mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 162 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 6174834 = | 128 (1.450) | 4 (0.050) | 4/238 | NT | 3.3% | coding (399/420 nt) | atpC | ATP synthase subunit epsilon |
| ? | NC_002947 | 6174870 = | 114 (1.330) | coding (363/420 nt) | atpC | ATP synthase subunit epsilon | |||||
| * | ? | NC_002947 | = 6079681 | 91 (1.030) | 3 (0.040) | 5/232 | NT | 3.3% | coding (39/399 nt) | PP_5331 | acyl‑CoA thioesterase |
| ? | NC_002947 | = 6079687 | 88 (1.050) | coding (45/399 nt) | PP_5331 | acyl‑CoA thioesterase | |||||
| * | ? | NC_002947 | = 5976471 | 85 (0.960) | 4 (0.050) | 4/236 | NT | 4.6% | coding (216/1491 nt) | yifB | ATP‑dependent chelatase |
| ? | NC_002947 | = 5976486 | 84 (0.990) | coding (231/1491 nt) | yifB | ATP‑dependent chelatase | |||||
| * | ? | NC_002947 | 5927991 = | 117 (1.320) | 4 (0.060) | 4/200 | NT | 4.6% | intergenic (‑41/+112) | PP_5195/fbpA | iron ABC transporter permease/iron ABC transporter substrate‑binding protein |
| ? | NC_002947 | 5928065 = | 70 (0.970) | intergenic (‑115/+38) | PP_5195/fbpA | iron ABC transporter permease/iron ABC transporter substrate‑binding protein | |||||
| * | ? | NC_002947 | = 5873258 | 82 (0.930) | 4 (0.050) | 4/232 | NT | 4.8% | intergenic (‑48/‑94) | rppH/PP_5147 | RNA pyrophosphohydrolase/haloacid dehalogenase‑like family hydrolase |
| ? | NC_002947 | = 5873279 | 83 (0.990) | intergenic (‑69/‑73) | rppH/PP_5147 | RNA pyrophosphohydrolase/haloacid dehalogenase‑like family hydrolase | |||||
| * | ? | NC_002947 | = 5864480 | 109 (1.230) | 5 (0.060) | 4/230 | NT | 4.7% | coding (1727/2253 nt) | cadA‑III | cadmium translocating P‑type ATPase |
| ? | NC_002947 | = 5864515 | 100 (1.210) | coding (1692/2253 nt) | cadA‑III | cadmium translocating P‑type ATPase | |||||
| * | ? | NC_002947 | = 5854430 | 106 (1.200) | 5 (0.060) | 5/236 | NT | 4.9% | coding (394/1392 nt) | tcyP | sodium/cystine symporter |
| ? | NC_002947 | = 5854449 | 94 (1.110) | coding (413/1392 nt) | tcyP | sodium/cystine symporter | |||||
| * | ? | NC_002947 | = 5803716 | 84 (0.950) | 4 (0.050) | 4/230 | NT | 4.9% | coding (138/1017 nt) | PP_5081 | type IV pili biogenesis protein |
| ? | NC_002947 | = 5803732 | 78 (0.940) | coding (122/1017 nt) | PP_5081 | type IV pili biogenesis protein | |||||
| * | ? | NC_002947 | 5789244 = | 116 (1.310) | 5 (0.060) | 5/234 | NT | 4.5% | coding (345/1278 nt) | ynfM | efflux transporter |
| ? | NC_002947 | 5789276 = | 101 (1.200) | coding (377/1278 nt) | ynfM | efflux transporter | |||||
| * | ? | NC_002947 | = 5732119 | 96 (1.080) | 4 (0.050) | 4/236 | NT | 4.0% | coding (493/1206 nt) | hutI | imidazolonepropionase |
| ? | NC_002947 | = 5732156 | 101 (1.190) | coding (456/1206 nt) | hutI | imidazolonepropionase | |||||