CAGGATTGCGCGGTGCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCACCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGATGCCTTGCACCTGGTCg < 2:297520‑M1/150‑1 (MQ=255) agggaccgcgcaatcgtgtgggagcgggcgtgcccgcgaagaggcccTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATc > 2:888324‑M2/48‑110 (MQ=255) agggaccgcgcaatcctgtgggagcgggcgtgcccgcgaagaggcccTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATc < 1:888324‑M2/63‑1 (MQ=255) cgcgGTCCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCAATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGCCTTGCACCTGGTCGCAGCCaaa < 2:1097078/150‑1 (MQ=255) cctgtgggagcgggcgtgcccgcgaagaggcccTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCt > 2:705‑M2/34‑67 (MQ=255) cctgtgggagcgggcgtgcccgcgaagaggcccTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCt < 1:705‑M2/34‑1 (MQ=255) cctgtgggagcgggcgtgcccgcgaagaggcccTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCg < 1:2142201‑M2/70‑1 (MQ=255) cctgtgggagcgggcgtgcccgcgaagaggcccTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCg > 2:2142201‑M2/34‑103 (MQ=255) cctgtgggagcgggcgtgcccgcgaagaggccaTACAGAACACCCCCTAAACGGTGGCCAGGCGCCTGCATTAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGCCTTGCACCTGGTCGCAGCCAAACCCgcgc > 1:420817‑M2/34‑150 (MQ=255) tgggagcgggcgtgcccgcgaagaggcccTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGCCTTGCACCTGGTCGCAGCCAAACCCGCGcaaca > 1:1778113‑M2/30‑150 (MQ=255) ggagcgggcgtgcccgcgaagaggcccTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCgg < 2:2165579‑M2/65‑1 (MQ=255) ggagcgggcgtgcccgcgaagaggcccTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCgg < 2:964484‑M2/65‑1 (MQ=255) ggagcgggcgtgcccgcgaagaggcccTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCgg > 1:964484‑M2/28‑92 (MQ=255) ggagcgggcgtgcccgcgaagaggcccTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCgg > 1:2165579‑M2/28‑92 (MQ=255) ggagcgggcgtgcccgcgaagaggcccTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGCCTTGCACCTGGTCGCAGCCAAACCCGCGCaacaac < 2:198769‑M2/123‑1 (MQ=255) ggagcgggcgtgcccgcgaagaggcccTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGCCTTGCACCTGGTCGCAGCCAAACCCGCGCaacaac < 1:313610‑M2/123‑1 (MQ=255) cgggcgtgcccgcgaagaggcccTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGCCTTGCACCTGGTCGCAGCCAAACCCGCGCAACAACGTCa > 2:2288195‑M2/24‑150 (MQ=255) gcccgcgaagaggcccTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGCCTTGCACCTGGTCGCAGCCAAACCCGCGCAACAACGTCAGCTGctc < 2:1637248‑M2/134‑1 (MQ=255) ccgcgaagaggcccTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGCCTTGCACCTGGTCGCAGCCAAACCCGCGCAACAACGTCAGCTGCTCtt < 1:1885751‑M2/136‑1 (MQ=255) gcgaagaggcccTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGCCTTGCACCTGGTCGCAGCCAAACCCGCGCAACAACGTCAGCTGCTCTTCa < 2:1778113‑M2/138‑1 (MQ=255) gcgaagaggcccTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGCCTTGCACCTGGTCGCAGCCAAACCCGCGCAACAACGTCAGCTGCTCTTCa > 2:842514‑M2/13‑150 (MQ=255) aagaggcccTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCa > 2:1580496‑M2/10‑91 (MQ=255) aagaggcccTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCa < 1:1580496‑M2/82‑1 (MQ=255) gcccTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGcc < 1:1651855‑M2/89‑1 (MQ=255) gcccTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGCCTTGCACCTGGTCGCAGCCAAACCcg > 2:717476‑M2/5‑118 (MQ=255) gcccTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGCCTTGCACCTGGTCGCAGCCAAACCcg < 1:717476‑M2/114‑1 (MQ=255) gcccTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACAAGGAAGcc > 2:1651855‑M2/5‑93 (MQ=255) cccTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGCCTTGCACCTGGTCGCAGCCAAACCCGCGCAACGACGTCAGCTGCTCTTGACTCTCcaca > 2:2297903‑M2/4‑150 (MQ=255) tAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTctgc < 2:2402586/76‑1 (MQ=255) | TCTTCGCGGGCACGCCCGCTCCCACAGGATTGCGCGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGCCTTGCACCTGGTCGCAGCCAAACCCGCGCAACAACGTCAGCTGCTCTTCACTCTCCACA > NC_002947/6009170‑6009388 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |