breseq  version 0.33.1  revision 8505477f25b3 mutation predictions | marginal predictions | summary statistics | genome diff | command line log

Predicted mutations
evidence	position	mutation	freq	annotation	gene	description
RA	1,699	G→T	7.2%	P41Q (CCG→CAG)	parA ←	chromosome partition protein
RA	1,706	G→C	7.8%	L39V (CTC→GTC)	parA ←	chromosome partition protein
RA	1,707	G→C	7.8%	D38E (GAC→GAG)	parA ←	chromosome partition protein
RA	6,332	C→A	12.5%	R17R (CGG→CGT)	trmE ←	GTPase
RA	6,339	T→A	13.5%	Q15L (CAG→CTG)	trmE ←	GTPase
RA	6,346	T→G	11.0%	T13P (ACG→CCG)	trmE ←	GTPase
RA	12,143	T→C	6.2%	S347S (AGT→AGC)	dnaN →	DNA polymerase III subunit beta
RA	12,146	G→A	6.4%	A348A (GCG→GCA)	dnaN →	DNA polymerase III subunit beta
RA	26,837:1	+A	8.9%	intergenic (+33/+152)	PP_0021 → / ← PP_0022	hypothetical protein/hypothetical protein
RA	26,844	A→T	11.2%	intergenic (+40/+145)	PP_0021 → / ← PP_0022	hypothetical protein/hypothetical protein
RA	27,581	C→T	8.4%	intergenic (‑428/+18)	PP_0022 ← / ← PP_0023	hypothetical protein/hypothetical protein
RA	27,584	A→G	8.4%	intergenic (‑431/+15)	PP_0022 ← / ← PP_0023	hypothetical protein/hypothetical protein
RA	31,611	G→A	6.5%	V70I (GTC→ATC) ‡	PP_0027 →	membrane protein
RA	31,612	T→C	7.3%	V70A (GTC→GCC) ‡	PP_0027 →	membrane protein
RA	35,009	A→G	8.8%	intergenic (+27/+31)	czrSA → / ← PP_0031	metal‑sensor histidine kinase/hypothetical protein
RA	35,012	C→T	8.4%	intergenic (+30/+28)	czrSA → / ← PP_0031	metal‑sensor histidine kinase/hypothetical protein
RA	36,169	G→T	10.1%	intergenic (+54/+29)	PP_0032 → / ← PP_0033	hypothetical protein/undecaprenyl‑glycosyl transferase
RA	36,171	A→T	10.2%	intergenic (+56/+27)	PP_0032 → / ← PP_0033	hypothetical protein/undecaprenyl‑glycosyl transferase
RA	36,172	A→T	10.2%	intergenic (+57/+26)	PP_0032 → / ← PP_0033	hypothetical protein/undecaprenyl‑glycosyl transferase
RA	36,174	A→C	10.4%	intergenic (+59/+24)	PP_0032 → / ← PP_0033	hypothetical protein/undecaprenyl‑glycosyl transferase
RA	45,680	C→G	12.6%	intergenic (‑156/+47)	cadA‑I ← / ← PP_0042	cadmium translocating P‑type ATPase/hypothetical protein
RA	47,139	Δ1 bp	5.7%	coding (2236/3162 nt)	czcA‑I ←	cation efflux system protein
RA	47,142:1	+G	5.8%	coding (2233/3162 nt)	czcA‑I ←	cation efflux system protein
RA	48,872	T→G	8.4%	D168A (GAC→GCC) ‡	czcA‑I ←	cation efflux system protein
RA	48,873	C→A	7.9%	D168Y (GAC→TAC) ‡	czcA‑I ←	cation efflux system protein
RA	58,747	T→A	7.5%	intergenic (‑658/+30)	PP_5424 ← / ← PP_0050	hypothetical protein/hypothetical protein
RA	58,750	T→A	8.5%	intergenic (‑661/+27)	PP_5424 ← / ← PP_0050	hypothetical protein/hypothetical protein
RA	68,340	G→T	5.3%	intergenic (+28/+147)	PP_0057 → / ← PP_0058	major facilitator family transporter/1‑acyl‑sn‑glycerol‑3‑phosphate acyltransferase
RA	68,591	T→C	5.5%	I228V (ATT→GTT)	PP_0058 ←	1‑acyl‑sn‑glycerol‑3‑phosphate acyltransferase
RA	68,598	T→G	8.1%	P225P (CCA→CCC)	PP_0058 ←	1‑acyl‑sn‑glycerol‑3‑phosphate acyltransferase
RA	68,603	C→A	7.5%	G224W (GGG→TGG)	PP_0058 ←	1‑acyl‑sn‑glycerol‑3‑phosphate acyltransferase
RA	68,610	G→A	5.5%	N221N (AAC→AAT)	PP_0058 ←	1‑acyl‑sn‑glycerol‑3‑phosphate acyltransferase
RA	69,705	C→T	5.1%	V48M (GTG→ATG)	gmhB ←	D‑glycero‑beta‑D‑manno‑heptose‑1,7‑bisphosphate 7‑phosphatase
RA	73,985	G→T	7.3%	R154L (CGC→CTC)	PP_0063 →	lipid A biosynthesis lauroyl acyltransferase
RA	77,500	A→T	10.4%	L15H (CTC→CAC)	rsmB ←	ribosomal RNA small subunit methyltransferase B
RA	77,503	A→T	10.4%	V14E (GTG→GAG)	rsmB ←	ribosomal RNA small subunit methyltransferase B
RA	86,245	A→C	5.1%	M158R (ATG→AGG)	PP_0075 ←	choline sulfate transporter
RA	87,956	G→C	5.2%	R454R (CGC→CGG)	betC ←	choline‑sulfatase
RA	96,131	Δ1 bp	8.5%	coding (554/1005 nt)	PP_0088 ←	alkanal monooxygenase
RA	96,134:1	+G	8.7%	coding (551/1005 nt)	PP_0088 ←	alkanal monooxygenase
RA	99,268	A→G	5.8%	R232G (AGG→GGG)	PP_0093 →	zinc protease
RA	115,916	T→C	5.8%	I73I (ATT→ATC)	PP_0110 →	CyoE‑like protoheme IX farnesyltransferase
RA	115,917	G→A	5.8%	D74N (GAT→AAT)	PP_0110 →	CyoE‑like protoheme IX farnesyltransferase
RA	115,951	T→G	6.7%	L85W (TTG→TGG)	PP_0110 →	CyoE‑like protoheme IX farnesyltransferase
RA	115,956	C→A	5.8%	Q87K (CAA→AAA)	PP_0110 →	CyoE‑like protoheme IX farnesyltransferase
RA	118,131	A→T	7.9%	intergenic (‑47/+18)	metQ ← / ← metI	methionine ABC transporter substrate‑binding protein/ABC transporter permease
RA	126,115	A→G	9.3%	intergenic (+25/+25)	PP_0120 → / ← thrB	zinc ABC transporter/homoserine kinase
RA	126,116	C→T	9.2%	intergenic (+26/+24)	PP_0120 → / ← thrB	zinc ABC transporter/homoserine kinase
RA	129,654	T→A	5.7%	L711Q (CTG→CAG)	polA →	DNA polymerase I
RA	129,658	T→A	5.5%	H712Q (CAT→CAA)	polA →	DNA polymerase I
RA	146,127	T→A	13.2%	intergenic (+32/‑116)	gltP → / → PP_0138	glutamate/aspartate‑proton DAACS transporter/membrane protein
RA	146,128	T→A	13.2%	intergenic (+33/‑115)	gltP → / → PP_0138	glutamate/aspartate‑proton DAACS transporter/membrane protein
RA	151,062	T→C	5.7%	intergenic (‑113/+19)	PP_0142 ← / ← PP_0143	ABC transporter permease/membrane protein
RA	151,065	T→A	5.7%	intergenic (‑116/+16)	PP_0142 ← / ← PP_0143	ABC transporter permease/membrane protein
RA	151,068	G→A	5.5%	intergenic (‑119/+13)	PP_0142 ← / ← PP_0143	ABC transporter permease/membrane protein
RA	155,546	A→C	5.4%	intergenic (‑251/+32)	yjbB ← / ← ygdQ	Na+/Pi‑cotransporter/transport protein
RA	162,281	A→T	10.4%	intergenic (‑315/+59)	PP_0153 ← / ← scpC	hypothetical protein/propionyl‑CoA:succinate CoA transferase
RA	162,282	A→T	9.8%	intergenic (‑316/+58)	PP_0153 ← / ← scpC	hypothetical protein/propionyl‑CoA:succinate CoA transferase
RA	162,292	G→T	5.1%	intergenic (‑326/+48)	PP_0153 ← / ← scpC	hypothetical protein/propionyl‑CoA:succinate CoA transferase
RA	164,458	C→G	7.5%	A333A (GCG→GCC)	pntB ←	pyridine nucleotide transhydrogenase subunit beta
RA	164,462	A→T	7.3%	L332Q (CTG→CAG)	pntB ←	pyridine nucleotide transhydrogenase subunit beta
RA	164,466	C→G	8.7%	G331R (GGC→CGC)	pntB ←	pyridine nucleotide transhydrogenase subunit beta
RA	165,929	G→T	8.1%	A326A (GCC→GCA)	pntAA ←	pyridine nucleotide transhydrogenase subunit alpha
RA	165,932	A→C	8.0%	D325E (GAT→GAG)	pntAA ←	pyridine nucleotide transhydrogenase subunit alpha
RA	181,805	T→C	6.3%	intergenic (+19/‑87)	PP_r01 → / → PP_5SB	5S ribosomal RNA/5S ribosomal RNA
RA	181,811	C→T	6.6%	intergenic (+25/‑81)	PP_r01 → / → PP_5SB	5S ribosomal RNA/5S ribosomal RNA
RA	181,812	A→G	6.6%	intergenic (+26/‑80)	PP_r01 → / → PP_5SB	5S ribosomal RNA/5S ribosomal RNA
RA	181,818	G→A	6.8%	intergenic (+32/‑74)	PP_r01 → / → PP_5SB	5S ribosomal RNA/5S ribosomal RNA
RA	181,943	C→T	27.8%	noncoding (52/120 nt)	PP_5SB →	5S ribosomal RNA
RA	182,034	Δ1 bp	14.6%	intergenic (+23/+42)	PP_5SB → / ← PP_0160	5S ribosomal RNA/ferrioxamine receptor
RA	182,036:1	+C	14.3%	intergenic (+25/+40)	PP_5SB → / ← PP_0160	5S ribosomal RNA/ferrioxamine receptor
RA	195,559	C→A	21.0%	T355T (ACC→ACA)	PP_0168 →	putative surface adhesion protein
RA	195,628	C→T	11.2%	D378D (GAC→GAT)	PP_0168 →	putative surface adhesion protein
RA	195,629	A→G	11.7%	T379A (ACC→GCC)	PP_0168 →	putative surface adhesion protein
RA	195,634	C→T	39.6%	T380T (ACC→ACT)	PP_0168 →	putative surface adhesion protein
RA	195,724	A→G	10.8%	V410V (GTA→GTG)	PP_0168 →	putative surface adhesion protein
RA	195,732	A→C	5.9%	N413T (AAC→ACC)	PP_0168 →	putative surface adhesion protein
RA	196,306	T→C	25.9%	N604N (AAT→AAC)	PP_0168 →	putative surface adhesion protein
RA	196,327	A→C	26.4%	T611T (ACA→ACC)	PP_0168 →	putative surface adhesion protein
RA	196,351	C→G	29.2%	T619T (ACC→ACG)	PP_0168 →	putative surface adhesion protein
RA	196,390	T→C	25.8%	D632D (GAT→GAC)	PP_0168 →	putative surface adhesion protein
RA	196,795	G→C	9.1%	T767T (ACG→ACC)	PP_0168 →	putative surface adhesion protein
RA	196,879	G→A	20.9%	V795V (GTG→GTA)	PP_0168 →	putative surface adhesion protein
RA	197,032	C→T	7.1%	T846T (ACC→ACT)	PP_0168 →	putative surface adhesion protein
RA	197,089	T→C	16.2%	N865N (AAT→AAC)	PP_0168 →	putative surface adhesion protein
RA	197,551	C→G	12.1%	T1019T (ACC→ACG)	PP_0168 →	putative surface adhesion protein
RA	197,572	G→A	23.7%	K1026K (AAG→AAA)	PP_0168 →	putative surface adhesion protein
RA	197,590	T→C	26.4%	D1032D (GAT→GAC)	PP_0168 →	putative surface adhesion protein
RA	197,632	T→C	11.7%	T1046T (ACT→ACC)	PP_0168 →	putative surface adhesion protein
RA	197,695	G→C	18.6%	T1067T (ACG→ACC)	PP_0168 →	putative surface adhesion protein
RA	198,367	G→C	5.6%	V1291V (GTG→GTC)	PP_0168 →	putative surface adhesion protein
RA	198,777	T→A	7.5%	L1428Q (CTG→CAG)	PP_0168 →	putative surface adhesion protein
RA	199,434	T→A	6.0%	L1647Q (CTG→CAG)	PP_0168 →	putative surface adhesion protein
RA	199,681	G→C	6.7%	V1729V (GTG→GTC)	PP_0168 →	putative surface adhesion protein
RA	199,690	Δ1 bp	5.8%	coding (5196/26049 nt)	PP_0168 →	putative surface adhesion protein
RA	200,748	T→A	5.4%	L2085Q (CTG→CAG)	PP_0168 →	putative surface adhesion protein
RA	202,062	T→A	6.6%	L2523Q (CTG→CAG)	PP_0168 →	putative surface adhesion protein
RA	202,071	C→G	5.9%	T2526S (ACC→AGC)	PP_0168 →	putative surface adhesion protein
RA	206,739	T→A	13.2%	L4082Q (CTG→CAG)	PP_0168 →	putative surface adhesion protein
RA	210,699	T→A	9.1%	L5402Q (CTG→CAG)	PP_0168 →	putative surface adhesion protein
RA	210,708	C→G	6.6%	T5405S (ACC→AGC)	PP_0168 →	putative surface adhesion protein
RA	211,374	T→A	8.9%	L5627Q (CTG→CAG)	PP_0168 →	putative surface adhesion protein
RA	211,900	T→A	7.3%	V5802V (GTT→GTA)	PP_0168 →	putative surface adhesion protein
RA	212,034	T→A	10.1%	L5847Q (CTG→CAG)	PP_0168 →	putative surface adhesion protein
RA	212,560	T→A	6.7%	V6022V (GTT→GTA)	PP_0168 →	putative surface adhesion protein
RA	213,085	C→T	6.7%	A6197A (GCC→GCT)	PP_0168 →	putative surface adhesion protein
RA	213,106	T→C	8.6%	N6204N (AAT→AAC)	PP_0168 →	putative surface adhesion protein
RA	213,118	T→C	5.9%	G6208G (GGT→GGC)	PP_0168 →	putative surface adhesion protein
RA	214,014	T→A	9.7%	L6507Q (CTG→CAG)	PP_0168 →	putative surface adhesion protein
RA	220,561	A→T	5.8%	intergenic (+18/‑110)	PP_0168 → / → PP_5431	putative surface adhesion protein/hypothetical protein
RA	220,562	C→G	5.8%	intergenic (+19/‑109)	PP_0168 → / → PP_5431	putative surface adhesion protein/hypothetical protein
RA	220,563	A→T	5.8%	intergenic (+20/‑108)	PP_0168 → / → PP_5431	putative surface adhesion protein/hypothetical protein
RA	225,542	A→T	5.0%	L40Q (CTG→CAG)	PP_0173 ←	transcriptional factor‑like protein
RA	225,545	A→T	5.0%	L39Q (CTG→CAG)	PP_0173 ←	transcriptional factor‑like protein
RA	233,832	A→T	11.7%	intergenic (+20/+43)	PP_0180 → / ← PP_0181	cytochrome c family protein/hypothetical protein
RA	233,833	C→G	11.7%	intergenic (+21/+42)	PP_0180 → / ← PP_0181	cytochrome c family protein/hypothetical protein
RA	233,834	A→T	12.0%	intergenic (+22/+41)	PP_0180 → / ← PP_0181	cytochrome c family protein/hypothetical protein
RA	236,388	C→G	5.5%	L149L (CTG→CTC)	argH ←	argininosuccinate lyase
RA	237,457	T→C	5.2%	L113S (TTG→TCG)	algR →	alginate biosynthesis regulatory protein
RA	243,622	T→A	6.1%	K183N (AAA→AAT) ‡	fkl ←	FKBP‑type peptidyl‑prolyl cis‑trans isomerase
RA	243,623	T→A	6.1%	K183I (AAA→ATA) ‡	fkl ←	FKBP‑type peptidyl‑prolyl cis‑trans isomerase
RA	258,951	C→G	7.9%	A162G (GCC→GGC)	PP_0207 →	nitrate ABC transporter substrate‑binding protein
RA	258,954	T→A	7.7%	V163D (GTC→GAC)	PP_0207 →	nitrate ABC transporter substrate‑binding protein
RA	258,957	C→G	7.8%	A164G (GCC→GGC)	PP_0207 →	nitrate ABC transporter substrate‑binding protein
RA	268,744	T→A	7.2%	intergenic (‑75/+25)	PP_0216 ← / ← desA	sensory box/GGDEF family protein/delta‑9 fatty acid desaturase
RA	268,746	G→C	7.7%	intergenic (‑77/+23)	PP_0216 ← / ← desA	sensory box/GGDEF family protein/delta‑9 fatty acid desaturase
RA	273,668	G→C	5.9%	R34G (CGC→GGC)	metNB ←	methionine ABC transporter ATP‑binding protein
RA	282,579	A→T	5.6%	N10I (AAT→ATT)	betT‑II →	choline/carnitine/betaine transporter
RA	284,587	T→A	16.5%	intergenic (+33/+30)	betT‑II → / ← atsK	choline/carnitine/betaine transporter/alpha‑ketoglutarate‑dependent sulfonate dioxygenase
RA	284,588	T→A	16.8%	intergenic (+34/+29)	betT‑II → / ← atsK	choline/carnitine/betaine transporter/alpha‑ketoglutarate‑dependent sulfonate dioxygenase
RA	287,068	G→C	9.2%	P19R (CCG→CGG) ‡	tauB‑II ←	taurine ABC transporter ATP‑binding protein
RA	287,069	G→C	9.4%	P19A (CCG→GCG) ‡	tauB‑II ←	taurine ABC transporter ATP‑binding protein
RA	292,607	C→G	6.3%	intergenic (+22/‑38)	ssuA → / → ssuD	aliphatic sulfonatesABC transporter substrate‑binding protein/alkanesulfonate monooxygenase
RA	294,751	G→C	6.3%	G52R (GGC→CGC)	ssuB →	aliphatic sulfonates ABC transporter ATP‑binding protein SsuB
RA	295,247	G→A	7.7%	G217E (GGG→GAG)	ssuB →	aliphatic sulfonates ABC transporter ATP‑binding protein SsuB
RA	295,250	T→C	8.0%	L218P (CTC→CCC)	ssuB →	aliphatic sulfonates ABC transporter ATP‑binding protein SsuB
RA	296,370	C→A	5.5%	A20S (GCG→TCG)	PP_0242 ←	TetR family transcriptional regulator
RA	296,371	C→G	5.7%	E19D (GAG→GAC) ‡	PP_0242 ←	TetR family transcriptional regulator
RA	296,372	T→G	5.4%	E19A (GAG→GCG) ‡	PP_0242 ←	TetR family transcriptional regulator
RA	308,740	C→T	9.3%	intergenic (+1754/‑116)	hslO → / → PP_0254	molecular chaperone HslO/hypothetical protein
RA	308,741	A→G	8.9%	intergenic (+1755/‑115)	hslO → / → PP_0254	molecular chaperone HslO/hypothetical protein
RA	310,505	T→C	6.6%	S625G (AGC→GGC)	PP_0256 ←	putative oxidoreductase
RA	310,506	G→A	6.0%	A624A (GCC→GCT)	PP_0256 ←	putative oxidoreductase
RA	313,851	T→C	5.4%	intergenic (+22/+29)	ygaU → / ← yrfG	murein cross‑linking regulator/purine nucleotidase
RA	313,852:1	+A	5.4%	intergenic (+23/+28)	ygaU → / ← yrfG	murein cross‑linking regulator/purine nucleotidase
RA	321,043	C→G	6.3%	C145W (TGC→TGG)	aguA →	agmatine deiminase
RA	322,135	G→A	15.9%	intergenic (+420/+38)	aguA → / ← PP_0267	agmatine deiminase/ferric siderophore receptor
RA	322,142	T→C	19.5%	intergenic (+427/+31)	aguA → / ← PP_0267	agmatine deiminase/ferric siderophore receptor
RA	325,161	C→G	8.5%	P149A (CCA→GCA)	oprQ →	outer‑membrane porin D
RA	326,067	C→A	10.1%	*556Y (TAG→TAT)	PP_0269 ←	glutamate synthase large subunit
RA	326,070	T→G	10.7%	A555A (GCA→GCC)	PP_0269 ←	glutamate synthase large subunit
RA	334,605	A→T	11.3%	L28* (TTG→TAG) ‡	PP_0276 ←	Cro/CI family transcriptional regulator
RA	334,606	A→T	11.5%	L28M (TTG→ATG) ‡	PP_0276 ←	Cro/CI family transcriptional regulator
RA	335,435	C→T	5.4%	intergenic (‑38/+166)	PP_0277 ← / ← PP_5437	hypothetical protein/hypothetical protein
RA	335,436	A→T	5.4%	intergenic (‑39/+165)	PP_0277 ← / ← PP_5437	hypothetical protein/hypothetical protein
RA	335,437	A→G	5.3%	intergenic (‑40/+164)	PP_0277 ← / ← PP_5437	hypothetical protein/hypothetical protein
RA	337,812	A→G	10.3%	intergenic (‑59/+70)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	337,819:1	+A	7.4%	intergenic (‑66/+63)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	337,822	A→C	7.4%	intergenic (‑69/+60)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	337,825	C→G	7.1%	intergenic (‑72/+57)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	337,828	G→T	7.3%	intergenic (‑75/+54)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	337,830	Δ1 bp	7.1%	intergenic (‑77/+52)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	337,839	C→T	9.2%	intergenic (‑86/+43)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	339,228	C→G	6.3%	M12I (ATG→ATC)	PP_0281 ←	amino acid ABC transporter permease
RA	343,610	T→A	5.6%	intergenic (‑163/‑77)	PP_5439 ← / → PP_5440	hypothetical protein/hypothetical protein
RA	343,611	G→C	5.7%	intergenic (‑164/‑76)	PP_5439 ← / → PP_5440	hypothetical protein/hypothetical protein
RA	343,612	T→A	5.7%	intergenic (‑165/‑75)	PP_5439 ← / → PP_5440	hypothetical protein/hypothetical protein
RA	344,035	A→G	5.2%	intergenic (+121/+68)	PP_5440 → / ← PP_t72	hypothetical protein/tRNA‑Phe
RA	344,044	Δ1 bp	6.4%	intergenic (+130/+59)	PP_5440 → / ← PP_t72	hypothetical protein/tRNA‑Phe
RA	344,048:1	+T	6.3%	intergenic (+134/+55)	PP_5440 → / ← PP_t72	hypothetical protein/tRNA‑Phe
RA	354,876	A→C	6.8%	F100C (TTC→TGC)	cbcW ←	choline/betaine/carnitine ABC transporter permease
RA	354,881	G→C	7.1%	V98V (GTC→GTG)	cbcW ←	choline/betaine/carnitine ABC transporter permease
RA	354,886	G→T	5.4%	Q97K (CAG→AAG)	cbcW ←	choline/betaine/carnitine ABC transporter permease
RA	358,088	A→G	9.4%	intergenic (+53/‑77)	tdcG‑I → / → PP_5441	L‑serine dehydratase/hypothetical protein
RA	358,090	C→T	9.6%	intergenic (+55/‑75)	tdcG‑I → / → PP_5441	L‑serine dehydratase/hypothetical protein
RA	358,093	T→C	11.1%	intergenic (+58/‑72)	tdcG‑I → / → PP_5441	L‑serine dehydratase/hypothetical protein
RA	358,094	G→A	10.6%	intergenic (+59/‑71)	tdcG‑I → / → PP_5441	L‑serine dehydratase/hypothetical protein
RA	358,097	A→G	10.2%	intergenic (+62/‑68)	tdcG‑I → / → PP_5441	L‑serine dehydratase/hypothetical protein
RA	358,099	C→T	10.9%	intergenic (+64/‑66)	tdcG‑I → / → PP_5441	L‑serine dehydratase/hypothetical protein
RA	362,748	Δ1 bp	6.1%	coding (738/966 nt)	lcdH ←	L‑carnitine dehydrogenase
RA	362,758:1	+G	6.1%	coding (728/966 nt)	lcdH ←	L‑carnitine dehydrogenase
RA	367,365	C→A	9.1%	intergenic (‑48/+26)	PP_5442 ← / ← PP_0306	hypothetical protein/hypothetical protein
RA	367,370	T→G	8.7%	intergenic (‑53/+21)	PP_5442 ← / ← PP_0306	hypothetical protein/hypothetical protein
RA	370,985	G→C	5.8%	A155P (GCT→CCT)	dgcA →	dimethylglycine dehydrogenase subunit
RA	377,527	A→G	5.2%	R67G (AGG→GGG)	PP_0314 →	hypothetical protein
RA	384,786	C→G	5.8%	R421G (CGC→GGC)	PP_0320 →	methyl‑accepting chemotaxis transducer
RA	384,790	A→T	6.4%	N422I (AAT→ATT)	PP_0320 →	methyl‑accepting chemotaxis transducer
RA	384,794	C→G	5.7%	A423A (GCC→GCG)	PP_0320 →	methyl‑accepting chemotaxis transducer
RA	388,725	T→A	7.2%	L198Q (CTG→CAG)	soxB →	sarcosine oxidase subunit beta
RA	390,096	A→C	5.0%	M123L (ATG→CTG)	soxA →	sarcosine oxidase subunit alpha
RA	390,996	G→T	6.5%	G423C (GGT→TGT)	soxA →	sarcosine oxidase subunit alpha
RA	390,999	T→A	5.9%	Y424N (TAC→AAC)	soxA →	sarcosine oxidase subunit alpha
RA	391,002	A→C	6.4%	S425R (AGC→CGC)	soxA →	sarcosine oxidase subunit alpha
RA	401,887	T→A	8.8%	intergenic (+411/+18)	PP_0334 → / ← PP_0335	transposase/glutathione S‑transferase family protein
RA	401,888	T→A	9.5%	intergenic (+412/+17)	PP_0334 → / ← PP_0335	transposase/glutathione S‑transferase family protein
RA	407,765	A→T	7.5%	A81A (GCT→GCA)	aceF ←	AceF‑S‑acetyldihydrolipoate
RA	407,768	A→T	7.8%	A80A (GCT→GCA)	aceF ←	AceF‑S‑acetyldihydrolipoate
RA	413,107	C→G	6.4%	A686A (GCC→GCG)	glnE →	glutamate‑ammonia‑ligase adenylyltransferase
RA	413,108	C→G	5.9%	R687G (CGC→GGC)	glnE →	glutamate‑ammonia‑ligase adenylyltransferase
RA	416,124	G→C	8.1%	D297H (GAC→CAC)	waaC →	ADP‑heptose‑‑LPS heptosyltransferase
RA	417,375	C→T	7.2%	P361L (CCG→CTG)	waaG →	lipopolysaccharide glucosyltransferase I
RA	417,378	A→G	7.5%	Q362R (CAG→CGG)	waaG →	lipopolysaccharide glucosyltransferase I
RA	418,298	C→G	5.3%	L26L (CTC→CTG)	PP_0345 →	heptose kinase WapP
RA	418,299	C→G	5.3%	Q27E (CAG→GAG)	PP_0345 →	heptose kinase WapP
RA	428,857	Δ1 bp	6.4%	coding (153/957 nt)	PP_0351 ←	transmembrane sensor
RA	428,861:1	+C	6.5%	coding (149/957 nt)	PP_0351 ←	transmembrane sensor
RA	438,271	A→G	5.2%	L31P (CTG→CCG)	rdoA ←	serine/threonine protein kinase
RA	444,433	C→A	5.3%	P198Q (CCG→CAG)	bioD →	dethiobiotin synthetase
RA	444,596	T→A	5.1%	intergenic (+75/‑99)	bioD → / → PP_0367	dethiobiotin synthetase/hypothetical protein
RA	451,273	A→T	6.5%	R201R (CGT→CGA)	PP_0371 ←	LysR family transcriptional regulator
RA	458,241	C→G	6.9%	G181A (GGC→GCC)	pqqC ←	pyrroloquinoline‑quinone synthase
RA	467,101	A→G	11.1%	intergenic (‑31/+22)	PP_5445 ← / ← PP_t71	hypothetical protein/tRNA‑Met
RA	467,104	C→T	11.7%	intergenic (‑34/+19)	PP_5445 ← / ← PP_t71	hypothetical protein/tRNA‑Met
RA	471,069	T→C	14.3%	intergenic (‑110/+18)	PP_0386 ← / ← rpoD	sensory box protein/RNA polymerase sigma 70 factor
RA	471,070	G→A	14.3%	intergenic (‑111/+17)	PP_0386 ← / ← rpoD	sensory box protein/RNA polymerase sigma 70 factor
RA	476,700	A→C	7.9%	Q330P (CAG→CCG) ‡	tsaD →	tRNA N6‑adenosine(37)‑threonylcarbamoyltransferase complex transferase subunit TsaD
RA	476,701	G→T	8.2%	Q330H (CAG→CAT) ‡	tsaD →	tRNA N6‑adenosine(37)‑threonylcarbamoyltransferase complex transferase subunit TsaD
RA	503,595	T→C	7.5%	F208S (TTT→TCT) ‡	PP_0414 →	polyamine ABC transporter permease
RA	503,596	T→A	7.5%	F208L (TTT→TTA) ‡	PP_0414 →	polyamine ABC transporter permease
RA	503,597	G→A	7.3%	D209N (GAC→AAC)	PP_0414 →	polyamine ABC transporter permease
RA	503,828	Δ1 bp	10.8%	intergenic (+28/‑123)	PP_0414 → / → rpe	polyamine ABC transporter permease/ribulose‑5‑phosphate 3‑epimerase
RA	503,834	A→T	10.1%	intergenic (+34/‑117)	PP_0414 → / → rpe	polyamine ABC transporter permease/ribulose‑5‑phosphate 3‑epimerase
RA	503,835	A→T	9.5%	intergenic (+35/‑116)	PP_0414 → / → rpe	polyamine ABC transporter permease/ribulose‑5‑phosphate 3‑epimerase
RA	503,840:1	+C	9.5%	intergenic (+40/‑111)	PP_0414 → / → rpe	polyamine ABC transporter permease/ribulose‑5‑phosphate 3‑epimerase
RA	516,696	T→G	7.0%	E100A (GAA→GCA) ‡	PP_0429 ←	short‑chain dehydrogenase/reductase family oxidoreductase
RA	516,697	C→A	7.3%	E100* (GAA→TAA) ‡	PP_0429 ←	short‑chain dehydrogenase/reductase family oxidoreductase
RA	519,340	C→G	5.1%	I242M (ATC→ATG)	argC →	N‑acetyl‑gamma‑glutamyl‑phosphate reductase
RA	519,341	C→G	5.6%	H243D (CAT→GAT)	argC →	N‑acetyl‑gamma‑glutamyl‑phosphate reductase
RA	524,339	A→G	12.1%	intergenic (+203/‑613)	tyrS → / → PP_16SC	tyrosine‑‑tRNA ligase/16S ribosomal RNA
RA	524,352	G→C	18.8%	intergenic (+216/‑600)	tyrS → / → PP_16SC	tyrosine‑‑tRNA ligase/16S ribosomal RNA
RA	524,355	G→C	19.5%	intergenic (+219/‑597)	tyrS → / → PP_16SC	tyrosine‑‑tRNA ligase/16S ribosomal RNA
RA	524,368	C→T	6.6%	intergenic (+232/‑584)	tyrS → / → PP_16SC	tyrosine‑‑tRNA ligase/16S ribosomal RNA
RA	535,821	G→T	8.8%	E85* (GAA→TAA) ‡	rplA →	50S ribosomal protein L1
RA	535,822	A→C	9.1%	E85A (GAA→GCA) ‡	rplA →	50S ribosomal protein L1
RA	537,461	T→A	7.7%	noncoding (54/66 nt)	PP_mr07 →	P26 ncRNA
RA	537,464	T→A	7.2%	noncoding (57/66 nt)	PP_mr07 →	P26 ncRNA
RA	537,471	G→A	5.4%	noncoding (64/66 nt)	PP_mr07 →	P26 ncRNA
RA	548,806	A→C	8.2%	E551D (GAA→GAC)	fusA →	elongation factor G 1
RA	548,807	G→T	8.0%	V552F (GTC→TTC)	fusA →	elongation factor G 1
RA	550,552	C→G	17.0%	intergenic (+30/‑112)	tufB → / → rpsJ	elongation factor Tu‑B/30S ribosomal protein S10
RA	555,026	T→A	5.1%	L79L (CTT→CTA)	rplP →	50S ribosomal protein L16
RA	555,768	T→G	5.2%	S28A (TCG→GCG)	rplN →	50S ribosomal protein L14
RA	555,771	C→A	5.3%	H29N (CAC→AAC)	rplN →	50S ribosomal protein L14
RA	557,335	Δ1 bp	6.8%	intergenic (+75/‑134)	rpsN → / → rpsH	30S ribosomal protein S14/30S ribosomal protein S8
RA	557,339:1	+A	6.9%	intergenic (+79/‑130)	rpsN → / → rpsH	30S ribosomal protein S14/30S ribosomal protein S8
RA	564,380:1	+A	13.8%	intergenic (+29/‑144)	rplQ → / → katA	50S ribosomal protein L17/catalase
RA	564,385	Δ1 bp	13.8%	intergenic (+34/‑139)	rplQ → / → katA	50S ribosomal protein L17/catalase
RA	564,396	T→C	5.1%	intergenic (+45/‑128)	rplQ → / → katA	50S ribosomal protein L17/catalase
RA	566,623	C→T	6.3%	intergenic (+32/+41)	bfr‑I → / ← uvrA	bacterioferritin/uvrABC excinuclease protein A
RA	566,633	A→G	5.4%	intergenic (+42/+31)	bfr‑I → / ← uvrA	bacterioferritin/uvrABC excinuclease protein A
RA	571,217	G→C	9.4%	K62N (AAG→AAC)	ssb →	single‑stranded DNA‑binding protein
RA	571,218	G→C	9.0%	V63L (GTT→CTT)	ssb →	single‑stranded DNA‑binding protein
RA	571,620	G→A	18.3%	intergenic (+43/+48)	ssb → / ← PP_0486	single‑stranded DNA‑binding protein/GntR family transcriptional regulator
RA	571,621	T→C	18.5%	intergenic (+44/+47)	ssb → / ← PP_0486	single‑stranded DNA‑binding protein/GntR family transcriptional regulator
RA	572,521	A→G	7.0%	I191T (ATC→ACC)	PP_0486 ←	GntR family transcriptional regulator
RA	572,528	C→T	7.2%	V189M (GTG→ATG)	PP_0486 ←	GntR family transcriptional regulator
RA	578,362	A→G	5.4%	S110G (AGC→GGC)	fdoH →	formate dehydrogenase‑O subunit beta
RA	578,365	C→T	5.8%	P111S (CCG→TCG)	fdoH →	formate dehydrogenase‑O subunit beta
RA	584,238	T→A	5.2%	intergenic (+76/+31)	PP_t75 → / ← ansA	tRNA‑Sec/type 1 L‑asparaginase
RA	591,082	G→A	5.8%	R109H (CGC→CAC)	PP_0501 →	NAD‑dependent epimerase/dehydratase family protein
RA	591,085	T→C	5.7%	V110A (GTG→GCG)	PP_0501 →	NAD‑dependent epimerase/dehydratase family protein
RA	591,706	C→G	6.4%	intergenic (+17/+14)	PP_0501 → / ← PP_0502	NAD‑dependent epimerase/dehydratase family protein/hypothetical protein
RA	592,816	G→C	7.1%	G184A (GGC→GCC)	PP_0503 →	MFS transporter
RA	593,390	C→G	7.2%	A375A (GCC→GCG)	PP_0503 →	MFS transporter
RA	593,393	C→G	7.2%	A376A (GCC→GCG)	PP_0503 →	MFS transporter
RA	593,436	G→T	7.6%	E391* (GAG→TAG) ‡	PP_0503 →	MFS transporter
RA	593,437	A→C	7.6%	E391A (GAG→GCG) ‡	PP_0503 →	MFS transporter
RA	604,826	A→G	6.7%	T46A (ACC→GCC) ‡	thiL →	thiamin monophosphate kinase
RA	604,827	C→T	6.4%	T46I (ACC→ATC) ‡	thiL →	thiamin monophosphate kinase
RA	605,124	G→A	5.8%	R145H (CGC→CAC)	thiL →	thiamin monophosphate kinase
RA	605,129	A→T	6.0%	S147C (AGC→TGC)	thiL →	thiamin monophosphate kinase
RA	607,608	C→A	7.5%	P170Q (CCG→CAG)	ribA →	GTP cyclohydrolase II
RA	607,611	T→G	6.2%	L171R (CTG→CGG)	ribA →	GTP cyclohydrolase II
RA	612,733	Δ1 bp	7.6%	coding (1452/1896 nt)	dxs ←	1‑deoxyxylulose‑5‑phosphate synthase
RA	612,737:1	+T	7.8%	coding (1448/1896 nt)	dxs ←	1‑deoxyxylulose‑5‑phosphate synthase
RA	614,495	A→T	6.6%	L252Q (CTG→CAG)	ispA ←	farnesyl diphosphate synthase
RA	614,601:1	+A	5.8%	coding (649/888 nt)	ispA ←	farnesyl diphosphate synthase
RA	624,429	Δ1 bp	7.8%	coding (481/702 nt)	PP_0537 ←	transcriptional regulator
RA	624,433:1	+A	7.8%	coding (477/702 nt)	PP_0537 ←	transcriptional regulator
RA	626,559	T→G	6.1%	K213Q (AAG→CAG)	dedA ←	inner membrane protein
RA	626,572	C→A	6.4%	L208L (CTG→CTT)	dedA ←	inner membrane protein
RA	646,275	T→A	11.0%	intergenic (‑178/‑106)	PP_0556 ← / → acoR	acetoin catabolism protein/acetoin catabolism regulatory protein
RA	646,605	C→T	6.0%	A75A (GCC→GCT)	acoR →	acetoin catabolism regulatory protein
RA	646,606	A→G	6.0%	S76G (AGC→GGC)	acoR →	acetoin catabolism regulatory protein
RA	648,250	A→T	7.9%	intergenic (+16/+75)	acoR → / ← accC	acetoin catabolism regulatory protein/acetyl‑CoA carboxylase biotin carboxylase subunit
RA	648,290	A→C	11.4%	intergenic (+56/+35)	acoR → / ← accC	acetoin catabolism regulatory protein/acetyl‑CoA carboxylase biotin carboxylase subunit
RA	648,292	A→T	11.8%	intergenic (+58/+33)	acoR → / ← accC	acetoin catabolism regulatory protein/acetyl‑CoA carboxylase biotin carboxylase subunit
RA	648,294	G→T	11.1%	intergenic (+60/+31)	acoR → / ← accC	acetoin catabolism regulatory protein/acetyl‑CoA carboxylase biotin carboxylase subunit
RA	660,595	T→C	5.1%	G546G (GGT→GGC)	speA →	biosynthetic arginine decarboxylase
RA	664,889	C→T	5.8%	A584A (GCC→GCT)	yfhM →	lipoprotein
RA	670,788	C→T	11.5%	Q743* (CAG→TAG) ‡	pbpC →	peptidoglycan glycosyltransferase
RA	670,789	A→G	10.2%	Q743R (CAG→CGG) ‡	pbpC →	peptidoglycan glycosyltransferase
RA	672,370	T→G	5.1%	G474G (GGT→GGG)	PP_0573 →	hypothetical protein
RA	675,590	A→T	8.2%	C38S (TGC→AGC)	PP_0577 ←	hypothetical protein
RA	675,592	C→G	9.1%	G37A (GGC→GCC)	PP_0577 ←	hypothetical protein
RA	675,594	A→T	8.4%	A36A (GCT→GCA)	PP_0577 ←	hypothetical protein
RA	680,674	C→T	5.9%	P64L (CCG→CTG)	PP_0583 →	AraC family transcriptional regulator
RA	680,677	A→G	5.8%	Q65R (CAG→CGG)	PP_0583 →	AraC family transcriptional regulator
RA	683,659	C→G	5.5%	K65N (AAG→AAC)	PP_0585 ←	MerR family metal‑sensitive transcriptional regulator
RA	683,664	C→T	5.5%	G64S (GGC→AGC)	PP_0585 ←	MerR family metal‑sensitive transcriptional regulator
RA	684,844	Δ1 bp	5.1%	coding (1406/2400 nt)	cadA‑II ←	cadmium translocating P‑type ATPase
RA	684,849:1	+A	5.2%	coding (1401/2400 nt)	cadA‑II ←	cadmium translocating P‑type ATPase
RA	685,534	G→A	7.1%	A239V (GCA→GTA)	cadA‑II ←	cadmium translocating P‑type ATPase
RA	685,537	C→A	6.1%	W238L (TGG→TTG)	cadA‑II ←	cadmium translocating P‑type ATPase
RA	685,540	T→G	6.6%	Q237P (CAA→CCA)	cadA‑II ←	cadmium translocating P‑type ATPase
RA	685,543	T→C	6.9%	Y236C (TAC→TGC)	cadA‑II ←	cadmium translocating P‑type ATPase
RA	693,593	C→G	10.2%	G151A (GGC→GCC)	PP_0595 ←	LysR family transcriptional regulator
RA	697,217	T→C	7.2%	intergenic (+141/‑610)	mmsA‑I → / → PP_16SD	methylmalonate‑semialdehyde dehydrogenase/16S ribosomal RNA
RA	697,228	C→G	15.1%	intergenic (+152/‑599)	mmsA‑I → / → PP_16SD	methylmalonate‑semialdehyde dehydrogenase/16S ribosomal RNA
RA	697,231	C→G	12.9%	intergenic (+155/‑596)	mmsA‑I → / → PP_16SD	methylmalonate‑semialdehyde dehydrogenase/16S ribosomal RNA
RA	697,242	G→A	8.7%	intergenic (+166/‑585)	mmsA‑I → / → PP_16SD	methylmalonate‑semialdehyde dehydrogenase/16S ribosomal RNA
RA	699,725	A→G	58.5%	intergenic (+115/‑129)	PP_t06 → / → PP_23SD	tRNA‑Ala/23S ribosomal RNA
RA	702,766:1	+G	10.1%	intergenic (+11/‑121)	PP_23SD → / → PP_5SD	23S ribosomal RNA/5S ribosomal RNA
RA	702,769	Δ1 bp	10.0%	intergenic (+14/‑118)	PP_23SD → / → PP_5SD	23S ribosomal RNA/5S ribosomal RNA
RA	709,861	C→G	8.7%	A201A (GCC→GCG)	ribF →	bifunctional riboflavin kinase/FMN adenylyltransferase
RA	709,862	C→G	8.9%	R202G (CGC→GGC)	ribF →	bifunctional riboflavin kinase/FMN adenylyltransferase
RA	715,012:1	+T	7.1%	intergenic (+75/+2)	ispH → / ← PP_0607	4‑hydroxy‑3‑methylbut‑2‑enyl diphosphate reductase/type IV pili biogenesis protein FimT
RA	715,019	Δ1 bp	10.8%	coding (478/483 nt)	PP_0607 ←	type IV pili biogenesis protein FimT
RA	718,450	A→G	9.1%	intergenic (+17/+60)	thiO → / ← PP_0613	FAD‑dependent glycine/D‑amino acid oxidase/amidase family protein
RA	727,318	C→T	8.7%	W6* (TGG→TAG) ‡	PP_0621 ←	hypothetical protein
RA	727,319	A→T	8.0%	W6R (TGG→AGG) ‡	PP_0621 ←	hypothetical protein
RA	727,320	A→G	8.2%	P5P (CCT→CCC)	PP_0621 ←	hypothetical protein
RA	733,650	A→T	5.1%	intergenic (+21/‑26)	PP_t09 → / → PP_t10	tRNA‑Lys/tRNA‑Pro
RA	735,613	A→G	5.5%	intergenic (‑36/+97)	PP_0627 ← / ← PP_0628	hypothetical protein/hypothetical protein
RA	735,620	A→G	6.0%	intergenic (‑43/+90)	PP_0627 ← / ← PP_0628	hypothetical protein/hypothetical protein
RA	735,621	C→T	5.9%	intergenic (‑44/+89)	PP_0627 ← / ← PP_0628	hypothetical protein/hypothetical protein
RA	735,837	C→G	5.6%	G168A (GGC→GCC) ‡	PP_0628 ←	hypothetical protein
RA	735,838	C→G	5.6%	G168R (GGC→CGC) ‡	PP_0628 ←	hypothetical protein
RA	743,463	A→G	9.3%	intergenic (+139/+135)	PP_0635 → / ← PP_0636	group II intron‑encoding maturase/cold shock DNA‑binding domain‑containing protein
RA	746,976	C→A	6.3%	intergenic (‑100/‑694)	PP_0638 ← / → PP_5448	transposase/hypothetical protein
RA	772,181	T→C	7.3%	intergenic (+39/‑160)	PP_0663 → / → PP_0664	AsnC family transcriptional regulator/homoserine dehydrogenase
RA	772,182	T→G	7.2%	intergenic (+40/‑159)	PP_0663 → / → PP_0664	AsnC family transcriptional regulator/homoserine dehydrogenase
RA	772,185	C→A	6.6%	intergenic (+43/‑156)	PP_0663 → / → PP_0664	AsnC family transcriptional regulator/homoserine dehydrogenase
RA	772,186	G→A	7.6%	intergenic (+44/‑155)	PP_0663 → / → PP_0664	AsnC family transcriptional regulator/homoserine dehydrogenase
RA	772,763	G→A	5.4%	L141L (TTG→TTA)	PP_0664 →	homoserine dehydrogenase
RA	772,766	T→C	5.4%	A142A (GCT→GCC)	PP_0664 →	homoserine dehydrogenase
RA	780,559	A→C	12.5%	intergenic (‑86/+36)	PP_0670 ← / ← glyA‑II	bile acid/Na+ symporter family transporter/serine hydroxymethyltransferase
RA	780,561	T→A	12.4%	intergenic (‑88/+34)	PP_0670 ← / ← glyA‑II	bile acid/Na+ symporter family transporter/serine hydroxymethyltransferase
RA	780,563	G→T	13.5%	intergenic (‑90/+32)	PP_0670 ← / ← glyA‑II	bile acid/Na+ symporter family transporter/serine hydroxymethyltransferase
RA	783,242	T→C	8.0%	D896G (GAC→GGC)	PP_0672 ←	sensory box protein
RA	783,245	C→G	8.2%	G895A (GGC→GCC)	PP_0672 ←	sensory box protein
RA	783,248	G→A	8.4%	A894V (GCC→GTC)	PP_0672 ←	sensory box protein
RA	788,584	C→A	6.9%	intergenic (+31/‑182)	ettA → / → gdhA	ADP/ATP ratio sensor/translation inhibitor/NADP‑dependent glutamate dehydrogenase
RA	788,586	A→T	6.9%	intergenic (+33/‑180)	ettA → / → gdhA	ADP/ATP ratio sensor/translation inhibitor/NADP‑dependent glutamate dehydrogenase
RA	788,587	A→T	6.9%	intergenic (+34/‑179)	ettA → / → gdhA	ADP/ATP ratio sensor/translation inhibitor/NADP‑dependent glutamate dehydrogenase
RA	788,589	T→G	7.5%	intergenic (+36/‑177)	ettA → / → gdhA	ADP/ATP ratio sensor/translation inhibitor/NADP‑dependent glutamate dehydrogenase
RA	788,599	T→C	5.2%	intergenic (+46/‑167)	ettA → / → gdhA	ADP/ATP ratio sensor/translation inhibitor/NADP‑dependent glutamate dehydrogenase
RA	794,952	T→A	5.6%	L364Q (CTG→CAG)	PP_0680 →	ATP‑dependent protease‑like protein
RA	794,955	T→A	5.5%	I365N (ATT→AAT)	PP_0680 →	ATP‑dependent protease‑like protein
RA	794,958	T→A	5.7%	L366Q (CTG→CAG)	PP_0680 →	ATP‑dependent protease‑like protein
RA	797,512	G→A	5.4%	intergenic (+33/‑44)	PP_0682 → / → PP_0683	inner membrane protein/hypothetical protein
RA	798,632	T→A	8.6%	L201Q (CTG→CAG)	fklB‑I →	FKBP‑type peptidyl‑prolyl cis‑trans isomerase
RA	798,665	C→A	10.5%	intergenic (+17/+10)	fklB‑I → / ← PP_0685	FKBP‑type peptidyl‑prolyl cis‑trans isomerase/hypothetical protein
RA	798,666	C→G	9.1%	intergenic (+18/+9)	fklB‑I → / ← PP_0685	FKBP‑type peptidyl‑prolyl cis‑trans isomerase/hypothetical protein
RA	798,667	T→G	8.8%	intergenic (+19/+8)	fklB‑I → / ← PP_0685	FKBP‑type peptidyl‑prolyl cis‑trans isomerase/hypothetical protein
RA	799,838	A→T	8.1%	L213Q (CTG→CAG)	ispB ←	octaprenyl diphosphate synthase
RA	799,844	T→A	14.7%	D211V (GAC→GTC)	ispB ←	octaprenyl diphosphate synthase
RA	799,850	A→T	15.2%	L209Q (CTG→CAG)	ispB ←	octaprenyl diphosphate synthase
RA	801,792	G→A	5.4%	V92I (GTC→ATC)	obg →	GTPase Obg
RA	806,330	T→C	6.2%	K335E (AAG→GAG)	PP_0693 ←	hypothetical protein
RA	806,331	G→A	6.2%	L334L (CTC→CTT)	PP_0693 ←	hypothetical protein
RA	811,322	T→A	6.5%	H167Q (CAT→CAA)	PP_5455 →	hypothetical protein
RA	811,323	T→A	6.4%	L168M (TTG→ATG)	PP_5455 →	hypothetical protein
RA	812,051	T→C	7.2%	Q68Q (CAA→CAG)	PP_0698 ←	LysR family transcriptional regulator
RA	812,056	G→A	5.9%	L67L (CTG→TTG)	PP_0698 ←	LysR family transcriptional regulator
RA	839,440	G→C	5.2%	A87A (GCC→GCG)	prs ←	ribose‑phosphate pyrophosphokinase
RA	839,443	G→C	5.2%	T86T (ACC→ACG)	prs ←	ribose‑phosphate pyrophosphokinase
RA	848,506	G→A	7.8%	L23F (CTT→TTT)	PP_0730 ←	hypothetical protein
RA	848,508	C→G	7.9%	R22P (CGG→CCG)	PP_0730 ←	hypothetical protein
RA	848,510	T→C	8.3%	K21K (AAA→AAG)	PP_0730 ←	hypothetical protein
RA	850,994	C→G	5.6%	intergenic (‑574/‑231)	pcs ← / → hemA	phosphatidylcholine synthase/glutamyl‑tRNA reductase
RA	850,995	C→G	5.5%	intergenic (‑575/‑230)	pcs ← / → hemA	phosphatidylcholine synthase/glutamyl‑tRNA reductase
RA	853,765	G→A	8.9%	R62H (CGT→CAT) ‡	prmC →	release factor‑(glutamine‑N5) methyltransferase
RA	853,766	T→C	9.1%	R62R (CGT→CGC) ‡	prmC →	release factor‑(glutamine‑N5) methyltransferase
RA	858,322	G→C	10.2%	R169G (CGG→GGG)	phr ←	deoxyribodipyrimidine photolyase
RA	858,325	C→G	9.9%	A168P (GCA→CCA)	phr ←	deoxyribodipyrimidine photolyase
RA	868,054	G→T	7.2%	intergenic (+149/+28)	PP_0750 → / ← mqo‑I	hypothetical protein/malate:quinone oxidoreductase
RA	868,055	A→C	7.7%	intergenic (+150/+27)	PP_0750 → / ← mqo‑I	hypothetical protein/malate:quinone oxidoreductase
RA	870,233	G→T	11.5%	R65S (CGC→AGC)	PP_5456 ←	hypothetical protein
RA	870,234	A→C	11.5%	A64A (GCT→GCG)	PP_5456 ←	hypothetical protein
RA	873,421	G→A	9.9%	G18S (GGC→AGC)	PP_5457 →	hypothetical protein
RA	873,428	T→C	8.7%	L20P (CTT→CCT)	PP_5457 →	hypothetical protein
RA	876,018	G→C	9.4%	noncoding (105/142 nt)	PP_mr65 ←	YybP‑YkoY
RA	876,021	G→C	9.3%	noncoding (102/142 nt)	PP_mr65 ←	YybP‑YkoY
RA	883,809	T→G	7.4%	intergenic (+44/‑284)	PP_0766 → / → PP_0767	hypothetical protein/LuxR family transcriptional regulator
RA	883,810	C→A	7.4%	intergenic (+45/‑283)	PP_0766 → / → PP_0767	hypothetical protein/LuxR family transcriptional regulator
RA	894,394	C→T	6.0%	G115G (GGC→GGT)	slyD →	FKBP‑type peptidyl‑prolyl cis‑trans isomerase
RA	894,399	A→T	6.2%	D117V (GAC→GTC)	slyD →	FKBP‑type peptidyl‑prolyl cis‑trans isomerase
RA	894,404	A→G	5.9%	T119A (ACC→GCC)	slyD →	FKBP‑type peptidyl‑prolyl cis‑trans isomerase
RA	894,409	T→C	5.6%	V120V (GTT→GTC)	slyD →	FKBP‑type peptidyl‑prolyl cis‑trans isomerase
RA	895,201	G→C	9.0%	intergenic (+38/+26)	PP_0777 → / ← PP_0778	glutathione peroxidase/group 1 family glycosyl transferase
RA	895,204	T→C	9.1%	intergenic (+41/+23)	PP_0777 → / ← PP_0778	glutathione peroxidase/group 1 family glycosyl transferase
RA	895,210	G→C	9.3%	intergenic (+47/+17)	PP_0777 → / ← PP_0778	glutathione peroxidase/group 1 family glycosyl transferase
RA	895,213	G→C	10.6%	intergenic (+50/+14)	PP_0777 → / ← PP_0778	glutathione peroxidase/group 1 family glycosyl transferase
RA	895,219	G→A	8.5%	intergenic (+56/+8)	PP_0777 → / ← PP_0778	glutathione peroxidase/group 1 family glycosyl transferase
RA	895,222	G→C	5.9%	intergenic (+59/+5)	PP_0777 → / ← PP_0778	glutathione peroxidase/group 1 family glycosyl transferase
RA	910,154	A→G	6.6%	Q220R (CAG→CGG)	fruB →	PTS fructose transporter subunit EI/HPr/IIA
RA	910,157	C→T	6.6%	P221L (CCG→CTG)	fruB →	PTS fructose transporter subunit EI/HPr/IIA
RA	911,448	C→G	7.3%	T651T (ACC→ACG)	fruB →	PTS fructose transporter subunit EI/HPr/IIA
RA	911,449	C→G	7.2%	R652G (CGT→GGT)	fruB →	PTS fructose transporter subunit EI/HPr/IIA
RA	919,179	C→A	5.2%	intergenic (‑77/+129)	opdC ← / ← PP_5458	histidine‑specific outer membrane porin D/hypothetical protein
RA	930,220	C→A	5.2%	K5135N (AAG→AAT)	PP_0806 ←	surface adhesion protein
RA	937,766	A→T	7.8%	L2620Q (CTG→CAG)	PP_0806 ←	surface adhesion protein
RA	937,771	A→T	7.8%	A2618A (GCT→GCA)	PP_0806 ←	surface adhesion protein
RA	940,480	A→G	5.2%	A1715A (GCT→GCC)	PP_0806 ←	surface adhesion protein
RA	940,485	C→T	5.7%	G1714S (GGC→AGC)	PP_0806 ←	surface adhesion protein
RA	944,829	A→T	6.9%	S266T (TCG→ACG)	PP_0806 ←	surface adhesion protein
RA	944,834	G→A	7.1%	P264L (CCC→CTC)	PP_0806 ←	surface adhesion protein
RA	944,837	T→C	7.8%	E263G (GAG→GGG)	PP_0806 ←	surface adhesion protein
RA	944,842	A→T	6.3%	R261R (CGT→CGA)	PP_0806 ←	surface adhesion protein
RA	953,232	A→G	5.8%	H13R (CAC→CGC)	cyoC →	cytochrome bo terminal oxidase subunit III
RA	953,241	G→A	7.4%	G16E (GGG→GAG)	cyoC →	cytochrome bo terminal oxidase subunit III
RA	955,079	Δ1 bp	6.2%	intergenic (+30/‑283)	cyoE → / → alaC	protoheme IX farnesyltransferase/aminotransferase
RA	955,083	T→A	6.3%	intergenic (+34/‑279)	cyoE → / → alaC	protoheme IX farnesyltransferase/aminotransferase
RA	955,085:1	+G	6.2%	intergenic (+36/‑277)	cyoE → / → alaC	protoheme IX farnesyltransferase/aminotransferase
RA	955,151	Δ1 bp	7.6%	intergenic (+102/‑211)	cyoE → / → alaC	protoheme IX farnesyltransferase/aminotransferase
RA	955,155	T→A	11.8%	intergenic (+106/‑207)	cyoE → / → alaC	protoheme IX farnesyltransferase/aminotransferase
RA	955,156	T→A	7.8%	intergenic (+107/‑206)	cyoE → / → alaC	protoheme IX farnesyltransferase/aminotransferase
RA	955,158:1	+T	7.5%	intergenic (+109/‑204)	cyoE → / → alaC	protoheme IX farnesyltransferase/aminotransferase
RA	955,586	C→G	6.4%	G75G (GGC→GGG)	alaC →	aminotransferase
RA	955,589	C→G	6.7%	I76M (ATC→ATG)	alaC →	aminotransferase
RA	968,878	G→T	8.5%	intergenic (‑308/+23)	PP_0831 ← / ← PP_t68	hypothetical protein/tRNA‑Leu
RA	968,881	A→C	7.4%	intergenic (‑311/+20)	PP_0831 ← / ← PP_t68	hypothetical protein/tRNA‑Leu
RA	970,240	T→G	6.8%	F29C (TTC→TGC) ‡	tgt →	queuine tRNA‑ribosyltransferase
RA	970,241	C→A	6.8%	F29L (TTC→TTA) ‡	tgt →	queuine tRNA‑ribosyltransferase
RA	980,640	T→G	7.7%	Y27D (TAT→GAT)	hscB →	DnaJ‑like molecular chaperone
RA	980,643	C→A	7.8%	R28S (CGC→AGC)	hscB →	DnaJ‑like molecular chaperone
RA	980,649	Δ1 bp	5.1%	coding (88/522 nt)	hscB →	DnaJ‑like molecular chaperone
RA	994,950	T→A	6.5%	intergenic (+26/+99)	PP_0859 → / ← PP_0860	ketoglutaramate omega‑amidase/sulfite reductase flavoprotein subunit
RA	994,951	T→A	6.6%	intergenic (+27/+98)	PP_0859 → / ← PP_0860	ketoglutaramate omega‑amidase/sulfite reductase flavoprotein subunit
RA	996,354	C→A	7.7%	Q415H (CAG→CAT) ‡	PP_0860 ←	sulfite reductase flavoprotein subunit
RA	996,355	T→G	7.5%	Q415P (CAG→CCG) ‡	PP_0860 ←	sulfite reductase flavoprotein subunit
RA	1,004,529	A→T	8.5%	Q184L (CAG→CTG)	PP_0866 →	transmembrane sensor
RA	1,013,237	C→A	18.0%	intergenic (+62/+69)	prfC → / ← potF‑I	peptide chain release factor 3/putrescine‑binding protein
RA	1,013,238	A→T	17.7%	intergenic (+63/+68)	prfC → / ← potF‑I	peptide chain release factor 3/putrescine‑binding protein
RA	1,013,244	G→C	17.1%	intergenic (+69/+62)	prfC → / ← potF‑I	peptide chain release factor 3/putrescine‑binding protein
RA	1,013,245	G→C	16.9%	intergenic (+70/+61)	prfC → / ← potF‑I	peptide chain release factor 3/putrescine‑binding protein
RA	1,013,251	A→T	17.5%	intergenic (+76/+55)	prfC → / ← potF‑I	peptide chain release factor 3/putrescine‑binding protein
RA	1,013,252	T→G	20.7%	intergenic (+77/+54)	prfC → / ← potF‑I	peptide chain release factor 3/putrescine‑binding protein
RA	1,013,258	A→T	20.0%	intergenic (+83/+48)	prfC → / ← potF‑I	peptide chain release factor 3/putrescine‑binding protein
RA	1,015,057	C→G	7.8%	R396P (CGC→CCC)	PP_0875 ←	hypothetical protein
RA	1,015,060	C→G	9.0%	G395A (GGG→GCG)	PP_0875 ←	hypothetical protein
RA	1,019,649	T→C	6.1%	Q128R (CAG→CGG) ‡	dppD ←	dipeptide ABC transporter ATP‑binding protein
RA	1,019,650	G→A	6.2%	Q128* (CAG→TAG) ‡	dppD ←	dipeptide ABC transporter ATP‑binding protein
RA	1,025,285	A→T	5.2%	intergenic (‑136/+93)	opdP ← / ← dppA‑II	glycine‑glutamate dipeptide porin/dipeptide ABC transporter substrate‑binding protein
RA	1,025,286	A→T	5.3%	intergenic (‑137/+92)	opdP ← / ← dppA‑II	glycine‑glutamate dipeptide porin/dipeptide ABC transporter substrate‑binding protein
RA	1,027,092:1	+T	5.6%	intergenic (‑122/+25)	dppA‑II ← / ← dppA‑III	dipeptide ABC transporter substrate‑binding protein/dipeptide ABC transporter substrate‑binding protein
RA	1,027,095	T→A	5.4%	intergenic (‑125/+22)	dppA‑II ← / ← dppA‑III	dipeptide ABC transporter substrate‑binding protein/dipeptide ABC transporter substrate‑binding protein
RA	1,027,098	Δ1 bp	5.4%	intergenic (‑128/+19)	dppA‑II ← / ← dppA‑III	dipeptide ABC transporter substrate‑binding protein/dipeptide ABC transporter substrate‑binding protein
RA	1,027,999	G→C	5.1%	A248A (GCC→GCG)	dppA‑III ←	dipeptide ABC transporter substrate‑binding protein
RA	1,028,002	G→C	6.5%	D247E (GAC→GAG)	dppA‑III ←	dipeptide ABC transporter substrate‑binding protein
RA	1,033,806	T→A	6.1%	D141E (GAT→GAA)	PP_0891 →	hypothetical protein
RA	1,033,811	G→C	7.1%	R143P (CGG→CCG)	PP_0891 →	hypothetical protein
RA	1,033,816	T→A	6.9%	F145I (TTC→ATC)	PP_0891 →	hypothetical protein
RA	1,034,966	A→T	5.2%	T334S (ACA→TCA)	PP_0892 →	phospholipase family protein
RA	1,036,902	C→G	7.4%	A6G (GCC→GGC)	PP_0896 →	carbon‑nitrogen hydrolase family protein
RA	1,045,261	T→C	7.7%	intergenic (+31/+75)	PP_0905 → / ← PP_0906	hypothetical protein/RND family multidrug transporter
RA	1,045,265	G→A	7.8%	intergenic (+35/+71)	PP_0905 → / ← PP_0906	hypothetical protein/RND family multidrug transporter
RA	1,045,268	T→C	7.6%	intergenic (+38/+68)	PP_0905 → / ← PP_0906	hypothetical protein/RND family multidrug transporter
RA	1,045,272	G→A	8.0%	intergenic (+42/+64)	PP_0905 → / ← PP_0906	hypothetical protein/RND family multidrug transporter
RA	1,045,278	T→C	5.9%	intergenic (+48/+58)	PP_0905 → / ← PP_0906	hypothetical protein/RND family multidrug transporter
RA	1,049,182	T→G	11.1%	K141Q (AAG→CAG)	PP_0907 ←	RND transporter membrane fusion protein‑like protein
RA	1,049,187	A→T	10.9%	L139Q (CTG→CAG)	PP_0907 ←	RND transporter membrane fusion protein‑like protein
RA	1,049,192	C→A	10.7%	L137L (CTG→CTT)	PP_0907 ←	RND transporter membrane fusion protein‑like protein
RA	1,058,260	Δ1 bp	6.5%	intergenic (‑186/+34)	PP_0914 ← / ← sodB	GGDEF domain‑containing protein/superoxide dismutase
RA	1,058,264:1	+T	6.4%	intergenic (‑190/+30)	PP_0914 ← / ← sodB	GGDEF domain‑containing protein/superoxide dismutase
RA	1,060,099	Δ1 bp	9.2%	coding (242/891 nt)	iciA →	chromosome initiation inhibitor
RA	1,060,105:1	+T	7.1%	coding (248/891 nt)	iciA →	chromosome initiation inhibitor
RA	1,070,265	G→C	27.1%	intergenic (+62/+82)	aroP‑I → / ← PP_0928	aromatic amino acid transport protein/K+‑dependent Na+/Ca+ exchanger‑like protein
RA	1,070,268	G→C	23.7%	intergenic (+65/+79)	aroP‑I → / ← PP_0928	aromatic amino acid transport protein/K+‑dependent Na+/Ca+ exchanger‑like protein
RA	1,074,712	A→T	5.3%	L50Q (CTG→CAG)	gatA ←	glutamyl‑tRNA(Gln) amidotransferase subunit A
RA	1,076,299	C→A	5.7%	L338M (CTG→ATG) ‡	mreB →	cell wall structural actin‑like protein MreB
RA	1,076,300	T→G	5.7%	L338R (CTG→CGG) ‡	mreB →	cell wall structural actin‑like protein MreB
RA	1,076,841	G→C	5.1%	R72P (CGC→CCC)	mreC →	cell shape‑determining protein MreC
RA	1,089,810	G→C	6.0%	Q222H (CAG→CAC)	fumC‑I →	class 2 fumarate hydratase
RA	1,089,816	A→T	5.4%	G224G (GGA→GGT)	fumC‑I →	class 2 fumarate hydratase
RA	1,089,817	A→T	5.6%	T225S (ACC→TCC)	fumC‑I →	class 2 fumarate hydratase
RA	1,089,823	G→C	5.1%	V227L (GTG→CTG)	fumC‑I →	class 2 fumarate hydratase
RA	1,097,043	G→C	5.3%	A150G (GCC→GGC)	PP_0954 ←	hypothetical protein
RA	1,114,874	T→C	6.2%	intergenic (‑63/+116)	rlmF ← / ← valS	ribosomal RNA large subunit methyltransferase F/valine‑‑tRNA ligase
RA	1,121,449	C→T	11.4%	V295V (GTC→GTT)	PP_0982 →	YjgP/YjgQ family permease
RA	1,121,450	A→G	11.5%	N296D (AAC→GAC)	PP_0982 →	YjgP/YjgQ family permease
RA	1,121,458	C→A	6.3%	R298R (CGC→CGA)	PP_0982 →	YjgP/YjgQ family permease
RA	1,126,597	C→A	5.6%	intergenic (‑46/+104)	tdcG‑II ← / ← gcvP‑I	L‑serine dehydratase/glycine dehydrogenase
RA	1,129,437	A→T	5.7%	A40A (GCT→GCA)	gcvP‑I ←	glycine dehydrogenase
RA	1,130,143:1	+T	6.7%	intergenic (‑192/+112)	gcvH‑I ← / ← PP_0990	glycine cleavage system protein H/DoxX family protein
RA	1,130,146	Δ1 bp	6.4%	intergenic (‑195/+109)	gcvH‑I ← / ← PP_0990	glycine cleavage system protein H/DoxX family protein
RA	1,130,198	A→T	9.3%	intergenic (‑247/+57)	gcvH‑I ← / ← PP_0990	glycine cleavage system protein H/DoxX family protein
RA	1,134,095	A→T	6.9%	intergenic (+34/+44)	PP_0995 → / ← gltS	membrane protein/glutamate:sodium symporter
RA	1,137,449	G→C	5.8%	T34S (ACT→AGT)	PP_0998 ←	hypothetical protein
RA	1,145,439	C→T	15.6%	intergenic (‑100/+41)	hemO ← / ← PP_1006	heme oxygenase/heme receptor
RA	1,145,446	G→A	19.5%	intergenic (‑107/+34)	hemO ← / ← PP_1006	heme oxygenase/heme receptor
RA	1,145,447	T→C	18.8%	intergenic (‑108/+33)	hemO ← / ← PP_1006	heme oxygenase/heme receptor
RA	1,145,454	A→G	15.7%	intergenic (‑115/+26)	hemO ← / ← PP_1006	heme oxygenase/heme receptor
RA	1,149,912	G→A	5.8%	intergenic (‑153/+104)	PP_1008 ← / ← gapA	RNA polymerase subunit sigma‑24/glyceraldehyde‑3‑phosphate dehydrogenase
RA	1,149,918	T→C	6.8%	intergenic (‑159/+98)	PP_1008 ← / ← gapA	RNA polymerase subunit sigma‑24/glyceraldehyde‑3‑phosphate dehydrogenase
RA	1,149,921	C→G	7.0%	intergenic (‑162/+95)	PP_1008 ← / ← gapA	RNA polymerase subunit sigma‑24/glyceraldehyde‑3‑phosphate dehydrogenase
RA	1,156,401	G→A	7.1%	intergenic (+98/‑118)	PP_1013 → / → yihS	sensor histidine kinase/aldose‑ketose isomerase
RA	1,168,587	A→C	5.3%	intergenic (+98/+155)	eda → / ← leuA	KHG/KDPG aldolase/2‑isopropylmalate synthase
RA	1,168,588	G→T	5.4%	intergenic (+99/+154)	eda → / ← leuA	KHG/KDPG aldolase/2‑isopropylmalate synthase
RA	1,178,755:1	+A	13.6%	intergenic (+54/+40)	guaA → / ← PP_1033	glutamine‑hydrolyzing GMP synthase/sulfatase domain‑containing protein
RA	1,178,758	G→C	14.1%	intergenic (+57/+37)	guaA → / ← PP_1033	glutamine‑hydrolyzing GMP synthase/sulfatase domain‑containing protein
RA	1,178,760	Δ1 bp	13.9%	intergenic (+59/+35)	guaA → / ← PP_1033	glutamine‑hydrolyzing GMP synthase/sulfatase domain‑containing protein
RA	1,184,543	Δ1 bp	5.6%	intergenic (‑153/‑259)	mltF ← / → purL	membrane‑bound lytic murein transglycosylase F/phosphoribosylformylglycinamidine synthase
RA	1,184,567	A→T	7.0%	intergenic (‑177/‑235)	mltF ← / → purL	membrane‑bound lytic murein transglycosylase F/phosphoribosylformylglycinamidine synthase
RA	1,184,574	A→G	8.2%	intergenic (‑184/‑228)	mltF ← / → purL	membrane‑bound lytic murein transglycosylase F/phosphoribosylformylglycinamidine synthase
RA	1,184,591	G→C	17.5%	intergenic (‑201/‑211)	mltF ← / → purL	membrane‑bound lytic murein transglycosylase F/phosphoribosylformylglycinamidine synthase
RA	1,184,594	G→C	16.7%	intergenic (‑204/‑208)	mltF ← / → purL	membrane‑bound lytic murein transglycosylase F/phosphoribosylformylglycinamidine synthase
RA	1,185,728	C→A	5.7%	G309G (GGC→GGA)	purL →	phosphoribosylformylglycinamidine synthase
RA	1,185,729	T→G	5.3%	S310A (TCC→GCC)	purL →	phosphoribosylformylglycinamidine synthase
RA	1,186,799	G→T	5.3%	Q666H (CAG→CAT)	purL →	phosphoribosylformylglycinamidine synthase
RA	1,186,800	A→C	5.3%	M667L (ATG→CTG)	purL →	phosphoribosylformylglycinamidine synthase
RA	1,189,041	A→G	6.6%	intergenic (+25/+17)	PP_1038 → / ← tatC‑I	hypothetical protein/Sec‑independent protein translocase protein
RA	1,189,042	C→T	6.7%	intergenic (+26/+16)	PP_1038 → / ← tatC‑I	hypothetical protein/Sec‑independent protein translocase protein
RA	1,193,934	T→A	9.6%	L23M (TTG→ATG) ‡	uxpA →	lipoprotein UxpA
RA	1,193,935	T→A	8.6%	L23* (TTG→TAG) ‡	uxpA →	lipoprotein UxpA
RA	1,198,338	C→T	7.7%	A214A (GCC→GCT)	gspE →	protein secretion protein
RA	1,198,339	A→G	7.6%	S215G (AGC→GGC)	gspE →	protein secretion protein
RA	1,198,622	A→G	6.5%	D309G (GAC→GGC) ‡	gspE →	protein secretion protein
RA	1,198,623	C→T	6.5%	D309D (GAC→GAT) ‡	gspE →	protein secretion protein
RA	1,199,573	C→G	9.3%	A141G (GCC→GGC)	gspF →	protein secretion protein
RA	1,200,471	G→A	5.3%	V41M (GTG→ATG) ‡	gspG →	protein secretion protein
RA	1,200,472	T→C	5.3%	V41A (GTG→GCG) ‡	gspG →	protein secretion protein
RA	1,209,553	C→G	6.3%	G52G (GGC→GGG)	ytnA →	amino acid permease YtnA
RA	1,219,155	A→G	6.5%	D229G (GAC→GGC) ‡	PP_1064 →	alpha/beta family hydrolase
RA	1,219,156	C→T	6.3%	D229D (GAC→GAT) ‡	PP_1064 →	alpha/beta family hydrolase
RA	1,229,553	G→C	9.7%	Q909H (CAG→CAC)	PP_1072 →	leucine‑rich repeat‑containing protein
RA	1,239,106	G→T	6.4%	intergenic (‑75/‑300)	argF ← / → PP_1080	ornithine carbamoyltransferase/molybdopterin‑binding oxidoreductase
RA	1,239,109	A→C	6.3%	intergenic (‑78/‑297)	argF ← / → PP_1080	ornithine carbamoyltransferase/molybdopterin‑binding oxidoreductase
RA	1,241,996	T→G	9.8%	intergenic (+55/+3)	grxD → / ← bfr‑II	monothiol glutaredoxin/bacterioferritin
RA	1,242,000	T→A	10.2%	*158L (TAA→TTA)	bfr‑II ←	bacterioferritin
RA	1,242,004	C→A	10.5%	E157* (GAG→TAG)	bfr‑II ←	bacterioferritin
RA	1,245,336	G→C	9.9%	A66A (GCC→GCG)	pyrC ←	dihydroorotase
RA	1,245,340	G→C	10.0%	P65R (CCG→CGG)	pyrC ←	dihydroorotase
RA	1,245,344	G→C	10.4%	R64G (CGC→GGC)	pyrC ←	dihydroorotase
RA	1,248,219	C→A	6.3%	intergenic (+26/+42)	argG → / ← PP_1089	argininosuccinate synthase/hypothetical protein
RA	1,248,220	T→C	7.0%	intergenic (+27/+41)	argG → / ← PP_1089	argininosuccinate synthase/hypothetical protein
RA	1,248,223	G→A	6.4%	intergenic (+30/+38)	argG → / ← PP_1089	argininosuccinate synthase/hypothetical protein
RA	1,248,224	T→G	6.9%	intergenic (+31/+37)	argG → / ← PP_1089	argininosuccinate synthase/hypothetical protein
RA	1,249,755	A→T	5.1%	intergenic (+22/+49)	bvgA → / ← PP_1091	virulence factors transcription regulator BvgA/hypothetical protein
RA	1,249,757	C→G	5.7%	intergenic (+24/+47)	bvgA → / ← PP_1091	virulence factors transcription regulator BvgA/hypothetical protein
RA	1,249,759	A→T	5.3%	intergenic (+26/+45)	bvgA → / ← PP_1091	virulence factors transcription regulator BvgA/hypothetical protein
RA	1,256,835	G→T	5.1%	intergenic (+76/+35)	mrp → / ← PP_mr14	ATP‑dependent Fe‑S cluster transferase/cspA regulatory region
RA	1,256,890	A→T	5.1%	noncoding (431/451 nt)	PP_mr14 ←	cspA regulatory region
RA	1,261,554	Δ1 bp	5.8%	coding (1087/1116 nt)	PP_1104 ←	AotO‑related protein
RA	1,266,695	A→T	6.2%	A433A (GCT→GCA)	quiP ←	acyl‑homoserine lactone acylase QuiP
RA	1,266,698	A→T	6.0%	A432A (GCT→GCA)	quiP ←	acyl‑homoserine lactone acylase QuiP
RA	1,275,090	G→C	10.8%	intergenic (‑281/+31)	PP_5462 ← / ← PP_5463	hypothetical protein/hypothetical protein
RA	1,275,093	G→C	12.7%	intergenic (‑284/+28)	PP_5462 ← / ← PP_5463	hypothetical protein/hypothetical protein
RA	1,281,197	A→T	6.1%	intergenic (+17/+26)	PP_5742 → / ← PP_1118	membrane protein/recombinase‑like protein
RA	1,281,200	A→T	6.3%	intergenic (+20/+23)	PP_5742 → / ← PP_1118	membrane protein/recombinase‑like protein
RA	1,286,864	A→T	5.8%	K81* (AAG→TAG) ‡	PP_1125 →	putative Helicase
RA	1,286,865	A→T	5.5%	K81M (AAG→ATG) ‡	PP_1125 →	putative Helicase
RA	1,289,852	Δ1 bp	6.4%	coding (1119/2349 nt)	PP_1126 →	hydrolase
RA	1,289,857	A→T	6.5%	N375I (AAT→ATT)	PP_1126 →	hydrolase
RA	1,289,861:1	+A	5.6%	coding (1128/2349 nt)	PP_1126 →	hydrolase
RA	1,291,468	A→C	10.2%	K85Q (AAG→CAG)	estC →	carboxylesterase
RA	1,293,261	T→G	6.4%	A286A (GCT→GCG)	PP_1128 →	OmpA family protein
RA	1,293,265	A→T	6.9%	K288* (AAG→TAG) ‡	PP_1128 →	OmpA family protein
RA	1,293,266	A→T	7.4%	K288M (AAG→ATG) ‡	PP_1128 →	OmpA family protein
RA	1,293,270	C→A	6.5%	A289A (GCC→GCA)	PP_1128 →	OmpA family protein
RA	1,307,446	C→G	13.9%	G60R (GGC→CGC)	livK ←	branched‑chain amino acids ABC transporter substrate‑binding protein
RA	1,307,447	C→G	13.8%	A59A (GCG→GCC)	livK ←	branched‑chain amino acids ABC transporter substrate‑binding protein
RA	1,307,455	T→G	9.3%	N57H (AAC→CAC)	livK ←	branched‑chain amino acids ABC transporter substrate‑binding protein
RA	1,308,611	C→G	6.6%	A42G (GCC→GGC)	PP_1143 →	3‑hydroxyisobutyrate dehydrogenase
RA	1,310,130	A→T	5.5%	L470Q (CTG→CAG)	PP_1144 ←	membrane protein
RA	1,310,136	A→T	5.5%	L468Q (CTG→CAG)	PP_1144 ←	membrane protein
RA	1,311,328	C→G	5.4%	A71P (GCA→CCA)	PP_1144 ←	membrane protein
RA	1,327,065	C→A	29.8%	intergenic (+35/‑258)	PP_16SE → / → PP_23SE	16S ribosomal RNA/23S ribosomal RNA
RA	1,327,127	C→T	41.3%	intergenic (+97/‑196)	PP_16SE → / → PP_23SE	16S ribosomal RNA/23S ribosomal RNA
RA	1,330,494	T→C	13.6%	intergenic (+19/‑288)	PP_5SE → / → PP_1157	5S ribosomal RNA/acetolactate synthase
RA	1,330,500	C→T	13.6%	intergenic (+25/‑282)	PP_5SE → / → PP_1157	5S ribosomal RNA/acetolactate synthase
RA	1,330,501	A→G	13.5%	intergenic (+26/‑281)	PP_5SE → / → PP_1157	5S ribosomal RNA/acetolactate synthase
RA	1,330,507	G→A	12.3%	intergenic (+32/‑275)	PP_5SE → / → PP_1157	5S ribosomal RNA/acetolactate synthase
RA	1,333,762:1	+A	7.5%	coding (82/1155 nt)	PP_1159 →	membrane protein
RA	1,337,042	C→A	6.3%	L137I (CTC→ATC) ‡	gstA →	glutathione S‑transferase GstA
RA	1,337,043	T→G	6.4%	L137R (CTC→CGC) ‡	gstA →	glutathione S‑transferase GstA
RA	1,344,106	G→T	5.5%	P13T (CCT→ACT)	PP_1168 ←	TRAP dicarboxylate transporter subunit DctQ
RA	1,344,113	G→C	7.9%	A10A (GCC→GCG) ‡	PP_1168 ←	TRAP dicarboxylate transporter subunit DctQ
RA	1,344,114	G→C	7.7%	A10G (GCC→GGC) ‡	PP_1168 ←	TRAP dicarboxylate transporter subunit DctQ
RA	1,345,459	G→C	7.1%	A204G (GCC→GGC)	gnl ←	gluconolactonase
RA	1,350,507	T→A	10.9%	K11N (AAA→AAT) ‡	PP_1176 ←	hypothetical protein
RA	1,350,508	T→A	9.8%	K11I (AAA→ATA) ‡	PP_1176 ←	hypothetical protein
RA	1,354,159	A→T	7.0%	P408P (CCT→CCA)	nrdA ←	ribonucleoside‑diphosphate reductase subunit alpha
RA	1,354,271	G→T	6.6%	S371Y (TCC→TAC) ‡	nrdA ←	ribonucleoside‑diphosphate reductase subunit alpha
RA	1,354,272	A→C	6.7%	S371A (TCC→GCC) ‡	nrdA ←	ribonucleoside‑diphosphate reductase subunit alpha
RA	1,356,411	G→C	15.6%	G94A (GGC→GCC)	PP_1181 →	two‑component system response regulator
RA	1,361,434	T→C	5.3%	H164H (CAT→CAC)	phoP →	two‑component system DNA‑binding transcriptional regulator
RA	1,361,439	A→T	6.0%	Q166L (CAG→CTG)	phoP →	two‑component system DNA‑binding transcriptional regulator
RA	1,361,442	A→T	6.0%	Q167L (CAG→CTG)	phoP →	two‑component system DNA‑binding transcriptional regulator
RA	1,361,553	A→C	5.1%	E204A (GAG→GCG)	phoP →	two‑component system DNA‑binding transcriptional regulator
RA	1,366,554	T→G	5.5%	E51A (GAG→GCG)	PP_1191 ←	S4 domain‑containing protein
RA	1,366,557	A→T	5.2%	V50D (GTC→GAC)	PP_1191 ←	S4 domain‑containing protein
RA	1,376,327	A→T	7.1%	intergenic (+30/+19)	kup → / ← PP_1201	potassium transport system protein Kup/hypothetical protein
RA	1,376,328	G→C	7.9%	intergenic (+31/+18)	kup → / ← PP_1201	potassium transport system protein Kup/hypothetical protein
RA	1,376,329	A→T	7.0%	intergenic (+32/+17)	kup → / ← PP_1201	potassium transport system protein Kup/hypothetical protein
RA	1,382,332	A→T	8.1%	intergenic (+12/+15)	dinB → / ← PP_1204	DNA polymerase IV/lipoprotein
JC	1,385,477	Δ42 bp	68.2%	coding (945‑986/1266 nt)	oprD ←	basic amino acid specific porin OprD
RA	1,389,952	C→G	8.9%	A23G (GCC→GGC)	PP_1212 →	hypothetical protein
RA	1,389,957	C→G	9.6%	P25A (CCG→GCG)	PP_1212 →	hypothetical protein
RA	1,391,996	C→T	6.2%	intergenic (+21/‑94)	aspS → / → PP_1214	aspartate‑‑tRNA ligase/transcriptional regulator
RA	1,391,997	A→G	6.2%	intergenic (+22/‑93)	aspS → / → PP_1214	aspartate‑‑tRNA ligase/transcriptional regulator
RA	1,400,878	C→A	5.8%	intergenic (+35/‑134)	ybgF → / → queE	TolQRA transport system periplasmic protein/7‑carboxy‑7‑deazaguanine synthase
RA	1,403,596	G→A	10.9%	intergenic (‑56/+25)	PP_1227 ← / ← PP_1228	membrane protein/methyl‑accepting chemotaxis transducer
RA	1,403,597	T→C	11.2%	intergenic (‑57/+24)	PP_1227 ← / ← PP_1228	membrane protein/methyl‑accepting chemotaxis transducer
RA	1,413,439	T→A	7.3%	N155I (AAC→ATC) ‡	PP_1235 ←	AhpC/TSA family protein
RA	1,413,440	T→A	7.3%	N155Y (AAC→TAC) ‡	PP_1235 ←	AhpC/TSA family protein
RA	1,416,868	G→A	9.6%	R37Q (CGG→CAG)	PP_1239 →	metallo‑beta‑lactamase family protein
RA	1,416,874	T→A	9.5%	L39Q (CTG→CAG)	PP_1239 →	metallo‑beta‑lactamase family protein
RA	1,416,880	T→C	7.5%	L41P (CTG→CCG)	PP_1239 →	metallo‑beta‑lactamase family protein
RA	1,417,334	Δ1 bp	8.5%	coding (576/759 nt)	PP_1239 →	metallo‑beta‑lactamase family protein
RA	1,417,338:1	+A	8.6%	coding (580/759 nt)	PP_1239 →	metallo‑beta‑lactamase family protein
RA	1,419,552	T→A	5.6%	intergenic (‑35/+102)	PP_1242 ← / ← PP_1244	hypothetical protein/hypothetical protein
RA	1,424,258	A→C	6.4%	E321A (GAG→GCG) ‡	PP_5467 →	hypothetical protein
RA	1,424,259	G→C	6.6%	E321D (GAG→GAC) ‡	PP_5467 →	hypothetical protein
RA	1,424,260	G→T	6.1%	A322S (GCT→TCT)	PP_5467 →	hypothetical protein
RA	1,425,657	T→C	8.4%	intergenic (+52/‑453)	PP_1249 → / → PP_1250	DUF4223 domain‑containing protein/group II intron‑encoding maturase
RA	1,425,662	C→T	8.2%	intergenic (+57/‑448)	PP_1249 → / → PP_1250	DUF4223 domain‑containing protein/group II intron‑encoding maturase
RA	1,425,663	A→G	8.4%	intergenic (+58/‑447)	PP_1249 → / → PP_1250	DUF4223 domain‑containing protein/group II intron‑encoding maturase
RA	1,425,668	G→A	9.5%	intergenic (+63/‑442)	PP_1249 → / → PP_1250	DUF4223 domain‑containing protein/group II intron‑encoding maturase
RA	1,433,056	A→T	5.3%	intergenic (+37/+87)	xenA → / ← PP_1255	protein XenA/cis‑4‑hydroxy‑D‑proline oxidase
RA	1,433,057	A→T	5.3%	intergenic (+38/+86)	xenA → / ← PP_1255	protein XenA/cis‑4‑hydroxy‑D‑proline oxidase
RA	1,435,225	A→T	6.2%	L249Q (CTG→CAG)	PP_1256 ←	alpha‑ketoglutarate semialdehyde dehydrogenase
RA	1,435,822	A→T	6.8%	L50Q (CTG→CAG)	PP_1256 ←	alpha‑ketoglutarate semialdehyde dehydrogenase
RA	1,435,829	A→T	7.6%	C48S (TGC→AGC)	PP_1256 ←	alpha‑ketoglutarate semialdehyde dehydrogenase
RA	1,457,924	T→G	14.3%	V92V (GTT→GTG)	PP_1276 →	hypothetical protein
RA	1,457,925	C→A	14.5%	H93N (CAC→AAC)	PP_1276 →	hypothetical protein
RA	1,462,291	G→C	8.0%	A214G (GCC→GGC)	algI ←	alginate O‑acetylase AlgI
RA	1,464,203	G→A	6.5%	T474T (ACC→ACT) ‡	algX ←	alginate biosynthesis protein AlgX
RA	1,464,205	T→A	6.5%	T474S (ACC→TCC) ‡	algX ←	alginate biosynthesis protein AlgX
RA	1,464,207	T→C	6.4%	Q473R (CAG→CGG)	algX ←	alginate biosynthesis protein AlgX
RA	1,475,002	T→G	12.7%	intergenic (‑775/+26)	algD ← / ← PP_1289	GDP‑mannose 6‑dehydrogenase/DUF328 domain‑containing protein
RA	1,475,003	C→A	14.2%	intergenic (‑776/+25)	algD ← / ← PP_1289	GDP‑mannose 6‑dehydrogenase/DUF328 domain‑containing protein
RA	1,478,193	C→A	6.1%	G280G (GGC→GGA)	PP_1291 →	PhoH family protein
RA	1,478,198	C→G	6.4%	A282G (GCC→GGC)	PP_1291 →	PhoH family protein
RA	1,478,203	T→G	6.0%	S284A (TCC→GCC)	PP_1291 →	PhoH family protein
RA	1,481,522	T→C	6.0%	S75G (AGC→GGC)	rhlB ←	ATP‑dependent RNA helicase RhlB
RA	1,481,523	G→A	6.4%	A74A (GCC→GCT)	rhlB ←	ATP‑dependent RNA helicase RhlB
RA	1,484,921	A→G	5.6%	N331S (AAC→AGC)	yhdX →	amino acid ABC transporter permease
RA	1,485,015	C→G	7.1%	I362M (ATC→ATG)	yhdX →	amino acid ABC transporter permease
RA	1,485,018	C→G	7.4%	A363A (GCC→GCG)	yhdX →	amino acid ABC transporter permease
RA	1,487,103	C→T	6.4%	intergenic (+112/+18)	yhdZ → / ← degS	amino acid ABC transporter ATP‑binding protein/serine endoprotease DegS
RA	1,488,056	T→A	6.9%	N92Y (AAC→TAC)	degS ←	serine endoprotease DegS
RA	1,488,064	T→A	9.7%	K89M (AAG→ATG) ‡	degS ←	serine endoprotease DegS
RA	1,488,065	T→A	10.6%	K89* (AAG→TAG) ‡	degS ←	serine endoprotease DegS
RA	1,488,073	T→A	6.9%	Y86F (TAC→TTC)	degS ←	serine endoprotease DegS
RA	1,497,820	T→G	5.0%	F134C (TTC→TGC)	PP_1310 →	hypothetical protein
RA	1,497,841	T→G	6.6%	M141R (ATG→AGG)	PP_1310 →	hypothetical protein
RA	1,497,846	C→A	6.0%	L143M (CTG→ATG)	PP_1310 →	hypothetical protein
RA	1,504,076	T→A	5.4%	intergenic (+34/‑229)	rpsI → / → petA	30S ribosomal protein S9/ubiquinol‑cytochrome c reductase iron‑sulfur subunit
RA	1,504,077	T→A	5.4%	intergenic (+35/‑228)	rpsI → / → petA	30S ribosomal protein S9/ubiquinol‑cytochrome c reductase iron‑sulfur subunit
RA	1,506,932	A→G	26.1%	intergenic (+44/‑73)	petC → / → sspA	ubiquinol‑‑cytochrome c reductase cytochrome c1 subunit/stringent starvation protein A
RA	1,506,936	G→A	27.7%	intergenic (+48/‑69)	petC → / → sspA	ubiquinol‑‑cytochrome c reductase cytochrome c1 subunit/stringent starvation protein A
RA	1,506,939	T→C	27.3%	intergenic (+51/‑66)	petC → / → sspA	ubiquinol‑‑cytochrome c reductase cytochrome c1 subunit/stringent starvation protein A
RA	1,506,943	C→T	26.1%	intergenic (+55/‑62)	petC → / → sspA	ubiquinol‑‑cytochrome c reductase cytochrome c1 subunit/stringent starvation protein A
RA	1,508,087	G→A	13.3%	intergenic (+17/+45)	sspB → / ← PP_1322	ClpXP protease specificity‑enhancing factor/lipoprotein
RA	1,508,088	G→T	13.1%	intergenic (+18/+44)	sspB → / ← PP_1322	ClpXP protease specificity‑enhancing factor/lipoprotein
RA	1,508,089	A→C	13.2%	intergenic (+19/+43)	sspB → / ← PP_1322	ClpXP protease specificity‑enhancing factor/lipoprotein
RA	1,508,090	T→C	13.2%	intergenic (+20/+42)	sspB → / ← PP_1322	ClpXP protease specificity‑enhancing factor/lipoprotein
RA	1,509,433	T→G	11.9%	H110P (CAT→CCT)	PP_1324 ←	endonuclease
RA	1,509,437	G→A	12.2%	H109Y (CAC→TAC)	PP_1324 ←	endonuclease
RA	1,509,440	T→C	11.6%	S108G (AGC→GGC)	PP_1324 ←	endonuclease
RA	1,509,444	C→A	10.5%	Q106H (CAG→CAT)	PP_1324 ←	endonuclease
RA	1,526,622	T→A	8.6%	I256N (ATT→AAT)	ddlB →	D‑alanine‑‑D‑alanine ligase B
RA	1,526,631	A→C	5.6%	E259A (GAA→GCA)	ddlB →	D‑alanine‑‑D‑alanine ligase B
RA	1,534,921	G→A	8.1%	intergenic (+70/‑113)	secA → / → argJ	protein translocase subunit SecA/glutamate N‑acetyltransferase/amino acid acetyltransferase
RA	1,534,923	T→G	6.9%	intergenic (+72/‑111)	secA → / → argJ	protein translocase subunit SecA/glutamate N‑acetyltransferase/amino acid acetyltransferase
RA	1,534,925	C→T	7.0%	intergenic (+74/‑109)	secA → / → argJ	protein translocase subunit SecA/glutamate N‑acetyltransferase/amino acid acetyltransferase
RA	1,534,931	T→C	10.9%	intergenic (+80/‑103)	secA → / → argJ	protein translocase subunit SecA/glutamate N‑acetyltransferase/amino acid acetyltransferase
RA	1,534,935	C→T	10.2%	intergenic (+84/‑99)	secA → / → argJ	protein translocase subunit SecA/glutamate N‑acetyltransferase/amino acid acetyltransferase
RA	1,534,940	A→G	11.1%	intergenic (+89/‑94)	secA → / → argJ	protein translocase subunit SecA/glutamate N‑acetyltransferase/amino acid acetyltransferase
RA	1,534,944	G→A	10.8%	intergenic (+93/‑90)	secA → / → argJ	protein translocase subunit SecA/glutamate N‑acetyltransferase/amino acid acetyltransferase
RA	1,534,950	A→G	9.2%	intergenic (+99/‑84)	secA → / → argJ	protein translocase subunit SecA/glutamate N‑acetyltransferase/amino acid acetyltransferase
RA	1,534,952	C→A	8.8%	intergenic (+101/‑82)	secA → / → argJ	protein translocase subunit SecA/glutamate N‑acetyltransferase/amino acid acetyltransferase
RA	1,534,954	T→C	9.0%	intergenic (+103/‑80)	secA → / → argJ	protein translocase subunit SecA/glutamate N‑acetyltransferase/amino acid acetyltransferase
RA	1,534,961	G→A	6.6%	intergenic (+110/‑73)	secA → / → argJ	protein translocase subunit SecA/glutamate N‑acetyltransferase/amino acid acetyltransferase
RA	1,535,901	G→T	7.4%	G290C (GGC→TGC)	argJ →	glutamate N‑acetyltransferase/amino acid acetyltransferase
RA	1,535,904	A→C	7.5%	N291H (AAC→CAC)	argJ →	glutamate N‑acetyltransferase/amino acid acetyltransferase
RA	1,538,783	T→A	6.0%	K610M (AAG→ATG) ‡	PP_1350 ←	two‑component system sensor histidine kinase/response regulator
RA	1,538,784	T→A	6.0%	K610* (AAG→TAG) ‡	PP_1350 ←	two‑component system sensor histidine kinase/response regulator
RA	1,544,531	C→A	15.2%	intergenic (+48/+66)	mdfA → / ← ampG	multidrug MFS transporter/muropeptide permease AmpG
RA	1,544,534	G→C	14.1%	intergenic (+51/+63)	mdfA → / ← ampG	multidrug MFS transporter/muropeptide permease AmpG
RA	1,544,536	C→G	14.7%	intergenic (+53/+61)	mdfA → / ← ampG	multidrug MFS transporter/muropeptide permease AmpG
RA	1,544,541	C→G	14.7%	intergenic (+58/+56)	mdfA → / ← ampG	multidrug MFS transporter/muropeptide permease AmpG
RA	1,544,543	G→C	14.7%	intergenic (+60/+54)	mdfA → / ← ampG	multidrug MFS transporter/muropeptide permease AmpG
RA	1,544,546	T→G	15.0%	intergenic (+63/+51)	mdfA → / ← ampG	multidrug MFS transporter/muropeptide permease AmpG
RA	1,544,577	A→G	6.0%	intergenic (+94/+20)	mdfA → / ← ampG	multidrug MFS transporter/muropeptide permease AmpG
RA	1,547,946	C→A	7.5%	L71M (CTG→ATG) ‡	PP_1358 →	heme iron utilization protein
RA	1,547,947	T→G	7.5%	L71R (CTG→CGG) ‡	PP_1358 →	heme iron utilization protein
RA	1,550,517	T→G	6.9%	I292S (ATC→AGC)	groL →	chaperonin GroEL
RA	1,550,520	C→A	6.6%	A293D (GCT→GAT)	groL →	chaperonin GroEL
RA	1,551,324	G→T	14.1%	intergenic (+41/+85)	groL → / ← pykA	chaperonin GroEL/pyruvate kinase II
RA	1,551,327	A→C	13.3%	intergenic (+44/+82)	groL → / ← pykA	chaperonin GroEL/pyruvate kinase II
RA	1,557,402	C→G	6.8%	G271G (GGG→GGC)	PP_1368 ←	glycosyltransferase domain‑containing protein
RA	1,557,407	C→G	5.9%	A270P (GCC→CCC)	PP_1368 ←	glycosyltransferase domain‑containing protein
RA	1,580,646	C→T	10.1%	V265I (GTC→ATC)	ttgB ←	efflux pump membrane protein TtgB
RA	1,580,647	A→G	9.1%	D264D (GAT→GAC)	ttgB ←	efflux pump membrane protein TtgB
RA	1,582,815	C→A	10.0%	intergenic (‑219/‑39)	ttgA ← / → ttgR	efflux pump periplasmic linker TtgA/HTH‑type transcriptional regulator TtgR
RA	1,582,822	T→A	10.3%	intergenic (‑226/‑32)	ttgA ← / → ttgR	efflux pump periplasmic linker TtgA/HTH‑type transcriptional regulator TtgR
RA	1,582,829	T→G	10.9%	intergenic (‑233/‑25)	ttgA ← / → ttgR	efflux pump periplasmic linker TtgA/HTH‑type transcriptional regulator TtgR
RA	1,592,024	C→A	15.0%	intergenic (‑89/‑114)	PP_1395 ← / → PP_1396	AraC family transcriptional regulator/hypothetical protein
RA	1,592,029	T→G	14.9%	intergenic (‑94/‑109)	PP_1395 ← / → PP_1396	AraC family transcriptional regulator/hypothetical protein
RA	1,594,291	T→C	8.8%	T392A (ACC→GCC)	kgtP ←	alpha‑ketoglutarate permease
RA	1,594,292	G→A	8.2%	G391G (GGC→GGT)	kgtP ←	alpha‑ketoglutarate permease
RA	1,594,526	A→C	5.5%	R313R (CGT→CGG)	kgtP ←	alpha‑ketoglutarate permease
RA	1,594,529	G→C	6.0%	R312R (CGC→CGG)	kgtP ←	alpha‑ketoglutarate permease
RA	1,594,532	G→T	5.9%	G311G (GGC→GGA)	kgtP ←	alpha‑ketoglutarate permease
RA	1,595,861	C→T	5.4%	A398T (GCG→ACG)	dctD‑III ←	C4‑dicarboxylate transport transcriptional regulator
RA	1,596,415	A→T	6.4%	L213Q (CTG→CAG)	dctD‑III ←	C4‑dicarboxylate transport transcriptional regulator
RA	1,598,894	T→G	6.3%	intergenic (‑91/+40)	dctB ← / ← bglX	C4‑dicarboxylate transport sensor protein/beta‑D‑glucoside glucohydrolase
RA	1,602,562	C→T	5.1%	Q123* (CAG→TAG)	PP_5469 →	SAM‑dependent methyltransferase
RA	1,606,449	A→T	6.2%	intergenic (‑157/+54)	PP_1407 ← / ← PP_t64	sulfate transporter/tRNA‑Gly
RA	1,606,450	A→T	6.0%	intergenic (‑158/+53)	PP_1407 ← / ← PP_t64	sulfate transporter/tRNA‑Gly
RA	1,620,389	Δ1 bp	6.7%	intergenic (‑113/‑88)	opdH ← / → tctD	tricarboxylate‑specific outer membrane porin/transcriptional regulator TctD
RA	1,620,391:1	+C	6.8%	intergenic (‑115/‑86)	opdH ← / → tctD	tricarboxylate‑specific outer membrane porin/transcriptional regulator TctD
RA	1,621,919	T→C	7.1%	L264P (CTG→CCG) ‡	PP_1421 →	sensor histidine kinase TctE
RA	1,621,920	G→A	7.0%	L264L (CTG→CTA) ‡	PP_1421 →	sensor histidine kinase TctE
RA	1,622,230	G→A	11.0%	E368K (GAG→AAG) ‡	PP_1421 →	sensor histidine kinase TctE
RA	1,622,232	G→C	11.3%	E368D (GAG→GAC) ‡	PP_1421 →	sensor histidine kinase TctE
RA	1,622,234	T→C	10.6%	L369S (TTG→TCG)	PP_1421 →	sensor histidine kinase TctE
RA	1,623,232	T→A	6.6%	D56V (GAC→GTC)	PP_1422 ←	hypothetical protein
RA	1,625,249	G→T	13.1%	intergenic (+30/+27)	PP_1425 → / ← nadB	hypothetical protein/L‑aspartate oxidase
RA	1,625,250	A→C	12.1%	intergenic (+31/+26)	PP_1425 → / ← nadB	hypothetical protein/L‑aspartate oxidase
RA	1,632,135	C→T	7.6%	P283S (CCT→TCT) ‡	lepA →	elongation factor 4
RA	1,632,137	T→A	7.4%	P283P (CCT→CCA) ‡	lepA →	elongation factor 4
RA	1,632,139	A→G	7.3%	E284G (GAG→GGG)	lepA →	elongation factor 4
RA	1,637,357	T→C	11.7%	intergenic (+24/+42)	pdxJ → / ← PP_1437	pyridoxine 5'‑phosphate synthase/heavy metal sensor histidine kinase
RA	1,637,367	A→T	16.8%	intergenic (+34/+32)	pdxJ → / ← PP_1437	pyridoxine 5'‑phosphate synthase/heavy metal sensor histidine kinase
RA	1,637,368	A→T	15.9%	intergenic (+35/+31)	pdxJ → / ← PP_1437	pyridoxine 5'‑phosphate synthase/heavy metal sensor histidine kinase
RA	1,637,378	G→A	9.7%	intergenic (+45/+21)	pdxJ → / ← PP_1437	pyridoxine 5'‑phosphate synthase/heavy metal sensor histidine kinase
RA	1,637,394	G→A	5.5%	intergenic (+61/+5)	pdxJ → / ← PP_1437	pyridoxine 5'‑phosphate synthase/heavy metal sensor histidine kinase
RA	1,639,607	A→G	7.1%	intergenic (‑155/‑156)	czcR‑III ← / → PP_1439	response regulator/hypothetical protein
RA	1,639,617	C→T	5.4%	intergenic (‑165/‑146)	czcR‑III ← / → PP_1439	response regulator/hypothetical protein
RA	1,639,618	G→T	6.3%	intergenic (‑166/‑145)	czcR‑III ← / → PP_1439	response regulator/hypothetical protein
RA	1,639,622	G→A	5.5%	intergenic (‑170/‑141)	czcR‑III ← / → PP_1439	response regulator/hypothetical protein
RA	1,639,627	A→C	5.3%	intergenic (‑175/‑136)	czcR‑III ← / → PP_1439	response regulator/hypothetical protein
RA	1,639,628	A→G	5.7%	intergenic (‑176/‑135)	czcR‑III ← / → PP_1439	response regulator/hypothetical protein
RA	1,639,638	C→T	5.8%	intergenic (‑186/‑125)	czcR‑III ← / → PP_1439	response regulator/hypothetical protein
RA	1,642,306	G→A	8.7%	intergenic (‑92/+60)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,642,313	G→C	11.4%	intergenic (‑99/+53)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,642,319	Δ1 bp	7.6%	intergenic (‑105/+47)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,642,321:1	+C	7.6%	intergenic (‑107/+45)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,642,327	G→C	11.1%	intergenic (‑113/+39)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,642,334	T→C	10.8%	intergenic (‑120/+32)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,642,343	G→A	6.9%	intergenic (‑129/+23)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,642,345	C→T	7.2%	intergenic (‑131/+21)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,647,612	G→A	15.9%	D384D (GAC→GAT)	oprB‑II ←	carbohydrate‑selective porin
RA	1,649,375	T→G	5.0%	E576A (GAG→GCG) ‡	PP_1446 ←	TonB‑dependent receptor
RA	1,649,376	C→A	7.4%	E576* (GAG→TAG) ‡	PP_1446 ←	TonB‑dependent receptor
RA	1,649,537	T→C	9.2%	H522R (CAT→CGT)	PP_1446 ←	TonB‑dependent receptor
RA	1,656,533	T→C	5.1%	Q93R (CAA→CGA)	PP_1449 ←	hypothetical protein
RA	1,656,536	G→A	5.3%	S92L (TCG→TTG)	PP_1449 ←	hypothetical protein
RA	1,656,541	C→G	5.4%	G90G (GGG→GGC)	PP_1449 ←	hypothetical protein
RA	1,667,944	A→G	6.2%	S302G (AGC→GGC)	ffh →	signal recognition particle GTPase subunit
RA	1,667,950	A→C	7.4%	I304L (ATC→CTC)	ffh →	signal recognition particle GTPase subunit
RA	1,667,955	G→T	6.5%	E305D (GAG→GAT)	ffh →	signal recognition particle GTPase subunit
RA	1,667,961	C→T	7.6%	A307A (GCC→GCT)	ffh →	signal recognition particle GTPase subunit
RA	1,668,470	G→A	7.3%	intergenic (+53/‑129)	ffh → / → rpsP	signal recognition particle GTPase subunit/30S ribosomal protein S16
RA	1,668,471	T→C	7.5%	intergenic (+54/‑128)	ffh → / → rpsP	signal recognition particle GTPase subunit/30S ribosomal protein S16
RA	1,676,202	C→G	6.9%	intergenic (+22/‑38)	hom → / → thrC	homoserine dehydrogenase/threonine synthase
RA	1,683,290	C→G	13.9%	intergenic (+57/‑174)	recJ → / → PP_1478	ssDNA‑specific exonuclease RecJ/xenobiotic reductase
RA	1,683,293	C→G	13.6%	intergenic (+60/‑171)	recJ → / → PP_1478	ssDNA‑specific exonuclease RecJ/xenobiotic reductase
RA	1,684,314	T→C	7.0%	F284S (TTT→TCT)	PP_1478 →	xenobiotic reductase
RA	1,684,319	G→A	6.9%	E286K (GAG→AAG)	PP_1478 →	xenobiotic reductase
RA	1,691,814	T→C	7.2%	intergenic (+39/‑132)	PP_1487 → / → PP_1488	hypothetical protein/methyl‑accepting chemotaxis transducer
RA	1,691,815	C→G	7.4%	intergenic (+40/‑131)	PP_1487 → / → PP_1488	hypothetical protein/methyl‑accepting chemotaxis transducer
RA	1,691,825	C→A	9.8%	intergenic (+50/‑121)	PP_1487 → / → PP_1488	hypothetical protein/methyl‑accepting chemotaxis transducer
RA	1,691,828	T→G	9.7%	intergenic (+53/‑118)	PP_1487 → / → PP_1488	hypothetical protein/methyl‑accepting chemotaxis transducer
RA	1,693,832	C→A	5.4%	R87S (CGC→AGC) ‡	PP_1489 →	CheW domain‑containing protein
RA	1,693,834	C→G	8.4%	R87R (CGC→CGG) ‡	PP_1489 →	CheW domain‑containing protein
RA	1,695,062	C→G	6.3%	A329G (GCC→GGC)	wspC →	biofilm formation methyltransferase WspC
RA	1,695,065	G→A	6.1%	R330Q (CGG→CAG)	wspC →	biofilm formation methyltransferase WspC
RA	1,695,068	T→C	6.9%	L331P (CTG→CCG)	wspC →	biofilm formation methyltransferase WspC
RA	1,695,071	C→G	6.5%	A332G (GCC→GGC)	wspC →	biofilm formation methyltransferase WspC
RA	1,698,852	Δ1 bp	5.9%	coding (558/1014 nt)	cheBC →	chemotaxis response regulator protein‑glutamate methylesterase
RA	1,698,856:1	+C	6.1%	coding (562/1014 nt)	cheBC →	chemotaxis response regulator protein‑glutamate methylesterase
RA	1,703,290	A→G	9.9%	intergenic (+97/‑70)	lysS → / → PP_1497	lysine‑‑tRNA ligase/TetR family transcriptional regulator
RA	1,703,292	G→C	10.1%	intergenic (+99/‑68)	lysS → / → PP_1497	lysine‑‑tRNA ligase/TetR family transcriptional regulator
RA	1,703,294	C→T	9.9%	intergenic (+101/‑66)	lysS → / → PP_1497	lysine‑‑tRNA ligase/TetR family transcriptional regulator
RA	1,703,294:1	+T	12.1%	intergenic (+101/‑66)	lysS → / → PP_1497	lysine‑‑tRNA ligase/TetR family transcriptional regulator
RA	1,704,678	T→A	11.9%	M1M (TTG→ATG) †‡	PP_1499 →	hypothetical protein
RA	1,704,679	T→A	12.7%	M1* (TTG→TAG) †‡	PP_1499 →	hypothetical protein
RA	1,707,269	G→C	8.3%	intergenic (+45/+97)	PP_1501 → / ← PP_1502	hypothetical protein/OmpA family protein
RA	1,707,272	G→C	8.0%	intergenic (+48/+94)	PP_1501 → / ← PP_1502	hypothetical protein/OmpA family protein
RA	1,707,330:1	+A	8.0%	intergenic (+106/+36)	PP_1501 → / ← PP_1502	hypothetical protein/OmpA family protein
RA	1,707,335	Δ1 bp	7.7%	intergenic (+111/+31)	PP_1501 → / ← PP_1502	hypothetical protein/OmpA family protein
RA	1,708,205	G→C	5.4%	intergenic (‑48/+3)	PP_1502 ← / ← PP_1503	OmpA family protein/hypothetical protein
RA	1,708,217	G→C	6.7%	S154R (AGC→AGG)	PP_1503 ←	hypothetical protein
RA	1,712,993	T→A	8.6%	intergenic (+34/‑106)	adk → / → tsaB	adenylate kinase/endopeptidase
RA	1,712,994	T→A	8.5%	intergenic (+35/‑105)	adk → / → tsaB	adenylate kinase/endopeptidase
RA	1,713,554	G→T	5.8%	P152P (CCG→CCT)	tsaB →	endopeptidase
RA	1,713,557	A→C	5.9%	A153A (GCA→GCC)	tsaB →	endopeptidase
RA	1,718,111	G→C	9.0%	L256F (TTG→TTC)	rsmJ →	ribosomal RNA small subunit methyltransferase J
RA	1,724,495	T→A	9.9%	intergenic (+20/+29)	PP_1517 → / ← PP_1518	RND family transporter/hypothetical protein
RA	1,726,527	A→T	12.2%	L560Q (CTG→CAG)	plsB ←	glycerol‑3‑phosphate acyltransferase
RA	1,726,530	A→T	12.1%	L559Q (CTG→CAG)	plsB ←	glycerol‑3‑phosphate acyltransferase
RA	1,739,824	T→A	8.5%	intergenic (‑16/+41)	PP_1534 ← / ← PP_1535	hypothetical protein/putative Methyltransferase
RA	1,751,022	C→G	6.8%	D113E (GAC→GAG)	PP_1551 →	replication protein O
RA	1,761,302	C→T	9.2%	G136G (GGC→GGT)	PP_1567 →	capsid protein
RA	1,761,303	A→G	9.2%	T137A (ACC→GCC)	PP_1567 →	capsid protein
RA	1,781,636	A→T	5.0%	L828Q (CTG→CAG)	glnD ←	uridylyltransferase
RA	1,781,639	A→T	5.0%	L827Q (CTG→CAG)	glnD ←	uridylyltransferase
RA	1,782,577	C→A	8.1%	Q514H (CAG→CAT) ‡	glnD ←	uridylyltransferase
RA	1,782,578	T→G	8.3%	Q514P (CAG→CCG) ‡	glnD ←	uridylyltransferase
RA	1,787,179	G→T	5.2%	intergenic (+104/‑78)	tsf → / → pyrH	elongation factor Ts/uridylate kinase
RA	1,791,876	G→C	7.3%	G162R (GGT→CGT)	rseP →	regulatory intramembrane protein RIP
RA	1,802,115	Δ1 bp	5.0%	coding (2057/3525 nt)	dnaEA →	DNA polymerase III subunit alpha
RA	1,810,377	T→G	10.9%	intergenic (+96/‑73)	eno → / → ftsB	enolase/cell division protein
RA	1,810,378	C→A	10.8%	intergenic (+97/‑72)	eno → / → ftsB	enolase/cell division protein
RA	1,818,526	A→G	6.3%	Y209C (TAC→TGC)	PP_1622 →	M23B subfamily metallopeptidase
RA	1,818,531	C→T	6.5%	H211Y (CAT→TAT)	PP_1622 →	M23B subfamily metallopeptidase
RA	1,818,534	A→G	6.6%	N212D (AAC→GAC)	PP_1622 →	M23B subfamily metallopeptidase
RA	1,818,539	C→T	6.1%	R213R (CGC→CGT)	PP_1622 →	M23B subfamily metallopeptidase
RA	1,825,133	G→C	11.0%	R55G (CGC→GGC)	mutS ←	DNA mismatch repair protein MutS
RA	1,825,134	G→C	10.7%	A54A (GCC→GCG)	mutS ←	DNA mismatch repair protein MutS
RA	1,831,819	G→A	7.9%	R219Q (CGG→CAG)	yfiP →	hypothetical protein
RA	1,831,822	T→C	9.6%	L220P (CTG→CCG)	yfiP →	hypothetical protein
RA	1,845,825	T→C	9.6%	L25P (CTC→CCC)	pfeS‑II →	histidine kinase
RA	1,845,829	T→G	9.2%	S26R (AGT→AGG)	pfeS‑II →	histidine kinase
RA	1,845,834	C→A	9.4%	T28N (ACC→AAC)	pfeS‑II →	histidine kinase
RA	1,845,838	G→A	10.7%	W29* (TGG→TGA)	pfeS‑II →	histidine kinase
RA	1,848,840	T→G	5.0%	L80R (CTG→CGG)	cysM →	cysteine synthase B
RA	1,851,157	A→C	6.3%	A67A (GCA→GCC)	relA →	ATP:GTP 3'‑pyrophosphotransferase
RA	1,851,158	G→T	7.4%	G68C (GGC→TGC)	relA →	ATP:GTP 3'‑pyrophosphotransferase
JC	1,851,531	+CTA	92.3%	coding (575/2241 nt)	relA →	ATP:GTP 3'‑pyrophosphotransferase
RA	1,859,143	C→A	5.2%	intergenic (+21/+80)	PP_1661 → / ← PP_1662	dehydrogenase/hypothetical protein
RA	1,859,144	G→A	5.2%	intergenic (+22/+79)	PP_1661 → / ← PP_1662	dehydrogenase/hypothetical protein
RA	1,859,150	C→G	7.8%	intergenic (+28/+73)	PP_1661 → / ← PP_1662	dehydrogenase/hypothetical protein
RA	1,859,156	A→T	8.2%	intergenic (+34/+67)	PP_1661 → / ← PP_1662	dehydrogenase/hypothetical protein
RA	1,859,162	C→G	7.5%	intergenic (+40/+61)	PP_1661 → / ← PP_1662	dehydrogenase/hypothetical protein
RA	1,859,169	T→G	5.6%	intergenic (+47/+54)	PP_1661 → / ← PP_1662	dehydrogenase/hypothetical protein
RA	1,859,569	A→C	8.6%	intergenic (‑119/+37)	PP_1662 ← / ← PP_1663	hypothetical protein/hypothetical protein
RA	1,859,571	T→A	8.7%	intergenic (‑121/+35)	PP_1662 ← / ← PP_1663	hypothetical protein/hypothetical protein
RA	1,859,573	G→T	8.6%	intergenic (‑123/+33)	PP_1662 ← / ← PP_1663	hypothetical protein/hypothetical protein
RA	1,863,282	T→A	8.3%	L309Q (CTG→CAG)	PP_1666 →	hypothetical protein
RA	1,870,187	G→T	12.6%	G112V (GGC→GTC)	cobD →	Subunit of adenosylcobinamide‑phosphate synthase beta component
RA	1,870,190	A→C	10.4%	D113A (GAC→GCC)	cobD →	Subunit of adenosylcobinamide‑phosphate synthase beta component
RA	1,871,418	T→A	7.8%	L217Q (CTG→CAG)	cobC →	adenosylcobinamide‑phosphate synthase subunit beta
RA	1,871,944	C→T	9.9%	Q63* (CAG→TAG) ‡	cobQ →	adenosyl‑cobyric acid synthase
RA	1,871,945	A→G	10.1%	Q63R (CAG→CGG) ‡	cobQ →	adenosyl‑cobyric acid synthase
RA	1,872,278	T→A	5.4%	L174Q (CTG→CAG)	cobQ →	adenosyl‑cobyric acid synthase
RA	1,886,630	A→G	5.8%	I419V (ATC→GTC)	rmuC →	DNA recombination limiting inversions protein
RA	1,886,637	A→T	6.5%	D421V (GAC→GTC)	rmuC →	DNA recombination limiting inversions protein
RA	1,886,644	C→T	6.6%	D423D (GAC→GAT)	rmuC →	DNA recombination limiting inversions protein
RA	1,888,482	T→A	7.5%	E611D (GAA→GAT)	PP_1695 ←	sodium‑solute symporter/two‑component system sensor histidine kinase/response regulator
RA	1,888,487	T→A	7.7%	I610F (ATC→TTC)	PP_1695 ←	sodium‑solute symporter/two‑component system sensor histidine kinase/response regulator
RA	1,897,245	G→T	8.1%	intergenic (‑56/+88)	PP_mr24 ← / ← rdgC	mini‑ykkC regulatory region/recombination‑associated protein RdgC
RA	1,897,249	T→A	8.1%	intergenic (‑60/+84)	PP_mr24 ← / ← rdgC	mini‑ykkC regulatory region/recombination‑associated protein RdgC
RA	1,897,253	A→C	7.0%	intergenic (‑64/+80)	PP_mr24 ← / ← rdgC	mini‑ykkC regulatory region/recombination‑associated protein RdgC
RA	1,899,025	T→C	7.7%	intergenic (+53/‑467)	PP_t18 → / → PP_1703	tRNA‑Asp/assimilatory nitrate reductase/sulfite reductase
RA	1,899,028	G→A	7.1%	intergenic (+56/‑464)	PP_t18 → / → PP_1703	tRNA‑Asp/assimilatory nitrate reductase/sulfite reductase
RA	1,899,320	A→G	11.0%	intergenic (+348/‑172)	PP_t18 → / → PP_1703	tRNA‑Asp/assimilatory nitrate reductase/sulfite reductase
RA	1,899,331	A→G	5.4%	intergenic (+359/‑161)	PP_t18 → / → PP_1703	tRNA‑Asp/assimilatory nitrate reductase/sulfite reductase
RA	1,899,332	G→A	5.5%	intergenic (+360/‑160)	PP_t18 → / → PP_1703	tRNA‑Asp/assimilatory nitrate reductase/sulfite reductase
RA	1,899,849	A→T	10.6%	K120* (AAG→TAG) ‡	PP_1703 →	assimilatory nitrate reductase/sulfite reductase
RA	1,899,850	A→T	10.6%	K120M (AAG→ATG) ‡	PP_1703 →	assimilatory nitrate reductase/sulfite reductase
RA	1,909,160	G→A	5.6%	Q45* (CAG→TAG)	PP_1709 ←	fumarylacetoacetate hydrolase family protein
RA	1,909,167	C→G	5.7%	A42A (GCG→GCC)	PP_1709 ←	fumarylacetoacetate hydrolase family protein
RA	1,909,174	T→C	5.5%	Y40C (TAC→TGC)	PP_1709 ←	fumarylacetoacetate hydrolase family protein
RA	1,915,640:1	+A	8.2%	intergenic (+26/‑263)	fklB‑II → / → PP_1715	FKBP‑type peptidyl‑prolyl cis‑trans isomerase/hypothetical protein
RA	1,915,644	T→A	7.7%	intergenic (+30/‑259)	fklB‑II → / → PP_1715	FKBP‑type peptidyl‑prolyl cis‑trans isomerase/hypothetical protein
RA	1,915,647	Δ1 bp	7.7%	intergenic (+33/‑256)	fklB‑II → / → PP_1715	FKBP‑type peptidyl‑prolyl cis‑trans isomerase/hypothetical protein
RA	1,915,868	A→T	5.3%	intergenic (+254/‑35)	fklB‑II → / → PP_1715	FKBP‑type peptidyl‑prolyl cis‑trans isomerase/hypothetical protein
RA	1,915,870	A→T	5.4%	intergenic (+256/‑33)	fklB‑II → / → PP_1715	FKBP‑type peptidyl‑prolyl cis‑trans isomerase/hypothetical protein
RA	1,915,872	A→T	5.4%	intergenic (+258/‑31)	fklB‑II → / → PP_1715	FKBP‑type peptidyl‑prolyl cis‑trans isomerase/hypothetical protein
RA	1,921,591	T→A	12.0%	intergenic (+24/+37)	PP_1720 → / ← PP_1721	alcohol dehydrogenase/phosphoserine phosphatase
RA	1,921,592	T→A	12.0%	intergenic (+25/+36)	PP_1720 → / ← PP_1721	alcohol dehydrogenase/phosphoserine phosphatase
RA	1,926,555	T→G	7.1%	D118A (GAC→GCC) ‡	PP_1726 ←	ABC transporter substrate‑binding protein
RA	1,926,556	C→A	7.3%	D118Y (GAC→TAC) ‡	PP_1726 ←	ABC transporter substrate‑binding protein
RA	1,932,615	T→A	6.0%	intergenic (‑40/+111)	rluA ← / ← minE	bifunctional tRNA pseudouridine(32) synthase TrmQ/ribosomal large subunit pseudouridine synthase RluA/cell division topological specificity factor
RA	1,932,616	T→A	6.0%	intergenic (‑41/+110)	rluA ← / ← minE	bifunctional tRNA pseudouridine(32) synthase TrmQ/ribosomal large subunit pseudouridine synthase RluA/cell division topological specificity factor
RA	1,932,617	T→A	5.9%	intergenic (‑42/+109)	rluA ← / ← minE	bifunctional tRNA pseudouridine(32) synthase TrmQ/ribosomal large subunit pseudouridine synthase RluA/cell division topological specificity factor
RA	1,948,216	C→G	5.6%	R494R (CGG→CGC)	PP_1749 ←	acetyltransferase
RA	1,955,252	T→A	12.2%	intergenic (+39/‑154)	PP_1752 → / → PP_1753	hypothetical protein/DMT superfamily permease
RA	1,955,253	T→A	12.2%	intergenic (+40/‑153)	PP_1752 → / → PP_1753	hypothetical protein/DMT superfamily permease
RA	1,960,142	T→A	6.1%	intergenic (+50/‑78)	bolA → / → PP_1758	DNA‑binding transcriptional dual regulator/rhodanese‑like domain‑containing sulfurtransferase
RA	1,967,187	C→T	6.3%	intergenic (+14/+105)	PP_1762 → / ← yciK	hypothetical protein/putative oxidoreductase
RA	1,967,284	A→G	8.0%	intergenic (+111/+8)	PP_1762 → / ← yciK	hypothetical protein/putative oxidoreductase
RA	1,968,711	G→C	6.9%	R51G (CGC→GGC)	gph ←	phosphoglycolate phosphatase
RA	1,968,712	G→C	6.8%	A50A (GCC→GCG)	gph ←	phosphoglycolate phosphatase
RA	1,977,279	C→G	5.7%	R300R (CGC→CGG)	PP_1770 →	3‑phosphoshikimate 1‑carboxyvinyltransferase
RA	1,978,751	C→G	6.5%	F45L (TTC→TTG)	cmk →	cytidylate kinase
RA	1,981,135	T→G	15.7%	intergenic (+31/‑269)	rpsA → / → ihfB	30S ribosomal protein S1/integration host factor subunit beta
RA	1,981,136	C→A	17.3%	intergenic (+32/‑268)	rpsA → / → ihfB	30S ribosomal protein S1/integration host factor subunit beta
RA	1,993,644:1	+T	5.9%	intergenic (+39/+59)	PP_1780 → / ← PP_1781	mannosyltransferase/acyltransferase
RA	1,993,647	Δ1 bp	5.8%	intergenic (+42/+56)	PP_1780 → / ← PP_1781	mannosyltransferase/acyltransferase
RA	2,004,613	G→A	11.3%	intergenic (+60/+90)	PP_1787 → / ← PP_1788	hypothetical protein/hypothetical protein
RA	2,004,616	T→C	11.2%	intergenic (+63/+87)	PP_1787 → / ← PP_1788	hypothetical protein/hypothetical protein
RA	2,007,281	G→A	7.4%	L42L (CTG→TTG)	PP_1790 ←	acylneuraminate cytidylyltransferase
RA	2,007,282	T→C	6.5%	Q41Q (CAA→CAG)	PP_1790 ←	acylneuraminate cytidylyltransferase
RA	2,019,126	C→A	7.4%	L120M (CTG→ATG) ‡	PP_1797 →	HlyD family secretion protein
RA	2,019,127	T→G	7.6%	L120R (CTG→CGG) ‡	PP_1797 →	HlyD family secretion protein
RA	2,031,413	T→G	11.1%	intergenic (+43/+32)	PP_1806 → / ← kdsA‑II	arabinose 5‑phosphate isomerase/2‑dehydro‑3‑deoxyphosphooctonate aldolase
RA	2,031,415	T→A	11.5%	intergenic (+45/+30)	PP_1806 → / ← kdsA‑II	arabinose 5‑phosphate isomerase/2‑dehydro‑3‑deoxyphosphooctonate aldolase
RA	2,031,417	C→A	11.5%	intergenic (+47/+28)	PP_1806 → / ← kdsA‑II	arabinose 5‑phosphate isomerase/2‑dehydro‑3‑deoxyphosphooctonate aldolase
RA	2,033,417	C→G	7.6%	I285M (ATC→ATG)	pgi‑I →	glucose 6‑phosphate isomerase
RA	2,039,746	A→C	10.1%	P33P (CCT→CCG) ‡	PP_1812 ←	hypothetical protein
RA	2,039,747	G→T	10.2%	P33H (CCT→CAT) ‡	PP_1812 ←	hypothetical protein
RA	2,051,108	T→A	7.7%	intergenic (‑63/+23)	PP_1825 ← / ← PP_1826	hypothetical protein/isochorismatase family hydrolase
RA	2,054,167	C→A	5.5%	G168C (GGC→TGC)	PP_1829 ←	alpha/beta family hydrolase
RA	2,063,244	G→A	6.6%	intergenic (+58/‑149)	PP_1838 → / → PP_1839	membrane protein/hypothetical protein
RA	2,063,248	T→C	6.7%	intergenic (+62/‑145)	PP_1838 → / → PP_1839	membrane protein/hypothetical protein
RA	2,063,251	G→A	7.4%	intergenic (+65/‑142)	PP_1838 → / → PP_1839	membrane protein/hypothetical protein
RA	2,063,255	T→C	6.5%	intergenic (+69/‑138)	PP_1838 → / → PP_1839	membrane protein/hypothetical protein
RA	2,067,292	C→G	7.7%	V9L (GTG→CTG)	PP_1843 ←	Mg(2+)/Co(2+) transporter
RA	2,074,070	T→C	6.5%	intergenic (‑39/+164)	PP_1849 ← / ← ygaY	hypothetical protein/transporter YgaY
RA	2,074,072	C→G	7.0%	intergenic (‑41/+162)	PP_1849 ← / ← ygaY	hypothetical protein/transporter YgaY
RA	2,074,074	G→A	6.2%	intergenic (‑43/+160)	PP_1849 ← / ← ygaY	hypothetical protein/transporter YgaY
RA	2,077,807	C→T	5.8%	A163V (GCG→GTG)	PP_1853 →	LysR family transcriptional regulator
RA	2,077,810	A→G	5.8%	H164R (CAC→CGC)	PP_1853 →	LysR family transcriptional regulator
RA	2,080,393	G→C	5.1%	A340A (GCG→GCC)	earP →	EF‑P arginine 32 rhamnosyl‑transferase
RA	2,081,157	A→G	6.4%	intergenic (+32/+83)	efp → / ← ohr	elongation factor P/organic hydroperoxide resistance protein
RA	2,083,532	C→T	5.9%	A48V (GCG→GTG)	PP_1862 →	membrane protein
RA	2,085,498	G→C	5.4%	intergenic (+164/‑431)	PP_1864 → / → PP_1865	hypothetical protein/transposase
RA	2,085,499	G→C	5.4%	intergenic (+165/‑430)	PP_1864 → / → PP_1865	hypothetical protein/transposase
RA	2,087,366	Δ1 bp	6.9%	intergenic (+136/+782)	PP_1865 → / ← aroH	transposase/3‑deoxy‑7‑phosphoheptulonate synthase
RA	2,087,376	C→G	13.4%	intergenic (+146/+772)	PP_1865 → / ← aroH	transposase/3‑deoxy‑7‑phosphoheptulonate synthase
RA	2,087,377	C→G	13.6%	intergenic (+147/+771)	PP_1865 → / ← aroH	transposase/3‑deoxy‑7‑phosphoheptulonate synthase
RA	2,087,386:1	+G	7.8%	intergenic (+156/+762)	PP_1865 → / ← aroH	transposase/3‑deoxy‑7‑phosphoheptulonate synthase
RA	2,092,469	T→A	10.2%	intergenic (+72/+19)	deaD → / ← ygiD	ATP‑dependent DEAD‑box RNA helicase DeaD/4,5‑DOPA‑dioxygenase
RA	2,092,470	T→A	10.3%	intergenic (+73/+18)	deaD → / ← ygiD	ATP‑dependent DEAD‑box RNA helicase DeaD/4,5‑DOPA‑dioxygenase
RA	2,092,481	A→G	5.1%	intergenic (+84/+7)	deaD → / ← ygiD	ATP‑dependent DEAD‑box RNA helicase DeaD/4,5‑DOPA‑dioxygenase
RA	2,095,232	G→C	11.2%	intergenic (‑240/+77)	htpX ← / ← alaA	protease HtpX/glutamate‑pyruvate aminotransferase
RA	2,095,235	G→C	10.6%	intergenic (‑243/+74)	htpX ← / ← alaA	protease HtpX/glutamate‑pyruvate aminotransferase
RA	2,097,506	G→C	6.9%	S137T (AGT→ACT)	gpx →	hydroperoxy fatty acid reductase Gpx1
RA	2,097,512	A→G	7.7%	Q139R (CAG→CGG)	gpx →	hydroperoxy fatty acid reductase Gpx1
RA	2,100,001	T→G	5.7%	intergenic (‑69/‑136)	PP_1875 ← / → PP_1876	two‑component system sensor histidine kinase/response regulator/AAA family ATP/GTP‑binding protein
RA	2,100,002	G→C	6.2%	intergenic (‑70/‑135)	PP_1875 ← / → PP_1876	two‑component system sensor histidine kinase/response regulator/AAA family ATP/GTP‑binding protein
RA	2,102,795	C→G	5.5%	noncoding (35/76 nt)	PP_t21 →	tRNA‑Gly
RA	2,103,042	C→G	9.2%	noncoding (35/76 nt)	PP_t23 →	tRNA‑Gly
RA	2,106,716	G→T	5.1%	A148A (GCC→GCA)	PP_1880 ←	outer membrane autotransporter
RA	2,106,719	A→C	5.1%	S147S (TCT→TCG)	PP_1880 ←	outer membrane autotransporter
RA	2,107,390	G→A	5.9%	A661A (GCC→GCT)	PP_1881 ←	hypothetical protein
RA	2,107,394	A→T	5.7%	V660D (GTC→GAC)	PP_1881 ←	hypothetical protein
RA	2,113,719	G→T	5.6%	Q204K (CAG→AAG)	PP_1882 ←	membrane protein
RA	2,134,314	A→C	5.1%	intergenic (‑37/+32)	PP_1892 ← / ← fadE	hypothetical protein/medium‑long chain acyl‑CoA dehydrogenase
RA	2,134,321	G→T	6.5%	intergenic (‑44/+25)	PP_1892 ← / ← fadE	hypothetical protein/medium‑long chain acyl‑CoA dehydrogenase
RA	2,139,665	T→G	7.5%	Q167H (CAA→CAC)	PP_5481 ←	hypothetical protein
RA	2,139,671	A→T	8.0%	R165R (CGT→CGA)	PP_5481 ←	hypothetical protein
RA	2,139,674	A→T	8.0%	R164R (CGT→CGA)	PP_5481 ←	hypothetical protein
RA	2,139,680	C→A	7.1%	Q162H (CAG→CAT)	PP_5481 ←	hypothetical protein
RA	2,141,427	T→A	8.9%	L374M (TTG→ATG) ‡	PP_1897 →	DNA internalization‑related competence protein ComEC/Rec2
RA	2,141,428	T→A	8.6%	L374* (TTG→TAG) ‡	PP_1897 →	DNA internalization‑related competence protein ComEC/Rec2
RA	2,147,347	A→T	7.7%	A1072A (GCT→GCA)	rne ←	ribonuclease E
RA	2,147,927	G→T	6.5%	A879D (GCC→GAC)	rne ←	ribonuclease E
RA	2,147,930	A→C	6.6%	V878G (GTC→GGC)	rne ←	ribonuclease E
RA	2,165,021	A→G	6.1%	V187A (GTA→GCA) ‡	PP_1920 ←	hypothetical protein
RA	2,165,022	C→T	6.1%	V187I (GTA→ATA) ‡	PP_1920 ←	hypothetical protein
RA	2,166,687	T→A	6.4%	intergenic (‑488/‑293)	PP_5483 ← / → PP_1921	hypothetical protein/hypothetical protein
RA	2,169,427	A→C	5.4%	F85V (TTT→GTT)	PP_1922 ←	hypothetical protein
RA	2,171,694	T→C	5.2%	intergenic (+186/+217)	PP_5484 → / ← PP_1924	hypothetical protein/phosphinothricin N‑acetyltransferase
RA	2,200,006:1	+C	10.4%	coding (829/1278 nt)	PP_1944 →	aminomethyltransferase
RA	2,200,011	Δ1 bp	11.3%	coding (834/1278 nt)	PP_1944 →	aminomethyltransferase
RA	2,227,465	T→A	10.1%	intergenic (‑21/‑426)	PP_1964 ← / → holB	dGMP/dTMP/dhydroxyCMP kinase/DNA polymerase III subunit delta'
RA	2,236,224	A→T	7.8%	D431V (GAC→GTC)	uvrB →	uvrABC excinuclease protein B
RA	2,237,721	Δ1 bp	5.2%	coding (906/1551 nt)	PP_1975 ←	EmrB/QacA family drug resistance transporter
RA	2,237,723:1	+G	5.1%	coding (904/1551 nt)	PP_1975 ←	EmrB/QacA family drug resistance transporter
RA	2,238,685	A→T	5.1%	I365I (ATT→ATA)	PP_1976 ←	HlyD family secretion protein
RA	2,238,688	A→T	5.2%	R364R (CGT→CGA)	PP_1976 ←	HlyD family secretion protein
RA	2,241,611	G→C	9.6%	noncoding (35/76 nt)	PP_t25 →	tRNA‑Ala
RA	2,242,141	G→C	6.0%	noncoding (35/76 nt)	PP_t29 →	tRNA‑Ala
RA	2,252,856	T→A	11.8%	intergenic (+69/‑50)	leuD → / → PP_1987	3‑isopropylmalate dehydratase small subunit/UbiE/COQ5 family methlytransferase
RA	2,252,857	T→A	11.8%	intergenic (+70/‑49)	leuD → / → PP_1987	3‑isopropylmalate dehydratase small subunit/UbiE/COQ5 family methlytransferase
RA	2,265,711	A→C	5.8%	E243A (GAG→GCG)	folC →	bifunctional folypolyglutamate synthase/dihydrofolate synthase
RA	2,265,714	T→A	5.5%	L244Q (CTG→CAG)	folC →	bifunctional folypolyglutamate synthase/dihydrofolate synthase
RA	2,265,717	G→T	6.1%	R245L (CGC→CTC)	folC →	bifunctional folypolyglutamate synthase/dihydrofolate synthase
RA	2,273,095	A→G	9.7%	intergenic (+17/+274)	PP_2003 → / ← PP_2004	hypothetical protein/AraC family transcriptional regulator
RA	2,273,105	C→G	17.7%	intergenic (+27/+264)	PP_2003 → / ← PP_2004	hypothetical protein/AraC family transcriptional regulator
RA	2,273,109	A→T	18.1%	intergenic (+31/+260)	PP_2003 → / ← PP_2004	hypothetical protein/AraC family transcriptional regulator
RA	2,273,113	C→G	17.8%	intergenic (+35/+256)	PP_2003 → / ← PP_2004	hypothetical protein/AraC family transcriptional regulator
RA	2,273,123	C→T	9.8%	intergenic (+45/+246)	PP_2003 → / ← PP_2004	hypothetical protein/AraC family transcriptional regulator
RA	2,273,702	C→G	7.8%	R236R (CGG→CGC)	PP_2004 ←	AraC family transcriptional regulator
RA	2,273,705	C→G	7.7%	T235T (ACG→ACC)	PP_2004 ←	AraC family transcriptional regulator
RA	2,277,418	G→T	5.4%	A402D (GCC→GAC)	PP_2007 ←	P‑47‑like protein
RA	2,281,073	T→A	6.5%	intergenic (+88/‑149)	fadH → / → PP_2009	2,4‑dienoyl‑CoA reductase/1‑aminocyclopropane‑1‑carboxylate deaminase
RA	2,282,773	T→C	5.1%	intergenic (‑122/+107)	PP_2010 ← / ← PP_2011	cytochrome b561/hypothetical protein
RA	2,282,780	T→G	10.0%	intergenic (‑129/+100)	PP_2010 ← / ← PP_2011	cytochrome b561/hypothetical protein
RA	2,282,813	T→G	35.7%	intergenic (‑162/+67)	PP_2010 ← / ← PP_2011	cytochrome b561/hypothetical protein
RA	2,282,817	G→C	34.2%	intergenic (‑166/+63)	PP_2010 ← / ← PP_2011	cytochrome b561/hypothetical protein
RA	2,282,818	G→C	34.1%	intergenic (‑167/+62)	PP_2010 ← / ← PP_2011	cytochrome b561/hypothetical protein
RA	2,282,822	C→A	31.3%	intergenic (‑171/+58)	PP_2010 ← / ← PP_2011	cytochrome b561/hypothetical protein
RA	2,282,855	C→A	11.1%	intergenic (‑204/+25)	PP_2010 ← / ← PP_2011	cytochrome b561/hypothetical protein
RA	2,282,862	G→A	7.4%	intergenic (‑211/+18)	PP_2010 ← / ← PP_2011	cytochrome b561/hypothetical protein
RA	2,283,014	A→T	5.1%	W282R (TGG→AGG)	PP_2011 ←	hypothetical protein
RA	2,294,064	T→A	7.1%	L6M (TTG→ATG)	PP_2020 →	lipoprotein
RA	2,295,903	C→A	7.2%	intergenic (+106/+27)	PP_5496 → / ← PP_2023	hypothetical protein/glutathione S‑transferase family protein
RA	2,305,982	G→A	8.8%	A206A (GCC→GCT)	PP_2028 ←	TPR repeat‑containing protein
RA	2,305,986	G→C	5.6%	A205G (GCC→GGC)	PP_2028 ←	TPR repeat‑containing protein
RA	2,305,990	T→C	5.5%	S204G (AGC→GGC)	PP_2028 ←	TPR repeat‑containing protein
RA	2,307,312	T→C	6.7%	K121E (AAG→GAG)	PP_2029 ←	von Willebrand factor type A domain‑containing protein
RA	2,307,317	A→T	6.6%	L119Q (CTG→CAG)	PP_2029 ←	von Willebrand factor type A domain‑containing protein
RA	2,307,322	G→A	5.8%	L117L (CTC→CTT)	PP_2029 ←	von Willebrand factor type A domain‑containing protein
RA	2,309,142	A→G	5.2%	V308A (GTG→GCG)	PP_2032 ←	ATPase
RA	2,311,091	G→A	7.4%	V267I (GTA→ATA) ‡	PP_2033 →	hypothetical protein
RA	2,311,092	T→C	7.2%	V267A (GTA→GCA) ‡	PP_2033 →	hypothetical protein
RA	2,313,084	G→C	5.4%	A349A (GCC→GCG)	benE‑I ←	benzoate transport protein
RA	2,313,087	G→C	5.4%	S348R (AGC→AGG)	benE‑I ←	benzoate transport protein
RA	2,318,705	C→T	5.3%	R302C (CGC→TGC)	PP_2039 →	acyl‑CoA dehydrogenase
RA	2,320,842	T→G	9.5%	N148H (AAC→CAC)	PP_2041 ←	LysR family transcriptional regulator
RA	2,320,844	G→T	9.5%	P147H (CCC→CAC)	PP_2041 ←	LysR family transcriptional regulator
RA	2,320,847	A→C	11.9%	V146G (GTG→GGG)	PP_2041 ←	LysR family transcriptional regulator
RA	2,320,849	C→A	9.1%	V145V (GTG→GTT)	PP_2041 ←	LysR family transcriptional regulator
RA	2,347,661	G→C	5.5%	V307L (GTG→CTG) ‡	PP_2064 →	multidrug RND transporter membrane fusion protein
RA	2,347,663	G→C	5.6%	V307V (GTG→GTC) ‡	PP_2064 →	multidrug RND transporter membrane fusion protein
RA	2,347,665	G→C	5.4%	S308T (AGC→ACC)	PP_2064 →	multidrug RND transporter membrane fusion protein
RA	2,351,632	A→C	9.5%	L36R (CTG→CGG) ‡	PP_2066 ←	GntR family transcriptional regulator
RA	2,351,633	G→T	8.5%	L36M (CTG→ATG) ‡	PP_2066 ←	GntR family transcriptional regulator
RA	2,351,640	C→G	10.6%	V33V (GTG→GTC)	PP_2066 ←	GntR family transcriptional regulator
RA	2,356,468	G→T	5.3%	L133M (CTG→ATG)	PP_2070 ←	AraC family transcriptional regulator
RA	2,356,554	C→A	5.1%	G104V (GGC→GTC)	PP_2070 ←	AraC family transcriptional regulator
RA	2,356,557	T→G	5.6%	D103A (GAC→GCC)	PP_2070 ←	AraC family transcriptional regulator
RA	2,367,453	A→C	6.9%	Q76H (CAA→CAC)	gdhB →	NAD‑specific glutamate dehydrogenase
RA	2,367,454	G→T	6.7%	V77L (GTG→TTG)	gdhB →	NAD‑specific glutamate dehydrogenase
RA	2,372,124	Δ1 bp	5.9%	intergenic (+33/+79)	gdhB → / ← PP_2081	NAD‑specific glutamate dehydrogenase/phosphoenolpyruvate synthase regulatory protein
RA	2,372,126	G→C	6.2%	intergenic (+35/+77)	gdhB → / ← PP_2081	NAD‑specific glutamate dehydrogenase/phosphoenolpyruvate synthase regulatory protein
RA	2,372,127:1	+C	5.9%	intergenic (+36/+76)	gdhB → / ← PP_2081	NAD‑specific glutamate dehydrogenase/phosphoenolpyruvate synthase regulatory protein
RA	2,376,751	T→C	9.6%	intergenic (+69/‑136)	PP_2083 → / → PP_2084	lipase/ribonuclease activity regulator
RA	2,376,752	G→A	9.5%	intergenic (+70/‑135)	PP_2083 → / → PP_2084	lipase/ribonuclease activity regulator
RA	2,380,790	T→C	10.0%	A137A (GCT→GCC)	oprF →	porin F
RA	2,380,791	G→A	10.0%	G138S (GGC→AGC)	oprF →	porin F
RA	2,381,445	T→G	6.5%	intergenic (+31/+56)	oprF → / ← cobA	porin F/uroporphyrinogen‑III C‑methyltransferase
RA	2,381,446	C→A	5.4%	intergenic (+32/+55)	oprF → / ← cobA	porin F/uroporphyrinogen‑III C‑methyltransferase
RA	2,385,836	Δ1 bp	5.8%	coding (85/576 nt)	PP_2093 ←	two‑component system response regulator NasT
RA	2,385,840:1	+A	5.7%	coding (81/576 nt)	PP_2093 ←	two‑component system response regulator NasT
RA	2,386,430	G→T	5.2%	A239A (GCC→GCA)	PP_2094 ←	nitrate‑binding protein NasS
RA	2,386,552	C→T	5.1%	A199T (GCC→ACC)	PP_2094 ←	nitrate‑binding protein NasS
RA	2,388,295	A→T	7.2%	M338L (ATG→TTG)	pyrD →	dihydroorotate dehydrogenase
RA	2,388,379	C→G	7.5%	intergenic (+73/+71)	pyrD → / ← rmf	dihydroorotate dehydrogenase/ribosome modulation factor
RA	2,390,910	T→C	5.6%	R576R (CGT→CGC)	rlmKL →	23S rRNA (guanine(2445)‑N(2))/(guanine(2069)‑N(7))‑ methyltransferase
RA	2,390,913	G→A	5.7%	M577I (ATG→ATA)	rlmKL →	23S rRNA (guanine(2445)‑N(2))/(guanine(2069)‑N(7))‑ methyltransferase
RA	2,392,660	C→G	7.0%	I382M (ATC→ATG)	PP_2097 →	sensory box protein
RA	2,395,068	T→A	5.9%	N123I (AAT→ATT)	dacB ←	D‑alanyl‑D‑alanine carboxypeptidase
RA	2,395,074	C→T	5.3%	R121H (CGC→CAC)	dacB ←	D‑alanyl‑D‑alanine carboxypeptidase
RA	2,402,351	A→T	5.2%	L20Q (CTG→CAG)	PP_2103 ←	hypothetical protein
RA	2,402,354	A→T	8.1%	L19Q (CTG→CAG)	PP_2103 ←	hypothetical protein
RA	2,402,360	Δ1 bp	5.7%	coding (50/330 nt)	PP_2103 ←	hypothetical protein
RA	2,403,353	T→A	8.1%	intergenic (‑249/‑64)	PP_2105 ← / → PP_2106	hypothetical protein/ammonium transporter
RA	2,408,400	Δ1 bp	5.1%	coding (208/1566 nt)	PP_2111 ←	aerotaxis receptor
RA	2,408,406:1	+T	6.2%	coding (202/1566 nt)	PP_2111 ←	aerotaxis receptor
RA	2,409,994	G→C	6.4%	F499L (TTC→TTG)	acnA‑I ←	aconitate hydratase
RA	2,410,898	T→A	8.5%	D198V (GAC→GTC)	acnA‑I ←	aconitate hydratase
RA	2,410,904	T→G	6.7%	E196A (GAG→GCG)	acnA‑I ←	aconitate hydratase
RA	2,416,597	A→T	6.8%	intergenic (+87/+28)	pdxB → / ← PP_2118	erythronate‑4‑phosphate dehydrogenase/hypothetical protein
RA	2,416,598	A→T	6.8%	intergenic (+88/+27)	pdxB → / ← PP_2118	erythronate‑4‑phosphate dehydrogenase/hypothetical protein
RA	2,420,641	Δ1 bp	24.0%	intergenic (+81/+26)	ctpH → / ← PP_t62	methyl‑accepting chemotaxis protein CtpH/tRNA‑Pro
RA	2,420,645:1	+T	23.7%	intergenic (+85/+22)	ctpH → / ← PP_t62	methyl‑accepting chemotaxis protein CtpH/tRNA‑Pro
RA	2,442,711	G→T	6.9%	P602P (CCG→CCT)	topA →	DNA topoisomerase I
RA	2,442,716	A→C	7.3%	K604T (AAG→ACG)	topA →	DNA topoisomerase I
RA	2,443,543	T→A	5.9%	F6I (TTT→ATT) ‡	PP_2140 →	hypothetical protein
RA	2,443,544	T→A	5.9%	F6Y (TTT→TAT) ‡	PP_2140 →	hypothetical protein
RA	2,443,545	T→A	5.9%	F6L (TTT→TTA) ‡	PP_2140 →	hypothetical protein
RA	2,444,458	A→C	5.1%	*159G (TGA→GGA)	sulA ←	cell division inhibitor SulA
RA	2,444,462	G→T	5.1%	L157L (CTC→CTA) ‡	sulA ←	cell division inhibitor SulA
RA	2,444,463	A→C	5.2%	L157R (CTC→CGC) ‡	sulA ←	cell division inhibitor SulA
RA	2,444,467	G→T	5.8%	R156S (CGC→AGC)	sulA ←	cell division inhibitor SulA
RA	2,447,094	Δ1 bp	5.3%	coding (440/1011 nt)	nagZ →	beta‑N‑acetylglucosaminidase
RA	2,447,098:1	+A	5.5%	coding (444/1011 nt)	nagZ →	beta‑N‑acetylglucosaminidase
RA	2,456,930	T→A	5.1%	intergenic (+138/‑43)	gapB → / → PP_2150	glyceraldehyde‑3‑phosphate dehydrogenase/thiamine biosynthesis lipoprotein
RA	2,456,931	T→A	5.1%	intergenic (+139/‑42)	gapB → / → PP_2150	glyceraldehyde‑3‑phosphate dehydrogenase/thiamine biosynthesis lipoprotein
RA	2,457,380	A→G	5.8%	A136A (GCA→GCG)	PP_2150 →	thiamine biosynthesis lipoprotein
RA	2,459,121	A→G	6.3%	S316G (AGC→GGC)	sthA →	pyridine nucleotide transhydrogenase
RA	2,459,124	C→T	6.4%	L317L (CTG→TTG)	sthA →	pyridine nucleotide transhydrogenase
RA	2,461,778	A→T	10.7%	Q245L (CAG→CTG)	lolC →	lipoprotein releasing system transmembrane protein LolC
RA	2,462,973	T→A	5.9%	L229Q (CTG→CAG)	lolD →	lipoprotein‑releasing system ATP‑binding protein LolD
RA	2,467,998	T→A	6.2%	intergenic (+14/+18)	queF → / ← PP_2161	NADPH‑dependent 7‑cyano‑7‑deazaguanine reductase/hypothetical protein
RA	2,467,999	T→A	6.6%	intergenic (+15/+17)	queF → / ← PP_2161	NADPH‑dependent 7‑cyano‑7‑deazaguanine reductase/hypothetical protein
RA	2,468,000	T→A	6.5%	intergenic (+16/+16)	queF → / ← PP_2161	NADPH‑dependent 7‑cyano‑7‑deazaguanine reductase/hypothetical protein
RA	2,468,304	G→C	5.8%	intergenic (‑25/+98)	PP_2161 ← / ← PP_2162	hypothetical protein/phosphonoacetaldehyde phosphonohydrolase‑like protein
RA	2,483,440	G→A	5.2%	R88H (CGC→CAC)	puuA‑I →	glutamate‑putrescine ligase
RA	2,483,443	T→A	5.2%	L89Q (CTG→CAG)	puuA‑I →	glutamate‑putrescine ligase
RA	2,492,062	T→A	5.7%	L481Q (CTG→CAG)	PP_2185 →	formate dehydrogenase subunit alpha
RA	2,492,065	T→A	5.8%	L482Q (CTG→CAG)	PP_2185 →	formate dehydrogenase subunit alpha
RA	2,498,030	T→A	7.6%	intergenic (+88/‑113)	PP_2192 → / → PP_2193	ECF family RNA polymerase sigma‑70 factor/transmembrane sensor protein/ferric siderophore receptor
RA	2,498,031	T→A	6.3%	intergenic (+89/‑112)	PP_2192 → / → PP_2193	ECF family RNA polymerase sigma‑70 factor/transmembrane sensor protein/ferric siderophore receptor
RA	2,503,034	A→G	5.3%	T96A (ACG→GCG) ‡	speB →	agmatinase
RA	2,503,035	C→T	5.3%	T96M (ACG→ATG) ‡	speB →	agmatinase
RA	2,503,041	A→T	5.3%	Q98L (CAG→CTG)	speB →	agmatinase
RA	2,508,074	T→A	6.2%	Q48L (CAG→CTG)	PP_2201 ←	alpha/beta family hydrolase
RA	2,509,938	T→A	5.8%	Q40L (CAG→CTG)	copB‑I ←	copper resistance protein B
RA	2,509,944	C→G	5.6%	G38A (GGC→GCC)	copB‑I ←	copper resistance protein B
RA	2,509,950	T→A	6.3%	Q36L (CAG→CTG)	copB‑I ←	copper resistance protein B
RA	2,510,285	Δ1 bp	6.8%	coding (1489/1725 nt)	copA‑I ←	copper resistance protein A
RA	2,510,290	A→G	6.0%	V495A (GTG→GCG) ‡	copA‑I ←	copper resistance protein A
RA	2,510,291	C→T	7.0%	V495M (GTG→ATG) ‡	copA‑I ←	copper resistance protein A
RA	2,510,295:1	+A	7.2%	coding (1479/1725 nt)	copA‑I ←	copper resistance protein A
RA	2,514,934	G→C	9.4%	P166A (CCG→GCG)	phnX ←	phosphonoacetaldehyde hydrolase
RA	2,523,091:1	+C	8.5%	coding (4299/4446 nt)	PP_2212 →	leucine‑rich repeat‑containing protein
RA	2,523,097	Δ1 bp	8.6%	coding (4305/4446 nt)	PP_2212 →	leucine‑rich repeat‑containing protein
RA	2,529,061:1	+C	7.5%	intergenic (+145/‑262)	PP_2217 → / → PP_2218	enoyl‑CoA hydratase/transposase
RA	2,529,071	G→C	11.1%	intergenic (+155/‑252)	PP_2217 → / → PP_2218	enoyl‑CoA hydratase/transposase
RA	2,529,072	G→C	11.2%	intergenic (+156/‑251)	PP_2217 → / → PP_2218	enoyl‑CoA hydratase/transposase
RA	2,529,082	Δ1 bp	6.8%	intergenic (+166/‑241)	PP_2217 → / → PP_2218	enoyl‑CoA hydratase/transposase
RA	2,530,912	C→G	18.5%	N36K (AAC→AAG)	PP_2219 →	hypothetical protein
RA	2,530,913	G→A	20.3%	G37S (GGC→AGC) ‡	PP_2219 →	hypothetical protein
RA	2,530,914	G→T	20.4%	G37V (GGC→GTC) ‡	PP_2219 →	hypothetical protein
RA	2,546,866	T→C	9.2%	intergenic (+22/+18)	PP_2238 → / ← PP_5504	metallopeptidase/hypothetical protein
RA	2,546,869	G→A	8.2%	intergenic (+25/+15)	PP_2238 → / ← PP_5504	metallopeptidase/hypothetical protein
RA	2,560,505	T→A	5.1%	W142R (TGG→AGG)	PP_2243 →	hypothetical protein
RA	2,565,105	C→A	7.0%	Q630H (CAG→CAT) ‡	pctB ←	methyl‑accepting chemotaxis protein PctB
RA	2,565,106	T→G	6.2%	Q630P (CAG→CCG) ‡	pctB ←	methyl‑accepting chemotaxis protein PctB
RA	2,568,736	T→A	5.5%	Q285H (CAA→CAT)	PP_2252 ←	hypothetical protein
RA	2,568,739	T→G	5.4%	E284D (GAA→GAC)	PP_2252 ←	hypothetical protein
RA	2,568,744	C→A	5.2%	V283F (GTC→TTC)	PP_2252 ←	hypothetical protein
RA	2,568,747	T→A	5.1%	M282L (ATG→TTG)	PP_2252 ←	hypothetical protein
RA	2,571,149	G→A	7.1%	intergenic (‑24/+20)	PP_2254 ← / ← dctA‑III	GntR family transcriptional regulator/C4‑dicarboxylate transport protein
RA	2,573,594	C→T	5.1%	L103F (CTC→TTC)	PP_2257 →	aerotaxis receptor
RA	2,573,599	A→G	5.2%	E104E (GAA→GAG)	PP_2257 →	aerotaxis receptor
RA	2,576,479	C→G	6.7%	A538G (GCC→GGC)	PP_2258 →	sensory box protein
RA	2,576,484	C→G	6.7%	P540A (CCG→GCG)	PP_2258 →	sensory box protein
RA	2,578,487	C→A	7.6%	intergenic (‑50/‑147)	PP_2259 ← / → PP_2260	sigma‑54 dependent transcriptional regulator/glycerol‑phosphate ABC transporter ATP‑binding protein
RA	2,578,490	G→C	5.5%	intergenic (‑53/‑144)	PP_2259 ← / → PP_2260	sigma‑54 dependent transcriptional regulator/glycerol‑phosphate ABC transporter ATP‑binding protein
RA	2,578,493	T→G	7.1%	intergenic (‑56/‑141)	PP_2259 ← / → PP_2260	sigma‑54 dependent transcriptional regulator/glycerol‑phosphate ABC transporter ATP‑binding protein
RA	2,628,429	A→C	7.4%	A16A (GCA→GCC)	clpP →	ATP‑dependent Clp protease proteolytic subunit
RA	2,628,430	G→T	7.4%	G17C (GGC→TGC)	clpP →	ATP‑dependent Clp protease proteolytic subunit
RA	2,631,184	C→G	11.5%	L202L (CTC→CTG)	lon‑II →	DNA‑binding ATP‑dependent protease
RA	2,631,186	T→A	12.7%	L203Q (CTG→CAG)	lon‑II →	DNA‑binding ATP‑dependent protease
RA	2,631,188	C→G	11.1%	Q204E (CAG→GAG)	lon‑II →	DNA‑binding ATP‑dependent protease
RA	2,634,559:1	+C	5.2%	coding (978/1872 nt)	PP_2304 →	peptidyl‑prolyl cis‑trans isomerase D
RA	2,634,566	Δ1 bp	5.5%	coding (985/1872 nt)	PP_2304 →	peptidyl‑prolyl cis‑trans isomerase D
RA	2,650,131	C→A	7.2%	intergenic (+27/+107)	PP_2320 → / ← oprI	hypothetical protein/major outer membrane lipoprotein
RA	2,650,134	T→A	7.1%	intergenic (+30/+104)	PP_2320 → / ← oprI	hypothetical protein/major outer membrane lipoprotein
RA	2,650,137	T→G	7.1%	intergenic (+33/+101)	PP_2320 → / ← oprI	hypothetical protein/major outer membrane lipoprotein
RA	2,651,319	G→C	16.9%	intergenic (+41/+29)	PP_2323 → / ← aroF‑I	hypothetical protein/tyr‑sensitive phospho‑2‑dehydro‑3‑deoxyheptonate aldolase
RA	2,668,096	T→G	5.5%	intergenic (+71/‑96)	prpF → / → prpD	aconitate isomerase/2‑methylcitrate dehydratase
RA	2,668,105	G→C	6.7%	intergenic (+80/‑87)	prpF → / → prpD	aconitate isomerase/2‑methylcitrate dehydratase
RA	2,668,106	G→A	7.6%	intergenic (+81/‑86)	prpF → / → prpD	aconitate isomerase/2‑methylcitrate dehydratase
RA	2,668,109	T→C	5.6%	intergenic (+84/‑83)	prpF → / → prpD	aconitate isomerase/2‑methylcitrate dehydratase
RA	2,668,110	G→A	7.4%	intergenic (+85/‑82)	prpF → / → prpD	aconitate isomerase/2‑methylcitrate dehydratase
RA	2,668,113	T→C	6.6%	intergenic (+88/‑79)	prpF → / → prpD	aconitate isomerase/2‑methylcitrate dehydratase
RA	2,668,114	G→C	6.7%	intergenic (+89/‑78)	prpF → / → prpD	aconitate isomerase/2‑methylcitrate dehydratase
RA	2,668,122	Δ1 bp	7.2%	intergenic (+97/‑70)	prpF → / → prpD	aconitate isomerase/2‑methylcitrate dehydratase
RA	2,668,124	C→A	7.4%	intergenic (+99/‑68)	prpF → / → prpD	aconitate isomerase/2‑methylcitrate dehydratase
RA	2,669,714	T→G	15.4%	intergenic (+38/+37)	prpD → / ← acnB	2‑methylcitrate dehydratase/aconitate hydratase B
RA	2,669,717	C→A	15.6%	intergenic (+41/+34)	prpD → / ← acnB	2‑methylcitrate dehydratase/aconitate hydratase B
RA	2,673,147	Δ1 bp	8.6%	coding (418/519 nt)	PP_2340 →	hypothetical protein
RA	2,673,153:1	+C	8.5%	coding (424/519 nt)	PP_2340 →	hypothetical protein
RA	2,693,846	G→A	8.4%	A32T (GCC→ACC)	PP_2362 →	usher protein
RA	2,693,853	T→C	7.5%	V34A (GTC→GCC)	PP_2362 →	usher protein
RA	2,698,550	G→A	7.8%	D235D (GAC→GAT) ‡	PP_2365 ←	AraC family transcriptional regulator
RA	2,698,552	C→G	8.3%	D235H (GAC→CAC) ‡	PP_2365 ←	AraC family transcriptional regulator
RA	2,698,554	T→C	8.0%	Y234C (TAT→TGT)	PP_2365 ←	AraC family transcriptional regulator
RA	2,708,585	A→G	7.1%	W223R (TGG→CGG)	cysI ←	sulfite reductase hemoprotein subunit beta
RA	2,708,586	C→T	7.0%	P222P (CCG→CCA)	cysI ←	sulfite reductase hemoprotein subunit beta
RA	2,719,298	Δ1 bp	7.6%	coding (382/585 nt)	nfuA →	Fe/S biogenesis protein NfuA
RA	2,719,306:1	+T	7.3%	coding (390/585 nt)	nfuA →	Fe/S biogenesis protein NfuA
RA	2,729,285	T→G	5.5%	intergenic (+49/‑312)	PP_2390 → / → PP_2392	LysR family transcriptional regulator/MFS transporter
RA	2,729,577	T→C	6.1%	intergenic (+341/‑20)	PP_2390 → / → PP_2392	LysR family transcriptional regulator/MFS transporter
RA	2,730,937	C→G	7.9%	R77R (CGC→CGG)	polB →	DNA polymerase II
RA	2,730,938	C→G	7.9%	P78A (CCG→GCG)	polB →	DNA polymerase II
RA	2,742,960	C→T	5.9%	H5Y (CAC→TAC) ‡	PP_2397 →	EF hand domain‑containing protein
RA	2,742,961	A→G	5.8%	H5R (CAC→CGC) ‡	PP_2397 →	EF hand domain‑containing protein
RA	2,751,007	G→T	5.7%	intergenic (‑29/‑210)	aroQ‑II ← / → czcC‑II	type II 3‑dehydroquinate dehydratase/cobalt‑zinc‑cadmium resistance protein
RA	2,756,879	A→C	6.4%	intergenic (+15/+18)	czcA‑II → / ← PP_2411	cation efflux system protein/MFS transporter
RA	2,756,880	A→T	6.4%	intergenic (+16/+17)	czcA‑II → / ← PP_2411	cation efflux system protein/MFS transporter
RA	2,756,881	G→T	6.5%	intergenic (+17/+16)	czcA‑II → / ← PP_2411	cation efflux system protein/MFS transporter
RA	2,759,076	G→T	7.3%	P44Q (CCG→CAG)	PP_2412 ←	ParA family protein
RA	2,759,083	G→C	8.8%	L42V (CTC→GTC)	PP_2412 ←	ParA family protein
RA	2,759,084	G→C	7.7%	D41E (GAC→GAG)	PP_2412 ←	ParA family protein
RA	2,759,091	A→C	7.5%	L39R (CTG→CGG)	PP_2412 ←	ParA family protein
RA	2,763,234	C→G	5.5%	R240R (CGG→CGC)	PP_2417 ←	iron ABC transporter permease
RA	2,772,320	T→C	6.6%	Q180R (CAG→CGG)	PP_2425 ←	AraC family transcriptional regulator
RA	2,772,323	G→A	6.0%	P179L (CCG→CTG)	PP_2425 ←	AraC family transcriptional regulator
RA	2,777,043	C→G	8.1%	A169P (GCA→CCA)	PP_2429 ←	membrane protein
RA	2,777,050	C→G	7.5%	W166C (TGG→TGC)	PP_2429 ←	membrane protein
RA	2,787,673	C→G	5.2%	intergenic (+77/‑48)	ahpC → / → ahpF	peroxiredoxin/alkylhydroperoxide reductase small subunit/alkyl hydroperoxide reductase subunit F
RA	2,788,115	C→T	8.1%	P132L (CCG→CTG)	ahpF →	alkyl hydroperoxide reductase subunit F
RA	2,788,121	T→A	8.3%	V134D (GTC→GAC)	ahpF →	alkyl hydroperoxide reductase subunit F
RA	2,788,127	A→G	7.7%	Q136R (CAG→CGG)	ahpF →	alkyl hydroperoxide reductase subunit F
RA	2,793,795	G→T	6.6%	intergenic (+61/+66)	PP_2445 → / ← PP_2446	membrane protein/hypothetical protein
RA	2,793,798	A→C	5.7%	intergenic (+64/+63)	PP_2445 → / ← PP_2446	membrane protein/hypothetical protein
RA	2,793,800	T→G	6.0%	intergenic (+66/+61)	PP_2445 → / ← PP_2446	membrane protein/hypothetical protein
RA	2,793,801	G→T	5.9%	intergenic (+67/+60)	PP_2445 → / ← PP_2446	membrane protein/hypothetical protein
RA	2,793,804	A→C	8.2%	intergenic (+70/+57)	PP_2445 → / ← PP_2446	membrane protein/hypothetical protein
RA	2,799,214	A→G	6.6%	intergenic (‑185/+31)	PP_2452 ← / ← ansB	hypothetical protein/glutaminase‑asparaginase
RA	2,799,220	C→T	8.5%	intergenic (‑191/+25)	PP_2452 ← / ← ansB	hypothetical protein/glutaminase‑asparaginase
RA	2,799,223	A→G	8.5%	intergenic (‑194/+22)	PP_2452 ← / ← ansB	hypothetical protein/glutaminase‑asparaginase
RA	2,799,229	C→T	6.7%	intergenic (‑200/+16)	PP_2452 ← / ← ansB	hypothetical protein/glutaminase‑asparaginase
RA	2,810,636	C→A	9.6%	P334T (CCG→ACG)	thrS →	threonine‑‑tRNA ligase
RA	2,810,641	C→G	7.0%	C335W (TGC→TGG)	thrS →	threonine‑‑tRNA ligase
RA	2,810,646	T→G	6.8%	V337G (GTG→GGG)	thrS →	threonine‑‑tRNA ligase
RA	2,812,818	C→T	11.2%	intergenic (+69/‑41)	rplT → / → pheS	50S ribosomal protein L20/phenylalanine‑‑tRNA ligase subunit alpha
RA	2,812,821	C→G	11.0%	intergenic (+72/‑38)	rplT → / → pheS	50S ribosomal protein L20/phenylalanine‑‑tRNA ligase subunit alpha
RA	2,812,824	A→G	11.1%	intergenic (+75/‑35)	rplT → / → pheS	50S ribosomal protein L20/phenylalanine‑‑tRNA ligase subunit alpha
RA	2,822,938	G→C	7.5%	A156A (GCG→GCC)	curA →	NADPH‑dependent curcumin/dihydrocurcumin reductase
RA	2,822,941	G→C	7.5%	A157A (GCG→GCC)	curA →	NADPH‑dependent curcumin/dihydrocurcumin reductase
RA	2,826,868	G→C	5.7%	A80P (GCA→CCA)	PP_2479 →	cytochrome c family protein
RA	2,826,873	G→C	5.7%	W81C (TGG→TGC)	PP_2479 →	cytochrome c family protein
RA	2,852,440	T→A	9.8%	Q312L (CAG→CTG)	PP_2505 ←	GAF domain/GGDEF domain‑containing protein
RA	2,861,908	T→A	5.1%	V62V (GTA→GTT)	gllC ←	4‑carboxy‑4‑hydroxy‑2‑oxoadipic acid aldolase
RA	2,861,913	C→T	5.1%	A61T (GCG→ACG)	gllC ←	4‑carboxy‑4‑hydroxy‑2‑oxoadipic acid aldolase
RA	2,868,534	C→G	7.5%	intergenic (+30/‑901)	PP_2520 → / → PP_2522	hypothetical protein/transposase
RA	2,873,690	G→A	5.9%	V143M (GTG→ATG) ‡	cigR →	membrane protein
RA	2,873,691	T→C	5.9%	V143A (GTG→GCG) ‡	cigR →	membrane protein
RA	2,880,359	T→C	8.0%	V53A (GTG→GCG)	PP_2535 →	transport protein
RA	2,880,362	T→C	7.4%	L54P (CTG→CCG)	PP_2535 →	transport protein
RA	2,880,367	G→A	7.3%	G56S (GGC→AGC)	PP_2535 →	transport protein
RA	2,880,370	G→A	7.0%	A57T (GCG→ACG)	PP_2535 →	transport protein
RA	2,884,855	C→G	5.2%	P93A (CCG→GCG) ‡	PP_2540 →	short‑chain dehydrogenase/reductase family oxidoreductase
RA	2,884,856	C→G	5.2%	P93R (CCG→CGG) ‡	PP_2540 →	short‑chain dehydrogenase/reductase family oxidoreductase
RA	2,891,846	A→T	10.6%	L13Q (CTG→CAG)	PP_2546 ←	membrane protein
RA	2,891,849	A→T	10.5%	L12Q (CTG→CAG)	PP_2546 ←	membrane protein
RA	2,894,006	C→T	5.9%	A318V (GCG→GTG)	PP_2548 →	sugar MFS transporter
RA	2,894,016	G→C	6.8%	A321A (GCG→GCC)	PP_2548 →	sugar MFS transporter
RA	2,894,026	A→G	5.1%	T325A (ACC→GCC)	PP_2548 →	sugar MFS transporter
RA	2,899,207:1	+C	6.0%	coding (1389/1413 nt)	PP_2552 →	DOPA decarboxylase
RA	2,899,213	Δ1 bp	6.0%	coding (1395/1413 nt)	PP_2552 →	DOPA decarboxylase
RA	2,908,028	G→A	5.5%	A237V (GCC→GTC)	hasE ←	secretion metalloprotease
RA	2,908,033	G→T	5.5%	G235G (GGC→GGA)	hasE ←	secretion metalloprotease
RA	2,908,037	G→C	5.9%	A234G (GCC→GGC)	hasE ←	secretion metalloprotease
RA	2,908,041	A→C	5.8%	S233A (TCC→GCC)	hasE ←	secretion metalloprotease
RA	2,914,470	C→G	5.2%	Y1149* (TAC→TAG)	PP_2561 →	hemolysin‑type calcium‑binding bacteriocin
RA	2,925,446	A→T	7.4%	intergenic (‑151/+414)	PP_2563 ← / ← PP_2564	antibiotic biosynthesis protein/quercetin 2,3‑dioxygenase
RA	2,935,901	C→G	7.4%	intergenic (+153/‑109)	PP_2568 → / → PP_2569	ring‑cleaving dioxygenase/MHS family metabolite MFS transporter
RA	2,937,810	G→T	17.0%	R430S (CGC→AGC)	PP_2570 ←	transposase
RA	2,937,811	A→T	17.3%	L429L (CTT→CTA) ‡	PP_2570 ←	transposase
RA	2,937,812	A→C	16.6%	L429R (CTT→CGT) ‡	PP_2570 ←	transposase
RA	2,941,735	C→T	6.8%	intergenic (+12/+34)	PP_2574 → / ← PP_2575	LysR family transcriptional regulator/hypothetical protein
RA	2,941,738	C→T	6.8%	intergenic (+15/+31)	PP_2574 → / ← PP_2575	LysR family transcriptional regulator/hypothetical protein
RA	2,941,741	G→T	6.7%	intergenic (+18/+28)	PP_2574 → / ← PP_2575	LysR family transcriptional regulator/hypothetical protein
RA	2,941,744	A→C	6.7%	intergenic (+21/+25)	PP_2574 → / ← PP_2575	LysR family transcriptional regulator/hypothetical protein
RA	2,941,747	A→G	6.0%	intergenic (+24/+22)	PP_2574 → / ← PP_2575	LysR family transcriptional regulator/hypothetical protein
RA	2,941,750	A→G	6.8%	intergenic (+27/+19)	PP_2574 → / ← PP_2575	LysR family transcriptional regulator/hypothetical protein
RA	2,945,738	C→T	6.4%	L158L (CTG→TTG)	PP_2578 →	hypothetical protein
RA	2,945,745	A→G	6.1%	K160R (AAG→AGG)	PP_2578 →	hypothetical protein
RA	2,948,640	T→G	12.4%	D162A (GAC→GCC) ‡	PP_2582 ←	heme oxygenase
RA	2,948,641	C→A	11.5%	D162Y (GAC→TAC) ‡	PP_2582 ←	heme oxygenase
RA	2,949,837	A→T	7.1%	intergenic (+59/+54)	PP_2583 → / ← oguA	acetyltransferase/8‑oxoguanine deaminase
RA	2,949,838	A→T	6.7%	intergenic (+60/+53)	PP_2583 → / ← oguA	acetyltransferase/8‑oxoguanine deaminase
RA	2,949,839	A→T	6.9%	intergenic (+61/+52)	PP_2583 → / ← oguA	acetyltransferase/8‑oxoguanine deaminase
RA	2,951,377	G→C	20.2%	intergenic (‑113/+48)	oguA ← / ← PP_2585	8‑oxoguanine deaminase/alpha‑ketoglutaric semialdehyde dehydrogenase
RA	2,951,384	A→C	19.6%	intergenic (‑120/+41)	oguA ← / ← PP_2585	8‑oxoguanine deaminase/alpha‑ketoglutaric semialdehyde dehydrogenase
RA	2,951,385	G→T	20.6%	intergenic (‑121/+40)	oguA ← / ← PP_2585	8‑oxoguanine deaminase/alpha‑ketoglutaric semialdehyde dehydrogenase
RA	2,951,392	G→C	17.6%	intergenic (‑128/+33)	oguA ← / ← PP_2585	8‑oxoguanine deaminase/alpha‑ketoglutaric semialdehyde dehydrogenase
RA	2,957,161	C→G	9.0%	intergenic (+73/‑123)	PP_2588 → / → PP_2589	class III aminotransferase/aldehyde dehydrogenase family protein
RA	2,957,167	T→G	8.2%	intergenic (+79/‑117)	PP_2588 → / → PP_2589	class III aminotransferase/aldehyde dehydrogenase family protein
RA	2,958,833	T→C	7.4%	intergenic (+56/+86)	PP_2589 → / ← PP_2590	aldehyde dehydrogenase family protein/ferric siderophore receptor
RA	2,958,842	G→C	7.8%	intergenic (+65/+77)	PP_2589 → / ← PP_2590	aldehyde dehydrogenase family protein/ferric siderophore receptor
RA	2,958,843	T→C	7.9%	intergenic (+66/+76)	PP_2589 → / ← PP_2590	aldehyde dehydrogenase family protein/ferric siderophore receptor
RA	2,958,846	G→C	7.9%	intergenic (+69/+73)	PP_2589 → / ← PP_2590	aldehyde dehydrogenase family protein/ferric siderophore receptor
RA	2,958,849	G→A	7.9%	intergenic (+72/+70)	PP_2589 → / ← PP_2590	aldehyde dehydrogenase family protein/ferric siderophore receptor
RA	2,958,850	G→C	7.9%	intergenic (+73/+69)	PP_2589 → / ← PP_2590	aldehyde dehydrogenase family protein/ferric siderophore receptor
RA	2,958,859	G→A	9.0%	intergenic (+82/+60)	PP_2589 → / ← PP_2590	aldehyde dehydrogenase family protein/ferric siderophore receptor
RA	2,966,460	T→A	5.7%	R70R (CGA→CGT)	PP_2595 ←	ABC transporter permease/ATP‑binding protein
RA	2,972,686	G→C	6.0%	L411V (CTG→GTG)	PP_2600 ←	hypothetical protein
RA	2,972,689	G→C	6.0%	P410A (CCG→GCG)	PP_2600 ←	hypothetical protein
RA	2,973,302	Δ1 bp	6.1%	coding (615/1713 nt)	PP_2600 ←	hypothetical protein
RA	2,973,308:1	+T	6.4%	coding (609/1713 nt)	PP_2600 ←	hypothetical protein
RA	2,982,735	C→G	10.0%	G163R (GGT→CGT)	PP_2608 ←	shikimate dehydrogenase family protein
RA	2,982,740	C→G	11.8%	R161P (CGC→CCC)	PP_2608 ←	shikimate dehydrogenase family protein
RA	2,989,258	G→T	7.0%	R43R (CGG→AGG)	PP_2613 ←	hypothetical protein
RA	2,989,261	A→C	7.0%	Y42D (TAT→GAT)	PP_2613 ←	hypothetical protein
RA	3,001,858	C→G	5.4%	A180G (GCC→GGC)	PP_2625 →	hypothetical protein
RA	3,001,864	G→A	6.5%	R182Q (CGG→CAG)	PP_2625 →	hypothetical protein
RA	3,001,867	G→C	7.0%	G183A (GGC→GCC)	PP_2625 →	hypothetical protein
RA	3,001,870	T→C	6.9%	L184P (CTG→CCG)	PP_2625 →	hypothetical protein
RA	3,001,876	C→G	7.8%	A186G (GCC→GGC)	PP_2625 →	hypothetical protein
RA	3,004,238	T→A	8.8%	V259D (GTC→GAC)	PP_2627 →	membrane protein
RA	3,007,720	C→A	5.5%	S473I (AGC→ATC)	PP_2628 ←	ABC transporter ATP‑binding protein
RA	3,007,723	T→G	5.6%	D472A (GAT→GCT)	PP_2628 ←	ABC transporter ATP‑binding protein
RA	3,008,356	A→G	7.8%	M261T (ATG→ACG)	PP_2628 ←	ABC transporter ATP‑binding protein
RA	3,008,361	C→T	8.2%	S259S (TCG→TCA)	PP_2628 ←	ABC transporter ATP‑binding protein
RA	3,021,073	A→T	6.0%	Q523L (CAG→CTG)	PP_2638 →	cellulose synthase operon protein C
RA	3,028,711	G→A	6.3%	A107A (GCG→GCA)	pcaY →	aromatic acid chemoreceptor
RA	3,030,398:1	+C	5.0%	intergenic (+355/‑339)	pcaY → / → mgtA	aromatic acid chemoreceptor/ATP‑dependent magnesium transporter
RA	3,030,456	C→G	6.0%	intergenic (+413/‑281)	pcaY → / → mgtA	aromatic acid chemoreceptor/ATP‑dependent magnesium transporter
RA	3,030,460	G→C	6.2%	intergenic (+417/‑277)	pcaY → / → mgtA	aromatic acid chemoreceptor/ATP‑dependent magnesium transporter
RA	3,030,463	G→C	6.0%	intergenic (+420/‑274)	pcaY → / → mgtA	aromatic acid chemoreceptor/ATP‑dependent magnesium transporter
RA	3,030,762	C→T	6.6%	P9L (CCG→CTG)	mgtA →	ATP‑dependent magnesium transporter
RA	3,030,765	A→G	6.1%	Q10R (CAG→CGG)	mgtA →	ATP‑dependent magnesium transporter
RA	3,038,699	C→T	7.9%	Q310* (CAG→TAG) ‡	gbd →	4‑hydroxybutyrate dehydrogenase
RA	3,038,700	A→G	7.6%	Q310R (CAG→CGG) ‡	gbd →	4‑hydroxybutyrate dehydrogenase
RA	3,040,639	G→C	6.9%	G67R (GGC→CGC)	PP_2652 →	hydratase/decarboxylase
RA	3,041,016	A→C	6.4%	Q192H (CAA→CAC)	PP_2652 →	hydratase/decarboxylase
RA	3,047,336	C→G	5.2%	L16V (CTG→GTG)	PP_2660 →	hypothetical protein
RA	3,048,625	T→C	6.6%	intergenic (+37/‑259)	PP_2661 → / → PP_2662	hypothetical protein/hypothetical protein
RA	3,048,633	A→G	9.0%	intergenic (+45/‑251)	PP_2661 → / → PP_2662	hypothetical protein/hypothetical protein
RA	3,048,647	G→T	14.7%	intergenic (+59/‑237)	PP_2661 → / → PP_2662	hypothetical protein/hypothetical protein
RA	3,048,648	A→C	15.1%	intergenic (+60/‑236)	PP_2661 → / → PP_2662	hypothetical protein/hypothetical protein
RA	3,048,662	C→T	12.3%	intergenic (+74/‑222)	PP_2661 → / → PP_2662	hypothetical protein/hypothetical protein
RA	3,048,667	G→A	6.8%	intergenic (+79/‑217)	PP_2661 → / → PP_2662	hypothetical protein/hypothetical protein
RA	3,048,670	G→A	7.1%	intergenic (+82/‑214)	PP_2661 → / → PP_2662	hypothetical protein/hypothetical protein
RA	3,049,417	C→T	5.1%	S178S (AGC→AGT)	PP_2662 →	hypothetical protein
RA	3,051,881	T→A	7.8%	Y180N (TAC→AAC) ‡	PP_2664 →	two‑component system sensor histidine kinase/response regulator
RA	3,051,882	A→G	7.8%	Y180C (TAC→TGC) ‡	PP_2664 →	two‑component system sensor histidine kinase/response regulator
RA	3,051,887	C→T	8.2%	L182L (CTG→TTG) ‡	PP_2664 →	two‑component system sensor histidine kinase/response regulator
RA	3,051,888	T→A	8.3%	L182Q (CTG→CAG) ‡	PP_2664 →	two‑component system sensor histidine kinase/response regulator
RA	3,057,001:1	+A	8.3%	coding (390/990 nt)	PP_2669 ←	outer membrane protein
RA	3,057,006	Δ1 bp	8.0%	coding (385/990 nt)	PP_2669 ←	outer membrane protein
RA	3,060,597	A→T	7.0%	K187* (AAG→TAG) ‡	exaE →	transcriptional regulator ExaE
RA	3,060,598	A→T	7.1%	K187M (AAG→ATG) ‡	exaE →	transcriptional regulator ExaE
RA	3,066,366	G→C	5.4%	V153L (GTG→CTG)	PP_2678 →	hydrolase
RA	3,066,370	T→A	5.4%	L154Q (CTG→CAG)	PP_2678 →	hydrolase
RA	3,066,374	G→C	5.4%	Q155H (CAG→CAC)	PP_2678 →	hydrolase
RA	3,070,500	T→C	6.1%	intergenic (+25/‑329)	aldB‑II → / → pqqD‑II	aldehyde dehydrogenase/coenzyme PQQ synthesis protein D
RA	3,071,254	T→A	6.4%	C22S (TGC→AGC)	yiaY →	Fe‑containing alcohol dehydrogenase
RA	3,076,135	A→G	7.2%	intergenic (‑40/+34)	PP_2685 ← / ← PP_2686	hypothetical protein/transglutaminase domain‑containing protein
RA	3,076,137	T→G	6.3%	intergenic (‑42/+32)	PP_2685 ← / ← PP_2686	hypothetical protein/transglutaminase domain‑containing protein
RA	3,076,138	C→A	7.1%	intergenic (‑43/+31)	PP_2685 ← / ← PP_2686	hypothetical protein/transglutaminase domain‑containing protein
RA	3,076,140	C→T	6.3%	intergenic (‑45/+29)	PP_2685 ← / ← PP_2686	hypothetical protein/transglutaminase domain‑containing protein
RA	3,077,153	A→C	5.6%	I248S (ATC→AGC)	PP_2687 ←	hypothetical protein
RA	3,079,678	C→T	8.7%	intergenic (‑370/+64)	PP_2688 ← / ← PP_2689	hypothetical protein/endoribonuclease
RA	3,079,684	G→C	8.6%	intergenic (‑376/+58)	PP_2688 ← / ← PP_2689	hypothetical protein/endoribonuclease
RA	3,079,687	G→C	9.7%	intergenic (‑379/+55)	PP_2688 ← / ← PP_2689	hypothetical protein/endoribonuclease
RA	3,079,693	A→G	9.3%	intergenic (‑385/+49)	PP_2688 ← / ← PP_2689	hypothetical protein/endoribonuclease
RA	3,082,807	T→A	5.4%	D435V (GAC→GTC)	PP_2692 ←	BCCT family transporter
RA	3,096,109	G→A	5.7%	R102H (CGC→CAC)	PP_2704 →	M20/M25/M40 family peptidase
RA	3,097,467	G→T	5.6%	E9D (GAG→GAT)	PP_2706 →	hypothetical protein
RA	3,137,695	C→T	9.4%	intergenic (+80/‑210)	PP_2753 → / → PP_2754	ABC transporter ATP‑binding protein/OprD family outer membrane porin
RA	3,137,696	A→G	8.8%	intergenic (+81/‑209)	PP_2753 → / → PP_2754	ABC transporter ATP‑binding protein/OprD family outer membrane porin
RA	3,141,550:1	+A	5.8%	coding (424/972 nt)	PP_2757 →	sugar‑binding protein
RA	3,141,556	G→T	5.9%	A144S (GCC→TCC)	PP_2757 →	sugar‑binding protein
RA	3,146,621	G→C	7.3%	intergenic (+14/+52)	PP_2761 → / ← sfnA	ribose ABC transporter permease/acyl‑CoA dehydrogenase/oxidase family protein
RA	3,146,622	G→C	6.3%	intergenic (+15/+51)	PP_2761 → / ← sfnA	ribose ABC transporter permease/acyl‑CoA dehydrogenase/oxidase family protein
RA	3,146,654	T→C	5.7%	intergenic (+47/+19)	PP_2761 → / ← sfnA	ribose ABC transporter permease/acyl‑CoA dehydrogenase/oxidase family protein
RA	3,146,657	G→A	5.5%	intergenic (+50/+16)	PP_2761 → / ← sfnA	ribose ABC transporter permease/acyl‑CoA dehydrogenase/oxidase family protein
RA	3,149,283	G→T	9.9%	L149L (CTG→CTT)	PP_2765 →	sulfonate monooxygenase MsuD
RA	3,149,284	A→C	10.6%	K150Q (AAG→CAG)	PP_2765 →	sulfonate monooxygenase MsuD
RA	3,155,407	C→G	8.4%	G300A (GGC→GCC)	PP_2771 ←	sigma‑54 dependent transcriptional regulator
RA	3,159,105	G→C	9.8%	A361P (GCA→CCA)	opuA →	glycine betaine ABC transporter ATP‑binding protein/permease
RA	3,164,076	G→A	5.9%	A275T (GCG→ACG)	PP_2778 →	3‑oxoacyl‑ACP synthase
RA	3,165,997	A→C	5.5%	Q129P (CAG→CCG) ‡	PP_2780 →	3‑oxoacyl‑ACP synthase
RA	3,165,998	G→T	5.5%	Q129H (CAG→CAT) ‡	PP_2780 →	3‑oxoacyl‑ACP synthase
RA	3,166,099	G→C	9.0%	G163A (GGC→GCC)	PP_2780 →	3‑oxoacyl‑ACP synthase
RA	3,172,004	G→C	6.4%	R78P (CGG→CCG)	PP_2784 →	short‑chain dehydrogenase/reductase family oxidoreductase
RA	3,189,321	G→C	9.0%	L458V (CTG→GTG)	PP_2799 ←	class III aminotransferase
RA	3,189,322	G→C	8.5%	H457Q (CAC→CAG)	PP_2799 ←	class III aminotransferase
RA	3,199,444	Δ1 bp	8.9%	coding (114/582 nt)	PP_2806 ←	TetR family transcriptional regulator
RA	3,199,450	C→G	11.7%	A36A (GCG→GCC)	PP_2806 ←	TetR family transcriptional regulator
RA	3,199,455:1	+A	11.0%	coding (103/582 nt)	PP_2806 ←	TetR family transcriptional regulator
RA	3,203,606	A→T	5.7%	H105L (CAT→CTT)	PP_2810 →	hypothetical protein
RA	3,218,704:1	+C	5.3%	intergenic (+44/+39)	oprJ → / ← nfxB	outer membrane protein OprJ/HTH‑type transcriptional regulator NfxB
RA	3,218,711	Δ1 bp	5.4%	intergenic (+51/+32)	oprJ → / ← nfxB	outer membrane protein OprJ/HTH‑type transcriptional regulator NfxB
RA	3,218,837	A→T	7.5%	V155D (GTC→GAC)	nfxB ←	HTH‑type transcriptional regulator NfxB
RA	3,223,265	A→C	13.4%	intergenic (‑529/+31)	PP_2823 ← / ← PP_2824	methyl‑accepting chemotaxis transducer/TetR family transcriptional regulator
RA	3,223,266	G→T	12.9%	intergenic (‑530/+30)	PP_2823 ← / ← PP_2824	methyl‑accepting chemotaxis transducer/TetR family transcriptional regulator
RA	3,238,188	T→G	6.6%	L195R (CTG→CGG)	PP_2836 →	2‑keto‑3‑deoxyxylonate dehydratase
RA	3,238,190	T→A	5.9%	S196T (TCC→ACC) ‡	PP_2836 →	2‑keto‑3‑deoxyxylonate dehydratase
RA	3,238,192	C→A	6.0%	S196S (TCC→TCA) ‡	PP_2836 →	2‑keto‑3‑deoxyxylonate dehydratase
RA	3,249,705	A→C	8.9%	K428Q (AAG→CAG)	ureC →	urease subunit alpha
RA	3,249,710	G→T	7.4%	L429L (CTG→CTT)	ureC →	urease subunit alpha
RA	3,252,535	G→A	6.5%	intergenic (+22/+221)	ureG → / ← PP_2851	urease accessory protein/hypothetical protein
RA	3,252,540	T→C	6.4%	intergenic (+27/+216)	ureG → / ← PP_2851	urease accessory protein/hypothetical protein
RA	3,253,880	A→G	5.3%	V634A (GTG→GCG)	PP_2852 ←	sulfatase domain‑containing protein
RA	3,255,886	C→T	6.4%	intergenic (‑106/+30)	PP_2852 ← / ← PP_2853	sulfatase domain‑containing protein/hypothetical protein
RA	3,255,889	T→G	5.7%	intergenic (‑109/+27)	PP_2852 ← / ← PP_2853	sulfatase domain‑containing protein/hypothetical protein
RA	3,255,892	C→A	6.3%	intergenic (‑112/+24)	PP_2852 ← / ← PP_2853	sulfatase domain‑containing protein/hypothetical protein
RA	3,255,895	A→G	6.4%	intergenic (‑115/+21)	PP_2852 ← / ← PP_2853	sulfatase domain‑containing protein/hypothetical protein
RA	3,260,389	G→A	6.3%	T158T (ACC→ACT) ‡	PP_2857 ←	hypothetical protein
RA	3,260,390	G→C	6.5%	T158S (ACC→AGC) ‡	PP_2857 ←	hypothetical protein
RA	3,260,391	T→C	6.4%	T158A (ACC→GCC) ‡	PP_2857 ←	hypothetical protein
RA	3,263,396:1	+A	6.3%	coding (1194/1635 nt)	PP_2861 ←	methyl‑accepting chemotaxis transducer
RA	3,263,401	Δ1 bp	6.2%	coding (1189/1635 nt)	PP_2861 ←	methyl‑accepting chemotaxis transducer
RA	3,274,879	T→A	6.9%	H198Q (CAT→CAA)	eamA →	O‑acetylserine/cysteine export transporter
RA	3,274,881	C→G	7.0%	A199G (GCC→GGC)	eamA →	O‑acetylserine/cysteine export transporter
RA	3,274,883	T→A	6.8%	L200M (TTG→ATG)	eamA →	O‑acetylserine/cysteine export transporter
RA	3,282,323	Δ1 bp	11.5%	coding (86/300 nt)	PP_2883 ←	hypothetical protein
RA	3,282,330	C→T	11.4%	E27K (GAG→AAG)	PP_2883 ←	hypothetical protein
RA	3,282,331	A→G	10.7%	L26L (CTT→CTC)	PP_2883 ←	hypothetical protein
RA	3,282,337:1	+C	13.2%	coding (72/300 nt)	PP_2883 ←	hypothetical protein
RA	3,287,319	T→C	11.3%	intergenic (+17/+24)	PP_2889 → / ← xthA	transmembrane regulator PrtR/exodeoxyribonuclease III/apurinic/apyrimidinic endodeoxyribonuclease VI
RA	3,287,320	G→A	11.3%	intergenic (+18/+23)	PP_2889 → / ← xthA	transmembrane regulator PrtR/exodeoxyribonuclease III/apurinic/apyrimidinic endodeoxyribonuclease VI
RA	3,294,391	G→A	7.4%	G1211E (GGG→GAG)	PP_2893 →	hypothetical protein
RA	3,294,395	G→T	6.5%	L1212L (CTG→CTT)	PP_2893 →	hypothetical protein
RA	3,294,398	A→C	6.8%	A1213A (GCA→GCC)	PP_2893 →	hypothetical protein
RA	3,298,071	G→C	6.4%	G82A (GGT→GCT)	pvdQ →	acyl‑homoserine lactone acylase PvdQ
RA	3,298,073	G→C	6.4%	E83Q (GAG→CAG) ‡	pvdQ →	acyl‑homoserine lactone acylase PvdQ
RA	3,298,075	G→C	6.4%	E83D (GAG→GAC) ‡	pvdQ →	acyl‑homoserine lactone acylase PvdQ
RA	3,300,198:1	+C	5.6%	intergenic (+53/+29)	pvdQ → / ← lpxH	acyl‑homoserine lactone acylase PvdQ/UDP‑2,3‑diacylglucosamine hydrolase
RA	3,300,205	T→A	10.0%	intergenic (+60/+22)	pvdQ → / ← lpxH	acyl‑homoserine lactone acylase PvdQ/UDP‑2,3‑diacylglucosamine hydrolase
RA	3,300,206	T→A	10.1%	intergenic (+61/+21)	pvdQ → / ← lpxH	acyl‑homoserine lactone acylase PvdQ/UDP‑2,3‑diacylglucosamine hydrolase
RA	3,308,144	A→C	6.0%	D103A (GAT→GCT)	csiD →	carbon starvation induced protein
RA	3,308,146	G→C	5.9%	D104H (GAC→CAC)	csiD →	carbon starvation induced protein
RA	3,308,151	G→C	5.7%	V105V (GTG→GTC)	csiD →	carbon starvation induced protein
RA	3,308,153	G→T	6.6%	S106I (AGC→ATC)	csiD →	carbon starvation induced protein
RA	3,312,730	G→T	7.2%	intergenic (+28/‑134)	PP_2912 → / → hemB	hypothetical protein/5‑aminolevulinate dehydratase
RA	3,312,731	T→A	7.2%	intergenic (+29/‑133)	PP_2912 → / → hemB	hypothetical protein/5‑aminolevulinate dehydratase
RA	3,312,732	T→A	10.1%	intergenic (+30/‑132)	PP_2912 → / → hemB	hypothetical protein/5‑aminolevulinate dehydratase
RA	3,312,733	A→C	7.6%	intergenic (+31/‑131)	PP_2912 → / → hemB	hypothetical protein/5‑aminolevulinate dehydratase
RA	3,313,576	A→T	6.3%	D238V (GAC→GTC)	hemB →	5‑aminolevulinate dehydratase
RA	3,315,627	A→C	6.9%	L192R (CTC→CGC)	PP_2915 ←	membrane protein
RA	3,315,630	G→T	6.8%	A191E (GCG→GAG)	PP_2915 ←	membrane protein
RA	3,329,641:1	+G	5.8%	intergenic (+102/+29)	PP_2927 → / ← PP_2928	hypothetical protein/saccharopine dehydrogenase
RA	3,329,643:1	+A	6.2%	intergenic (+104/+27)	PP_2927 → / ← PP_2928	hypothetical protein/saccharopine dehydrogenase
RA	3,329,648	Δ1 bp	5.9%	intergenic (+109/+22)	PP_2927 → / ← PP_2928	hypothetical protein/saccharopine dehydrogenase
RA	3,329,651	Δ1 bp	6.0%	intergenic (+112/+19)	PP_2927 → / ← PP_2928	hypothetical protein/saccharopine dehydrogenase
RA	3,334,996:1	+T	6.3%	coding (609/1704 nt)	PP_2932 ←	amidase family protein
RA	3,335,001	Δ1 bp	6.0%	coding (604/1704 nt)	PP_2932 ←	amidase family protein
RA	3,337,753	A→T	5.1%	D305V (GAC→GTC)	PP_2934 →	hypothetical protein
RA	3,337,825	G→C	6.5%	G329A (GGG→GCG)	PP_2934 →	hypothetical protein
RA	3,337,827	T→A	7.1%	S330T (TCG→ACG) ‡	PP_2934 →	hypothetical protein
RA	3,337,829	G→C	6.9%	S330S (TCG→TCC) ‡	PP_2934 →	hypothetical protein
RA	3,337,837:1	+T	6.0%	coding (998/1047 nt)	PP_2934 →	hypothetical protein
RA	3,340,622:1	+A	9.4%	coding (249/1587 nt)	ybiT ←	ABC‑F family ATPase
RA	3,340,627	Δ1 bp	9.5%	coding (244/1587 nt)	ybiT ←	ABC‑F family ATPase
RA	3,341,057	G→C	9.9%	A89G (GCG→GGG)	PP_2937 ←	integrase
RA	3,341,059	G→C	10.0%	P88P (CCC→CCG) ‡	PP_2937 ←	integrase
RA	3,341,061	G→C	9.7%	P88A (CCC→GCC) ‡	PP_2937 ←	integrase
RA	3,351,138	C→G	6.6%	P11A (CCA→GCA)	arfB →	peptidyl‑tRNA hydrolase
RA	3,376,478	Δ1 bp	9.0%	intergenic (+10/‑138)	PP_2975 → / → PP_2976	insertion element ISR1 protein A3/transposase
RA	3,376,482	G→C	9.5%	intergenic (+14/‑134)	PP_2975 → / → PP_2976	insertion element ISR1 protein A3/transposase
RA	3,376,485:1	+T	9.3%	intergenic (+17/‑131)	PP_2975 → / → PP_2976	insertion element ISR1 protein A3/transposase
RA	3,380,579	A→G	6.4%	N70D (AAC→GAC)	tnpT‑I →	cointegrate resolution protein T
RA	3,380,583	T→A	6.2%	L71Q (CTG→CAG)	tnpT‑I →	cointegrate resolution protein T
RA	3,385,129	C→T	5.3%	E111K (GAG→AAG)	PP_2986 ←	oxidoreductase
RA	3,385,130	A→G	5.7%	L110L (CTT→CTC)	PP_2986 ←	oxidoreductase
RA	3,396,949	C→A	6.5%	L206M (CTG→ATG) ‡	PP_3001 →	CAIB/BAIF family protein
RA	3,396,950	T→G	6.4%	L206R (CTG→CGG) ‡	PP_3001 →	CAIB/BAIF family protein
RA	3,400,798:1	+C	5.9%	coding (446/528 nt)	PP_3007 ←	hypothetical protein
RA	3,402,548	C→T	7.5%	intergenic (+29/‑123)	PP_3010 → / → PP_3011	hypothetical protein/hypothetical protein
RA	3,402,549	G→C	7.5%	intergenic (+30/‑122)	PP_3010 → / → PP_3011	hypothetical protein/hypothetical protein
RA	3,402,554	G→C	7.2%	intergenic (+35/‑117)	PP_3010 → / → PP_3011	hypothetical protein/hypothetical protein
RA	3,402,555	A→G	7.2%	intergenic (+36/‑116)	PP_3010 → / → PP_3011	hypothetical protein/hypothetical protein
RA	3,402,563	T→A	7.2%	intergenic (+44/‑108)	PP_3010 → / → PP_3011	hypothetical protein/hypothetical protein
RA	3,414,637	C→T	6.9%	A535V (GCC→GTC)	PP_3026 →	recombinase
RA	3,418,562	G→A	6.2%	intergenic (‑108/+51)	prtN ← / ← PP_3032	transcriptional regulator PrtN/DNA‑binding protein Roi‑like protein
RA	3,418,565	T→C	6.5%	intergenic (‑111/+48)	prtN ← / ← PP_3032	transcriptional regulator PrtN/DNA‑binding protein Roi‑like protein
RA	3,430,392	G→C	5.6%	S189S (TCG→TCC)	PP_3045 →	ATP‑dependent protease ClpP
RA	3,435,965	G→A	6.4%	Q278Q (CAG→CAA)	gpJ →	baseplate/tail fiber protein
RA	3,435,966	T→C	6.5%	L279L (TTG→CTG)	gpJ →	baseplate/tail fiber protein
RA	3,450,644:1	+T	5.1%	intergenic (‑15/+368)	PP_5558 ← / ← PP_3069	Xre family transcriptional regulator/outer membrane autotransporter
RA	3,450,644:2	+C	5.1%	intergenic (‑15/+368)	PP_5558 ← / ← PP_3069	Xre family transcriptional regulator/outer membrane autotransporter
RA	3,450,652	Δ1 bp	5.1%	intergenic (‑23/+360)	PP_5558 ← / ← PP_3069	Xre family transcriptional regulator/outer membrane autotransporter
RA	3,453,506	C→T	10.4%	intergenic (‑17/+96)	PP_3069 ← / ← ppiC‑I	outer membrane autotransporter/peptidyl‑prolyl cis‑trans isomerase C
RA	3,453,523	A→G	6.3%	intergenic (‑34/+79)	PP_3069 ← / ← ppiC‑I	outer membrane autotransporter/peptidyl‑prolyl cis‑trans isomerase C
RA	3,453,727	T→A	5.6%	I51F (ATT→TTT)	ppiC‑I ←	peptidyl‑prolyl cis‑trans isomerase C
RA	3,457,102	T→G	6.7%	E77A (GAG→GCG)	hbdH ←	3‑hydroxybutyrate dehydrogenase
RA	3,457,105	C→A	6.8%	R76L (CGC→CTC)	hbdH ←	3‑hydroxybutyrate dehydrogenase
RA	3,460,269	Δ1 bp	11.1%	coding (136/1446 nt)	PP_3075 ←	transcriptional regulator
RA	3,460,273:1	+A	11.2%	coding (132/1446 nt)	PP_3075 ←	transcriptional regulator
RA	3,463,581	C→T	5.2%	A274T (GCC→ACC)	PP_3078 ←	ABC transporter substrate‑binding protein
RA	3,463,587	G→C	8.6%	L272V (CTG→GTG)	PP_3078 ←	ABC transporter substrate‑binding protein
RA	3,463,590	C→G	9.1%	D271H (GAC→CAC)	PP_3078 ←	ABC transporter substrate‑binding protein
RA	3,463,593	G→C	8.5%	R270G (CGT→GGT)	PP_3078 ←	ABC transporter substrate‑binding protein
RA	3,466,098	G→C	6.0%	noncoding (105/119 nt)	PP_mr39 ←	P15 ncRNA
RA	3,466,099	A→T	5.7%	noncoding (104/119 nt)	PP_mr39 ←	P15 ncRNA
RA	3,466,100	A→T	5.7%	noncoding (103/119 nt)	PP_mr39 ←	P15 ncRNA
RA	3,466,101	G→C	5.7%	noncoding (102/119 nt)	PP_mr39 ←	P15 ncRNA
RA	3,484,044	G→C	5.6%	I641M (ATC→ATG)	PP_3091 ←	membrane protein
RA	3,489,703	G→C	5.1%	A577A (GCC→GCG)	clpV ←	protein ClpV1
RA	3,489,707	G→T	5.0%	P576Q (CCG→CAG)	clpV ←	protein ClpV1
RA	3,489,710	A→C	5.7%	L575R (CTG→CGG)	clpV ←	protein ClpV1
RA	3,489,714	G→C	5.2%	R574G (CGC→GGC)	clpV ←	protein ClpV1
RA	3,490,902	T→A	9.1%	S178C (AGC→TGC)	clpV ←	protein ClpV1
RA	3,490,910	G→C	5.0%	P175R (CCG→CGG) ‡	clpV ←	protein ClpV1
RA	3,490,911	G→C	5.0%	P175A (CCG→GCG) ‡	clpV ←	protein ClpV1
RA	3,491,271	A→C	6.4%	L55V (TTG→GTG)	clpV ←	protein ClpV1
RA	3,491,276	A→T	6.6%	L53Q (CTG→CAG)	clpV ←	protein ClpV1
RA	3,491,279	A→T	6.6%	L52Q (CTG→CAG)	clpV ←	protein ClpV1
RA	3,491,284	G→T	7.4%	H50Q (CAC→CAA)	clpV ←	protein ClpV1
RA	3,492,130	A→T	7.1%	L111Q (CTG→CAG)	PP_3096 ←	hypothetical protein
RA	3,492,133	A→T	7.1%	L110Q (CTG→CAG)	PP_3096 ←	hypothetical protein
RA	3,492,832	C→G	5.8%	G472R (GGC→CGC)	PP_3097 ←	hypothetical protein
RA	3,493,695	A→C	11.6%	L184R (CTG→CGG) ‡	PP_3097 ←	hypothetical protein
RA	3,493,696	G→T	10.2%	L184M (CTG→ATG) ‡	PP_3097 ←	hypothetical protein
RA	3,508,967	G→T	6.3%	T184T (ACG→ACT)	PP_3106 →	hypothetical protein
RA	3,514,850	T→A	6.2%	L1159M (TTG→ATG)	PP_3108 →	rhs family protein
RA	3,520,127	T→A	5.7%	intergenic (+703/‑177)	PP_5580 → / → PP_5582	hypothetical protein/hypothetical protein
RA	3,528,039	C→T	5.1%	R403C (CGC→TGC)	imuB →	DNA repair DNA linked protein
RA	3,528,609	T→A	6.1%	L128Q (CTG→CAG)	dnaEB →	error‑prone DNA polymerase
RA	3,528,612	T→A	6.1%	L129Q (CTG→CAG)	dnaEB →	error‑prone DNA polymerase
RA	3,533,408	C→T	7.2%	L15F (CTC→TTC)	atoA →	3‑oxoacid CoA‑transferase subunit A
RA	3,533,413	A→G	7.0%	E16E (GAA→GAG)	atoA →	3‑oxoacid CoA‑transferase subunit A
RA	3,541,345:1	+T	7.1%	coding (415/807 nt)	PP_3128 →	exopolysaccharide biosynthesis/transport protein
RA	3,541,352	Δ1 bp	6.0%	coding (422/807 nt)	PP_3128 →	exopolysaccharide biosynthesis/transport protein
RA	3,542,361	A→G	7.4%	Y135Y (TAT→TAC)	galE ←	UDP‑glucose 4‑epimerase
RA	3,542,364	C→T	8.5%	P134P (CCG→CCA)	galE ←	UDP‑glucose 4‑epimerase
RA	3,551,117	C→T	7.3%	Q76* (CAG→TAG)	PP_3135 →	glycosyl transferase
RA	3,551,261	G→C	8.5%	D124H (GAT→CAT)	PP_3135 →	glycosyl transferase
RA	3,551,264	G→C	7.5%	G125R (GGC→CGC)	PP_3135 →	glycosyl transferase
RA	3,553,216	T→A	5.5%	L277Q (CTG→CAG)	PP_3137 →	group 2 family glycosyl transferase
RA	3,578,471	T→A	7.3%	intergenic (+105/‑219)	PP_3158 → / → PP_5589	hypothetical protein/rhs repeat‑associated core domain‑containing protein
RA	3,578,472	T→A	7.3%	intergenic (+106/‑218)	PP_3158 → / → PP_5589	hypothetical protein/rhs repeat‑associated core domain‑containing protein
RA	3,578,473	T→A	7.3%	intergenic (+107/‑217)	PP_3158 → / → PP_5589	hypothetical protein/rhs repeat‑associated core domain‑containing protein
RA	3,578,474	T→A	7.3%	intergenic (+108/‑216)	PP_3158 → / → PP_5589	hypothetical protein/rhs repeat‑associated core domain‑containing protein
RA	3,580,893	T→A	5.6%	intergenic (+28/‑55)	benR → / → PP_3160	BenABC operon transcriptional activator/hypothetical protein
RA	3,584,942	A→C	5.6%	intergenic (+46/‑89)	benC → / → benD	benzoate 1,2‑dioxygenase electron transfer component/1,6‑dihydroxycyclohexa‑2,4‑diene‑1‑carboxylate dehydrogenase
RA	3,587,752	T→G	5.2%	V182G (GTT→GGT)	catA‑II →	catechol 1,2‑dioxygenase
RA	3,587,755	C→A	5.4%	T183N (ACC→AAC)	catA‑II →	catechol 1,2‑dioxygenase
RA	3,590,368	G→C	5.1%	R282R (CGG→CGC)	nicP‑I →	porin‑like protein
RA	3,590,373	G→C	6.0%	G284A (GGC→GCC)	nicP‑I →	porin‑like protein
RA	3,591,619	T→A	8.6%	L258M (TTG→ATG) ‡	PP_3169 →	membrane protein
RA	3,591,620	T→A	8.6%	L258* (TTG→TAG) ‡	PP_3169 →	membrane protein
RA	3,593,801	G→A	5.3%	R265H (CGC→CAC)	PP_3171 →	hypothetical protein
RA	3,593,804	C→G	5.8%	A266G (GCC→GGC)	PP_3171 →	hypothetical protein
RA	3,610,309:1	+C	6.1%	intergenic (‑34/+22)	PP_3183 ← / ← mcoA	SCO1/SenC family protein/Mn(II) copper oxidase A
RA	3,610,313	Δ1 bp	6.2%	intergenic (‑38/+18)	PP_3183 ← / ← mcoA	SCO1/SenC family protein/Mn(II) copper oxidase A
RA	3,612,162	A→T	6.8%	I522N (ATT→AAT)	mcoA ←	Mn(II) copper oxidase A
RA	3,614,219	T→A	5.3%	W17R (TGG→AGG)	pet →	protein Pet18
RA	3,615,435	C→G	5.4%	S205R (AGC→AGG)	PP_3186 →	transcriptional regulator
RA	3,624,187	G→C	17.2%	intergenic (‑92/+81)	PP_3194 ← / ← PP_3195	hypothetical protein/hypothetical protein
RA	3,625,587	Δ1 bp	5.4%	intergenic (‑57/+20)	PP_3195 ← / ← PP_3196	hypothetical protein/nodulation protein d1
RA	3,628,125	C→G	8.7%	intergenic (+11/‑129)	PP_3198 → / → PP_3199	2Fe‑2S ferredoxin/monooxygenase
RA	3,630,695	T→A	6.2%	W425R (TGG→AGG)	PP_3200 →	hypothetical protein
RA	3,630,700	T→G	6.4%	L426L (CTT→CTG)	PP_3200 →	hypothetical protein
RA	3,630,703	C→A	6.3%	A427A (GCC→GCA)	PP_3200 →	hypothetical protein
RA	3,630,708	T→A	6.9%	L429Q (CTG→CAG)	PP_3200 →	hypothetical protein
RA	3,636,446	A→T	5.8%	I111F (ATC→TTC)	PP_3203 →	MFS transporter
RA	3,637,784	G→T	7.7%	E107D (GAG→GAT)	PP_3204 →	hypothetical protein
RA	3,637,785	A→C	6.8%	I108L (ATC→CTC)	PP_3204 →	hypothetical protein
RA	3,638,699	T→G	7.7%	L218V (TTG→GTG)	PP_3205 →	fumarylacetoacetate hydrolase family protein
RA	3,638,703	C→A	6.6%	P219Q (CCG→CAG)	PP_3205 →	fumarylacetoacetate hydrolase family protein
RA	3,638,706	T→G	7.2%	L220R (CTG→CGG)	PP_3205 →	fumarylacetoacetate hydrolase family protein
RA	3,638,710	C→A	7.1%	H221Q (CAC→CAA)	PP_3205 →	fumarylacetoacetate hydrolase family protein
RA	3,638,751	G→C	7.2%	G235A (GGC→GCC)	PP_3205 →	fumarylacetoacetate hydrolase family protein
RA	3,644,991	C→T	5.4%	intergenic (‑43/+23)	PP_3211 ← / ← PP_3212	ABC transporter ATP‑binding protein/Rieske 2Fe‑2S family protein
RA	3,644,994	A→G	5.4%	intergenic (‑46/+20)	PP_3211 ← / ← PP_3212	ABC transporter ATP‑binding protein/Rieske 2Fe‑2S family protein
RA	3,645,945	A→T	5.6%	L32Q (CTG→CAG)	PP_3212 ←	Rieske 2Fe‑2S family protein
RA	3,645,948	A→T	5.5%	L31Q (CTG→CAG)	PP_3212 ←	Rieske 2Fe‑2S family protein
RA	3,651,399	C→T	5.6%	P80S (CCG→TCG)	PP_3217 →	aliphatic sulfonate‑binding protein
RA	3,691,282	G→T	5.5%	L194I (CTC→ATC)	PP_3257 ←	putative Methyltransferase
RA	3,691,283	A→C	5.6%	D193E (GAT→GAG)	PP_3257 ←	putative Methyltransferase
RA	3,703,316:1	+C	5.6%	coding (97/270 nt)	PP_5596 →	hypothetical protein
RA	3,709,695	T→C	6.7%	S249G (AGC→GGC)	paaE ←	ring 1,2‑phenylacetyl‑CoA epoxidase reductase subunit
RA	3,711,943	G→A	9.4%	A27A (GCC→GCT)	paaB ←	ring 1,2‑phenylacetyl‑CoA epoxidase regulatory subunit
RA	3,711,954	T→C	7.4%	S24G (AGC→GGC)	paaB ←	ring 1,2‑phenylacetyl‑CoA epoxidase regulatory subunit
RA	3,715,401	A→T	8.1%	D166E (GAT→GAA)	paaJ ←	3‑oxoadipyl‑CoA/3‑oxo‑5,6‑dehydrosuberyl‑CoA thiolase
RA	3,717,790:1	+G	5.4%	coding (52/1518 nt)	paaH ←	3‑hydroxyacyl‑CoA dehydrogenase PaaC
RA	3,726,458	T→G	6.8%	F356L (TTT→TTG)	PP_3291 →	metallo‑beta‑lactamase family protein
RA	3,726,459	C→A	6.5%	Q357K (CAA→AAA)	PP_3291 →	metallo‑beta‑lactamase family protein
RA	3,731,889	A→G	5.8%	R465R (CGT→CGC)	PP_3299 ←	lipoprotein
RA	3,731,892	C→T	5.7%	A464A (GCG→GCA)	PP_3299 ←	lipoprotein
RA	3,740,252	C→A	6.7%	L218M (CTG→ATG) ‡	PP_3304 →	Bcr/CflA family multidrug resistance transporter
RA	3,740,253	T→G	6.7%	L218R (CTG→CGG) ‡	PP_3304 →	Bcr/CflA family multidrug resistance transporter
RA	3,742,779	G→A	8.5%	K12K (AAG→AAA)	PP_3307 →	hypothetical protein
RA	3,755,655	C→T	8.2%	F351F (TTC→TTT)	PP_3319 →	GGDEF domain‑containing sensory box protein
RA	3,755,656	A→G	8.7%	K352E (AAA→GAA)	PP_3319 →	GGDEF domain‑containing sensory box protein
RA	3,762,985	A→T	15.8%	N62I (AAC→ATC)	PP_3326 →	hypothetical protein
RA	3,762,990	A→T	16.4%	I64F (ATC→TTC)	PP_3326 →	hypothetical protein
RA	3,763,545	A→G	5.0%	intergenic (+22/+1653)	PP_3326 → / ← PP_3328	hypothetical protein/ring‑cleaving dioxygenase
RA	3,763,547	G→C	5.0%	intergenic (+24/+1651)	PP_3326 → / ← PP_3328	hypothetical protein/ring‑cleaving dioxygenase
RA	3,763,549	C→T	5.0%	intergenic (+26/+1649)	PP_3326 → / ← PP_3328	hypothetical protein/ring‑cleaving dioxygenase
RA	3,774,386	C→T	6.7%	intergenic (+38/+28)	PP_5743 → / ← PP_3335	TonB‑dependent receptor protein/hypothetical protein
RA	3,774,395	A→G	6.3%	intergenic (+47/+19)	PP_5743 → / ← PP_3335	TonB‑dependent receptor protein/hypothetical protein
RA	3,788,444	G→C	5.4%	R78R (CGC→CGG)	PP_3350 ←	hypothetical protein
RA	3,790,734	C→G	5.5%	G45G (GGC→GGG)	PP_3353 →	sulfatase‑modifying protein
RA	3,791,148	C→T	5.6%	G183G (GGC→GGT)	PP_3353 →	sulfatase‑modifying protein
RA	3,791,153	A→G	5.2%	E185G (GAA→GGA) ‡	PP_3353 →	sulfatase‑modifying protein
RA	3,791,154	A→C	5.1%	E185D (GAA→GAC) ‡	PP_3353 →	sulfatase‑modifying protein
RA	3,791,448	C→G	6.4%	G283G (GGC→GGG)	PP_3353 →	sulfatase‑modifying protein
RA	3,791,453	C→G	6.4%	A285G (GCC→GGC)	PP_3353 →	sulfatase‑modifying protein
RA	3,793,935	A→T	11.3%	L211M (TTG→ATG)	PP_3355 ←	beta‑ketothiolase
RA	3,793,940	A→T	11.3%	I209N (ATT→AAT)	PP_3355 ←	beta‑ketothiolase
RA	3,794,737	G→C	5.6%	A587G (GCC→GGC)	fcs ←	feruloyl‑CoA‑synthetase
RA	3,797,890	A→T	6.4%	A49A (GCT→GCA)	vdh ←	vanillin dehydrogenase
RA	3,797,893	A→T	6.3%	A48A (GCT→GCA)	vdh ←	vanillin dehydrogenase
RA	3,797,898	C→G	6.1%	V47L (GTG→CTG)	vdh ←	vanillin dehydrogenase
RA	3,799,988	A→C	8.4%	R94R (AGG→CGG) ‡	PP_3360 →	membrane protein
RA	3,799,989	G→T	8.7%	R94M (AGG→ATG) ‡	PP_3360 →	membrane protein
RA	3,804,064	C→G	6.9%	intergenic (‑105/‑39)	PP_3361 ← / → PP_3362	aminotransferase/AsnC family transcriptional regulator
RA	3,812,702	A→G	13.9%	D328G (GAC→GGC)	PP_3368 →	MFS transporter
RA	3,812,705	T→A	14.0%	I329N (ATT→AAT)	PP_3368 →	MFS transporter
RA	3,812,708	C→T	14.2%	A330V (GCC→GTC)	PP_3368 →	MFS transporter
RA	3,848,513	A→T	5.5%	P78P (CCA→CCT)	PP_3397 →	hypothetical protein
RA	3,850,430	C→T	5.9%	T717T (ACC→ACT)	PP_3397 →	hypothetical protein
RA	3,851,001	A→C	11.3%	N147H (AAT→CAT)	PP_3398 →	curli fiber surface‑exposed nucleator CsgB
RA	3,851,004	G→T	10.8%	G148C (GGC→TGC)	PP_3398 →	curli fiber surface‑exposed nucleator CsgB
RA	3,853,162	T→A	16.5%	I169N (ATT→AAT)	alkB →	alpha‑ketoglutarate‑ and Fe(II)‑dependent dioxygenase
RA	3,853,822	A→G	7.0%	intergenic (+61/+21)	PP_3401 → / ← PP_3402	hypothetical protein/hypothetical protein
RA	3,863,883	C→T	9.6%	P921L (CCA→CTA) ‡	PP_3413 →	two‑component system sensor histidine kinase/response regulator
RA	3,863,884	A→G	9.4%	P921P (CCA→CCG) ‡	PP_3413 →	two‑component system sensor histidine kinase/response regulator
RA	3,865,909	C→T	15.0%	S338N (AGC→AAC)	PP_3415 ←	LacI family transcriptional regulator
RA	3,866,969	G→A	9.0%	intergenic (‑48/‑159)	PP_3415 ← / → gnuK	LacI family transcriptional regulator/D‑gluconate kinase
RA	3,868,191:1	+A	5.7%	coding (413/1353 nt)	gntT →	D‑gluconate transporter
RA	3,868,196	Δ1 bp	5.6%	coding (418/1353 nt)	gntT →	D‑gluconate transporter
RA	3,869,902	T→G	5.2%	E354A (GAG→GCG) ‡	PP_3419 ←	sigma‑54 dependent transcriptional regulator/response regulator
RA	3,869,903	C→A	5.0%	E354* (GAG→TAG) ‡	PP_3419 ←	sigma‑54 dependent transcriptional regulator/response regulator
RA	3,876,562	Δ1 bp	6.8%	coding (1010/1212 nt)	xcpS →	type II secretion pathway protein XcpS
RA	3,876,566:1	+A	6.7%	coding (1014/1212 nt)	xcpS →	type II secretion pathway protein XcpS
RA	3,882,278	Δ1 bp	8.2%	coding (893/1416 nt)	oprN →	multidrug RND transporter outer membrane protein OprN
RA	3,882,857	A→G	9.6%	intergenic (+56/‑169)	oprN → / → PP_3428	multidrug RND transporter outer membrane protein OprN/TPR repeat‑containing protein
RA	3,882,868	C→T	7.8%	intergenic (+67/‑158)	oprN → / → PP_3428	multidrug RND transporter outer membrane protein OprN/TPR repeat‑containing protein
RA	3,883,615	C→G	5.1%	A197G (GCC→GGC) ‡	PP_3428 →	TPR repeat‑containing protein
RA	3,883,616	C→G	5.2%	A197A (GCC→GCG) ‡	PP_3428 →	TPR repeat‑containing protein
RA	3,884,681	A→G	7.8%	Q174Q (CAA→CAG)	PP_3429 →	two component system response regulator/sensor histidine kinase
RA	3,884,682	C→T	7.8%	L175L (CTG→TTG)	PP_3429 →	two component system response regulator/sensor histidine kinase
RA	3,896,127	T→G	7.7%	Q221P (CAG→CCG)	PP_3439 ←	AraC family transcriptional regulator
RA	3,896,134	A→G	7.9%	L219L (TTG→CTG)	PP_3439 ←	AraC family transcriptional regulator
RA	3,896,135	C→T	7.7%	Q218Q (CAG→CAA)	PP_3439 ←	AraC family transcriptional regulator
RA	3,896,142	C→A	8.9%	R216L (CGG→CTG)	PP_3439 ←	AraC family transcriptional regulator
RA	3,908,447	C→T	6.2%	L118L (CTG→TTG)	PP_3450 →	TPR repeat‑containing protein
RA	3,908,460	A→G	6.8%	N122S (AAC→AGC)	PP_3450 →	TPR repeat‑containing protein
RA	3,912,137	T→C	7.6%	W147R (TGG→CGG) ‡	PP_3452 →	GGDEF domain‑containing protein
RA	3,912,138	G→A	7.6%	W147* (TGG→TAG) ‡	PP_3452 →	GGDEF domain‑containing protein
RA	3,912,174	A→G	7.7%	E159G (GAG→GGG)	PP_3452 →	GGDEF domain‑containing protein
RA	3,912,177	C→T	8.7%	P160L (CCC→CTC)	PP_3452 →	GGDEF domain‑containing protein
RA	3,920,669	G→C	6.7%	R381G (CGG→GGG)	acs ←	acyl‑CoA synthetase
RA	3,920,670	G→C	6.7%	P380P (CCC→CCG)	acs ←	acyl‑CoA synthetase
RA	3,924,743	C→T	5.9%	G39S (GGC→AGC)	peaB ←	quinohemoprotein amine dehydrogenase modification protein
RA	3,926,153	Δ1 bp	7.9%	coding (382/1629 nt)	peaA ←	quinohemoprotein amine dehydrogenase subunit alpha
RA	3,926,157:1	+T	8.0%	coding (378/1629 nt)	peaA ←	quinohemoprotein amine dehydrogenase subunit alpha
RA	3,938,979	Δ1 bp	5.2%	intergenic (+139/+43)	PP_3471 → / ← csgG	hypothetical protein/curli production assembly/transport protein CsgG
RA	3,938,981	G→C	5.4%	intergenic (+141/+41)	PP_3471 → / ← csgG	hypothetical protein/curli production assembly/transport protein CsgG
RA	3,938,983	G→T	5.4%	intergenic (+143/+39)	PP_3471 → / ← csgG	hypothetical protein/curli production assembly/transport protein CsgG
RA	3,938,984:1	+A	5.5%	intergenic (+144/+38)	PP_3471 → / ← csgG	hypothetical protein/curli production assembly/transport protein CsgG
RA	3,941,121:1	+A	5.6%	coding (123/531 nt)	PP_3475 ←	type II secretion system pseudopilin PulG‑like signal peptide protein
RA	3,941,126	Δ1 bp	5.4%	coding (118/531 nt)	PP_3475 ←	type II secretion system pseudopilin PulG‑like signal peptide protein
RA	3,943,063	T→A	6.1%	K292* (AAG→TAG)	PP_3478 ←	secretion protein
RA	3,960,565	A→T	10.0%	intergenic (‑137/‑192)	mnxG ← / → PP_3491	manganese‑oxidizing multicopper oxidase/enoly‑coenzyme A hydratase/isomerase family protein
RA	3,966,806	C→A	7.4%	L319M (CTG→ATG) ‡	ydcP →	peptidase
RA	3,966,807	T→G	7.4%	L319R (CTG→CGG) ‡	ydcP →	peptidase
RA	3,973,159	A→G	5.6%	intergenic (+153/+32)	PP_3502 → / ← PP_3503	transposase/sigma‑54 dependent transcriptional regulator
RA	3,981,210	G→A	5.1%	A179V (GCC→GTC)	cobW ←	adenosylcobalamin biosynthesis protein CobW
RA	3,982,021	A→T	7.2%	noncoding (28/207 nt)	PP_mr43 ←	Cobalamin regulatory region
RA	3,982,879	G→T	13.3%	G118G (GGG→GGT)	PP_3510 →	hypothetical protein
RA	3,982,882	T→A	10.5%	H119Q (CAT→CAA)	PP_3510 →	hypothetical protein
RA	3,982,885	A→C	12.4%	*120C (TGA→TGC)	PP_3510 →	hypothetical protein
RA	3,986,007	C→T	5.4%	D80D (GAC→GAT)	oplB →	5‑oxoprolinase B
RA	3,986,009	A→T	5.4%	D81V (GAC→GTC)	oplB →	5‑oxoprolinase B
RA	3,986,011	A→G	5.0%	I82V (ATC→GTC)	oplB →	5‑oxoprolinase B
RA	3,989,552	C→G	5.1%	P676A (CCC→GCC)	oplA →	5‑oxoprolinase A
RA	3,989,557	C→G	6.0%	G677G (GGC→GGG)	oplA →	5‑oxoprolinase A
RA	3,995,396	A→T	8.5%	intergenic (‑117/+33)	PP_3521 ← / ← PP_3522	membrane protein/hypothetical protein
RA	3,995,397	A→T	8.4%	intergenic (‑118/+32)	PP_3521 ← / ← PP_3522	membrane protein/hypothetical protein
RA	4,000,179	C→T	6.9%	Q274* (CAG→TAG) ‡	PP_3528 →	ABC transporter substrate‑binding protein
RA	4,000,180	A→G	6.8%	Q274R (CAG→CGG) ‡	PP_3528 →	ABC transporter substrate‑binding protein
RA	4,002,532	G→A	8.8%	V224V (GTG→GTA)	allE →	S‑ureidoglycine aminohydrolase
RA	4,002,533	T→C	8.9%	Y225H (TAC→CAC)	allE →	S‑ureidoglycine aminohydrolase
RA	4,002,726	A→G	9.2%	intergenic (+29/‑61)	allE → / → PP_3531	S‑ureidoglycine aminohydrolase/hypothetical protein
RA	4,002,727	C→G	8.5%	intergenic (+30/‑60)	allE → / → PP_3531	S‑ureidoglycine aminohydrolase/hypothetical protein
RA	4,002,728	C→T	8.7%	intergenic (+31/‑59)	allE → / → PP_3531	S‑ureidoglycine aminohydrolase/hypothetical protein
RA	4,002,971	T→C	6.7%	L62P (CTG→CCG)	PP_3531 →	hypothetical protein
RA	4,002,977	A→T	9.2%	D64V (GAT→GTT)	PP_3531 →	hypothetical protein
RA	4,002,980	A→T	9.2%	N65I (AAC→ATC)	PP_3531 →	hypothetical protein
RA	4,005,361	T→A	8.2%	R242W (AGG→TGG)	PP_3534 ←	LysR family transcriptional regulator
RA	4,008,799	G→T	6.9%	A139D (GCT→GAT)	PP_3536 ←	hypothetical protein
RA	4,008,802	T→A	6.0%	D138V (GAC→GTC)	PP_3536 ←	hypothetical protein
RA	4,008,805	A→C	6.2%	I137S (ATC→AGC)	PP_3536 ←	hypothetical protein
RA	4,018,109	A→T	5.2%	Q167L (CAG→CTG)	PP_3545 →	two‑component system sensor histidine kinase/response regulator
RA	4,021,409	C→G	8.0%	*314S (TGA→TCA)	PP_3547 ←	NAD(P)‑binding oxidoreductase
RA	4,022,850	C→G	6.4%	intergenic (‑501/+167)	PP_3547 ← / ← emrB	NAD(P)‑binding oxidoreductase/multidrug transporter permease
RA	4,022,851	C→G	6.4%	intergenic (‑502/+166)	PP_3547 ← / ← emrB	NAD(P)‑binding oxidoreductase/multidrug transporter permease
RA	4,025,161	G→C	9.0%	S194S (TCC→TCG)	emrA ←	multidrug transporter membrane fusion protein
RA	4,025,168	A→G	9.6%	V192A (GTG→GCG) ‡	emrA ←	multidrug transporter membrane fusion protein
RA	4,025,169	C→T	9.7%	V192M (GTG→ATG) ‡	emrA ←	multidrug transporter membrane fusion protein
RA	4,038,942	T→C	5.2%	S233P (TCG→CCG)	PP_3559 →	glycine betaine ABC transporter permease
RA	4,038,947	G→C	5.3%	M234I (ATG→ATC)	PP_3559 →	glycine betaine ABC transporter permease
RA	4,038,952	G→A	5.1%	G236D (GGC→GAC)	PP_3559 →	glycine betaine ABC transporter permease
RA	4,042,365	C→A	8.4%	L137I (CTC→ATC) ‡	PP_3563 →	hypothetical protein
RA	4,042,366	T→G	8.7%	L137R (CTC→CGC) ‡	PP_3563 →	hypothetical protein
RA	4,044,721	C→G	8.8%	G344A (GGG→GCG) ‡	PP_3566 ←	MFS transporter
RA	4,044,722	C→G	8.4%	G344R (GGG→CGG) ‡	PP_3566 ←	MFS transporter
RA	4,045,978	C→A	5.1%	Q262H (CAG→CAT) ‡	PP_3567 ←	LysR family transcriptional regulator
RA	4,045,979	T→G	5.2%	Q262P (CAG→CCG) ‡	PP_3567 ←	LysR family transcriptional regulator
RA	4,049,951	A→G	28.7%	intergenic (+40/‑61)	quiA → / → oprB‑III	quinate dehydrogenase/carbohydrate‑selective porin
RA	4,049,954	C→G	30.4%	intergenic (+43/‑58)	quiA → / → oprB‑III	quinate dehydrogenase/carbohydrate‑selective porin
RA	4,049,957	C→T	30.5%	intergenic (+46/‑55)	quiA → / → oprB‑III	quinate dehydrogenase/carbohydrate‑selective porin
RA	4,050,054	C→A	9.1%	L15M (CTG→ATG) ‡	oprB‑III →	carbohydrate‑selective porin
RA	4,050,055	T→G	9.1%	L15R (CTG→CGG) ‡	oprB‑III →	carbohydrate‑selective porin
RA	4,051,296	C→G	7.7%	intergenic (+16/+27)	oprB‑III → / ← PP_3571	carbohydrate‑selective porin/acetylornithine deacetylase
RA	4,061,434	C→A	5.8%	L107M (CTG→ATG) ‡	PP_3579 →	membrane protein
RA	4,061,435	T→G	5.2%	L107R (CTG→CGG) ‡	PP_3579 →	membrane protein
RA	4,073,653	G→A	5.9%	intergenic (‑147/+477)	mdtA ← / ← PP_3586	multidrug transporter membrane fusion protein/transposase
RA	4,073,654	T→C	5.9%	intergenic (‑148/+476)	mdtA ← / ← PP_3586	multidrug transporter membrane fusion protein/transposase
RA	4,078,523	A→T	5.8%	Y240N (TAC→AAC)	sdaC ←	serine:H+ symport permease
RA	4,078,665	G→A	5.0%	T192T (ACC→ACT)	sdaC ←	serine:H+ symport permease
RA	4,079,214	T→A	7.1%	E9D (GAA→GAT) ‡	sdaC ←	serine:H+ symport permease
RA	4,079,215	T→A	7.1%	E9V (GAA→GTA) ‡	sdaC ←	serine:H+ symport permease
RA	4,080,964	A→T	6.6%	intergenic (‑144/+19)	amaC ← / ← dpkA	D‑lysine aminotransferase/delta 1‑piperideine‑2‑carboxylate reductase
RA	4,090,100	C→G	7.0%	S36C (TCC→TGC) ‡	gudP →	glucarate transporter
RA	4,090,101	C→G	6.6%	S36S (TCC→TCG) ‡	gudP →	glucarate transporter
RA	4,099,210	C→T	5.0%	W284* (TGG→TGA)	PP_3607 ←	membrane protein
RA	4,125,345	A→T	5.7%	intergenic (+30/+51)	PP_3628 → / ← PP_3629	choline/carnitine/betaine transporter family protein/hypothetical protein
RA	4,131,155	T→C	7.2%	intergenic (+23/+89)	PP_3634 → / ← PP_3635	GNAT family acetyltransferase/sulfonate ABC transporter permease
RA	4,131,162	G→T	5.3%	intergenic (+30/+82)	PP_3634 → / ← PP_3635	GNAT family acetyltransferase/sulfonate ABC transporter permease
RA	4,138,324	T→C	6.9%	intergenic (‑95/‑222)	PP_3641 ← / → PP_3643	cytosine/purine/uracil/thiamine/allantoin permease family protein/oxidoreductase
RA	4,141,212	T→A	7.0%	L44Q (CTG→CAG)	PP_3645 →	L‑proline amide hydrolase
RA	4,143,926	T→A	15.5%	intergenic (+35/‑88)	PP_3647 → / → PP_3648	oxidoreductase/carboxymuconolactone decarboxylase family protein
RA	4,143,927	T→A	15.2%	intergenic (+36/‑87)	PP_3647 → / → PP_3648	oxidoreductase/carboxymuconolactone decarboxylase family protein
RA	4,150,067	C→T	8.9%	intergenic (+22/‑375)	PP_3654 → / → PP_3655	leucine‑responsive regulatory protein/cytosine/purine/uracil/thiamine/allantoin permease family protein
RA	4,155,334	C→T	7.9%	G68G (GGG→GGA) ‡	PP_3658 ←	aromatic compound MFS transporter
RA	4,155,336	C→G	7.9%	G68R (GGG→CGG) ‡	PP_3658 ←	aromatic compound MFS transporter
RA	4,155,338	A→G	7.7%	F67S (TTC→TCC)	PP_3658 ←	aromatic compound MFS transporter
RA	4,162,143	T→C	9.6%	intergenic (‑43/+34)	PP_3663 ← / ← pssA	GGDEF domain‑containing protein/CDP‑diacylglycerol‑‑serine O‑phosphatidyltransferase
RA	4,162,147	T→A	8.9%	intergenic (‑47/+30)	PP_3663 ← / ← pssA	GGDEF domain‑containing protein/CDP‑diacylglycerol‑‑serine O‑phosphatidyltransferase
RA	4,162,148	T→A	8.7%	intergenic (‑48/+29)	PP_3663 ← / ← pssA	GGDEF domain‑containing protein/CDP‑diacylglycerol‑‑serine O‑phosphatidyltransferase
RA	4,162,152	G→A	8.9%	intergenic (‑52/+25)	PP_3663 ← / ← pssA	GGDEF domain‑containing protein/CDP‑diacylglycerol‑‑serine O‑phosphatidyltransferase
RA	4,162,162	T→C	5.6%	intergenic (‑62/+15)	PP_3663 ← / ← pssA	GGDEF domain‑containing protein/CDP‑diacylglycerol‑‑serine O‑phosphatidyltransferase
RA	4,165,671	C→T	11.6%	G159R (GGG→AGG)	PP_3666 ←	MHS family metabolite MFS transporter
RA	4,165,672	A→G	11.4%	P158P (CCT→CCC)	PP_3666 ←	MHS family metabolite MFS transporter
RA	4,170,224	T→G	7.0%	intergenic (‑288/‑99)	katG ← / → PP_3669	catalase‑peroxidase/LysR family transcriptional regulator
RA	4,188,015:1	+A	6.8%	intergenic (+76/‑134)	PP_3683 → / → PP_3684	hypothetical protein/hypothetical protein
RA	4,188,018	Δ1 bp	7.3%	intergenic (+79/‑131)	PP_3683 → / → PP_3684	hypothetical protein/hypothetical protein
RA	4,221,231	G→T	11.0%	intergenic (+46/+216)	PP_3699 → / ← PP_3700	hypothetical protein/chromosome partitioning ATPase
RA	4,221,233	A→T	9.2%	intergenic (+48/+214)	PP_3699 → / ← PP_3700	hypothetical protein/chromosome partitioning ATPase
RA	4,221,235	A→C	9.1%	intergenic (+50/+212)	PP_3699 → / ← PP_3700	hypothetical protein/chromosome partitioning ATPase
RA	4,237,680	T→G	6.8%	E205A (GAG→GCG) ‡	catB ←	muconate cycloisomerase 1
RA	4,237,681	C→A	6.7%	E205* (GAG→TAG) ‡	catB ←	muconate cycloisomerase 1
RA	4,240,280	C→T	6.1%	P18P (CCG→CCA)	PP_3717 ←	LuxR family transcriptional regulator
RA	4,242,834	C→T	9.2%	G16D (GGC→GAC)	PP_3719 ←	putrescine‑binding protein
RA	4,242,836	A→T	9.0%	S15S (TCT→TCA) ‡	PP_3719 ←	putrescine‑binding protein
RA	4,242,838	A→G	9.4%	S15P (TCT→CCT) ‡	PP_3719 ←	putrescine‑binding protein
RA	4,244,402	G→C	7.1%	S221R (AGC→AGG)	aruH ←	arginine‑‑pyruvate transaminase AruH
RA	4,246,229	C→G	10.3%	M30I (ATG→ATC)	alr ←	alanine racemase
RA	4,246,232	C→G	10.1%	S29S (TCG→TCC)	alr ←	alanine racemase
RA	4,256,382	A→T	6.9%	L190Q (CTG→CAG)	PP_3729 ←	amino acid‑binding protein‑like protein
RA	4,256,384	G→C	6.8%	H189Q (CAC→CAG)	PP_3729 ←	amino acid‑binding protein‑like protein
RA	4,264,956	T→A	6.3%	L42Q (CTG→CAG)	vanB →	vanillate O‑demethylase oxidoreductase
RA	4,264,962	A→T	6.4%	D44V (GAC→GTC)	vanB →	vanillate O‑demethylase oxidoreductase
RA	4,264,968	T→A	6.4%	L46Q (CTG→CAG)	vanB →	vanillate O‑demethylase oxidoreductase
RA	4,271,854	T→C	9.5%	T206A (ACG→GCG)	PP_3742 ←	glutathione S‑transferase family protein
RA	4,271,857	G→A	9.9%	R205C (CGC→TGC)	PP_3742 ←	glutathione S‑transferase family protein
RA	4,274,674	G→T	7.2%	S196I (AGC→ATC)	glcD →	glycolate oxidase FAD‑linked subunit
RA	4,274,677	A→C	7.1%	D197A (GAT→GCT)	glcD →	glycolate oxidase FAD‑linked subunit
RA	4,279,852	C→A	9.0%	A336A (GCC→GCA)	PP_3750 →	GntR family transcriptional regulator
RA	4,279,857	T→G	8.8%	L338R (CTG→CGG)	PP_3750 →	GntR family transcriptional regulator
RA	4,280,489	C→G	6.2%	A327P (GCG→CCG)	PP_3751 ←	cyanate transporter
RA	4,289,064:1	+C	11.4%	coding (103/822 nt)	PP_3760 ←	methyltransferase
RA	4,289,069	Δ1 bp	10.3%	coding (98/822 nt)	PP_3760 ←	methyltransferase
RA	4,297,638	G→A	7.6%	R154C (CGC→TGC)	PP_3768 ←	shikimate 5‑dehydrogenase
RA	4,297,639	T→C	7.7%	A153A (GCA→GCG)	PP_3768 ←	shikimate 5‑dehydrogenase
RA	4,298,936	T→A	5.7%	intergenic (+47/+44)	PP_3770 → / ← PP_3771	hypothetical protein/hypothetical protein
RA	4,301,102	A→G	6.9%	T75A (ACG→GCG)	PP_3774 →	hypothetical protein
RA	4,301,115	C→T	6.4%	A79V (GCC→GTC)	PP_3774 →	hypothetical protein
RA	4,301,619	G→C	9.6%	intergenic (+65/‑1235)	PP_3774 → / → PP_5627	hypothetical protein/hypothetical protein
RA	4,301,621	G→C	9.1%	intergenic (+67/‑1233)	PP_3774 → / → PP_5627	hypothetical protein/hypothetical protein
RA	4,301,623	G→C	9.4%	intergenic (+69/‑1231)	PP_3774 → / → PP_5627	hypothetical protein/hypothetical protein
RA	4,314,775	Δ1 bp	10.9%	coding (933/1209 nt)	aspC →	aminotransferase
RA	4,314,779:1	+T	10.9%	coding (937/1209 nt)	aspC →	aminotransferase
RA	4,316,066	A→C	9.3%	A35A (GCA→GCC)	PP_3788 →	non‑ribosomal peptide synthetase
RA	4,316,069	G→T	9.8%	A36A (GCG→GCT)	PP_3788 →	non‑ribosomal peptide synthetase
RA	4,327,296	A→T	6.9%	N74Y (AAC→TAC) ‡	PP_3797 →	membrane protein
RA	4,327,297	A→T	7.1%	N74I (AAC→ATC) ‡	PP_3797 →	membrane protein
RA	4,334,374	C→T	5.7%	A149T (GCG→ACG)	PP_3806 ←	isochorismatase family hydrolase
RA	4,334,379	G→C	5.5%	A147G (GCC→GGC)	PP_3806 ←	isochorismatase family hydrolase
RA	4,334,384	A→G	6.2%	R145R (CGT→CGC)	PP_3806 ←	isochorismatase family hydrolase
RA	4,338,437	T→A	7.1%	intergenic (+13/+129)	PP_3812 → / ← PP_5632	lipase/allo‑isoleucine metabolism protein
RA	4,338,447	T→C	14.1%	intergenic (+23/+119)	PP_3812 → / ← PP_5632	lipase/allo‑isoleucine metabolism protein
RA	4,338,448	G→A	14.4%	intergenic (+24/+118)	PP_3812 → / ← PP_5632	lipase/allo‑isoleucine metabolism protein
RA	4,338,458	T→A	10.3%	intergenic (+34/+108)	PP_3812 → / ← PP_5632	lipase/allo‑isoleucine metabolism protein
RA	4,338,537	A→T	12.5%	intergenic (+113/+29)	PP_3812 → / ← PP_5632	lipase/allo‑isoleucine metabolism protein
RA	4,338,538	A→T	12.4%	intergenic (+114/+28)	PP_3812 → / ← PP_5632	lipase/allo‑isoleucine metabolism protein
RA	4,340,120	G→C	8.7%	intergenic (+61/‑270)	ribAB‑II → / → PP_3814	3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/polyamine ABC transportersubstrate‑binding protein
RA	4,340,125	A→G	8.5%	intergenic (+66/‑265)	ribAB‑II → / → PP_3814	3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/polyamine ABC transportersubstrate‑binding protein
RA	4,340,127	A→G	8.9%	intergenic (+68/‑263)	ribAB‑II → / → PP_3814	3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/polyamine ABC transportersubstrate‑binding protein
RA	4,340,128	C→T	8.8%	intergenic (+69/‑262)	ribAB‑II → / → PP_3814	3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/polyamine ABC transportersubstrate‑binding protein
RA	4,348,749	A→G	49.6%	intergenic (‑70/+404)	PP_3820 ← / ← galU	group II intron‑encoding maturase/UTP‑glucose‑1‑phosphate uridylyltransferase
RA	4,353,932	C→T	8.1%	H338H (CAC→CAT)	yrpB →	2‑nitropropane dioxygenase
RA	4,353,933	A→G	8.0%	M339V (ATG→GTG)	yrpB →	2‑nitropropane dioxygenase
RA	4,355,090	Δ1 bp	8.0%	coding (246/681 nt)	modB →	molybdate ABC transporter permease ModB
RA	4,355,094:1	+C	8.3%	coding (250/681 nt)	modB →	molybdate ABC transporter permease ModB
RA	4,356,318	G→C	8.0%	G264G (GGG→GGC)	modC →	molybdate ABC transporter ATP‑binding protein ModC
RA	4,365,208	A→C	6.3%	intergenic (‑25/‑48)	PP_3841 ← / → PP_3842	MerR family transcriptional regulator/hypothetical protein
RA	4,365,209	G→T	6.3%	intergenic (‑26/‑47)	PP_3841 ← / → PP_3842	MerR family transcriptional regulator/hypothetical protein
RA	4,382,865	G→A	5.9%	intergenic (‑32/+230)	PP_3857 ← / ← PP_3858	hypothetical protein/tail fiber protein
RA	4,382,866	T→C	5.6%	intergenic (‑33/+229)	PP_3857 ← / ← PP_3858	hypothetical protein/tail fiber protein
RA	4,402,074	A→C	6.4%	L375R (CTG→CGG) ‡	PP_3881 ←	terminase large subunit
RA	4,402,075	G→T	6.9%	L375M (CTG→ATG) ‡	PP_3881 ←	terminase large subunit
RA	4,405,358	C→T	8.1%	G83R (GGG→AGG)	PP_3886 ←	hypothetical protein
RA	4,405,364	T→C	7.7%	M81V (ATG→GTG)	PP_3886 ←	hypothetical protein
RA	4,405,365	G→A	7.3%	H80H (CAC→CAT)	PP_3886 ←	hypothetical protein
RA	4,405,371	A→G	8.0%	P78P (CCT→CCC)	PP_3886 ←	hypothetical protein
RA	4,409,076	A→G	6.7%	F428L (TTC→CTC)	PP_3893 ←	DNA helicase
RA	4,409,077	C→T	6.7%	E427E (GAG→GAA)	PP_3893 ←	DNA helicase
RA	4,410,822	G→C	7.1%	H121Q (CAC→CAG)	PP_3894 ←	replication protein O
RA	4,415,076	T→C	7.2%	intergenic (+141/+27)	PP_5644 → / ← PP_3899	membrane protein/hicB family protein
RA	4,415,081	G→A	7.4%	intergenic (+146/+22)	PP_5644 → / ← PP_3899	membrane protein/hicB family protein
RA	4,416,126	Δ1 bp	7.4%	intergenic (+24/+95)	PP_3901 → / ← PP_3902	hypothetical protein/hypothetical protein
RA	4,416,131:1	+G	8.1%	intergenic (+29/+90)	PP_3901 → / ← PP_3902	hypothetical protein/hypothetical protein
RA	4,428,505	T→G	5.4%	D102A (GAC→GCC)	sohB ←	peptidase
RA	4,438,253	A→T	6.3%	K457* (AAG→TAG) ‡	PP_3932 →	diguanylate cyclase
RA	4,438,254	A→T	6.2%	K457M (AAG→ATG) ‡	PP_3932 →	diguanylate cyclase
RA	4,445,294	C→G	12.1%	G117A (GGG→GCG) ‡	nicE ←	maleate isomerase
RA	4,445,295	C→G	12.1%	G117R (GGG→CGG) ‡	nicE ←	maleate isomerase
RA	4,447,882:1	+T	11.5%	intergenic (‑274/‑48)	nicC ← / → nicX	6‑hydroxynicotinate 3‑monooxygenase/2,5‑dihydroxypyridine 5,6‑dioxygenase
RA	4,447,887	C→G	11.3%	intergenic (‑279/‑43)	nicC ← / → nicX	6‑hydroxynicotinate 3‑monooxygenase/2,5‑dihydroxypyridine 5,6‑dioxygenase
RA	4,447,892	Δ1 bp	9.0%	intergenic (‑284/‑38)	nicC ← / → nicX	6‑hydroxynicotinate 3‑monooxygenase/2,5‑dihydroxypyridine 5,6‑dioxygenase
RA	4,450,173	C→G	11.4%	A68G (GCC→GGC)	nicA →	nicotinate dehydrogenase subunit A
RA	4,475,136	C→G	5.2%	P148P (CCG→CCC)	PP_3964 ←	transposase
RA	4,475,631	A→T	5.5%	intergenic (‑52/+12)	PP_3964 ← / ← PP_3965	transposase/transposase
RA	4,475,632	A→T	5.5%	intergenic (‑53/+11)	PP_3964 ← / ← PP_3965	transposase/transposase
RA	4,479,857	A→G	5.2%	P388P (CCA→CCG)	ybdR →	Zn‑dependent oxidoreductase
RA	4,479,863	T→A	5.6%	A390A (GCT→GCA)	ybdR →	Zn‑dependent oxidoreductase
RA	4,480,610	C→A	7.5%	A145A (GCC→GCA)	PP_3972 →	short‑chain dehydrogenase/reductase family oxidoreductase
RA	4,480,611	T→G	7.6%	C146G (TGC→GGC)	PP_3972 →	short‑chain dehydrogenase/reductase family oxidoreductase
RA	4,484,768	A→T	8.1%	intergenic (+368/‑101)	PP_3976 → / → PP_3977	isochorismatase family hydrolase/hypothetical protein
RA	4,484,771	A→T	8.1%	intergenic (+371/‑98)	PP_3976 → / → PP_3977	isochorismatase family hydrolase/hypothetical protein
RA	4,490,333	C→A	8.0%	Q525H (CAG→CAT) ‡	PP_3982 ←	hypothetical protein
RA	4,490,334	T→G	7.7%	Q525P (CAG→CCG) ‡	PP_3982 ←	hypothetical protein
RA	4,501,341	A→T	6.0%	intergenic (‑236/+19)	PP_3989 ← / ← PP_t60	DNA‑cytosine methyltransferase/tRNA‑Ser
RA	4,501,344	A→T	6.0%	intergenic (‑239/+16)	PP_3989 ← / ← PP_t60	DNA‑cytosine methyltransferase/tRNA‑Ser
RA	4,503,833	C→T	11.4%	intergenic (+38/‑60)	xanP → / → tusD	xanthine permease/sulfur transfer protein complex subunit TusD
RA	4,503,834	A→G	11.6%	intergenic (+39/‑59)	xanP → / → tusD	xanthine permease/sulfur transfer protein complex subunit TusD
RA	4,512,506	C→A	10.6%	G9V (GGT→GTT)	lolA ←	outer membrane lipoprotein carrier protein
RA	4,512,509	T→G	10.2%	N8T (AAC→ACC)	lolA ←	outer membrane lipoprotein carrier protein
RA	4,528,397	T→A	5.3%	intergenic (+28/‑48)	purB → / → PP_4017	adenylosuccinate lyase/hypothetical protein
RA	4,530,069	T→A	13.3%	intergenic (+31/‑137)	PP_4018 → / → topB	acetyltransferase/DNA topoisomerase III
RA	4,530,070	T→A	13.4%	intergenic (+32/‑136)	PP_4018 → / → topB	acetyltransferase/DNA topoisomerase III
RA	4,541,821:1	+G	5.6%	coding (494/1503 nt)	nhaB →	Na(+)/H(+) antiporter NhaB
RA	4,541,825	Δ1 bp	5.6%	coding (498/1503 nt)	nhaB →	Na(+)/H(+) antiporter NhaB
RA	4,557,078	A→C	5.9%	L148R (CTG→CGG)	gntZ ←	6‑phosphogluconate dehydrogenase
RA	4,561,287	G→C	6.2%	I102M (ATC→ATG)	PP_4048 ←	hypothetical protein
RA	4,571,649	A→G	8.7%	D490G (GAC→GGC) ‡	treY →	maltooligosyl trehalose synthase
RA	4,571,650	C→T	8.8%	D490D (GAC→GAT) ‡	treY →	maltooligosyl trehalose synthase
RA	4,598,547	C→G	5.2%	K436N (AAG→AAC)	PP_4071 ←	membrane protein
RA	4,602,690	T→C	6.2%	V160A (GTG→GCG)	PP_4074 →	hypothetical protein
RA	4,602,695	G→C	6.4%	E162Q (GAA→CAA)	PP_4074 →	hypothetical protein
RA	4,602,700	G→A	5.6%	A163A (GCG→GCA)	PP_4074 →	hypothetical protein
RA	4,605,418	A→C	7.0%	Q263P (CAG→CCG) ‡	PP_4077 →	hypothetical protein
RA	4,605,419	G→T	7.2%	Q263H (CAG→CAT) ‡	PP_4077 →	hypothetical protein
RA	4,607,458	A→T	7.4%	K29* (AAG→TAG) ‡	PP_4079 →	hypothetical protein
RA	4,607,459	A→T	7.1%	K29M (AAG→ATG) ‡	PP_4079 →	hypothetical protein
RA	4,607,466	G→T	5.9%	A31A (GCG→GCT)	PP_4079 →	hypothetical protein
RA	4,654,937	T→C	5.2%	intergenic (+43/‑215)	aceA → / → PP_4118	isocitrate lyase/membrane protein
RA	4,657,527	C→G	8.0%	T39T (ACC→ACG)	nuoC →	NADH‑quinone oxidoreductase subunit C/D
RA	4,657,536	C→G	8.1%	P42P (CCC→CCG)	nuoC →	NADH‑quinone oxidoreductase subunit C/D
RA	4,662,889	C→G	6.4%	A569A (GCC→GCG)	nuoG →	NADH‑quinone oxidoreductase subunit G
RA	4,662,890	C→G	6.6%	R570G (CGC→GGC)	nuoG →	NADH‑quinone oxidoreductase subunit G
RA	4,674,942	G→C	10.8%	L556L (CTG→CTC)	PP_4137 →	outer membrane siderophore receptor
RA	4,686,331	C→G	7.6%	A366A (GCC→GCG)	yejA →	microcin C ABC transporter substrate‑binding protein
RA	4,686,332	C→G	7.5%	R367G (CGC→GGC)	yejA →	microcin C ABC transporter substrate‑binding protein
RA	4,705,448	T→C	11.1%	intergenic (‑140/+37)	kdpF ← / ← PP_4162	potassium‑transporting ATPase subunit F/membrane protein
RA	4,705,449	C→T	11.1%	intergenic (‑141/+36)	kdpF ← / ← PP_4162	potassium‑transporting ATPase subunit F/membrane protein
RA	4,705,459	T→A	18.8%	intergenic (‑151/+26)	kdpF ← / ← PP_4162	potassium‑transporting ATPase subunit F/membrane protein
RA	4,705,460	T→A	18.9%	intergenic (‑152/+25)	kdpF ← / ← PP_4162	potassium‑transporting ATPase subunit F/membrane protein
RA	4,705,470	A→G	15.4%	intergenic (‑162/+15)	kdpF ← / ← PP_4162	potassium‑transporting ATPase subunit F/membrane protein
RA	4,705,471	G→A	13.9%	intergenic (‑163/+14)	kdpF ← / ← PP_4162	potassium‑transporting ATPase subunit F/membrane protein
RA	4,707,364	C→G	9.4%	intergenic (‑20/+90)	PP_4163 ← / ← PP_4164	hypothetical protein/alpha/beta hydrolase
RA	4,716,693	G→C	5.2%	Q626H (CAG→CAC)	PP_4173 →	two‑component system sensor histidine kinase/response regulator
RA	4,716,694	G→C	5.1%	V627L (GTG→CTG)	PP_4173 →	two‑component system sensor histidine kinase/response regulator
RA	4,722,554	A→T	5.3%	D352E (GAT→GAA)	htpG ←	chaperone protein HtpG
RA	4,740,841	T→G	5.5%	intergenic (+32/+720)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,740,842	C→A	5.3%	intergenic (+33/+719)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,740,884	C→G	15.0%	intergenic (+75/+677)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,740,886	T→A	15.5%	intergenic (+77/+675)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,740,887	T→A	15.5%	intergenic (+78/+674)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,740,889	C→G	15.0%	intergenic (+80/+672)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,273:1	+C	69.1%	intergenic (+464/+288)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,274	A→C	30.6%	intergenic (+465/+287)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,275	A→G	69.2%	intergenic (+466/+286)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,275:1	+G	7.4%	intergenic (+466/+286)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,276	C→G	23.5%	intergenic (+467/+285)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,277	C→T	75.3%	intergenic (+468/+284)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,279	C→T	22.0%	intergenic (+470/+282)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,280	C→T	78.3%	intergenic (+471/+281)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,280:1	+T	8.8%	intergenic (+471/+281)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,281	G→T	13.0%	intergenic (+472/+280)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,282	C→G	13.2%	intergenic (+473/+279)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,283	C→G	86.8%	intergenic (+474/+278)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,284	A→G	13.2%	intergenic (+475/+277)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,285	A→C	87.0%	intergenic (+476/+276)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,286	C→T	86.8%	intergenic (+477/+275)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,286:1	+T	13.2%	intergenic (+477/+275)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,298:1	+T	54.5%	intergenic (+489/+263)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,299	C→T	45.2%	intergenic (+490/+262)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,301	A→C	44.8%	intergenic (+492/+260)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,302	A→G	54.6%	intergenic (+493/+259)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,304	C→G	45.3%	intergenic (+495/+257)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,305	Δ1 bp	54.5%	intergenic (+496/+256)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,744,784	G→A	9.3%	A29A (GCC→GCT)	PP_4198 ←	OmpA family protein
RA	4,744,788	C→G	9.5%	S28T (AGT→ACT)	PP_4198 ←	OmpA family protein
RA	4,744,792	T→C	9.5%	S27G (AGC→GGC)	PP_4198 ←	OmpA family protein
RA	4,745,183	A→T	7.6%	L13H (CTC→CAC)	PP_4199 ←	lipoprotein
RA	4,745,186	A→T	7.8%	V12E (GTG→GAG)	PP_4199 ←	lipoprotein
RA	4,750,059	Δ1 bp	6.5%	intergenic (+35/+37)	PP_4203 → / ← mqsA	ubiquinone oxidoreductase electron transfer flavoprotein/type II toxin‑antitoxin MqsRA system antitoxin/DNA‑binding transcriptional repressor
RA	4,750,060	Δ1 bp	6.5%	intergenic (+36/+36)	PP_4203 → / ← mqsA	ubiquinone oxidoreductase electron transfer flavoprotein/type II toxin‑antitoxin MqsRA system antitoxin/DNA‑binding transcriptional repressor
RA	4,758,181	G→C	6.6%	R470P (CGC→CCC)	ompQ →	outer membrane pyoverdine efflux protein
RA	4,758,186	G→C	6.4%	intergenic (+1/+20)	ompQ → / ← pvdP	outer membrane pyoverdine efflux protein/pyoverdine biosynthesis‑like protein
RA	4,760,260	T→G	7.1%	F93V (TTC→GTC)	pvdM →	dipeptidase
RA	4,760,265	C→A	5.7%	D94E (GAC→GAA)	pvdM →	dipeptidase
RA	4,767,863	C→T	8.4%	intergenic (+32/+37)	fpvA → / ← PP_4218	TonB‑dependent outer membrane ferripyoverdine receptor FpvA/lipase/esterase family protein
RA	4,767,864	A→G	8.2%	intergenic (+33/+36)	fpvA → / ← PP_4218	TonB‑dependent outer membrane ferripyoverdine receptor FpvA/lipase/esterase family protein
RA	4,768,102	G→C	6.1%	P252R (CCT→CGT) ‡	PP_4218 ←	lipase/esterase family protein
RA	4,768,103	G→C	6.1%	P252A (CCT→GCT) ‡	PP_4218 ←	lipase/esterase family protein
RA	4,780,166	A→G	10.7%	V2398A (GTG→GCG) ‡	pvdJ ←	non‑ribosomal peptide synthetase
RA	4,780,167	C→T	10.5%	V2398M (GTG→ATG) ‡	pvdJ ←	non‑ribosomal peptide synthetase
RA	4,791,573	A→G	6.0%	L771P (CTG→CCG)	pvdI ←	non‑ribosomal peptide synthetase
RA	4,791,577	G→C	5.5%	L770V (CTG→GTG)	pvdI ←	non‑ribosomal peptide synthetase
RA	4,795,165	G→T	8.2%	F441L (TTC→TTA) ‡	pvdH ←	diaminobutyrate‑2‑oxoglutarate transaminase
RA	4,795,166	A→C	8.5%	F441C (TTC→TGC) ‡	pvdH ←	diaminobutyrate‑2‑oxoglutarate transaminase
RA	4,796,659	Δ1 bp	15.4%	intergenic (‑172/+46)	pvdH ← / ← PP_4224	diaminobutyrate‑2‑oxoglutarate transaminase/sensor histidine kinase
RA	4,796,662	G→C	18.9%	intergenic (‑175/+43)	pvdH ← / ← PP_4224	diaminobutyrate‑2‑oxoglutarate transaminase/sensor histidine kinase
RA	4,796,664	A→G	18.9%	intergenic (‑177/+41)	pvdH ← / ← PP_4224	diaminobutyrate‑2‑oxoglutarate transaminase/sensor histidine kinase
RA	4,796,672	C→T	16.2%	intergenic (‑185/+33)	pvdH ← / ← PP_4224	diaminobutyrate‑2‑oxoglutarate transaminase/sensor histidine kinase
RA	4,803,225	T→G	5.3%	N45T (AAC→ACC)	PP_4231 ←	xanthine dehydrogenase accessory factor
RA	4,803,227	C→G	5.2%	V44V (GTG→GTC)	PP_4231 ←	xanthine dehydrogenase accessory factor
RA	4,806,160	A→T	5.4%	S593T (TCG→ACG)	PP_4234 ←	bifunctional aldehyde oxidase/xanthine dehydrogenase
RA	4,808,234	G→C	6.9%	intergenic (‑298/‑257)	PP_4234 ← / → dsbD‑II	bifunctional aldehyde oxidase/xanthine dehydrogenase/thiol/disulfide interchange protein 2
RA	4,808,237	G→C	6.7%	intergenic (‑301/‑254)	PP_4234 ← / → dsbD‑II	bifunctional aldehyde oxidase/xanthine dehydrogenase/thiol/disulfide interchange protein 2
RA	4,812,228	C→T	7.2%	intergenic (+103/‑290)	PP_4238 → / → PP_5665	hypothetical protein/McbA family microcin B17‑like processing protein
RA	4,812,229	A→T	7.2%	intergenic (+104/‑289)	PP_4238 → / → PP_5665	hypothetical protein/McbA family microcin B17‑like processing protein
RA	4,812,230	A→G	7.2%	intergenic (+105/‑288)	PP_4238 → / → PP_5665	hypothetical protein/McbA family microcin B17‑like processing protein
RA	4,824,196	A→G	6.6%	F2347L (TTC→CTC)	pvdL ←	non‑ribosomal peptide synthetase
RA	4,824,197	C→T	6.6%	E2346E (GAG→GAA)	pvdL ←	non‑ribosomal peptide synthetase
RA	4,824,317	G→C	5.1%	S2306R (AGC→AGG)	pvdL ←	non‑ribosomal peptide synthetase
RA	4,832,099	A→T	8.3%	intergenic (+29/+123)	pvdS → / ← pvdY	alternative sigma factor/hydroxyproline acetylase
RA	4,832,102	T→A	8.5%	intergenic (+32/+120)	pvdS → / ← pvdY	alternative sigma factor/hydroxyproline acetylase
RA	4,832,105	A→T	8.7%	intergenic (+35/+117)	pvdS → / ← pvdY	alternative sigma factor/hydroxyproline acetylase
RA	4,837,325	C→T	8.0%	A429A (GCC→GCT)	ccoN‑I →	cbb3‑type cytochrome c oxidase subunit 1
RA	4,837,326	A→G	8.0%	S430G (AGC→GGC)	ccoN‑I →	cbb3‑type cytochrome c oxidase subunit 1
RA	4,837,333	C→A	6.4%	P432Q (CCA→CAA)	ccoN‑I →	cbb3‑type cytochrome c oxidase subunit 1
RA	4,839,266	C→G	13.8%	intergenic (+43/‑137)	ccoP‑I → / → PP_4254	cbb3‑type cytochrome c oxidase subunit/hypothetical protein
RA	4,839,269	C→G	14.3%	intergenic (+46/‑134)	ccoP‑I → / → PP_4254	cbb3‑type cytochrome c oxidase subunit/hypothetical protein
RA	4,841,156	T→A	5.1%	L12Q (CTG→CAG)	ccoO‑II →	cbb3‑type cytochrome c oxidase subunit
RA	4,842,941	Δ1 bp	28.0%	intergenic (+40/‑257)	ccoP‑II → / → PP_4259	cbb3‑type cytochrome c oxidase subunit/iron‑sulfur cluster‑binding protein
RA	4,842,949:1	+G	27.3%	intergenic (+48/‑249)	ccoP‑II → / → PP_4259	cbb3‑type cytochrome c oxidase subunit/iron‑sulfur cluster‑binding protein
RA	4,843,918	C→A	9.3%	L241M (CTG→ATG) ‡	PP_4259 →	iron‑sulfur cluster‑binding protein
RA	4,843,920	G→C	9.1%	L241L (CTG→CTC) ‡	PP_4259 →	iron‑sulfur cluster‑binding protein
RA	4,843,922	T→G	9.0%	I242S (ATC→AGC)	PP_4259 →	iron‑sulfur cluster‑binding protein
RA	4,850,203	C→T	6.9%	intergenic (+75/‑112)	hemN → / → fnrA	oxygen‑independent coproporphyrinogen III dehydrogenase/DNA‑binding transcriptional dual regulator
RA	4,850,204	C→G	7.0%	intergenic (+76/‑111)	hemN → / → fnrA	oxygen‑independent coproporphyrinogen III dehydrogenase/DNA‑binding transcriptional dual regulator
RA	4,850,205	A→G	6.8%	intergenic (+77/‑110)	hemN → / → fnrA	oxygen‑independent coproporphyrinogen III dehydrogenase/DNA‑binding transcriptional dual regulator
RA	4,855,584	T→G	7.9%	I106M (ATT→ATG)	PP_4270 →	hypothetical protein
RA	4,855,585	C→A	8.0%	H107N (CAT→AAT)	PP_4270 →	hypothetical protein
RA	4,857,969	A→C	7.6%	T4T (ACT→ACG) ‡	PP_4272 ←	membrane protein
RA	4,857,970	G→T	6.0%	T4N (ACT→AAT) ‡	PP_4272 ←	membrane protein
RA	4,858,564	A→C	8.1%	intergenic (‑25/+200)	PP_mr50 ← / ← ligA	Bacteria_large_SRP ncRNA/DNA ligase
RA	4,858,565	G→T	6.3%	intergenic (‑26/+199)	PP_mr50 ← / ← ligA	Bacteria_large_SRP ncRNA/DNA ligase
RA	4,861,272	G→T	5.7%	intergenic (‑178/+59)	ligA ← / ← PP_4275	DNA ligase/cell division protein ZipA
RA	4,866,063	G→A	5.4%	A173V (GCC→GTC)	PP_4277 ←	GntR family transcriptional regulator
RA	4,866,068	G→T	13.0%	R171R (CGC→CGA)	PP_4277 ←	GntR family transcriptional regulator
RA	4,866,075	T→A	11.8%	D169V (GAC→GTC)	PP_4277 ←	GntR family transcriptional regulator
RA	4,866,082	A→C	8.0%	S167A (TCG→GCG)	PP_4277 ←	GntR family transcriptional regulator
RA	4,872,361	C→T	7.1%	H231Y (CAC→TAC)	guaD →	guanine deaminase
RA	4,875,931	G→A	6.1%	G358G (GGG→GGA)	PP_4284 →	transporter
RA	4,875,934	G→C	6.3%	M359I (ATG→ATC)	PP_4284 →	transporter
RA	4,882,252:1	+A	5.6%	coding (1290/1356 nt)	uacT →	uric acid permease
RA	4,882,257	Δ1 bp	5.6%	coding (1295/1356 nt)	uacT →	uric acid permease
RA	4,885,007	T→G	7.1%	E139A (GAA→GCA) ‡	yedI ←	inner membrane protein
RA	4,885,008	C→A	5.0%	E139* (GAA→TAA) ‡	yedI ←	inner membrane protein
RA	4,896,422	C→T	5.9%	intergenic (+10/‑198)	PP_4304 → / → sbp‑I	VIC family cation transporter/sulfate ABC transporter substrate‑binding protein
RA	4,900,096	G→A	7.3%	intergenic (+12/‑486)	PP_4308 → / → PP_4309	AsnC family transcriptional regulator/NCS1 family transporter
RA	4,900,110	A→G	18.3%	intergenic (+26/‑472)	PP_4308 → / → PP_4309	AsnC family transcriptional regulator/NCS1 family transporter
RA	4,900,114	G→A	16.7%	intergenic (+30/‑468)	PP_4308 → / → PP_4309	AsnC family transcriptional regulator/NCS1 family transporter
RA	4,900,115	T→C	16.9%	intergenic (+31/‑467)	PP_4308 → / → PP_4309	AsnC family transcriptional regulator/NCS1 family transporter
RA	4,900,119	C→T	17.8%	intergenic (+35/‑463)	PP_4308 → / → PP_4309	AsnC family transcriptional regulator/NCS1 family transporter
RA	4,900,133	T→C	8.8%	intergenic (+49/‑449)	PP_4308 → / → PP_4309	AsnC family transcriptional regulator/NCS1 family transporter
RA	4,902,716	G→A	7.2%	V196M (GTG→ATG) ‡	PP_4310 →	hydantoin racemase
RA	4,902,717	T→C	7.2%	V196A (GTG→GCG) ‡	PP_4310 →	hydantoin racemase
RA	4,906,508	A→T	8.7%	L112Q (CTG→CAG)	PP_4315 ←	epimerase
RA	4,906,511	A→T	10.7%	L111Q (CTG→CAG)	PP_4315 ←	epimerase
RA	4,917,404	A→T	6.3%	F25I (TTC→ATC)	ccmA ←	cytochrome c biogenesis ABC transporter ATP‑binding protein CcmA
RA	4,917,405	A→T	6.3%	D24E (GAT→GAA)	ccmA ←	cytochrome c biogenesis ABC transporter ATP‑binding protein CcmA
RA	4,918,010	G→A	9.4%	V122I (GTC→ATC) ‡	PP_4328 →	hypothetical protein
RA	4,918,011	T→C	10.1%	V122A (GTC→GCC) ‡	PP_4328 →	hypothetical protein
RA	4,918,219	C→G	5.3%	L191L (CTC→CTG)	PP_4328 →	hypothetical protein
RA	4,927,140	T→G	5.1%	K263Q (AAG→CAG)	cheBA ←	chemotaxis response regulator protein‑glutamate methylesterase
RA	4,927,149	G→T	7.5%	P260T (CCC→ACC)	cheBA ←	chemotaxis response regulator protein‑glutamate methylesterase
RA	4,930,186	G→C	9.1%	Q11E (CAG→GAG)	cheA ←	chemotaxis histidine kinase CheA
RA	4,930,187	G→C	9.1%	L10L (CTC→CTG)	cheA ←	chemotaxis histidine kinase CheA
RA	4,931,240	A→G	8.1%	S59P (TCC→CCC)	cheY ←	two‑component system response regulator
RA	4,931,245	C→T	8.8%	G57D (GGC→GAC)	cheY ←	two‑component system response regulator
RA	4,934,874	C→T	7.8%	V587V (GTG→GTA)	flhA ←	flagellar export pore protein
RA	4,934,883	Δ1 bp	5.1%	coding (1752/2130 nt)	flhA ←	flagellar export pore protein
RA	4,934,898	A→G	5.2%	D579D (GAT→GAC)	flhA ←	flagellar export pore protein
RA	4,936,671	G→C	11.6%	intergenic (‑37/‑381)	flhA ← / → PP_4345	flagellar export pore protein/GntR family transcriptional regulator
RA	4,936,673	G→C	13.2%	intergenic (‑39/‑379)	flhA ← / → PP_4345	flagellar export pore protein/GntR family transcriptional regulator
RA	4,936,675	G→C	11.9%	intergenic (‑41/‑377)	flhA ← / → PP_4345	flagellar export pore protein/GntR family transcriptional regulator
RA	4,945,056	C→T	6.1%	intergenic (+371/+427)	PP_5673 → / ← flhB	D‑alanine‑‑D‑alanine ligase/flagellin export apparatus substrate specificity protein
RA	4,945,310	A→G	6.7%	intergenic (+625/+173)	PP_5673 → / ← flhB	D‑alanine‑‑D‑alanine ligase/flagellin export apparatus substrate specificity protein
RA	4,945,325	C→G	6.8%	intergenic (+640/+158)	PP_5673 → / ← flhB	D‑alanine‑‑D‑alanine ligase/flagellin export apparatus substrate specificity protein
RA	4,945,327	C→G	6.8%	intergenic (+642/+156)	PP_5673 → / ← flhB	D‑alanine‑‑D‑alanine ligase/flagellin export apparatus substrate specificity protein
RA	4,945,329	T→C	6.8%	intergenic (+644/+154)	PP_5673 → / ← flhB	D‑alanine‑‑D‑alanine ligase/flagellin export apparatus substrate specificity protein
RA	4,945,331	C→T	6.5%	intergenic (+646/+152)	PP_5673 → / ← flhB	D‑alanine‑‑D‑alanine ligase/flagellin export apparatus substrate specificity protein
RA	4,945,332	A→G	6.9%	intergenic (+647/+151)	PP_5673 → / ← flhB	D‑alanine‑‑D‑alanine ligase/flagellin export apparatus substrate specificity protein
RA	4,945,333	C→T	7.2%	intergenic (+648/+150)	PP_5673 → / ← flhB	D‑alanine‑‑D‑alanine ligase/flagellin export apparatus substrate specificity protein
RA	4,945,342	T→C	7.1%	intergenic (+657/+141)	PP_5673 → / ← flhB	D‑alanine‑‑D‑alanine ligase/flagellin export apparatus substrate specificity protein
RA	4,945,346	C→T	7.2%	intergenic (+661/+137)	PP_5673 → / ← flhB	D‑alanine‑‑D‑alanine ligase/flagellin export apparatus substrate specificity protein
RA	4,945,372	C→A	7.6%	intergenic (+687/+111)	PP_5673 → / ← flhB	D‑alanine‑‑D‑alanine ligase/flagellin export apparatus substrate specificity protein
RA	4,945,374	G→T	7.1%	intergenic (+689/+109)	PP_5673 → / ← flhB	D‑alanine‑‑D‑alanine ligase/flagellin export apparatus substrate specificity protein
RA	4,945,377	C→T	7.7%	intergenic (+692/+106)	PP_5673 → / ← flhB	D‑alanine‑‑D‑alanine ligase/flagellin export apparatus substrate specificity protein
RA	4,945,378	A→G	8.9%	intergenic (+693/+105)	PP_5673 → / ← flhB	D‑alanine‑‑D‑alanine ligase/flagellin export apparatus substrate specificity protein
RA	4,951,017	T→G	10.9%	intergenic (‑122/+35)	fliL ← / ← fliK	flagellar protein FliL/flagellar hook‑length control protein FliK
RA	4,951,018	C→A	9.7%	intergenic (‑123/+34)	fliL ← / ← fliK	flagellar protein FliL/flagellar hook‑length control protein FliK
RA	4,958,644	C→T	5.0%	R34Q (CGG→CAG)	fliG ←	flagellar motor switch protein
RA	4,958,647	A→G	5.2%	L33P (CTG→CCG)	fliG ←	flagellar motor switch protein
RA	4,958,652	C→A	6.1%	Q31H (CAG→CAT)	fliG ←	flagellar motor switch protein
RA	4,970,038	T→G	8.3%	T84P (ACT→CCT)	fliC ←	flagellin
RA	4,970,049	C→A	8.4%	G80V (GGC→GTC)	fliC ←	flagellin
RA	4,973,318	T→G	7.0%	E92A (GAG→GCG) ‡	flgL ←	flagellar hook‑associated protein FlgL
RA	4,973,319	C→A	6.4%	E92* (GAG→TAG) ‡	flgL ←	flagellar hook‑associated protein FlgL
RA	4,974,081	T→A	7.5%	K523M (AAG→ATG) ‡	flgK ←	flagellar hook‑associated protein FlgK
RA	4,974,082	T→A	7.6%	K523* (AAG→TAG) ‡	flgK ←	flagellar hook‑associated protein FlgK
RA	4,976,252	A→C	7.0%	G188G (GGT→GGG)	flgJ ←	peptidoglycan hydrolase FlgJ
RA	4,976,257	C→G	6.2%	D187H (GAC→CAC)	flgJ ←	peptidoglycan hydrolase FlgJ
RA	4,978,160	C→T	9.7%	R162H (CGC→CAC)	flgH ←	flagellar L‑ring protein
RA	4,978,163	A→G	9.5%	V161A (GTG→GCG)	flgH ←	flagellar L‑ring protein
RA	4,986,096	C→G	7.2%	P97R (CCG→CGG)	flgA →	flagella basal body P‑ring formation protein
RA	4,995,569	Δ1 bp	6.4%	coding (1185/1272 nt)	bkdB →	branched‑chain alpha‑keto acid dehydrogenase complex lipoamide acyltransferase
RA	4,995,572:1	+G	6.2%	coding (1188/1272 nt)	bkdB →	branched‑chain alpha‑keto acid dehydrogenase complex lipoamide acyltransferase
RA	4,997,649	C→A	8.6%	R167L (CGG→CTG)	PP_4405 ←	sensory box protein
RA	4,997,652	T→G	8.3%	Q166P (CAG→CCG)	PP_4405 ←	sensory box protein
RA	5,000,799	A→G	6.7%	intergenic (+221/‑1465)	PP_4407 → / → PP_4409	gamma‑aminobutyrate transporter/site‑specific recombinase
RA	5,013,335	G→C	6.2%	L36L (CTG→CTC)	PP_5678 →	hypothetical protein
RA	5,013,339	G→A	5.7%	A38T (GCG→ACG)	PP_5678 →	hypothetical protein
RA	5,015,960	A→T	9.9%	intergenic (‑175/+59)	PP_5679 ← / ← PP_4421	hypothetical protein/aminotransferase
RA	5,015,961	A→T	9.8%	intergenic (‑176/+58)	PP_5679 ← / ← PP_4421	hypothetical protein/aminotransferase
RA	5,026,798	A→T	7.9%	T20T (ACA→ACT)	ocd →	ornithine cyclodeaminase
RA	5,026,800	A→T	6.7%	D21V (GAC→GTC)	ocd →	ornithine cyclodeaminase
RA	5,026,802	A→T	6.7%	S22C (AGT→TGT)	ocd →	ornithine cyclodeaminase
RA	5,027,332:1	+C	5.7%	coding (594/993 nt)	ocd →	ornithine cyclodeaminase
RA	5,028,664	C→G	6.3%	A295G (GCC→GGC)	PP_4432 →	Xaa‑Pro aminopeptidase
RA	5,030,796	A→G	9.1%	intergenic (+34/‑461)	PP_4433 → / → dadA‑I	amino acid MFS transporter/D‑amino acid dehydrogenase small subunit
RA	5,030,799	C→T	9.0%	intergenic (+37/‑458)	PP_4433 → / → dadA‑I	amino acid MFS transporter/D‑amino acid dehydrogenase small subunit
RA	5,039,700	G→T	8.7%	I284I (ATC→ATA) ‡	PP_4446 ←	group II intron‑encoding maturase
RA	5,039,701	A→C	8.8%	I284S (ATC→AGC) ‡	PP_4446 ←	group II intron‑encoding maturase
RA	5,041,297	T→A	6.1%	intergenic (+227/‑435)	PP_5680 → / → PP_4447	Cro/CI family transcriptional regulator/hypothetical protein
RA	5,041,300	T→A	5.9%	intergenic (+230/‑432)	PP_5680 → / → PP_4447	Cro/CI family transcriptional regulator/hypothetical protein
RA	5,052,096	G→T	6.2%	L156M (CTG→ATG)	PP_4452 ←	NAD/NADP octopine/nopaline dehydrogenase family protein
RA	5,052,099	A→C	6.4%	S155A (TCG→GCG)	PP_4452 ←	NAD/NADP octopine/nopaline dehydrogenase family protein
RA	5,077,282	G→T	5.7%	intergenic (+29/+79)	PP_4470 → / ← mgtE	Arc domain‑containing transcriptional regulator/magnesium transporter
RA	5,077,285	A→C	5.6%	intergenic (+32/+76)	PP_4470 → / ← mgtE	Arc domain‑containing transcriptional regulator/magnesium transporter
RA	5,079,174	T→A	16.9%	intergenic (‑371/+26)	mgtE ← / ← PP_t56	magnesium transporter/tRNA‑Arg
RA	5,079,177	T→A	17.0%	intergenic (‑374/+23)	mgtE ← / ← PP_t56	magnesium transporter/tRNA‑Arg
RA	5,080,326	A→T	8.2%	intergenic (‑143/+25)	csrA ← / ← lysC	carbon storage regulator/aspartokinase
RA	5,080,327	A→T	8.2%	intergenic (‑144/+24)	csrA ← / ← lysC	carbon storage regulator/aspartokinase
RA	5,105,711	T→C	7.1%	S817G (AGC→GGC)	ydiJ ←	putative oxidoreductase
RA	5,105,716	G→A	6.6%	P815L (CCG→CTG)	ydiJ ←	putative oxidoreductase
RA	5,115,751	T→G	5.6%	H28P (CAC→CCC)	PP_4500 ←	TrpH family protein
RA	5,115,762	C→A	6.1%	R24R (CGG→CGT)	PP_4500 ←	TrpH family protein
RA	5,119,243	G→C	7.4%	L323L (CTG→CTC)	PP_4505 →	sensor histidine kinase
RA	5,119,244	G→C	7.1%	E324Q (GAG→CAG)	PP_4505 →	sensor histidine kinase
RA	5,121,320	T→C	9.0%	H305H (CAT→CAC)	trkH‑II →	potassium transporter
RA	5,121,321	G→A	8.9%	V306M (GTG→ATG)	trkH‑II →	potassium transporter
RA	5,129,374	A→C	7.7%	F693C (TTC→TGC)	recQ ←	ATP‑dependent DNA 3'‑5' helicase
RA	5,129,376	C→G	6.8%	Q692H (CAG→CAC) ‡	recQ ←	ATP‑dependent DNA 3'‑5' helicase
RA	5,129,378	G→T	6.6%	Q692K (CAG→AAG) ‡	recQ ←	ATP‑dependent DNA 3'‑5' helicase
RA	5,141,747	G→A	6.5%	V12M (GTG→ATG) ‡	PP_4526 →	MFS transporter
RA	5,141,748	T→C	7.0%	V12A (GTG→GCG) ‡	PP_4526 →	MFS transporter
RA	5,142,055	G→C	6.0%	M114I (ATG→ATC)	PP_4526 →	MFS transporter
RA	5,156,379	C→T	6.1%	R264C (CGC→TGC)	PP_4539 →	LysR family transcriptional regulator
RA	5,173,292	T→C	9.6%	intergenic (‑285/+47)	fadD‑I ← / ← fadD‑II	long‑chain‑fatty acid‑‑CoA ligase/long‑chain‑fatty acid‑‑CoA ligase
RA	5,173,295	G→C	9.2%	intergenic (‑288/+44)	fadD‑I ← / ← fadD‑II	long‑chain‑fatty acid‑‑CoA ligase/long‑chain‑fatty acid‑‑CoA ligase
RA	5,173,296	G→C	9.2%	intergenic (‑289/+43)	fadD‑I ← / ← fadD‑II	long‑chain‑fatty acid‑‑CoA ligase/long‑chain‑fatty acid‑‑CoA ligase
RA	5,173,299	G→A	10.3%	intergenic (‑292/+40)	fadD‑I ← / ← fadD‑II	long‑chain‑fatty acid‑‑CoA ligase/long‑chain‑fatty acid‑‑CoA ligase
RA	5,180,060	C→G	5.1%	intergenic (‑240/‑43)	PP_4557 ← / → PP_4558	hypothetical protein/GNAT family acetyltransferase
RA	5,182,107	G→T	10.9%	intergenic (‑117/+37)	PP_4560 ← / ← csbD	ribonuclease BN/stress response protein
RA	5,182,113	T→G	10.4%	intergenic (‑123/+31)	PP_4560 ← / ← csbD	ribonuclease BN/stress response protein
RA	5,182,114	C→A	10.2%	intergenic (‑124/+30)	PP_4560 ← / ← csbD	ribonuclease BN/stress response protein
RA	5,182,120	A→C	11.9%	intergenic (‑130/+24)	PP_4560 ← / ← csbD	ribonuclease BN/stress response protein
RA	5,182,971	G→C	7.7%	H271D (CAT→GAT)	PP_4563 ←	hypothetical protein
RA	5,182,972	G→C	7.7%	I270M (ATC→ATG)	PP_4563 ←	hypothetical protein
RA	5,183,051	A→T	5.4%	I244N (ATC→AAC)	PP_4563 ←	hypothetical protein
RA	5,183,216	T→G	5.6%	H189P (CAC→CCC)	PP_4563 ←	hypothetical protein
RA	5,183,223	C→A	5.2%	G187C (GGC→TGC)	PP_4563 ←	hypothetical protein
RA	5,184,158	A→C	7.8%	M83L (ATG→CTG)	PP_4564 →	lipoprotein
RA	5,184,165	C→T	9.1%	A85V (GCC→GTC)	PP_4564 →	lipoprotein
RA	5,184,168	A→G	9.8%	D86G (GAC→GGC)	PP_4564 →	lipoprotein
RA	5,184,175	G→T	9.0%	Q88H (CAG→CAT)	PP_4564 →	lipoprotein
RA	5,194,935	T→G	13.5%	intergenic (+29/+24)	PP_4574 → / ← PP_4575	hypothetical protein/urea amidolyase‑like protein
RA	5,194,936	C→A	13.4%	intergenic (+30/+23)	PP_4574 → / ← PP_4575	hypothetical protein/urea amidolyase‑like protein
RA	5,199,693	G→C	5.4%	intergenic (+20/+53)	PP_4579 → / ← PP_4580	LysR family transcriptional regulator/hypothetical protein
RA	5,201,653	A→T	6.1%	intergenic (‑91/‑89)	PP_4582 ← / → PP_4583	membrane protein/putative Peptidase
RA	5,201,878	C→T	7.5%	A46V (GCC→GTC)	PP_4583 →	putative Peptidase
RA	5,201,881	A→G	8.5%	D47G (GAC→GGC)	PP_4583 →	putative Peptidase
RA	5,203,029	C→A	11.1%	L430M (CTG→ATG) ‡	PP_4583 →	putative Peptidase
RA	5,203,030	T→G	11.1%	L430R (CTG→CGG) ‡	PP_4583 →	putative Peptidase
RA	5,205,866	C→G	6.9%	R205R (CGG→CGC)	PP_4586 ←	hypothetical protein
RA	5,205,873	C→G	6.9%	G203A (GGC→GCC) ‡	PP_4586 ←	hypothetical protein
RA	5,205,874	C→A	7.0%	G203C (GGC→TGC) ‡	PP_4586 ←	hypothetical protein
RA	5,205,876	T→A	6.9%	Q202L (CAG→CTG)	PP_4586 ←	hypothetical protein
RA	5,208,730	G→A	5.5%	D9D (GAC→GAT) ‡	PP_4589 ←	D‑isomer specific 2‑hydroxyacid dehydrogenase family protein
RA	5,208,731	T→C	5.6%	D9G (GAC→GGC) ‡	PP_4589 ←	D‑isomer specific 2‑hydroxyacid dehydrogenase family protein
RA	5,212,540	C→T	5.1%	intergenic (+56/+38)	PP_4593 → / ← PP_4594	hypothetical protein/cystathionine gamma‑synthase
RA	5,212,552	T→C	6.6%	intergenic (+68/+26)	PP_4593 → / ← PP_4594	hypothetical protein/cystathionine gamma‑synthase
RA	5,227,327	C→G	6.7%	A594P (GCA→CCA)	PP_4606 ←	ferric siderophore receptor
RA	5,227,331:1	+T	6.7%	coding (1776/2391 nt)	PP_4606 ←	ferric siderophore receptor
RA	5,229,227	G→A	15.4%	intergenic (‑121/+55)	PP_4606 ← / ← PP_4607	ferric siderophore receptor/transmembrane sensor
RA	5,229,239	Δ1 bp	20.8%	intergenic (‑133/+43)	PP_4606 ← / ← PP_4607	ferric siderophore receptor/transmembrane sensor
RA	5,229,243	C→G	21.2%	intergenic (‑137/+39)	PP_4606 ← / ← PP_4607	ferric siderophore receptor/transmembrane sensor
RA	5,229,246	C→G	20.5%	intergenic (‑140/+36)	PP_4606 ← / ← PP_4607	ferric siderophore receptor/transmembrane sensor
RA	5,229,249:1	+C	23.9%	intergenic (‑143/+33)	PP_4606 ← / ← PP_4607	ferric siderophore receptor/transmembrane sensor
RA	5,232,102	C→G	7.7%	A214A (GCG→GCC)	PP_4610 ←	PepSY‑associated TM helix domain‑containing protein
RA	5,232,105	C→G	7.7%	P213P (CCG→CCC)	PP_4610 ←	PepSY‑associated TM helix domain‑containing protein
RA	5,233,591	T→C	6.6%	V136A (GTC→GCC)	PP_4611 →	ECF family RNA polymerase sigma‑70 factor
RA	5,233,594	A→T	6.9%	D137V (GAC→GTC)	PP_4611 →	ECF family RNA polymerase sigma‑70 factor
RA	5,233,597	G→A	7.4%	G138D (GGC→GAC)	PP_4611 →	ECF family RNA polymerase sigma‑70 factor
RA	5,237,589	T→A	5.0%	M1M (TTG→ATG) †‡	PP_4614 →	hypothetical protein
RA	5,237,590	T→A	5.8%	M1* (TTG→TAG) †‡	PP_4614 →	hypothetical protein
RA	5,237,592	Δ1 bp	5.1%	coding (4/387 nt)	PP_4614 →	hypothetical protein
RA	5,239,932	G→A	13.9%	A144V (GCG→GTG)	ldh ←	leucine dehydrogenase
RA	5,239,937	T→C	13.0%	P142P (CCA→CCG)	ldh ←	leucine dehydrogenase
RA	5,244,283	G→C	7.1%	P83A (CCG→GCG)	hmgA ←	homogentisate 1,2‑dioxygenase
RA	5,244,296	G→C	7.2%	R78R (CGC→CGG)	hmgA ←	homogentisate 1,2‑dioxygenase
RA	5,257,737	A→C	8.1%	V38G (GTG→GGG)	PP_4634 ←	alpha/beta family hydrolase
RA	5,257,744	G→C	8.0%	P36A (CCG→GCG)	PP_4634 ←	alpha/beta family hydrolase
RA	5,257,745	G→C	7.3%	R35R (CGC→CGG)	PP_4634 ←	alpha/beta family hydrolase
RA	5,257,752	G→T	8.3%	P33H (CCC→CAC)	PP_4634 ←	alpha/beta family hydrolase
RA	5,257,904	T→C	5.6%	intergenic (‑55/+89)	PP_4634 ← / ← PP_4635	alpha/beta family hydrolase/trans‑2‑enoyl‑CoA reductase
RA	5,261,122	G→T	7.0%	P176Q (CCG→CAG)	PP_4637 ←	5‑methyltetrahydropteroyltriglutamate‑ homocysteine S‑methyltransferase family protein
RA	5,261,125	A→C	7.4%	L175R (CTG→CGG)	PP_4637 ←	5‑methyltetrahydropteroyltriglutamate‑ homocysteine S‑methyltransferase family protein
RA	5,273,087	C→G	8.8%	S62R (AGC→AGG)	rlmG →	ribosomal RNA large subunit methyltransferase G
RA	5,273,093	Δ1 bp	8.5%	coding (192/1125 nt)	rlmG →	ribosomal RNA large subunit methyltransferase G
RA	5,273,458	C→G	5.7%	A186G (GCC→GGC)	rlmG →	ribosomal RNA large subunit methyltransferase G
RA	5,287,894	G→C	7.8%	S158R (AGC→AGG)	PP_4660 ←	LysR family transcriptional regulator
RA	5,287,899	G→A	8.0%	R157C (CGC→TGC)	PP_4660 ←	LysR family transcriptional regulator
RA	5,287,904	T→C	8.1%	H155R (CAC→CGC)	PP_4660 ←	LysR family transcriptional regulator
RA	5,287,909	G→C	8.2%	S153R (AGC→AGG)	PP_4660 ←	LysR family transcriptional regulator
RA	5,289,835	A→T	5.7%	L180Q (CTG→CAG)	PP_4663 ←	transmembrane protein
RA	5,297,286	A→T	5.4%	L42H (CTC→CAC)	TpbB ←	diguanylate cyclase
RA	5,307,453	C→T	7.8%	intergenic (‑154/+32)	recC ← / ← PP_5SG	multifunctional ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease/ssDNA endonuclease recombinase subunit/5S ribosomal RNA
RA	5,307,459	T→C	8.6%	intergenic (‑160/+26)	recC ← / ← PP_5SG	multifunctional ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease/ssDNA endonuclease recombinase subunit/5S ribosomal RNA
RA	5,307,460	G→A	8.2%	intergenic (‑161/+25)	recC ← / ← PP_5SG	multifunctional ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease/ssDNA endonuclease recombinase subunit/5S ribosomal RNA
RA	5,307,466	A→G	8.8%	intergenic (‑167/+19)	recC ← / ← PP_5SG	multifunctional ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease/ssDNA endonuclease recombinase subunit/5S ribosomal RNA
RA	5,324,917	G→T	6.1%	Q501H (CAG→CAT)	PP_4684 →	kinase‑like domain‑containing protein
RA	5,324,930	A→C	5.7%	M506L (ATG→CTG)	PP_4684 →	kinase‑like domain‑containing protein
RA	5,325,559	T→A	7.7%	noncoding (133/149 nt)	PP_mr52 →	PrrF ncRNA
RA	5,329,444	T→A	6.5%	L10Q (CTG→CAG)	PP_4690 →	Rieske 2Fe‑2S family protein
RA	5,332,268	T→C	6.5%	intergenic (+3/‑46)	dksA → / → gluQ	RNA polymerase‑binding transcription factor DksA/glutamyl‑Q tRNA(Asp) synthetase
RA	5,332,293	C→G	6.3%	intergenic (+28/‑21)	dksA → / → gluQ	RNA polymerase‑binding transcription factor DksA/glutamyl‑Q tRNA(Asp) synthetase
RA	5,335,729	T→A	6.8%	L704Q (CTG→CAG)	PP_4695 →	two‑component system sensor histidine kinase
RA	5,338,086	A→G	7.6%	intergenic (+45/‑239)	PP_4696 → / → PP_mr53	nitrogen regulation protein NR(I)/CrcZ ncRNA
RA	5,338,098	C→G	8.2%	intergenic (+57/‑227)	PP_4696 → / → PP_mr53	nitrogen regulation protein NR(I)/CrcZ ncRNA
RA	5,338,101	C→G	8.0%	intergenic (+60/‑224)	PP_4696 → / → PP_mr53	nitrogen regulation protein NR(I)/CrcZ ncRNA
RA	5,338,677	T→C	8.3%	noncoding (353/395 nt)	PP_mr53 →	CrcZ ncRNA
RA	5,338,680	G→A	8.3%	noncoding (356/395 nt)	PP_mr53 →	CrcZ ncRNA
RA	5,344,509:1	+C	5.8%	intergenic (+36/‑142)	pgi‑II → / → acsA‑II	glucose 6‑phosphate isomerase/acetyl‑CoA synthetase
RA	5,344,509:2	+T	5.8%	intergenic (+36/‑142)	pgi‑II → / → acsA‑II	glucose 6‑phosphate isomerase/acetyl‑CoA synthetase
RA	5,344,515	C→G	5.2%	intergenic (+42/‑136)	pgi‑II → / → acsA‑II	glucose 6‑phosphate isomerase/acetyl‑CoA synthetase
RA	5,344,519	C→T	6.2%	intergenic (+46/‑132)	pgi‑II → / → acsA‑II	glucose 6‑phosphate isomerase/acetyl‑CoA synthetase
RA	5,344,528	A→G	6.0%	intergenic (+55/‑123)	pgi‑II → / → acsA‑II	glucose 6‑phosphate isomerase/acetyl‑CoA synthetase
RA	5,344,532	C→G	6.7%	intergenic (+59/‑119)	pgi‑II → / → acsA‑II	glucose 6‑phosphate isomerase/acetyl‑CoA synthetase
RA	5,344,537	Δ1 bp	6.3%	intergenic (+64/‑114)	pgi‑II → / → acsA‑II	glucose 6‑phosphate isomerase/acetyl‑CoA synthetase
RA	5,344,538	Δ1 bp	6.3%	intergenic (+65/‑113)	pgi‑II → / → acsA‑II	glucose 6‑phosphate isomerase/acetyl‑CoA synthetase
RA	5,352,025	G→T	14.6%	intergenic (‑230/+34)	PP_4707 ← / ← pnp	OsmY‑like protein/polyribonucleotide nucleotidyltransferase
RA	5,352,028	A→C	15.1%	intergenic (‑233/+31)	PP_4707 ← / ← pnp	OsmY‑like protein/polyribonucleotide nucleotidyltransferase
RA	5,359,108	T→A	5.9%	I404F (ATC→TTC)	nusA ←	transcription termination/antitermination factor L
RA	5,359,110	T→A	7.2%	D403V (GAC→GTC)	nusA ←	transcription termination/antitermination factor L
RA	5,359,112	T→A	5.9%	E402D (GAA→GAT)	nusA ←	transcription termination/antitermination factor L
RA	5,361,119	A→T	9.9%	intergenic (‑78/+23)	PP_t49 ← / ← PP_t48	tRNA‑Met/tRNA‑Leu
RA	5,361,120	A→T	9.7%	intergenic (‑79/+22)	PP_t49 ← / ← PP_t48	tRNA‑Met/tRNA‑Leu
RA	5,362,263	C→G	8.2%	V49L (GTG→CTG)	tpiA ←	triose phosphate isomerase
RA	5,362,264	C→G	8.2%	Q48H (CAG→CAC)	tpiA ←	triose phosphate isomerase
RA	5,368,718	G→T	6.9%	R14S (CGC→AGC)	greA ←	transcription elongation factor GreA
RA	5,368,719	A→C	6.7%	A13A (GCT→GCG)	greA ←	transcription elongation factor GreA
RA	5,377,746	C→A	8.6%	A176S (GCG→TCG)	grpE ←	heat shock protein GrpE
RA	5,377,749	T→G	8.8%	S175R (AGC→CGC)	grpE ←	heat shock protein GrpE
RA	5,378,931	C→G	5.9%	A156A (GCC→GCG)	recN →	DNA repair/recombination protein
RA	5,378,932	C→G	5.9%	R157G (CGC→GGC)	recN →	DNA repair/recombination protein
RA	5,381,315	T→C	9.3%	intergenic (+32/+33)	bamE → / ← PP_4732	outer membrane protein assembly factor BamE/hypothetical protein
RA	5,381,316	T→A	9.2%	intergenic (+33/+32)	bamE → / ← PP_4732	outer membrane protein assembly factor BamE/hypothetical protein
RA	5,381,317	G→A	9.4%	intergenic (+34/+31)	bamE → / ← PP_4732	outer membrane protein assembly factor BamE/hypothetical protein
RA	5,384,576	G→C	5.3%	G331A (GGC→GCC)	lldP →	L‑lactate permease
RA	5,388,924	C→A	5.6%	L796M (CTG→ATG)	dld2 →	D‑lactate dehydrogenase
RA	5,389,315	T→A	6.3%	L926Q (CTG→CAG)	dld2 →	D‑lactate dehydrogenase
RA	5,389,430	A→G	5.4%	intergenic (+81/‑239)	dld2 → / → PP_4738	D‑lactate dehydrogenase/hypothetical protein
RA	5,390,479	T→G	11.7%	intergenic (+520/‑202)	PP_4738 → / → PP_mr56	hypothetical protein/C4 ncRNA
RA	5,390,480	C→A	11.8%	intergenic (+521/‑201)	PP_4738 → / → PP_mr56	hypothetical protein/C4 ncRNA
RA	5,406,101	C→G	6.9%	A185A (GCG→GCC)	PP_4750 ←	amino acid ABC transporter permease
RA	5,406,104	C→G	7.4%	A184A (GCG→GCC)	PP_4750 ←	amino acid ABC transporter permease
RA	5,410,445	G→C	5.5%	A160G (GCC→GGC)	stcD ←	N‑methylproline demethylase
RA	5,417,431	C→T	11.5%	G101S (GGT→AGT)	gudD ←	bifunctional D‑glucarate dehydratase/L‑idarate epimerase
RA	5,417,434	C→G	10.8%	A100P (GCG→CCG)	gudD ←	bifunctional D‑glucarate dehydratase/L‑idarate epimerase
RA	5,417,437	A→G	10.5%	S99P (TCG→CCG)	gudD ←	bifunctional D‑glucarate dehydratase/L‑idarate epimerase
RA	5,418,564	G→A	5.6%	G185G (GGC→GGT)	PP_4758 ←	MFS transporter
RA	5,426,134	G→C	6.9%	G208R (GGC→CGC)	PP_4765 →	hypothetical protein
RA	5,426,138	G→C	6.8%	W209S (TGG→TCG) ‡	PP_4765 →	hypothetical protein
RA	5,426,139	G→C	8.7%	W209C (TGG→TGC) ‡	PP_4765 →	hypothetical protein
RA	5,426,143	G→C	7.6%	A211P (GCG→CCG)	PP_4765 →	hypothetical protein
RA	5,427,329	G→A	7.7%	I274I (ATC→ATT)	rhlE‑I ←	ATP‑dependent RNA helicase
RA	5,427,336	T→A	7.9%	D272V (GAC→GTC)	rhlE‑I ←	ATP‑dependent RNA helicase
RA	5,427,343	T→C	6.6%	N270D (AAT→GAT)	rhlE‑I ←	ATP‑dependent RNA helicase
RA	5,427,625	G→C	7.3%	L176V (CTG→GTG)	rhlE‑I ←	ATP‑dependent RNA helicase
RA	5,430,440	A→G	7.0%	intergenic (‑74/+87)	PP_4769 ← / ← PP_4770	hypothetical protein/hypothetical protein
RA	5,430,444	A→G	6.9%	intergenic (‑78/+83)	PP_4769 ← / ← PP_4770	hypothetical protein/hypothetical protein
RA	5,430,445:1	+A	7.1%	intergenic (‑79/+82)	PP_4769 ← / ← PP_4770	hypothetical protein/hypothetical protein
RA	5,430,452	Δ1 bp	6.9%	intergenic (‑86/+75)	PP_4769 ← / ← PP_4770	hypothetical protein/hypothetical protein
RA	5,430,454	C→T	6.9%	intergenic (‑88/+73)	PP_4769 ← / ← PP_4770	hypothetical protein/hypothetical protein
RA	5,430,458	C→T	7.8%	intergenic (‑92/+69)	PP_4769 ← / ← PP_4770	hypothetical protein/hypothetical protein
RA	5,440,411	T→C	5.9%	T155A (ACC→GCC)	amn ←	AMP nucleosidase
RA	5,441,738:1	+A	5.2%	coding (894/1653 nt)	PP_4780 ←	acyl‑CoA dehydrogenase
RA	5,441,743	Δ1 bp	5.2%	coding (889/1653 nt)	PP_4780 ←	acyl‑CoA dehydrogenase
RA	5,450,258	C→T	5.4%	Q30* (CAG→TAG)	ybeY →	endoribonuclease YbeY
RA	5,458,940:1	+A	13.8%	intergenic (+17/‑45)	leuS → / → PP_4795	leucine‑‑tRNA ligase/lipoprotein
RA	5,458,946	Δ1 bp	13.5%	intergenic (+23/‑39)	leuS → / → PP_4795	leucine‑‑tRNA ligase/lipoprotein
RA	5,459,608	T→G	9.1%	intergenic (+18/‑22)	PP_4795 → / → holA	lipoprotein/DNA polymerase III subunit delta
RA	5,459,609	C→A	9.1%	intergenic (+19/‑21)	PP_4795 → / → holA	lipoprotein/DNA polymerase III subunit delta
RA	5,462,441	Δ1 bp	5.2%	intergenic (+16/+18)	PP_4798 → / ← PP_4799	membrane‑bound lytic murein transglycosylase/muramoyltetrapeptide carboxypeptidase
RA	5,462,443:1	+A	5.2%	intergenic (+18/+16)	PP_4798 → / ← PP_4799	membrane‑bound lytic murein transglycosylase/muramoyltetrapeptide carboxypeptidase
RA	5,472,204	T→A	8.4%	K95M (AAG→ATG) ‡	rlmH ←	23S rRNA (pseudouridine(1915)‑N(3))‑methyltransferase RlmH
RA	5,472,205	T→A	8.4%	K95* (AAG→TAG) ‡	rlmH ←	23S rRNA (pseudouridine(1915)‑N(3))‑methyltransferase RlmH
RA	5,478,830	G→C	7.5%	I33M (ATC→ATG)	PP_4816 ←	hypothetical protein
RA	5,485,198	A→G	7.6%	intergenic (+56/‑91)	purH → / → purD	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase
RA	5,485,201	A→G	5.5%	intergenic (+59/‑88)	purH → / → purD	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase
RA	5,485,202	T→C	6.3%	intergenic (+60/‑87)	purH → / → purD	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase
RA	5,485,207	G→A	6.1%	intergenic (+65/‑82)	purH → / → purD	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase
RA	5,485,210	T→C	6.3%	intergenic (+68/‑79)	purH → / → purD	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase
RA	5,485,215	G→A	6.0%	intergenic (+73/‑74)	purH → / → purD	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase
RA	5,485,216	C→T	6.1%	intergenic (+74/‑73)	purH → / → purD	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase
RA	5,485,219	C→T	6.1%	intergenic (+77/‑70)	purH → / → purD	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase
RA	5,489,826:1	+C	6.5%	coding (260/597 nt)	PP_4825 →	MarC family membrane protein
RA	5,489,830	Δ1 bp	6.5%	coding (264/597 nt)	PP_4825 →	MarC family membrane protein
RA	5,503,183	C→A	9.1%	L29M (CTG→ATG) ‡	oprC →	copper receptor OprC
RA	5,503,184	T→G	8.7%	L29R (CTG→CGG) ‡	oprC →	copper receptor OprC
RA	5,503,190	C→G	9.7%	A31G (GCC→GGC)	oprC →	copper receptor OprC
RA	5,503,196	C→A	8.7%	P33H (CCT→CAT) ‡	oprC →	copper receptor OprC
RA	5,503,197	T→G	8.6%	P33P (CCT→CCG) ‡	oprC →	copper receptor OprC
RA	5,507,063	C→A	5.9%	P92P (CCC→CCA)	cycA →	D‑alanine/beta‑alanine/D‑serine/glycine permease
RA	5,507,064	T→G	6.3%	W93G (TGG→GGG)	cycA →	D‑alanine/beta‑alanine/D‑serine/glycine permease
RA	5,511,756	G→A	5.8%	L140L (CTG→CTA)	urtC →	urea ABC transporter permease
RA	5,520,695	C→G	5.1%	A231A (GCC→GCG)	PP_4853 →	DMT superfamily permease
RA	5,522,839	T→A	6.2%	intergenic (+25/+15)	PP_4856 → / ← yhjG	Dps family ferritin/protein YhjG
RA	5,522,840	T→A	6.1%	intergenic (+26/+14)	PP_4856 → / ← yhjG	Dps family ferritin/protein YhjG
RA	5,522,841	T→A	6.2%	intergenic (+27/+13)	PP_4856 → / ← yhjG	Dps family ferritin/protein YhjG
RA	5,522,842	T→A	5.8%	intergenic (+28/+12)	PP_4856 → / ← yhjG	Dps family ferritin/protein YhjG
RA	5,525,818	C→A	6.7%	intergenic (+60/‑63)	PP_4858 → / → PP_4859	hypothetical protein/TetR family transcriptional regulator
RA	5,525,821	T→G	6.6%	intergenic (+63/‑60)	PP_4858 → / → PP_4859	hypothetical protein/TetR family transcriptional regulator
RA	5,531,058	A→C	7.5%	R421R (CGT→CGG)	braE ←	high‑affinity branched‑chain amino acid ABC transporter permease BraE
RA	5,531,061	G→T	7.2%	I420I (ATC→ATA)	braE ←	high‑affinity branched‑chain amino acid ABC transporter permease BraE
RA	5,549,653	T→A	9.0%	intergenic (+18/‑154)	PP_t47 → / → PP_4881	tRNA‑Leu/iron ABC transporter substrate‑binding protein
RA	5,549,654	T→A	8.8%	intergenic (+19/‑153)	PP_t47 → / → PP_4881	tRNA‑Leu/iron ABC transporter substrate‑binding protein
RA	5,552,961	T→G	12.0%	intergenic (+576/+85)	PP_4882 → / ← PP_5717	iron ABC transporter permease/hypothetical protein
RA	5,552,962	T→A	11.8%	intergenic (+577/+84)	PP_4882 → / ← PP_5717	iron ABC transporter permease/hypothetical protein
RA	5,552,963	C→A	11.5%	intergenic (+578/+83)	PP_4882 → / ← PP_5717	iron ABC transporter permease/hypothetical protein
RA	5,554,974	C→T	6.8%	intergenic (‑31/+140)	PP_4886 ← / ← PP_4887	hypothetical protein/hypothetical protein
RA	5,559,538	C→T	6.1%	W337* (TGG→TAG) ‡	hisZ ←	ATP phosphoribosyltransferase regulatory subunit
RA	5,559,539	A→G	6.3%	W337R (TGG→CGG) ‡	hisZ ←	ATP phosphoribosyltransferase regulatory subunit
RA	5,560,216	A→T	5.9%	L111Q (CTG→CAG)	hisZ ←	ATP phosphoribosyltransferase regulatory subunit
RA	5,565,800	G→A	5.5%	H579H (CAC→CAT)	mutL ←	DNA mismatch repair protein MutL
RA	5,565,805	A→T	5.5%	C578S (TGC→AGC)	mutL ←	DNA mismatch repair protein MutL
RA	5,565,806	A→T	5.6%	A577A (GCT→GCA)	mutL ←	DNA mismatch repair protein MutL
RA	5,565,811	T→C	5.3%	M576V (ATG→GTG)	mutL ←	DNA mismatch repair protein MutL
RA	5,565,939	A→T	6.8%	I533N (ATT→AAT)	mutL ←	DNA mismatch repair protein MutL
RA	5,566,464	T→A	10.8%	Q358L (CAG→CTG)	mutL ←	DNA mismatch repair protein MutL
RA	5,566,467	T→A	11.0%	Q357L (CAG→CTG)	mutL ←	DNA mismatch repair protein MutL
RA	5,583,572	T→C	5.8%	P737P (CCA→CCG)	parC ←	DNA topoisomerase IV subunit A
RA	5,583,579	T→A	5.7%	K735M (AAG→ATG) ‡	parC ←	DNA topoisomerase IV subunit A
RA	5,583,580	T→A	5.9%	K735* (AAG→TAG) ‡	parC ←	DNA topoisomerase IV subunit A
RA	5,585,557	Δ1 bp	7.1%	coding (226/2259 nt)	parC ←	DNA topoisomerase IV subunit A
RA	5,585,562	A→T	6.6%	V74D (GTC→GAC)	parC ←	DNA topoisomerase IV subunit A
RA	5,585,566:1	+G	6.6%	coding (217/2259 nt)	parC ←	DNA topoisomerase IV subunit A
RA	5,602,094	A→G	5.2%	V480A (GTC→GCC)	PP_4924 ←	subtilase family serine protease
RA	5,602,097	T→A	5.1%	Q479L (CAG→CTG)	PP_4924 ←	subtilase family serine protease
RA	5,602,100	C→T	5.0%	G478D (GGC→GAC)	PP_4924 ←	subtilase family serine protease
RA	5,609,045	G→C	5.6%	R202G (CGC→GGC)	waaA ←	3‑deoxy‑D‑manno‑octulosonic acid transferase
RA	5,609,048	C→G	5.1%	E201Q (GAG→CAG)	waaA ←	3‑deoxy‑D‑manno‑octulosonic acid transferase
RA	5,609,051	G→C	5.5%	P200A (CCT→GCT)	waaA ←	3‑deoxy‑D‑manno‑octulosonic acid transferase
RA	5,610,105	C→G	75.8%	G154A (GGC→GCC)	PP_4929 ←	LysR family transcriptional regulator
RA	5,610,582	T→C	20.2%	intergenic (‑17/‑55)	PP_4929 ← / → emrE	LysR family transcriptional regulator/small multidrug resistance protein
RA	5,614,099	A→G	6.0%	intergenic (+30/+52)	PP_4933 → / ← hldE	hypothetical protein/bifunctional heptose 7‑phosphate kinase/heptose 1‑phosphate adenylyltransferase
RA	5,614,106	A→T	6.2%	intergenic (+37/+45)	PP_4933 → / ← hldE	hypothetical protein/bifunctional heptose 7‑phosphate kinase/heptose 1‑phosphate adenylyltransferase
RA	5,614,107	A→T	6.3%	intergenic (+38/+44)	PP_4933 → / ← hldE	hypothetical protein/bifunctional heptose 7‑phosphate kinase/heptose 1‑phosphate adenylyltransferase
RA	5,614,114	C→T	9.0%	intergenic (+45/+37)	PP_4933 → / ← hldE	hypothetical protein/bifunctional heptose 7‑phosphate kinase/heptose 1‑phosphate adenylyltransferase
RA	5,614,754	A→C	5.7%	I273M (ATT→ATG)	hldE ←	bifunctional heptose 7‑phosphate kinase/heptose 1‑phosphate adenylyltransferase
RA	5,614,757	G→T	5.4%	A272A (GCC→GCA)	hldE ←	bifunctional heptose 7‑phosphate kinase/heptose 1‑phosphate adenylyltransferase
RA	5,618,162	G→C	5.0%	R181G (CGT→GGT)	wzy ←	O‑antigen polymerase
RA	5,618,166	C→G	5.1%	R179R (CGG→CGC)	wzy ←	O‑antigen polymerase
RA	5,618,170	G→C	6.2%	P178R (CCT→CGT)	wzy ←	O‑antigen polymerase
RA	5,630,662	T→C	5.3%	G47G (GGT→GGC)	putA →	proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase
RA	5,630,663	G→A	6.1%	A48T (GCC→ACC)	putA →	proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase
RA	5,641,506	C→G	10.2%	S373C (TCC→TGC)	PP_4951 →	EmrB/QacA family drug resistance transporter
RA	5,641,511	C→G	10.2%	Q375E (CAG→GAG)	PP_4951 →	EmrB/QacA family drug resistance transporter
RA	5,650,841	G→C	9.9%	Q135E (CAG→GAG)	PP_4959 ←	diguanylate cyclase
RA	5,650,843	T→A	9.6%	D134V (GAC→GTC)	PP_4959 ←	diguanylate cyclase
RA	5,650,845	G→C	10.0%	L133L (CTC→CTG)	PP_4959 ←	diguanylate cyclase
RA	5,651,425	T→G	10.3%	intergenic (‑182/+31)	PP_4959 ← / ← fba	diguanylate cyclase/fructose‑bisphosphate aldolase
RA	5,651,428	C→A	9.5%	intergenic (‑185/+28)	PP_4959 ← / ← fba	diguanylate cyclase/fructose‑bisphosphate aldolase
RA	5,653,045	C→A	5.9%	intergenic (‑95/+66)	PP_4961 ← / ← PP_4962	lipoprotein/hypothetical protein
RA	5,655,677:1	+A	21.3%	intergenic (‑81/+71)	epd ← / ← tktA	D‑erythrose 4‑phosphate dehydrogenase/transketolase A
RA	5,655,682	T→G	27.3%	intergenic (‑86/+66)	epd ← / ← tktA	D‑erythrose 4‑phosphate dehydrogenase/transketolase A
RA	5,655,687	C→A	23.9%	intergenic (‑91/+61)	epd ← / ← tktA	D‑erythrose 4‑phosphate dehydrogenase/transketolase A
RA	5,655,692	Δ1 bp	19.4%	intergenic (‑96/+56)	epd ← / ← tktA	D‑erythrose 4‑phosphate dehydrogenase/transketolase A
RA	5,657,944	C→A	6.1%	intergenic (‑199/‑53)	tktA ← / → sahR	transketolase A/methionine metabolism transcriptional regulator
RA	5,657,945	T→G	6.3%	intergenic (‑200/‑52)	tktA ← / → sahR	transketolase A/methionine metabolism transcriptional regulator
RA	5,658,167	T→G	5.4%	H57Q (CAT→CAG)	sahR →	methionine metabolism transcriptional regulator
RA	5,658,173	C→T	5.1%	L59L (CTC→CTT)	sahR →	methionine metabolism transcriptional regulator
RA	5,658,174	A→G	5.2%	K60E (AAG→GAG)	sahR →	methionine metabolism transcriptional regulator
RA	5,658,180	C→A	5.1%	L62M (CTG→ATG)	sahR →	methionine metabolism transcriptional regulator
RA	5,658,771	G→T	5.4%	G259C (GGC→TGC)	sahR →	methionine metabolism transcriptional regulator
RA	5,658,774	A→C	5.5%	S260R (AGC→CGC)	sahR →	methionine metabolism transcriptional regulator
RA	5,659,735	T→A	5.4%	L243Q (CTG→CAG)	metK →	methionine adenosyltransferase
RA	5,659,737	A→T	5.3%	T244S (ACT→TCT) ‡	metK →	methionine adenosyltransferase
RA	5,659,739	T→A	5.3%	T244T (ACT→ACA) ‡	metK →	methionine adenosyltransferase
RA	5,660,233	G→T	12.2%	intergenic (+35/‑194)	metK → / → ligB	methionine adenosyltransferase/DNA ligase B
RA	5,660,236	A→C	12.4%	intergenic (+38/‑191)	metK → / → ligB	methionine adenosyltransferase/DNA ligase B
RA	5,661,466	T→G	8.3%	V347G (GTC→GGC)	ligB →	DNA ligase B
RA	5,661,468	A→T	8.3%	S348C (AGC→TGC) ‡	ligB →	DNA ligase B
RA	5,661,470	C→A	8.2%	S348R (AGC→AGA) ‡	ligB →	DNA ligase B
RA	5,667,309	G→T	6.3%	intergenic (+36/+35)	nhaP → / ← PP_4975	NhaP‑type Na+(K+)/H+ antiporter/acyl‑CoA thioesterase
RA	5,667,310	A→C	6.0%	intergenic (+37/+34)	nhaP → / ← PP_4975	NhaP‑type Na+(K+)/H+ antiporter/acyl‑CoA thioesterase
RA	5,672,556	C→G	6.6%	A252G (GCC→GGC)	PP_4979 →	substrate‑binding protein
RA	5,675,646	C→G	5.2%	G116A (GGC→GCC)	yceJ ←	iron‑regulated cytochrome b561
RA	5,685,956	G→C	7.6%	P331P (CCC→CCG) ‡	PP_4988 ←	signal transduction histidine kinase CheA/CheY‑like receiver
RA	5,685,958	G→C	7.3%	P331A (CCC→GCC) ‡	PP_4988 ←	signal transduction histidine kinase CheA/CheY‑like receiver
RA	5,685,965	G→C	6.9%	R328R (CGC→CGG) ‡	PP_4988 ←	signal transduction histidine kinase CheA/CheY‑like receiver
RA	5,685,967	G→C	7.2%	R328G (CGC→GGC) ‡	PP_4988 ←	signal transduction histidine kinase CheA/CheY‑like receiver
RA	5,687,673:1	+G	5.6%	coding (1349/2061 nt)	pilJ ←	twitching motility protein PilJ
RA	5,687,678	Δ1 bp	5.4%	coding (1344/2061 nt)	pilJ ←	twitching motility protein PilJ
RA	5,689,167:1	+C	5.0%	coding (421/555 nt)	pilI ←	twitching motility protein PilI
RA	5,696,623	A→G	7.7%	intergenic (+19/‑193)	pyrC' → / → hslV	dihydroorotase‑like protein/ATP‑dependent HslVU protease peptidase subunit
RA	5,696,624	C→T	6.0%	intergenic (+20/‑192)	pyrC' → / → hslV	dihydroorotase‑like protein/ATP‑dependent HslVU protease peptidase subunit
RA	5,698,210	A→C	7.4%	K263T (AAG→ACG)	hslU →	protease HslVU ATPase subunit
RA	5,698,213	G→T	7.1%	R264L (CGT→CTT)	hslU →	protease HslVU ATPase subunit
RA	5,701,276	G→C	5.6%	intergenic (+18/‑45)	phaA → / → phaB	poly(3‑hydroxyalkanoate) polymerase/poly(3‑hydroxyalkanoate) depolymerase
RA	5,701,278	C→G	5.4%	intergenic (+20/‑43)	phaA → / → phaB	poly(3‑hydroxyalkanoate) polymerase/poly(3‑hydroxyalkanoate) depolymerase
RA	5,701,283	C→G	5.4%	intergenic (+25/‑38)	phaA → / → phaB	poly(3‑hydroxyalkanoate) polymerase/poly(3‑hydroxyalkanoate) depolymerase
RA	5,701,285	G→C	5.5%	intergenic (+27/‑36)	phaA → / → phaB	poly(3‑hydroxyalkanoate) polymerase/poly(3‑hydroxyalkanoate) depolymerase
RA	5,706,643	T→A	8.4%	L202Q (CTG→CAG)	PP_5009 →	hypothetical protein
RA	5,726,860:1	+G	14.6%	coding (162/2574 nt)	opgH ←	glucans biosynthesis glucosyltransferase H
RA	5,726,865	Δ1 bp	14.6%	coding (157/2574 nt)	opgH ←	glucans biosynthesis glucosyltransferase H
RA	5,732,025	A→T	5.8%	L196* (TTG→TAG) ‡	hutI ←	imidazolonepropionase
RA	5,732,026	A→T	5.8%	L196M (TTG→ATG) ‡	hutI ←	imidazolonepropionase
RA	5,734,075	T→C	5.6%	intergenic (‑45/+112)	proY ← / ← hutH	proline (histidine) APC transporter/histidine ammonia‑lyase
RA	5,734,080	C→G	5.7%	intergenic (‑50/+107)	proY ← / ← hutH	proline (histidine) APC transporter/histidine ammonia‑lyase
RA	5,734,083	Δ1 bp	5.4%	intergenic (‑53/+104)	proY ← / ← hutH	proline (histidine) APC transporter/histidine ammonia‑lyase
RA	5,734,085	C→G	5.9%	intergenic (‑55/+102)	proY ← / ← hutH	proline (histidine) APC transporter/histidine ammonia‑lyase
RA	5,734,152	C→T	7.2%	intergenic (‑122/+35)	proY ← / ← hutH	proline (histidine) APC transporter/histidine ammonia‑lyase
RA	5,736,578:1	+G	6.2%	coding (924/1674 nt)	hutU ←	urocanate hydratase
RA	5,736,589	Δ1 bp	6.2%	coding (913/1674 nt)	hutU ←	urocanate hydratase
RA	5,740,513	G→A	15.8%	intergenic (+22/+49)	hutF → / ← PP_5037	formiminoglutamate deiminase/lipocalin family lipoprotein
RA	5,740,523	T→G	21.4%	intergenic (+32/+39)	hutF → / ← PP_5037	formiminoglutamate deiminase/lipocalin family lipoprotein
RA	5,740,526	A→T	20.8%	intergenic (+35/+36)	hutF → / ← PP_5037	formiminoglutamate deiminase/lipocalin family lipoprotein
RA	5,740,527	A→T	20.3%	intergenic (+36/+35)	hutF → / ← PP_5037	formiminoglutamate deiminase/lipocalin family lipoprotein
RA	5,740,530	C→A	19.6%	intergenic (+39/+32)	hutF → / ← PP_5037	formiminoglutamate deiminase/lipocalin family lipoprotein
RA	5,740,540	T→C	14.6%	intergenic (+49/+22)	hutF → / ← PP_5037	formiminoglutamate deiminase/lipocalin family lipoprotein
RA	5,741,711	C→T	5.3%	A167T (GCC→ACC)	PP_5039 ←	hypothetical protein
RA	5,741,940	G→C	5.3%	D90E (GAC→GAG)	PP_5039 ←	hypothetical protein
RA	5,741,946	C→T	5.2%	E88E (GAG→GAA)	PP_5039 ←	hypothetical protein
RA	5,741,965	T→C	5.1%	D82G (GAC→GGC)	PP_5039 ←	hypothetical protein
RA	5,742,158	T→C	6.1%	S18G (AGT→GGT)	PP_5039 ←	hypothetical protein
RA	5,742,159	G→A	5.1%	T17T (ACC→ACT)	PP_5039 ←	hypothetical protein
RA	5,743,387	G→A	7.2%	intergenic (‑164/+83)	fbp ← / ← glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase
RA	5,743,391	T→C	9.2%	intergenic (‑168/+79)	fbp ← / ← glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase
RA	5,743,686	G→A	7.1%	Y745Y (TAC→TAT) ‡	glgP ←	glycogen phosphorylase
RA	5,743,687	T→C	7.1%	Y745C (TAC→TGC) ‡	glgP ←	glycogen phosphorylase
RA	5,743,903	A→C	6.7%	L673R (CTC→CGC)	glgP ←	glycogen phosphorylase
RA	5,743,906	G→T	6.9%	A672E (GCG→GAG)	glgP ←	glycogen phosphorylase
RA	5,750,454	C→T	7.0%	V389M (GTG→ATG)	thiI ←	tRNA sulfurtransferase
RA	5,750,455	A→G	6.9%	H388H (CAT→CAC)	thiI ←	tRNA sulfurtransferase
RA	5,753,541	T→G	11.8%	intergenic (+46/‑320)	glnA → / → glnL	glutamine synthetase/two‑component system sensor histidine kinase/phosphatase GlnL/GlnG
RA	5,753,542	C→A	11.7%	intergenic (+47/‑319)	glnA → / → glnL	glutamine synthetase/two‑component system sensor histidine kinase/phosphatase GlnL/GlnG
RA	5,764,854	C→T	5.7%	A260V (GCC→GTC)	ctpA →	carboxy‑terminal‑processing protease
RA	5,783,375	C→G	6.3%	V598V (GTC→GTG)	kefA →	intermediate mechanosensitive channel protein
RA	5,783,376	C→G	6.3%	H599D (CAC→GAC)	kefA →	intermediate mechanosensitive channel protein
RA	5,790,189	G→T	7.2%	intergenic (+12/+56)	ynfM → / ← PP_5073	efflux transporter/hypothetical protein
RA	5,790,193	G→A	7.1%	intergenic (+16/+52)	ynfM → / ← PP_5073	efflux transporter/hypothetical protein
RA	5,790,199	A→T	8.1%	intergenic (+22/+46)	ynfM → / ← PP_5073	efflux transporter/hypothetical protein
RA	5,790,206	A→G	6.3%	intergenic (+29/+39)	ynfM → / ← PP_5073	efflux transporter/hypothetical protein
RA	5,790,207	C→G	6.5%	intergenic (+30/+38)	ynfM → / ← PP_5073	efflux transporter/hypothetical protein
RA	5,790,208	C→T	6.8%	intergenic (+31/+37)	ynfM → / ← PP_5073	efflux transporter/hypothetical protein
RA	5,790,215	A→T	6.2%	intergenic (+38/+30)	ynfM → / ← PP_5073	efflux transporter/hypothetical protein
RA	5,790,676	A→T	5.3%	intergenic (‑24/+33)	PP_5073 ← / ← hemE	hypothetical protein/uroporphyrinogen decarboxylase
RA	5,790,681	A→T	5.3%	intergenic (‑29/+28)	PP_5073 ← / ← hemE	hypothetical protein/uroporphyrinogen decarboxylase
RA	5,793,056	A→C	6.0%	C111G (TGC→GGC)	gltD ←	glutamate synthase subunit beta
RA	5,793,057	G→T	5.9%	A110A (GCC→GCA)	gltD ←	glutamate synthase subunit beta
RA	5,797,363	A→C	5.5%	L198R (CTC→CGC)	gltB ←	L‑glutamate synthase subunit alpha
RA	5,798,249	C→T	10.1%	intergenic (‑294/+80)	gltB ← / ← PP_5077	L‑glutamate synthase subunit alpha/hypothetical protein
RA	5,798,254	T→C	10.3%	intergenic (‑299/+75)	gltB ← / ← PP_5077	L‑glutamate synthase subunit alpha/hypothetical protein
RA	5,798,257	G→A	10.4%	intergenic (‑302/+72)	gltB ← / ← PP_5077	L‑glutamate synthase subunit alpha/hypothetical protein
RA	5,815,587	C→T	14.7%	intergenic (+15/+76)	PP_5090 → / ← PP_5091	cell division protein/membrane protein
RA	5,815,592	G→T	16.0%	intergenic (+20/+71)	PP_5090 → / ← PP_5091	cell division protein/membrane protein
RA	5,815,595	A→C	15.7%	intergenic (+23/+68)	PP_5090 → / ← PP_5091	cell division protein/membrane protein
RA	5,815,600	A→G	16.5%	intergenic (+28/+63)	PP_5090 → / ← PP_5091	cell division protein/membrane protein
RA	5,816,587	C→G	8.2%	A114G (GCC→GGC)	PP_5092 →	NLP/P60 protein
RA	5,816,909	A→G	5.6%	intergenic (+39/+90)	PP_5092 → / ← pilT	NLP/P60 protein/twitching motility protein
RA	5,816,983	A→G	11.3%	intergenic (+113/+16)	PP_5092 → / ← pilT	NLP/P60 protein/twitching motility protein
RA	5,821,953	T→A	11.8%	L173Q (CTG→CAG)	metW →	methionine biosynthesis protein MetW
RA	5,827,774	G→C	8.3%	A211P (GCC→CCC)	mtgA →	monofunctional biosynthetic peptidoglycan transglycosylase
RA	5,827,810	G→C	8.2%	G223R (GGG→CGG) ‡	mtgA →	monofunctional biosynthetic peptidoglycan transglycosylase
RA	5,827,811	G→C	8.2%	G223A (GGG→GCG) ‡	mtgA →	monofunctional biosynthetic peptidoglycan transglycosylase
RA	5,828,010	C→G	6.1%	intergenic (+156/+43)	mtgA → / ← rpoH	monofunctional biosynthetic peptidoglycan transglycosylase/RNA polymerase factor sigma‑32
RA	5,828,011	A→G	6.1%	intergenic (+157/+42)	mtgA → / ← rpoH	monofunctional biosynthetic peptidoglycan transglycosylase/RNA polymerase factor sigma‑32
RA	5,828,015	C→T	5.9%	intergenic (+161/+38)	mtgA → / ← rpoH	monofunctional biosynthetic peptidoglycan transglycosylase/RNA polymerase factor sigma‑32
RA	5,828,018	A→G	6.8%	intergenic (+164/+35)	mtgA → / ← rpoH	monofunctional biosynthetic peptidoglycan transglycosylase/RNA polymerase factor sigma‑32
RA	5,828,022	C→T	5.9%	intergenic (+168/+31)	mtgA → / ← rpoH	monofunctional biosynthetic peptidoglycan transglycosylase/RNA polymerase factor sigma‑32
RA	5,828,023	C→G	5.9%	intergenic (+169/+30)	mtgA → / ← rpoH	monofunctional biosynthetic peptidoglycan transglycosylase/RNA polymerase factor sigma‑32
RA	5,829,231	C→G	7.4%	A272P (GCA→CCA)	ftsX ←	cell division protein FtsX
RA	5,829,234	C→G	7.4%	G271R (GGC→CGC)	ftsX ←	cell division protein FtsX
RA	5,839,742	T→A	7.1%	intergenic (+63/+40)	yheT → / ← sseA	putative hydrolase/3‑mercaptopyruvate sulfurtransferase
RA	5,846,014	A→G	10.5%	intergenic (+30/+61)	yfhL → / ← mutM	4Fe‑4S cluster‑containing protein/formamidopyrimidine‑DNA glycosylase
RA	5,846,019	G→A	10.1%	intergenic (+35/+56)	yfhL → / ← mutM	4Fe‑4S cluster‑containing protein/formamidopyrimidine‑DNA glycosylase
RA	5,846,028	T→C	10.3%	intergenic (+44/+47)	yfhL → / ← mutM	4Fe‑4S cluster‑containing protein/formamidopyrimidine‑DNA glycosylase
RA	5,846,033	C→T	10.3%	intergenic (+49/+42)	yfhL → / ← mutM	4Fe‑4S cluster‑containing protein/formamidopyrimidine‑DNA glycosylase
RA	5,846,239	T→C	7.7%	T217A (ACC→GCC)	mutM ←	formamidopyrimidine‑DNA glycosylase
RA	5,846,246	G→A	7.2%	G214G (GGC→GGT)	mutM ←	formamidopyrimidine‑DNA glycosylase
RA	5,846,253	T→G	6.5%	E212A (GAG→GCG)	mutM ←	formamidopyrimidine‑DNA glycosylase
RA	5,853,438	A→G	6.9%	W119R (TGG→CGG)	pchP ←	phosphoethanolamine/phosphocholine phosphatase
RA	5,853,439	C→T	6.9%	P118P (CCG→CCA)	pchP ←	phosphoethanolamine/phosphocholine phosphatase
RA	5,854,674	A→C	6.5%	E213A (GAG→GCG)	tcyP →	sodium/cystine symporter
RA	5,854,677	G→T	6.9%	R214L (CGC→CTC)	tcyP →	sodium/cystine symporter
RA	5,857,746	Δ1 bp	6.1%	coding (239/1371 nt)	PP_5134 →	hypothetical protein
RA	5,857,750:1	+T	6.1%	coding (243/1371 nt)	PP_5134 →	hypothetical protein
RA	5,857,758	A→C	5.8%	E84A (GAG→GCG) ‡	PP_5134 →	hypothetical protein
RA	5,857,759	G→T	6.4%	E84D (GAG→GAT) ‡	PP_5134 →	hypothetical protein
RA	5,866,752	G→T	15.1%	intergenic (+19/+38)	PP_5140 → / ← thyA	MerR family transcriptional regulator/thymidylate synthase
RA	5,866,753	A→C	14.8%	intergenic (+20/+37)	PP_5140 → / ← thyA	MerR family transcriptional regulator/thymidylate synthase
RA	5,867,789:1	+C	16.8%	intergenic (‑28/+24)	thyA ← / ← lgt	thymidylate synthase/prolipoprotein diacylglyceryl transferase
RA	5,867,794	Δ1 bp	15.8%	intergenic (‑33/+19)	thyA ← / ← lgt	thymidylate synthase/prolipoprotein diacylglyceryl transferase
RA	5,874,875	G→T	6.3%	S451* (TCG→TAG) ‡	ilvA‑II ←	threonine deaminase
RA	5,874,876	A→C	6.3%	S451A (TCG→GCG) ‡	ilvA‑II ←	threonine deaminase
RA	5,883,651	C→G	9.3%	A60G (GCC→GGC)	PP_5157 →	hypothetical protein
RA	5,886,820	C→G	5.6%	W84C (TGG→TGC)	PP_5161 ←	lysophospholipase
RA	5,886,825	C→G	6.0%	A83P (GCA→CCA)	PP_5161 ←	lysophospholipase
RA	5,890,847	A→C	7.3%	intergenic (+79/+41)	PP_5164 → / ← plpB	penicillin amidase family protein/NLPA lipoprotein
RA	5,890,848	A→T	7.4%	intergenic (+80/+40)	PP_5164 → / ← plpB	penicillin amidase family protein/NLPA lipoprotein
RA	5,890,849	G→T	7.2%	intergenic (+81/+39)	PP_5164 → / ← plpB	penicillin amidase family protein/NLPA lipoprotein
RA	5,897,826	A→G	6.5%	intergenic (‑170/+64)	PP_5172 ← / ← PP_5173	hypothetical protein/RND family transporter
RA	5,897,829	G→A	6.6%	intergenic (‑173/+61)	PP_5172 ← / ← PP_5173	hypothetical protein/RND family transporter
RA	5,897,834	C→G	5.8%	intergenic (‑178/+56)	PP_5172 ← / ← PP_5173	hypothetical protein/RND family transporter
RA	5,897,835	G→C	5.9%	intergenic (‑179/+55)	PP_5172 ← / ← PP_5173	hypothetical protein/RND family transporter
RA	5,897,838	G→C	6.2%	intergenic (‑182/+52)	PP_5172 ← / ← PP_5173	hypothetical protein/RND family transporter
RA	5,897,839	C→G	5.7%	intergenic (‑183/+51)	PP_5172 ← / ← PP_5173	hypothetical protein/RND family transporter
RA	5,897,844	T→C	5.8%	intergenic (‑188/+46)	PP_5172 ← / ← PP_5173	hypothetical protein/RND family transporter
RA	5,897,847	C→T	5.9%	intergenic (‑191/+43)	PP_5172 ← / ← PP_5173	hypothetical protein/RND family transporter
RA	5,903,008	T→C	5.0%	T29A (ACA→GCA)	PP_5175 ←	HlyD family secretion protein
RA	5,903,220	G→T	14.5%	intergenic (‑128/‑140)	PP_5175 ← / → PP_5176	HlyD family secretion protein/hypothetical protein
RA	5,903,221	A→C	15.5%	intergenic (‑129/‑139)	PP_5175 ← / → PP_5176	HlyD family secretion protein/hypothetical protein
RA	5,903,887	G→A	6.0%	intergenic (+87/+20)	PP_5176 → / ← spuH	hypothetical protein/spermidine/putrescine ABC transporter permease
RA	5,906,204	G→A	5.9%	T218I (ACC→ATC) ‡	spuF ←	spermidine/putrescine ABC transporter ATP binding protein
RA	5,906,205	T→C	5.9%	T218A (ACC→GCC) ‡	spuF ←	spermidine/putrescine ABC transporter ATP binding protein
JC	5,912,986	Δ42 bp	12.1%	coding (199‑240/1377 nt)	spuI →	glutamylpolyamine synthetase
RA	5,913,430	G→A	14.7%	A215T (GCG→ACG)	spuI →	glutamylpolyamine synthetase
RA	5,913,679	Δ1 bp	7.2%	coding (892/1377 nt)	spuI →	glutamylpolyamine synthetase
RA	5,913,680	Δ1 bp	7.2%	coding (893/1377 nt)	spuI →	glutamylpolyamine synthetase
JC	5,914,029	Δ78 bp	18.9%	coding (1242‑1319/1377 nt)	spuI →	glutamylpolyamine synthetase
RA	5,914,180	C→T	10.7%	intergenic (+16/+137)	spuI → / ← argA	glutamylpolyamine synthetase/amino acid N‑acetyltransferase
RA	5,914,182	C→G	10.9%	intergenic (+18/+135)	spuI → / ← argA	glutamylpolyamine synthetase/amino acid N‑acetyltransferase
RA	5,914,184	A→G	10.8%	intergenic (+20/+133)	spuI → / ← argA	glutamylpolyamine synthetase/amino acid N‑acetyltransferase
RA	5,920,559	C→T	5.6%	V363V (GTC→GTT)	PP_5190 →	type II secretion system protein
RA	5,920,560	A→G	5.4%	N364D (AAC→GAC)	PP_5190 →	type II secretion system protein
RA	5,923,762	A→C	6.1%	L242R (CTG→CGG) ‡	gcvP‑II ←	glycine dehydrogenase
RA	5,923,763	G→T	6.4%	L242M (CTG→ATG) ‡	gcvP‑II ←	glycine dehydrogenase
RA	5,933,182	C→T	5.3%	R92Q (CGG→CAG)	pepP ←	proline aminopeptidase P II
RA	5,935,580	C→T	5.3%	A182V (GCC→GTC)	fau →	5‑formyltetrahydrofolate cyclo‑ligase
RA	5,950,028	G→C	5.0%	G230A (GGC→GCC)	ppx →	exopolyphosphatase
RA	5,951,645	T→C	14.4%	Q456Q (CAA→CAG)	ppk ←	polyphosphate kinase
RA	5,951,650	G→A	15.1%	L455L (CTG→TTG)	ppk ←	polyphosphate kinase
RA	5,961,105	C→T	5.0%	P58L (CCC→CTC)	PP_5226 →	Lppl family lipoprotein
RA	5,961,684	T→A	6.7%	I175N (ATT→AAT)	lysA‑II →	diaminopimelate decarboxylase
RA	5,961,687	C→G	6.0%	A176G (GCC→GGC)	lysA‑II →	diaminopimelate decarboxylase
RA	5,963,902	T→G	7.4%	Y216D (TAT→GAT)	PP_5229 →	hypothetical protein
RA	5,963,907	C→A	6.1%	I217I (ATC→ATA)	PP_5229 →	hypothetical protein
RA	5,966,388	A→T	5.7%	intergenic (‑401/+29)	PP_5232 ← / ← amtB	hypothetical protein/ammonium transporter AmtB
RA	5,966,389	A→T	5.7%	intergenic (‑402/+28)	PP_5232 ← / ← amtB	hypothetical protein/ammonium transporter AmtB
RA	5,978,158	T→A	8.5%	D9V (GAC→GTC)	PP_5240 ←	two‑component system response regulator
RA	5,984,466	G→A	5.7%	intergenic (+6/+83)	PP_5242 → / ← ycaC‑II	GAF domain‑containing sensor histidine kinase/putative hydrolase
RA	5,984,468	C→T	6.8%	intergenic (+8/+81)	PP_5242 → / ← ycaC‑II	GAF domain‑containing sensor histidine kinase/putative hydrolase
RA	5,984,492	T→C	10.7%	intergenic (+32/+57)	PP_5242 → / ← ycaC‑II	GAF domain‑containing sensor histidine kinase/putative hydrolase
RA	5,984,498	G→A	9.7%	intergenic (+38/+51)	PP_5242 → / ← ycaC‑II	GAF domain‑containing sensor histidine kinase/putative hydrolase
RA	5,984,500	T→C	8.8%	intergenic (+40/+49)	PP_5242 → / ← ycaC‑II	GAF domain‑containing sensor histidine kinase/putative hydrolase
RA	5,984,503	G→A	10.7%	intergenic (+43/+46)	PP_5242 → / ← ycaC‑II	GAF domain‑containing sensor histidine kinase/putative hydrolase
RA	5,984,505	T→C	10.5%	intergenic (+45/+44)	PP_5242 → / ← ycaC‑II	GAF domain‑containing sensor histidine kinase/putative hydrolase
RA	5,984,511	G→A	8.7%	intergenic (+51/+38)	PP_5242 → / ← ycaC‑II	GAF domain‑containing sensor histidine kinase/putative hydrolase
RA	5,988,865	G→A	20.9%	intergenic (+103/‑443)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,875	T→C	26.3%	intergenic (+113/‑433)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,880	C→T	24.1%	intergenic (+118/‑428)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,881	G→T	24.1%	intergenic (+119/‑427)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,882	C→T	24.3%	intergenic (+120/‑426)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,885	A→G	23.0%	intergenic (+123/‑423)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,891	G→C	23.5%	intergenic (+129/‑417)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,893	C→G	23.5%	intergenic (+131/‑415)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,896	C→T	24.4%	intergenic (+134/‑412)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,900	C→G	25.3%	intergenic (+138/‑408)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,904	C→T	25.5%	intergenic (+142/‑404)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,906	C→T	25.7%	intergenic (+144/‑402)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,945	C→A	35.1%	intergenic (+183/‑363)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,950	C→T	33.8%	intergenic (+188/‑358)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,951	A→G	34.4%	intergenic (+189/‑357)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,961	T→C	32.2%	intergenic (+199/‑347)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,967	Δ1 bp	30.3%	intergenic (+205/‑341)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,997,245:1	+G	19.4%	intergenic (‑158/+42)	PP_5252 ← / ← PP_5253	hypothetical protein/arylesterase
RA	5,997,250	Δ1 bp	18.2%	intergenic (‑163/+37)	PP_5252 ← / ← PP_5253	hypothetical protein/arylesterase
RA	5,999,429	A→G	5.9%	intergenic (‑228/‑93)	ycaC‑IV ← / → PP_5256	putative hydrolase/cyclic nucleotide‑binding protein
RA	5,999,430	A→T	5.9%	intergenic (‑229/‑92)	ycaC‑IV ← / → PP_5256	putative hydrolase/cyclic nucleotide‑binding protein
RA	5,999,432	T→C	7.5%	intergenic (‑231/‑90)	ycaC‑IV ← / → PP_5256	putative hydrolase/cyclic nucleotide‑binding protein
RA	5,999,433:1	+C	5.7%	intergenic (‑232/‑89)	ycaC‑IV ← / → PP_5256	putative hydrolase/cyclic nucleotide‑binding protein
RA	5,999,440	G→A	5.8%	intergenic (‑239/‑82)	ycaC‑IV ← / → PP_5256	putative hydrolase/cyclic nucleotide‑binding protein
RA	6,005,043	T→G	13.7%	intergenic (+25/‑151)	PP_5259 → / → ydcJ	LysR family transcriptional regulator/metalloprotein
RA	6,005,050	G→C	15.9%	intergenic (+32/‑144)	PP_5259 → / → ydcJ	LysR family transcriptional regulator/metalloprotein
RA	6,005,053	A→T	16.1%	intergenic (+35/‑141)	PP_5259 → / → ydcJ	LysR family transcriptional regulator/metalloprotein
RA	6,005,056	G→C	14.5%	intergenic (+38/‑138)	PP_5259 → / → ydcJ	LysR family transcriptional regulator/metalloprotein
RA	6,005,063	C→A	12.7%	intergenic (+45/‑131)	PP_5259 → / → ydcJ	LysR family transcriptional regulator/metalloprotein
RA	6,006,594	T→C	8.3%	intergenic (+6/+93)	ydcJ → / ← PP_5261	metalloprotein/LysR family transcriptional regulator
RA	6,016,828	A→G	5.9%	intergenic (‑88/+139)	PP_5728 ← / ← PP_5267	rhs repeat‑associated core domain‑containing protein/cytochrome c5
RA	6,016,833	C→G	6.5%	intergenic (‑93/+134)	PP_5728 ← / ← PP_5267	rhs repeat‑associated core domain‑containing protein/cytochrome c5
RA	6,016,838	C→T	6.5%	intergenic (‑98/+129)	PP_5728 ← / ← PP_5267	rhs repeat‑associated core domain‑containing protein/cytochrome c5
RA	6,023,215	G→A	8.6%	intergenic (+74/+70)	PP_5273 → / ← PP_5274	oxidoreductase/hypothetical protein
RA	6,023,216	T→C	8.8%	intergenic (+75/+69)	PP_5273 → / ← PP_5274	oxidoreductase/hypothetical protein
RA	6,027,278	A→T	9.2%	F212Y (TTC→TAC) ‡	PP_5277 ←	MFS transporter
RA	6,027,279	A→T	8.3%	F212I (TTC→ATC) ‡	PP_5277 ←	MFS transporter
RA	6,032,844	Δ1 bp	6.2%	intergenic (+52/+84)	dppA‑IV → / ← PP_5284	dipeptide transport protein/hypothetical protein
RA	6,039,292	C→T	5.5%	intergenic (‑256/+38)	PP_5290 ← / ← pyrE	transposase/orotate phosphoribosyltransferase
RA	6,039,296	G→T	5.4%	intergenic (‑260/+34)	PP_5290 ← / ← pyrE	transposase/orotate phosphoribosyltransferase
RA	6,039,297	A→C	5.5%	intergenic (‑261/+33)	PP_5290 ← / ← pyrE	transposase/orotate phosphoribosyltransferase
RA	6,039,301	A→G	5.4%	intergenic (‑265/+29)	PP_5290 ← / ← pyrE	transposase/orotate phosphoribosyltransferase
RA	6,040,850	T→A	5.4%	intergenic (+19/+15)	PP_5292 → / ← PP_5293	catabolite repression control protein/hypothetical protein
RA	6,043,722	T→A	7.8%	intergenic (+18/+16)	gmk → / ← PP_5297	deoxyguanylate kinase/guanylate kinase/amino acid transporter
RA	6,044,296	A→G	9.3%	S350S (AGT→AGC)	PP_5297 ←	amino acid transporter
RA	6,044,305	C→T	9.0%	V347V (GTG→GTA)	PP_5297 ←	amino acid transporter
RA	6,049,348	G→A	6.7%	V52M (GTG→ATG) ‡	spoT →	bifunctional (p)ppGpp synthase/hydrolase
RA	6,049,349	T→C	6.7%	V52A (GTG→GCG) ‡	spoT →	bifunctional (p)ppGpp synthase/hydrolase
RA	6,049,498	A→T	7.5%	K102* (AAG→TAG) ‡	spoT →	bifunctional (p)ppGpp synthase/hydrolase
RA	6,049,499	A→T	7.6%	K102M (AAG→ATG) ‡	spoT →	bifunctional (p)ppGpp synthase/hydrolase
RA	6,050,543	C→G	5.5%	P450R (CCG→CGG)	spoT →	bifunctional (p)ppGpp synthase/hydrolase
RA	6,050,942	T→C	6.8%	V583A (GTC→GCC)	spoT →	bifunctional (p)ppGpp synthase/hydrolase
RA	6,050,960	G→A	5.7%	G589D (GGC→GAC)	spoT →	bifunctional (p)ppGpp synthase/hydrolase
RA	6,053,758	T→A	6.6%	W16R (TGG→AGG)	exbB →	biopolymer transport protein ExbB
RA	6,060,501	T→G	5.6%	intergenic (+81/+100)	PP_5311 → / ← PP_5312	signal transduction protein/hypothetical protein
RA	6,067,254	G→C	5.8%	intergenic (+14/‑160)	phoR → / → PP_5322	two‑component system sensor histidine kinase/metal ion transporter
RA	6,070,833	A→T	8.4%	intergenic (‑133/+30)	PP_5324 ← / ← phoU	two‑component system response regulator/phosphate transport‑associated protein
RA	6,070,834	A→T	8.4%	intergenic (‑134/+29)	PP_5324 ← / ← phoU	two‑component system response regulator/phosphate transport‑associated protein
RA	6,075,803	G→C	5.3%	A272G (GCC→GGC)	PP_5328 ←	phosphate ABC transporter permease
RA	6,076,147	G→T	5.5%	G157G (GGC→GGA)	PP_5328 ←	phosphate ABC transporter permease
RA	6,076,151	T→A	5.3%	N156I (AAT→ATT)	PP_5328 ←	phosphate ABC transporter permease
RA	6,076,155	A→C	5.3%	S155A (TCC→GCC)	PP_5328 ←	phosphate ABC transporter permease
RA	6,078,476	A→C	5.6%	L269R (CTG→CGG) ‡	PP_5330 ←	MFS transporter
RA	6,078,477	G→T	5.3%	L269M (CTG→ATG) ‡	PP_5330 ←	MFS transporter
RA	6,079,682	G→C	5.1%	D14H (GAC→CAC)	PP_5331 →	acyl‑CoA thioesterase
RA	6,081,044	T→A	16.6%	intergenic (+35/+27)	PP_5332 → / ← PP_5333	hypothetical protein/hypothetical protein
RA	6,081,045	T→A	16.7%	intergenic (+36/+26)	PP_5332 → / ← PP_5333	hypothetical protein/hypothetical protein
RA	6,090,000	T→A	6.3%	intergenic (+19/+13)	potF‑IV → / ← PP_5342	putrescine‑binding protein/GntR family transcriptional regulator
RA	6,090,001	T→A	6.8%	intergenic (+20/+12)	potF‑IV → / ← PP_5342	putrescine‑binding protein/GntR family transcriptional regulator
RA	6,091,750	T→G	5.7%	L40R (CTG→CGG)	PP_5343 →	putative Transcriptional regulator
RA	6,091,753	C→A	5.8%	P41Q (CCG→CAG)	PP_5343 →	putative Transcriptional regulator
RA	6,104,109	T→A	5.3%	intergenic (+31/‑83)	PP_5353 → / → PP_5354	hypothetical protein/hypothetical protein
RA	6,104,110	T→A	5.4%	intergenic (+32/‑82)	PP_5353 → / → PP_5354	hypothetical protein/hypothetical protein
RA	6,108,391	G→C	6.6%	W23C (TGG→TGC)	PP_5358 →	hypothetical protein
RA	6,111,244	G→C	5.7%	P108A (CCA→GCA)	PP_5361 ←	protein P47K
RA	6,112,033	T→A	8.6%	H118Q (CAT→CAA)	PP_5362 →	hypothetical protein
RA	6,116,752	G→A	5.3%	R302H (CGT→CAT)	lpd →	dihydrolipoyl dehydrogenase
RA	6,125,913	G→T	7.5%	G218W (GGG→TGG)	PP_5374 →	choline/carnitine/betaine transporter family protein
RA	6,125,918	G→C	7.2%	L219L (CTG→CTC)	PP_5374 →	choline/carnitine/betaine transporter family protein
RA	6,125,923	A→C	7.0%	Q221P (CAG→CCG)	PP_5374 →	choline/carnitine/betaine transporter family protein
RA	6,129,216	A→C	8.0%	intergenic (+22/+45)	PP_5376 → / ← PP_5377	hypothetical protein/hypothetical protein
RA	6,129,226	C→T	8.2%	intergenic (+32/+35)	PP_5376 → / ← PP_5377	hypothetical protein/hypothetical protein
RA	6,129,229	A→T	8.8%	intergenic (+35/+32)	PP_5376 → / ← PP_5377	hypothetical protein/hypothetical protein
RA	6,129,232	A→G	8.9%	intergenic (+38/+29)	PP_5376 → / ← PP_5377	hypothetical protein/hypothetical protein
RA	6,129,242	G→T	6.4%	intergenic (+48/+19)	PP_5376 → / ← PP_5377	hypothetical protein/hypothetical protein
RA	6,132,191	C→G	5.2%	G573A (GGC→GCC)	copA‑II ←	copper resistance protein A
RA	6,169,837	T→A	6.2%	S172C (AGC→TGC)	PP_5408 ←	hypothetical protein
RA	6,169,846	T→A	6.1%	S169C (AGC→TGC)	PP_5408 ←	hypothetical protein
RA	6,174,764	G→T	7.4%	intergenic (‑70/+49)	glmU ← / ← atpC	bifunctional N‑acetyl glucosamine‑1‑phosphate uridyltransferase/glucosamine‑1‑phosphate acetyl transferase/ATP synthase subunit epsilon
RA	6,174,765	A→C	7.0%	intergenic (‑71/+48)	glmU ← / ← atpC	bifunctional N‑acetyl glucosamine‑1‑phosphate uridyltransferase/glucosamine‑1‑phosphate acetyl transferase/ATP synthase subunit epsilon
RA	6,180,715	A→T	10.1%	I263N (ATC→AAC)	atpB ←	ATP synthase subunit a

Unassigned new junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 31371	80 (0.900)	9 (0.110)	9/224	NT	10.3%	intergenic (+35/‑33)	PP_0026/PP_0027	cobalt/cadmium/zinc exporter/membrane protein
	?	NC_002947	= 31377	84 (1.040)					intergenic (+41/‑27)	PP_0026/PP_0027	cobalt/cadmium/zinc exporter/membrane protein
*	?	NC_002947	40697 =	88 (0.990)	5 (0.060)	5/232	NT	6.2%	coding (229/1290 nt)	oprP	porin P
	?	NC_002947	40753 =	68 (0.810)					coding (285/1290 nt)	oprP	porin P
*	?	NC_002947	= 66118	64 (0.720)	5 (0.060)	5/230	NT	7.0%	coding (1176/1653 nt)	betA‑I	choline dehydrogenase
	?	NC_002947	= 66126	74 (0.890)					coding (1184/1653 nt)	betA‑I	choline dehydrogenase
*	?	NC_002947	78259 =	96 (1.080)	6 (0.070)	5/230	NT	6.3%	coding (214/933 nt)	fmt	methionyl‑tRNA formyltransferase
	?	NC_002947	78282 =	90 (1.090)					coding (191/933 nt)	fmt	methionyl‑tRNA formyltransferase
*	?	NC_002947	86795 =	80 (0.900)	5 (0.060) +CTCCACCGCGT	5/224	NT	7.2%	intergenic (‑78/+67)	PP_0075/PP_0076	choline sulfate transporter/choline betaine‑binding protein
	?	NC_002947	3963073 =	62 (0.700)					intergenic (+75/+42)	PP_3492/PP_3493	acyl‑CoA dehydrogenase/LysR family transcriptional regulator
*	?	NC_002947	= 90374	124 (1.400)	9 (0.120)	7/214	NT	7.1%	intergenic (+49/+73)	PP_0079/PP_0080	transcriptional regulator/hypothetical protein
	?	NC_002947	= 90397	128 (1.660)					intergenic (+72/+50)	PP_0079/PP_0080	transcriptional regulator/hypothetical protein
*	?	NC_002947	100443 =	116 (1.310)	8 (0.100)	7/212	NT	7.2%	intergenic (‑35/+87)	PP_0094/PP_0095	5'‑nucleotidase/hypothetical protein
	?	NC_002947	100525 =	105 (1.380)					intergenic (‑117/+5)	PP_0094/PP_0095	5'‑nucleotidase/hypothetical protein
*	?	NC_002947	= 134680	56 (0.630)	6 (0.070)	5/234	NT	9.7%	coding (576/1938 nt)	PP_0129	GGDEF domain‑containing protein
	?	NC_002947	= 134694	58 (0.690)					coding (590/1938 nt)	PP_0129	GGDEF domain‑containing protein
*	?	NC_002947	156028 =	108 (1.220)	8 (0.090)	6/238	NT	7.5%	coding (348/798 nt)	ygdQ	transport protein
	?	NC_002947	156056 =	93 (1.090)					coding (320/798 nt)	ygdQ	transport protein
*	?	NC_002947	= 174474	NA (NA)	23 (0.280)	12/232	NT	NA	noncoding (1272/2902 nt)	PP_23SA	23S ribosomal RNA
	?	NC_002947	= 174479	NA (NA)					noncoding (1277/2902 nt)	PP_23SA	23S ribosomal RNA
*	?	NC_002947	= 176399	NA (NA)	66 (0.780) +CGAAA	22/236	NT	40.3%	intergenic (+43/‑420)	PP_5SA/PP_16SB	5S ribosomal RNA/16S ribosomal RNA
	?	NC_002947	= 182013	102 (1.150)					intergenic (+2/+63)	PP_5SB/PP_0160	5S ribosomal RNA/ferrioxamine receptor
*	?	NC_002947	= 201085	66 (0.750)	7 (0.080)	5/238	NT	9.0%	coding (6591/26049 nt)	PP_0168	putative surface adhesion protein
	?	NC_002947	= 201110	77 (0.900)					coding (6616/26049 nt)	PP_0168	putative surface adhesion protein
*	?	NC_002947	205046 =	NA (NA)	18 (0.210)	9/238	NT	16.7%	coding (10552/26049 nt)	PP_0168	putative surface adhesion protein
	?	NC_002947	213074 =	93 (1.050)					coding (18580/26049 nt)	PP_0168	putative surface adhesion protein
*	?	NC_002947	235320 =	100 (1.130)	17 (0.210)	11/226	NT	14.9%	intergenic (+17/+108)	PP_0183/argH	glutathione S‑transferase/argininosuccinate lyase
	?	NC_002947	235401 =	102 (1.250)					intergenic (+98/+27)	PP_0183/argH	glutathione S‑transferase/argininosuccinate lyase
*	?	NC_002947	255244 =	89 (1.010)	9 (0.110)	9/232	NT	9.5%	intergenic (‑128/+35)	PP_0203/PP_t74	dipeptidase/tRNA‑Arg
	?	NC_002947	255272 =	88 (1.050)					intergenic (‑156/+7)	PP_0203/PP_t74	dipeptidase/tRNA‑Arg
*	?	NC_002947	= 264723	79 (0.890)	11 (0.130)	10/232	NT	13.1%	intergenic (+31/‑47)	gabD‑I/PP_mr03	succinate‑semialdehyde dehydrogenase/gabT regulatory region
	?	NC_002947	= 264742	71 (0.850)					intergenic (+50/‑28)	gabD‑I/PP_mr03	succinate‑semialdehyde dehydrogenase/gabT regulatory region
*	?	NC_002947	277165 =	142 (1.600)	9 (0.120)	9/216	NT	7.6%	coding (3/1221 nt)	PP_0223	DszC family monooxygenase
	?	NC_002947	277234 =	94 (1.210)					intergenic (‑67/+30)	PP_0223/PP_0224	DszC family monooxygenase/DszC family monooxygenase
*	?	NC_002947	= 278757	85 (0.960)	6 (0.080)	6/198	NT	8.0%	intergenic (‑252/+63)	PP_0224/sctC	DszC family monooxygenase/sulfur compound ABC transporter ATP‑binding protein
	?	NC_002947	= 278780	70 (0.980)					intergenic (‑275/+40)	PP_0224/sctC	DszC family monooxygenase/sulfur compound ABC transporter ATP‑binding protein
*	?	NC_002947	= 282304	101 (1.140)	6 (0.070)	6/244	NT	5.2%	intergenic (+23/‑247)	PP_0228/betT‑II	serine acetyltransferase/choline/carnitine/betaine transporter
	?	NC_002947	= 282379	117 (1.330)					intergenic (+98/‑172)	PP_0228/betT‑II	serine acetyltransferase/choline/carnitine/betaine transporter
*	?	NC_002947	= 304450	75 (0.850)	5 (0.060)	5/236	NT	7.1%	coding (321/621 nt)	PP_0249	hypothetical protein
	?	NC_002947	= 304473	58 (0.680)					coding (298/621 nt)	PP_0249	hypothetical protein
*	?	NC_002947	= 310001	84 (0.950)	13 (0.160)	12/228	NT	13.1%	intergenic (‑166/+31)	PP_0255/PP_0256	hypothetical protein/putative oxidoreductase
	?	NC_002947	= 310014	95 (1.160)					intergenic (‑179/+18)	PP_0255/PP_0256	hypothetical protein/putative oxidoreductase
*	?	NC_002947	342930 =	97 (1.100)	7 (0.080)	7/230	NT	7.3%	intergenic (+58/+74)	gabP‑I/PP_5439	gamma‑aminobutyrate permease/hypothetical protein
	?	NC_002947	342979 =	88 (1.060)					intergenic (+107/+25)	gabP‑I/PP_5439	gamma‑aminobutyrate permease/hypothetical protein
*	?	NC_002947	353061 =	96 (1.080)	18 (0.270)	15/188	NT	21.5%	intergenic (+25/+93)	hisF/cbcV	imidazole glycerol phosphate synthase subunit HisF/choline/betaine/carnitine ABC transporter ATP binding protein
	?	NC_002947	353133 =	58 (0.860)					intergenic (+97/+21)	hisF/cbcV	imidazole glycerol phosphate synthase subunit HisF/choline/betaine/carnitine ABC transporter ATP binding protein
*	?	NC_002947	363530 =	71 (0.800)	6 (0.080)	5/212	NT	9.2%	intergenic (‑45/+122)	lcdH/PP_0303	L‑carnitine dehydrogenase/dehydrocarnitine cleavage enzyme
	?	NC_002947	363623 =	57 (0.750)					intergenic (‑138/+29)	lcdH/PP_0303	L‑carnitine dehydrogenase/dehydrocarnitine cleavage enzyme
*	?	NC_002947	376442 =	113 (1.280)	9 (0.110)	8/232	NT	7.8%	coding (486/771 nt)	PP_0313	electron transfer flavoprotein subunit beta
	?	NC_002947	376471 =	107 (1.280)					coding (515/771 nt)	PP_0313	electron transfer flavoprotein subunit beta
*	?	NC_002947	= 380858	81 (0.910)	9 (0.130)	7/200	NT	10.4%	intergenic (+45/+64)	gbcB/PP_0317	glycine‑betaine dioxygenase subunit/methyl‑accepting chemotaxis transducer
	?	NC_002947	= 380892	89 (1.240)					intergenic (+79/+30)	gbcB/PP_0317	glycine‑betaine dioxygenase subunit/methyl‑accepting chemotaxis transducer
*	?	NC_002947	386636 =	124 (1.400)	6 (0.070)	6/236	NT	5.6%	intergenic (‑98/‑228)	ltaE/glyA‑I	low specificity l‑threonine aldolase/serine hydroxymethyltransferase
	?	NC_002947	386719 =	84 (0.990)					intergenic (‑181/‑145)	ltaE/glyA‑I	low specificity l‑threonine aldolase/serine hydroxymethyltransferase
*	?	NC_002947	401317 =	48 (0.540)	12 (0.150)	7/220	NT	17.8%	coding (900/1059 nt)	PP_0334	transposase
	?	NC_002947	401373 =	68 (0.860)					coding (956/1059 nt)	PP_0334	transposase
*	?	NC_002947	= 414137	85 (0.960)	10 (0.120)	10/230	NT	10.8%	intergenic (+154/‑49)	glnE/waaF	glutamate‑ammonia‑ligase adenylyltransferase/ADP‑heptose:LPS heptosyltransferase II
	?	NC_002947	= 414158	86 (1.040)					intergenic (+175/‑28)	glnE/waaF	glutamate‑ammonia‑ligase adenylyltransferase/ADP‑heptose:LPS heptosyltransferase II
*	?	NC_002947	= 421630	66 (0.750)	4 (0.050)	4/228	NT	5.8%	coding (2321/2787 nt)	PP_0348	hypothetical protein
	?	NC_002947	= 421642	69 (0.840)					coding (2309/2787 nt)	PP_0348	hypothetical protein
*	?	NC_002947	436353 =	73 (0.820)	9 (0.110)	9/228	NT	13.4%	intergenic (+183/+50)	PP_0357/PP_0358	ACT domain‑containing protein/membrane protein
	?	NC_002947	436386 =	49 (0.600)					intergenic (+216/+17)	PP_0357/PP_0358	ACT domain‑containing protein/membrane protein
*	?	NC_002947	445062 =	80 (0.900)	16 (0.230)	11/192	NT	19.0%	intergenic (+32/‑256)	PP_0367/PP_0368	hypothetical protein/acyl‑CoA dehydrogenase
	?	NC_002947	445155 =	74 (1.070)					intergenic (+125/‑163)	PP_0367/PP_0368	hypothetical protein/acyl‑CoA dehydrogenase
*	?	NC_002947	= 445088	72 (0.810)	27 (0.390)	15/192	NT	29.3%	intergenic (+58/‑230)	PP_0367/PP_0368	hypothetical protein/acyl‑CoA dehydrogenase
	?	NC_002947	= 445127	74 (1.070)					intergenic (+97/‑191)	PP_0367/PP_0368	hypothetical protein/acyl‑CoA dehydrogenase
*	?	NC_002947	446027 =	98 (1.110)	6 (0.070)	6/242	NT	6.4%	coding (710/1806 nt)	PP_0368	acyl‑CoA dehydrogenase
	?	NC_002947	446049 =	80 (0.920)					coding (732/1806 nt)	PP_0368	acyl‑CoA dehydrogenase
*	?	NC_002947	478264 =	76 (0.860)	11 (0.160)	6/186	NT	17.6%	intergenic (+9/+101)	PP_0393/cca	2‑amino‑4‑hydroxy‑6‑ hydroxymethyldihydropteridine pyrophosphokinase/multifunctional tRNA nucleotidyltransferase/2',3'‑cyclic phosphodiesterase/2' nucleotidase/phosphatase
	?	NC_002947	478359 =	46 (0.690)					intergenic (+104/+6)	PP_0393/cca	2‑amino‑4‑hydroxy‑6‑ hydroxymethyldihydropteridine pyrophosphokinase/multifunctional tRNA nucleotidyltransferase/2',3'‑cyclic phosphodiesterase/2' nucleotidase/phosphatase
*	?	NC_002947	499197 =	85 (0.960)	10 (0.140)	8/198	NT	11.5%	intergenic (+38/‑258)	uhpA/PP_0411	two‑component system response regulator UhpA/polyamine ABC transporter ATP‑binding protein
	?	NC_002947	499284 =	86 (1.210)					intergenic (+125/‑171)	uhpA/PP_0411	two‑component system response regulator UhpA/polyamine ABC transporter ATP‑binding protein
*	?	NC_002947	= 499220	79 (0.890)	7 (0.100)	4/198	NT	8.6%	intergenic (+61/‑235)	uhpA/PP_0411	two‑component system response regulator UhpA/polyamine ABC transporter ATP‑binding protein
	?	NC_002947	= 499259	86 (1.210)					intergenic (+100/‑196)	uhpA/PP_0411	two‑component system response regulator UhpA/polyamine ABC transporter ATP‑binding protein
*	?	NC_002947	511907 =	139 (1.570)	15 (0.190)	13/216	NT	13.2%	intergenic (+44/‑104)	trpC/PP_0423	indole‑3‑glycerol phosphate synthase/hypothetical protein
	?	NC_002947	511985 =	76 (0.980)					intergenic (+122/‑26)	trpC/PP_0423	indole‑3‑glycerol phosphate synthase/hypothetical protein
*	?	NC_002947	524658 =	73 (0.820)	10 (0.110)	7/244	NT	12.1%	intergenic (+522/‑294)	tyrS/PP_16SC	tyrosine‑‑tRNA ligase/16S ribosomal RNA
	?	NC_002947	697511 =	NA (NA)					intergenic (+435/‑316)	mmsA‑I/PP_16SD	methylmalonate‑semialdehyde dehydrogenase/16S ribosomal RNA
*	?	NC_002947	575435 =	75 (0.850)	9 (0.110)	8/236	NT	11.3%	coding (469/3069 nt)	fdoG	formate dehydrogenase‑O major subunit
	?	NC_002947	575457 =	69 (0.810)					coding (491/3069 nt)	fdoG	formate dehydrogenase‑O major subunit
*	?	NC_002947	= 582186	107 (1.210)	6 (0.070)	5/240	NT	5.3%	coding (49/1923 nt)	selB	selenocysteyl‑tRNA‑specific translation elongation factor
	?	NC_002947	= 582220	108 (1.250)					coding (83/1923 nt)	selB	selenocysteyl‑tRNA‑specific translation elongation factor
*	?	NC_002947	594774 =	121 (1.370)	11 (0.140)	10/224	NT	8.7%	intergenic (‑10/+117)	PP_0505/PP_0506	hypothetical protein/ABC transporter permease
	?	NC_002947	594859 =	121 (1.500)					intergenic (‑95/+32)	PP_0505/PP_0506	hypothetical protein/ABC transporter permease
*	?	NC_002947	618970 =	100 (1.130)	6 (0.070)	6/234	NT	5.9%	coding (1031/1329 nt)	pfeS‑I	histidine kinase
	?	NC_002947	619007 =	98 (1.160)					coding (994/1329 nt)	pfeS‑I	histidine kinase
*	?	NC_002947	626429 =	76 (0.860)	5 (0.060)	5/236	NT	6.6%	coding (99/816 nt)	mtfA	glucose‑regulated peptidase
	?	NC_002947	626468 =	69 (0.810)					coding (60/816 nt)	mtfA	glucose‑regulated peptidase
*	?	NC_002947	= 652785	72 (0.810)	29 (0.390)	19/206	NT	48.7%	coding (1961/1962 nt)	ctpL	methyl‑accepting chemotaxis protein CtpL
	?	NC_002947	= 4808204	1 (0.010)					intergenic (‑268/‑287)	PP_4234/dsbD‑II	bifunctional aldehyde oxidase/xanthine dehydrogenase/thiol/disulfide interchange protein 2
*	?	NC_002947	668061 =	63 (0.710)	4 (0.060)	4/198	NT	7.4%	intergenic (+22/+130)	yfhM/PP_0571	lipoprotein/membrane protein
	?	NC_002947	668178 =	49 (0.690)					intergenic (+139/+13)	yfhM/PP_0571	lipoprotein/membrane protein
*	?	NC_002947	= 668084	61 (0.690)	5 (0.070)	5/198	NT	9.3%	intergenic (+45/+107)	yfhM/PP_0571	lipoprotein/membrane protein
	?	NC_002947	= 668153	49 (0.690)					intergenic (+114/+38)	yfhM/PP_0571	lipoprotein/membrane protein
*	?	NC_002947	= 671150	83 (0.940)	7 (0.080)	6/230	NT	7.7%	coding (202/1725 nt)	PP_0573	hypothetical protein
	?	NC_002947	= 671171	91 (1.100)					coding (223/1725 nt)	PP_0573	hypothetical protein
*	?	NC_002947	673987 =	83 (0.940)	6 (0.070)	6/232	NT	7.0%	coding (125/471 nt)	PP_0575	membrane protein
	?	NC_002947	674037 =	82 (0.980)					coding (75/471 nt)	PP_0575	membrane protein
*	?	NC_002947	= 703346	78 (0.880)	7 (0.080)	7/234	NT	8.9%	coding (82/660 nt)	PP_0598	paraquat‑inducible protein A
	?	NC_002947	= 703362	70 (0.830)					coding (98/660 nt)	PP_0598	paraquat‑inducible protein A
*	?	NC_002947	= 717400	76 (0.860)	8 (0.100)	7/232	NT	9.8%	coding (65/1098 nt)	thiO	FAD‑dependent glycine/D‑amino acid oxidase
	?	NC_002947	= 717411	75 (0.900)					coding (76/1098 nt)	thiO	FAD‑dependent glycine/D‑amino acid oxidase
*	?	NC_002947	= 718459	69 (0.780)	18 (0.240)	12/208	NT	22.2%	intergenic (+26/+51)	thiO/PP_0613	FAD‑dependent glycine/D‑amino acid oxidase/amidase family protein
	?	NC_002947	= 718465	68 (0.910)					intergenic (+32/+45)	thiO/PP_0613	FAD‑dependent glycine/D‑amino acid oxidase/amidase family protein
*	?	NC_002947	= 718460	71 (0.800)	12 (0.140)	11/242	NT	15.4%	intergenic (+27/+50)	thiO/PP_0613	FAD‑dependent glycine/D‑amino acid oxidase/amidase family protein
	?	NC_002947	4796659 =	62 (0.710)					intergenic (‑172/+46)	pvdH/PP_4224	diaminobutyrate‑2‑oxoglutarate transaminase/sensor histidine kinase
*	?	NC_002947	726899 =	92 (1.040)	8 (0.100)	7/218	NT	9.8%	intergenic (‑143/+124)	PP_0620/PP_0621	GntR family transcriptional regulator/hypothetical protein
	?	NC_002947	726986 =	66 (0.840)					intergenic (‑230/+37)	PP_0620/PP_0621	GntR family transcriptional regulator/hypothetical protein
*	?	NC_002947	729591 =	95 (1.070)	8 (0.100)	8/226	NT	8.5%	coding (118/741 nt)	yfiH	protein YfiH
	?	NC_002947	729633 =	86 (1.060)					coding (160/741 nt)	yfiH	protein YfiH
*	?	NC_002947	= 734332	81 (0.910)	5 (0.060)	5/224	NT	5.8%	coding (988/1296 nt)	ndh	NADH dehydrogenase
	?	NC_002947	= 734372	88 (1.090)					coding (948/1296 nt)	ndh	NADH dehydrogenase
*	?	NC_002947	= 741872	NA (NA)	4 (0.050)	4/234	NT	NA	intergenic (+469/‑31)	PP_t12/PP_0635	tRNA‑Thr/group II intron‑encoding maturase
	?	NC_002947	= 741905	NA (NA)					coding (3/1422 nt)	PP_0635	group II intron‑encoding maturase
*	?	NC_002947	= 742042	NA (NA)	10 (0.120)	9/238	NT	NA	coding (140/1422 nt)	PP_0635	group II intron‑encoding maturase
	?	NC_002947	= 742060	NA (NA)					coding (158/1422 nt)	PP_0635	group II intron‑encoding maturase
*	?	NC_002947	= 742614	NA (NA)	5 (0.060)	3/236	NT	NA	coding (712/1422 nt)	PP_0635	group II intron‑encoding maturase
	?	NC_002947	= 742645	NA (NA)					coding (743/1422 nt)	PP_0635	group II intron‑encoding maturase
*	?	NC_002947	742918 =	NA (NA)	12 (0.140)	8/234	NT	NA	coding (1016/1422 nt)	PP_0635	group II intron‑encoding maturase
	?	NC_002947	742948 =	NA (NA)					coding (1046/1422 nt)	PP_0635	group II intron‑encoding maturase
*	?	NC_002947	= 743469	118 (1.330)	15 (0.200) +AGGCAGGTCTGATTTCGC	11/210	NT	13.0%	intergenic (+145/+129)	PP_0635/PP_0636	group II intron‑encoding maturase/cold shock DNA‑binding domain‑containing protein
	?	NC_002947	= 1431465	NA (NA)					intergenic (+74/+78)	PP_1252/PP_1253	group II intron‑encoding maturase/ArsR family transcriptional regulator
*	?	NC_002947	= 777708	71 (0.800)	4 (0.050)	4/232	NT	5.6%	coding (755/2433 nt)	PP_0669	ferric siderophore receptor
	?	NC_002947	= 777730	68 (0.810)					coding (777/2433 nt)	PP_0669	ferric siderophore receptor
*	?	NC_002947	796828 =	118 (1.330)	6 (0.080)	6/214	NT	6.3%	intergenic (+27/‑163)	PP_0681/PP_0682	hypothetical protein/inner membrane protein
	?	NC_002947	796898 =	75 (0.970)					intergenic (+97/‑93)	PP_0681/PP_0682	hypothetical protein/inner membrane protein
*	?	NC_002947	800011 =	110 (1.240)	6 (0.070)	6/234	NT	5.5%	coding (465/969 nt)	ispB	octaprenyl diphosphate synthase
	?	NC_002947	800027 =	103 (1.220)					coding (449/969 nt)	ispB	octaprenyl diphosphate synthase
*	?	NC_002947	= 807806	68 (0.770)	5 (0.060)	5/240	NT	7.0%	coding (231/708 nt)	PP_0694	hypothetical protein
	?	NC_002947	= 807830	67 (0.780)					coding (207/708 nt)	PP_0694	hypothetical protein
*	?	NC_002947	862685 =	88 (0.990)	5 (0.060)	5/234	NT	5.9%	coding (735/906 nt)	yfcH	NAD(P)‑binding Rossmann‑fold domain‑containing protein
	?	NC_002947	862709 =	77 (0.910)					coding (759/906 nt)	yfcH	NAD(P)‑binding Rossmann‑fold domain‑containing protein
*	?	NC_002947	865531 =	72 (0.810)	4 (0.050)	4/230	NT	6.0%	coding (298/639 nt)	upp	uracil phosphoribosyltransferase
	?	NC_002947	865578 =	58 (0.700)					coding (251/639 nt)	upp	uracil phosphoribosyltransferase
*	?	NC_002947	867923 =	114 (1.290)	19 (0.240)	16/220	NT	14.7%	intergenic (+18/+159)	PP_0750/mqo‑I	hypothetical protein/malate:quinone oxidoreductase
	?	NC_002947	868013 =	118 (1.490)					intergenic (+108/+69)	PP_0750/mqo‑I	hypothetical protein/malate:quinone oxidoreductase
*	?	NC_002947	893476 =	101 (1.140)	8 (0.090)	5/236	NT	7.6%	coding (242/2088 nt)	pta	phosphate acetyltransferase
	?	NC_002947	893510 =	97 (1.140)					coding (208/2088 nt)	pta	phosphate acetyltransferase
*	?	NC_002947	= 910950	114 (1.290)	6 (0.070)	5/238	NT	5.1%	coding (1455/2853 nt)	fruB	PTS fructose transporter subunit EI/HPr/IIA
	?	NC_002947	= 910967	115 (1.340)					coding (1472/2853 nt)	fruB	PTS fructose transporter subunit EI/HPr/IIA
*	?	NC_002947	= 913070	85 (0.960)	7 (0.080)	6/232	NT	8.1%	coding (722/948 nt)	fruK	1‑phosphofructokinase monomer
	?	NC_002947	= 913099	78 (0.930)					coding (751/948 nt)	fruK	1‑phosphofructokinase monomer
*	?	NC_002947	914210 =	99 (1.120)	6 (0.070)	6/234	NT	6.1%	coding (918/1743 nt)	fruA	PTS fructose transporter subunit IIBC
	?	NC_002947	914248 =	90 (1.070)					coding (956/1743 nt)	fruA	PTS fructose transporter subunit IIBC
*	?	NC_002947	917692 =	101 (1.140)	10 (0.120)	6/224	NT	9.8%	intergenic (‑123/+76)	PP_0798/opdC	GGDEF domain‑containing protein/histidine‑specific outer membrane porin D
	?	NC_002947	917754 =	93 (1.150)					intergenic (‑185/+14)	PP_0798/opdC	GGDEF domain‑containing protein/histidine‑specific outer membrane porin D
*	?	NC_002947	930204 =	79 (0.890)	10 (0.120)	8/236	NT	11.9%	coding (15421/18933 nt)	PP_0806	surface adhesion protein
	?	NC_002947	930227 =	72 (0.850)					coding (15398/18933 nt)	PP_0806	surface adhesion protein
*	?	NC_002947	= 941707	73 (0.820)	4 (0.050)	4/232	NT	5.2%	coding (3918/18933 nt)	PP_0806	surface adhesion protein
	?	NC_002947	= 941729	77 (0.920)					coding (3896/18933 nt)	PP_0806	surface adhesion protein
*	?	NC_002947	= 993697	71 (0.800)	7 (0.080)	6/236	NT	9.1%	coding (701/1149 nt)	PP_0858	methionine/glutamine aminotransferase
	?	NC_002947	= 993717	72 (0.850)					coding (721/1149 nt)	PP_0858	methionine/glutamine aminotransferase
*	?	NC_002947	1005112 =	124 (1.400)	12 (0.140)	10/242	NT	9.4%	coding (39/2430 nt)	PP_0867	FecA‑like outer membrane receptor
	?	NC_002947	1005137 =	109 (1.250)					coding (64/2430 nt)	PP_0867	FecA‑like outer membrane receptor
*	?	NC_002947	1013232 =	75 (0.850)	24 (0.280)	26/236	NT	28.2%	intergenic (+57/+74)	prfC/potF‑I	peptide chain release factor 3/putrescine‑binding protein
	?	NC_002947	1013258 =	50 (0.590)					intergenic (+83/+48)	prfC/potF‑I	peptide chain release factor 3/putrescine‑binding protein
*	?	NC_002947	= 1036467	73 (0.820)	5 (0.060)	5/240	NT	6.4%	coding (169/591 nt)	PP_0895	hypothetical protein
	?	NC_002947	= 1036482	76 (0.880)					coding (184/591 nt)	PP_0895	hypothetical protein
*	?	NC_002947	1037774 =	90 (1.020)	16 (0.220)	10/200	NT	19.6%	intergenic (+16/+100)	PP_0896/PP_0897	carbon‑nitrogen hydrolase family protein/class 1 fumarate hydratase
	?	NC_002947	1037852 =	58 (0.810)					intergenic (+94/+22)	PP_0896/PP_0897	carbon‑nitrogen hydrolase family protein/class 1 fumarate hydratase
*	?	NC_002947	1050145 =	106 (1.200)	6 (0.070)	5/232	NT	5.8%	coding (711/1098 nt)	PP_0908	hypothetical protein
	?	NC_002947	1050184 =	94 (1.130)					coding (672/1098 nt)	PP_0908	hypothetical protein
*	?	NC_002947	1086483 =	74 (0.840)	4 (0.050)	4/240	NT	5.1%	intergenic (+9/+49)	tldD/PP_0941	microcin B17 maturation protease/ribosome associated protein
	?	NC_002947	1086526 =	76 (0.880)					intergenic (+52/+6)	tldD/PP_0941	microcin B17 maturation protease/ribosome associated protein
*	?	NC_002947	= 1102896	81 (0.910)	11 (0.130)	7/244	NT	12.1%	intergenic (+30/‑88)	ttg2E/ttg2F	toluene‑tolerance protein/BolA family protein
	?	NC_002947	= 1102921	80 (0.910)					intergenic (+55/‑63)	ttg2E/ttg2F	toluene‑tolerance protein/BolA family protein
*	?	NC_002947	= 1114899	82 (0.930)	20 (0.280)	16/196	NT	21.1%	intergenic (‑88/+91)	rlmF/valS	ribosomal RNA large subunit methyltransferase F/valine‑‑tRNA ligase
	?	NC_002947	= 1114925	84 (1.190)					intergenic (‑114/+65)	rlmF/valS	ribosomal RNA large subunit methyltransferase F/valine‑‑tRNA ligase
*	?	NC_002947	1126598 =	67 (0.760)	11 (0.150)	7/204	NT	16.7%	intergenic (‑47/+103)	tdcG‑II/gcvP‑I	L‑serine dehydratase/glycine dehydrogenase
	?	NC_002947	1126656 =	54 (0.740)					intergenic (‑105/+45)	tdcG‑II/gcvP‑I	L‑serine dehydratase/glycine dehydrogenase
*	?	NC_002947	= 1126618	65 (0.730)	18 (0.250)	12/204	NT	25.0%	intergenic (‑67/+83)	tdcG‑II/gcvP‑I	L‑serine dehydratase/glycine dehydrogenase
	?	NC_002947	= 1126634	54 (0.740)					intergenic (‑83/+67)	tdcG‑II/gcvP‑I	L‑serine dehydratase/glycine dehydrogenase
*	?	NC_002947	= 1126676	67 (0.760)	4 (0.050)	4/228	NT	5.8%	intergenic (‑125/+25)	tdcG‑II/gcvP‑I	L‑serine dehydratase/glycine dehydrogenase
	?	NC_002947	= 1126683	67 (0.820)					intergenic (‑132/+18)	tdcG‑II/gcvP‑I	L‑serine dehydratase/glycine dehydrogenase
*	?	NC_002947	= 1129385	72 (0.810)	4 (0.050)	4/242	NT	5.0%	coding (172/2856 nt)	gcvP‑I	glycine dehydrogenase
	?	NC_002947	= 1129406	81 (0.930)					coding (151/2856 nt)	gcvP‑I	glycine dehydrogenase
*	?	NC_002947	1149908 =	74 (0.840)	11 (0.130)	7/238	NT	13.5%	intergenic (‑149/+108)	PP_1008/gapA	RNA polymerase subunit sigma‑24/glyceraldehyde‑3‑phosphate dehydrogenase
	?	NC_002947	1150021 =	69 (0.810)					coding (997/1002 nt)	gapA	glyceraldehyde‑3‑phosphate dehydrogenase
*	?	NC_002947	= 1149932	67 (0.760)	8 (0.100)	6/230	NT	10.6%	intergenic (‑173/+84)	PP_1008/gapA	RNA polymerase subunit sigma‑24/glyceraldehyde‑3‑phosphate dehydrogenase
	?	NC_002947	= 1149995	72 (0.870)					intergenic (‑236/+21)	PP_1008/gapA	RNA polymerase subunit sigma‑24/glyceraldehyde‑3‑phosphate dehydrogenase
*	?	NC_002947	1156328 =	50 (0.560)	18 (0.260)	13/196	NT	33.1%	intergenic (+25/‑191)	PP_1013/yihS	sensor histidine kinase/aldose‑ketose isomerase
	?	NC_002947	1156401 =	33 (0.470)					intergenic (+98/‑118)	PP_1013/yihS	sensor histidine kinase/aldose‑ketose isomerase
*	?	NC_002947	1184226 =	86 (0.970)	6 (0.070)	5/238	NT	6.2%	coding (165/1458 nt)	mltF	membrane‑bound lytic murein transglycosylase F
	?	NC_002947	1184281 =	97 (1.130)					coding (110/1458 nt)	mltF	membrane‑bound lytic murein transglycosylase F
*	?	NC_002947	= 1187301	93 (1.050)	6 (0.070)	5/224	NT	6.3%	coding (2500/3900 nt)	purL	phosphoribosylformylglycinamidine synthase
	?	NC_002947	= 1187350	93 (1.150)					coding (2549/3900 nt)	purL	phosphoribosylformylglycinamidine synthase
*	?	NC_002947	= 1195794	98 (1.110)	6 (0.070)	6/242	NT	5.6%	coding (278/426 nt)	xcpP	type II secretion pathway protein XcpP
	?	NC_002947	= 1195830	105 (1.210)					coding (314/426 nt)	xcpP	type II secretion pathway protein XcpP
*	?	NC_002947	= 1195878	129 (1.460)	7 (0.080)	6/234	NT	5.3%	coding (362/426 nt)	xcpP	type II secretion pathway protein XcpP
	?	NC_002947	= 1195894	128 (1.520)					coding (378/426 nt)	xcpP	type II secretion pathway protein XcpP
*	?	NC_002947	1219798 =	92 (1.040)	5 (0.060)	5/230	NT	5.7%	coding (162/336 nt)	glmP	alginate biosynthesis membrane protein
	?	NC_002947	1219825 =	79 (0.950)					coding (135/336 nt)	glmP	alginate biosynthesis membrane protein
*	?	NC_002947	= 1225143	74 (0.840)	4 (0.050)	4/236	NT	5.4%	coding (288/747 nt)	gltJ	glutamate/aspartate ABC transporter permease
	?	NC_002947	= 1225156	69 (0.810)					coding (275/747 nt)	gltJ	glutamate/aspartate ABC transporter permease
*	?	NC_002947	1237638 =	77 (0.870)	4 (0.050)	4/230	NT	5.8%	coding (477/1110 nt)	PP_1078	ABC transporter ATP‑binding protein
	?	NC_002947	1237695 =	57 (0.690)					coding (420/1110 nt)	PP_1078	ABC transporter ATP‑binding protein
*	?	NC_002947	= 1258228	90 (1.020)	9 (0.110)	7/236	NT	9.3%	coding (137/261 nt)	PP_1101	hypothetical protein
	?	NC_002947	= 1258246	89 (1.050)					coding (155/261 nt)	PP_1101	hypothetical protein
*	?	NC_002947	1266235 =	105 (1.190)	5 (0.060)	5/232	NT	5.0%	coding (1759/2442 nt)	quiP	acyl‑homoserine lactone acylase QuiP
	?	NC_002947	1266275 =	91 (1.090)					coding (1719/2442 nt)	quiP	acyl‑homoserine lactone acylase QuiP
*	?	NC_002947	= 1273270	101 (1.140)	9 (0.120)	7/216	NT	9.3%	intergenic (+55/+113)	PP_1113/PP_1114	pyridoxal‑phosphate dependent enzyme family protein/SEC‑C domain‑containing protein
	?	NC_002947	= 1273329	86 (1.110)					intergenic (+114/+54)	PP_1113/PP_1114	pyridoxal‑phosphate dependent enzyme family protein/SEC‑C domain‑containing protein
*	?	NC_002947	= 1283232	70 (0.790)	7 (0.080)	8/238	NT	8.6%	coding (184/483 nt)	PP_1119	hypothetical protein
	?	NC_002947	= 1283246	81 (0.950)					coding (170/483 nt)	PP_1119	hypothetical protein
*	?	NC_002947	1296495 =	NA (NA)	10 (0.110)	8/244	NT	NA	intergenic (‑242/‑324)	nhaA‑I/PP_1133	Na(+)/H(+) antiporter NhaA/transposase
	?	NC_002947	1296515 =	NA (NA)					intergenic (‑262/‑304)	nhaA‑I/PP_1133	Na(+)/H(+) antiporter NhaA/transposase
*	?	NC_002947	1296509 =	NA (NA)	15 (0.180)	12/232	NT	NA	intergenic (‑256/‑310)	nhaA‑I/PP_1133	Na(+)/H(+) antiporter NhaA/transposase
	?	NC_002947	1296527 =	NA (NA)					intergenic (‑274/‑292)	nhaA‑I/PP_1133	Na(+)/H(+) antiporter NhaA/transposase
*	?	NC_002947	= 1296796	NA (NA)	5 (0.060)	5/232	NT	NA	intergenic (‑543/‑23)	nhaA‑I/PP_1133	Na(+)/H(+) antiporter NhaA/transposase
	?	NC_002947	= 1296820	NA (NA)					coding (2/1329 nt)	PP_1133	transposase
*	?	NC_002947	= 1296905	NA (NA)	16 (0.190)	13/232	NT	NA	coding (87/1329 nt)	PP_1133	transposase
	?	NC_002947	= 1296920	NA (NA)					coding (102/1329 nt)	PP_1133	transposase
*	?	NC_002947	1351554 =	81 (0.910)	8 (0.100)	6/232	NT	9.8%	coding (237/1251 nt)	nrdB	ribonucleoside‑diphosphate reductase subunit beta
	?	NC_002947	1351579 =	71 (0.850)					coding (212/1251 nt)	nrdB	ribonucleoside‑diphosphate reductase subunit beta
*	?	NC_002947	1371738 =	84 (0.950)	4 (0.050)	4/224	NT	5.2%	intergenic (+5/+67)	PP_1196/rimO	hypothetical protein/ribosomal protein S12 methylthiotransferase
	?	NC_002947	1371789 =	68 (0.840)					intergenic (+56/+16)	PP_1196/rimO	hypothetical protein/ribosomal protein S12 methylthiotransferase
*	?	NC_002947	= 1375316	81 (0.910)	7 (0.080)	4/238	NT	7.7%	coding (930/1911 nt)	kup	potassium transport system protein Kup
	?	NC_002947	= 1375348	89 (1.040)					coding (962/1911 nt)	kup	potassium transport system protein Kup
*	?	NC_002947	1392884 =	74 (0.840)	10 (0.160)	9/172	NT	19.1%	intergenic (+48/‑138)	PP_1214/ruvC	transcriptional regulator/crossover junction endodeoxyribonuclease RuvC
	?	NC_002947	1392984 =	33 (0.530)					intergenic (+148/‑38)	PP_1214/ruvC	transcriptional regulator/crossover junction endodeoxyribonuclease RuvC
*	?	NC_002947	= 1400079	99 (1.120)	7 (0.080)	6/232	NT	6.7%	coding (43/807 nt)	ybgF	TolQRA transport system periplasmic protein
	?	NC_002947	= 1400095	102 (1.220)					coding (59/807 nt)	ybgF	TolQRA transport system periplasmic protein
*	?	NC_002947	= 1418455	64 (0.720)	8 (0.100)	8/232	NT	10.8%	intergenic (+16/+83)	PP_t14/PP_1241	tRNA‑Ser/hypothetical protein
	?	NC_002947	= 1418473	72 (0.860)					intergenic (+34/+65)	PP_t14/PP_1241	tRNA‑Ser/hypothetical protein
*	?	NC_002947	1419553 =	21 (0.240)	9 (0.140)	9/182	NT	32.4%	intergenic (‑36/+101)	PP_1242/PP_1244	hypothetical protein/hypothetical protein
	?	NC_002947	1419647 =	22 (0.340)					intergenic (‑130/+7)	PP_1242/PP_1244	hypothetical protein/hypothetical protein
*	?	NC_002947	= 1419584	20 (0.230)	20 (0.310)	17/182	NT	52.1%	intergenic (‑67/+70)	PP_1242/PP_1244	hypothetical protein/hypothetical protein
	?	NC_002947	= 1419614	22 (0.340)					intergenic (‑97/+40)	PP_1242/PP_1244	hypothetical protein/hypothetical protein
*	?	NC_002947	= 1426482	NA (NA)	7 (0.080)	3/238	NT	NA	coding (373/1422 nt)	PP_1250	group II intron‑encoding maturase
	?	NC_002947	= 1426517	NA (NA)					coding (408/1422 nt)	PP_1250	group II intron‑encoding maturase
*	?	NC_002947	= 1426821	NA (NA)	18 (0.210)	11/236	NT	NA	coding (712/1422 nt)	PP_1250	group II intron‑encoding maturase
	?	NC_002947	= 1426852	NA (NA)					coding (743/1422 nt)	PP_1250	group II intron‑encoding maturase
*	?	NC_002947	= 1436044	109 (1.230)	9 (0.110)	7/230	NT	9.4%	intergenic (‑74/+79)	PP_1256/PP_1257	alpha‑ketoglutarate semialdehyde dehydrogenase/1‑pyrroline‑4‑hydroxy‑2‑carboxylate deaminase
	?	NC_002947	= 2957176	71 (0.860)					intergenic (+88/‑108)	PP_2588/PP_2589	class III aminotransferase/aldehyde dehydrogenase family protein
*	?	NC_002947	1443111 =	38 (0.430)	10 (0.140)	7/196	NT	22.2%	intergenic (‑42/+134)	ghrB/PP_1262	2‑ketoaldonate reductase/hydroxypyruvate/glyoxylate reductase/LysR family transcriptional regulator
	?	NC_002947	1443179 =	40 (0.570)					intergenic (‑110/+66)	ghrB/PP_1262	2‑ketoaldonate reductase/hydroxypyruvate/glyoxylate reductase/LysR family transcriptional regulator
*	?	NC_002947	= 1443135	37 (0.420)	10 (0.140)	9/196	NT	22.4%	intergenic (‑66/+110)	ghrB/PP_1262	2‑ketoaldonate reductase/hydroxypyruvate/glyoxylate reductase/LysR family transcriptional regulator
	?	NC_002947	= 1443153	40 (0.570)					intergenic (‑84/+92)	ghrB/PP_1262	2‑ketoaldonate reductase/hydroxypyruvate/glyoxylate reductase/LysR family transcriptional regulator
*	?	NC_002947	1448707 =	97 (1.100)	6 (0.070)	4/236	NT	6.2%	coding (420/861 nt)	PP_1266	fusaric acid resistance protein
	?	NC_002947	1448777 =	88 (1.040)					coding (490/861 nt)	PP_1266	fusaric acid resistance protein
*	?	NC_002947	= 1452353	108 (1.220)	8 (0.090)	7/236	NT	7.5%	coding (508/1542 nt)	PP_1271	putative Multidrug efflux MFS transporter
	?	NC_002947	= 1452371	95 (1.120)					coding (526/1542 nt)	PP_1271	putative Multidrug efflux MFS transporter
*	?	NC_002947	1469388 =	84 (0.950)	9 (0.110)	8/230	NT	9.8%	coding (762/1455 nt)	algK	alginate biosynthesis protein AlgK
	?	NC_002947	1469416 =	88 (1.060)					coding (734/1455 nt)	algK	alginate biosynthesis protein AlgK
*	?	NC_002947	1487013 =	42 (0.470)	14 (0.210)	13/186	NT	28.1%	intergenic (+22/+108)	yhdZ/degS	amino acid ABC transporter ATP‑binding protein/serine endoprotease DegS
	?	NC_002947	1487103 =	40 (0.600)					intergenic (+112/+18)	yhdZ/degS	amino acid ABC transporter ATP‑binding protein/serine endoprotease DegS
*	?	NC_002947	= 1487042	39 (0.440)	12 (0.180)	9/186	NT	25.7%	intergenic (+51/+79)	yhdZ/degS	amino acid ABC transporter ATP‑binding protein/serine endoprotease DegS
	?	NC_002947	= 1487072	40 (0.600)					intergenic (+81/+49)	yhdZ/degS	amino acid ABC transporter ATP‑binding protein/serine endoprotease DegS
*	?	NC_002947	= 1499465	48 (0.540)	11 (0.150)	9/200	NT	19.5%	intergenic (+35/‑131)	trpS/zapE	tryptophan‑‑tRNA ligase/nucleoside triphosphate hydrolase domain‑containing protein
	?	NC_002947	= 1499502	52 (0.720)					intergenic (+72/‑94)	trpS/zapE	tryptophan‑‑tRNA ligase/nucleoside triphosphate hydrolase domain‑containing protein
*	?	NC_002947	= 1510380	85 (0.960)	7 (0.080)	7/230	NT	7.8%	pseudogene (1229/1851 nt)	PP_1325	putative lipoprotein
	?	NC_002947	= 1510388	87 (1.050)					pseudogene (1221/1851 nt)	PP_1325	putative lipoprotein
*	?	NC_002947	= 1515744	73 (0.820)	7 (0.090)	6/226	NT	8.9%	coding (637/1749 nt)	ftsI	peptidoglycan DD transpeptidase
	?	NC_002947	= 1515753	76 (0.940)					coding (646/1749 nt)	ftsI	peptidoglycan DD transpeptidase
*	?	NC_002947	1531788 =	47 (0.530)	8 (0.110)	7/198	NT	19.6%	coding (130/630 nt)	PP_1344	hypothetical protein
	?	NC_002947	1531884 =	28 (0.390)					coding (34/630 nt)	PP_1344	hypothetical protein
*	?	NC_002947	= 1531811	41 (0.460)	16 (0.220)	12/198	NT	34.4%	coding (107/630 nt)	PP_1344	hypothetical protein
	?	NC_002947	= 1531859	28 (0.390)					coding (59/630 nt)	PP_1344	hypothetical protein
*	?	NC_002947	1541617 =	110 (1.240)	7 (0.090)	7/228	NT	6.7%	intergenic (‑51/‑50)	panE/PP_1352	2‑dehydropantoate 2‑reductase/hypothetical protein
	?	NC_002947	1541647 =	93 (1.130)					intergenic (‑81/‑20)	panE/PP_1352	2‑dehydropantoate 2‑reductase/hypothetical protein
*	?	NC_002947	1544501 =	79 (0.890)	15 (0.220)	19/186	NT	26.9%	intergenic (+18/+96)	mdfA/ampG	multidrug MFS transporter/muropeptide permease AmpG
	?	NC_002947	1544577 =	22 (0.330)					intergenic (+94/+20)	mdfA/ampG	multidrug MFS transporter/muropeptide permease AmpG
*	?	NC_002947	1562365 =	93 (1.050)	8 (0.100)	7/234	NT	9.6%	coding (65/1476 nt)	PP_1372	hypothetical protein
	?	NC_002947	1562403 =	63 (0.750)					coding (103/1476 nt)	PP_1372	hypothetical protein
*	?	NC_002947	1570443 =	74 (0.840)	12 (0.170)	9/194	NT	18.6%	intergenic (+9/‑179)	pcaF‑I/pcaT	beta‑ketoadipyl‑CoA thiolase/alpha‑ketoglutarate permease
	?	NC_002947	1570521 =	47 (0.670)					intergenic (+87/‑101)	pcaF‑I/pcaT	beta‑ketoadipyl‑CoA thiolase/alpha‑ketoglutarate permease
*	?	NC_002947	= 1581070	119 (1.340)	10 (0.120)	8/234	NT	7.9%	coding (369/3153 nt)	ttgB	efflux pump membrane protein TtgB
	?	NC_002947	= 1581083	121 (1.440)					coding (356/3153 nt)	ttgB	efflux pump membrane protein TtgB
*	?	NC_002947	= 1583554	93 (1.050)	6 (0.070)	6/234	NT	6.1%	intergenic (+68/+50)	ttgR/PP_1388	HTH‑type transcriptional regulator TtgR/EmrB/QacA family drug resistance transporter
	?	NC_002947	= 1583575	95 (1.130)					intergenic (+89/+29)	ttgR/PP_1388	HTH‑type transcriptional regulator TtgR/EmrB/QacA family drug resistance transporter
*	?	NC_002947	1590210 =	97 (1.100)	6 (0.070)	6/238	NT	6.3%	coding (957/1638 nt)	PP_1394	acetolactate synthase large subunit
	?	NC_002947	1590235 =	85 (0.990)					coding (982/1638 nt)	PP_1394	acetolactate synthase large subunit
*	?	NC_002947	= 1595834	88 (0.990)	8 (0.090)	8/244	NT	8.0%	coding (1219/1335 nt)	dctD‑III	C4‑dicarboxylate transport transcriptional regulator
	?	NC_002947	= 1595861	96 (1.090)					coding (1192/1335 nt)	dctD‑III	C4‑dicarboxylate transport transcriptional regulator
*	?	NC_002947	= 1598430	88 (0.990)	5 (0.060)	4/236	NT	5.5%	coding (374/1758 nt)	dctB	C4‑dicarboxylate transport sensor protein
	?	NC_002947	= 1598457	88 (1.040)					coding (347/1758 nt)	dctB	C4‑dicarboxylate transport sensor protein
*	?	NC_002947	1612894 =	104 (1.170)	6 (0.070)	4/226	NT	6.3%	coding (649/693 nt)	ung	uracil‑DNA glycosylase
	?	NC_002947	1612936 =	83 (1.020)					coding (691/693 nt)	ung	uracil‑DNA glycosylase
*	?	NC_002947	= 1636922	98 (1.110)	9 (0.110)	8/232	NT	8.6%	coding (330/741 nt)	pdxJ	pyridoxine 5'‑phosphate synthase
	?	NC_002947	= 1636929	99 (1.190)					coding (337/741 nt)	pdxJ	pyridoxine 5'‑phosphate synthase
*	?	NC_002947	1647282 =	73 (0.820)	4 (0.050)	4/238	NT	5.2%	coding (117/2412 nt)	gcd	quinoprotein glucose dehydrogenase
	?	NC_002947	1647321 =	75 (0.880)					coding (78/2412 nt)	gcd	quinoprotein glucose dehydrogenase
*	?	NC_002947	1651584 =	106 (1.200)	7 (0.080)	7/232	NT	6.9%	coding (97/636 nt)	PP_1448	membrane protein
	?	NC_002947	1651608 =	88 (1.050)					coding (121/636 nt)	PP_1448	membrane protein
*	?	NC_002947	1666814 =	98 (1.110)	7 (0.080)	7/238	NT	7.7%	intergenic (‑44/‑227)	PP_1460/ffh	membrane protein/signal recognition particle GTPase subunit
	?	NC_002947	1666895 =	74 (0.860)					intergenic (‑125/‑146)	PP_1460/ffh	membrane protein/signal recognition particle GTPase subunit
*	?	NC_002947	= 1666822	92 (1.040)	9 (0.110)	7/238	NT	9.8%	intergenic (‑52/‑219)	PP_1460/ffh	membrane protein/signal recognition particle GTPase subunit
	?	NC_002947	= 1666885	76 (0.890)					intergenic (‑115/‑156)	PP_1460/ffh	membrane protein/signal recognition particle GTPase subunit
*	?	NC_002947	1678654 =	70 (0.790)	6 (0.070)	5/228	NT	8.8%	intergenic (+94/+93)	PP_1473/PP_1474	hypothetical protein/hypothetical protein
	?	NC_002947	1678682 =	60 (0.730)					intergenic (+122/+65)	PP_1473/PP_1474	hypothetical protein/hypothetical protein
*	?	NC_002947	= 1695039	96 (1.080)	6 (0.070)	6/236	NT	5.8%	coding (963/1275 nt)	wspC	biofilm formation methyltransferase WspC
	?	NC_002947	= 1695092	103 (1.210)					coding (1016/1275 nt)	wspC	biofilm formation methyltransferase WspC
*	?	NC_002947	= 1700671	73 (0.820)	5 (0.060)	5/232	NT	6.6%	coding (97/1023 nt)	prfB	peptide chain release factor 2
	?	NC_002947	= 1700687	72 (0.860)					coding (113/1023 nt)	prfB	peptide chain release factor 2
*	?	NC_002947	= 1703289	101 (1.140)	15 (0.170)	9/246	NT	13.0%	intergenic (+96/‑71)	lysS/PP_1497	lysine‑‑tRNA ligase/TetR family transcriptional regulator
	?	NC_002947	2101556 =	100 (1.130)					intergenic (+49/+27)	msrC/PP_1878	free methionine‑(R)‑sulfoxide reductase/hypothetical protein
*	?	NC_002947	1731205 =	54 (0.610)	13 (0.190)	9/190	NT	25.6%	intergenic (‑76/+115)	dapE/PP_1526	succinyl‑diaminopimelate desuccinylase/beta‑(1‑3)‑glucosyl transferase
	?	NC_002947	1731297 =	34 (0.500)					intergenic (‑168/+23)	dapE/PP_1526	succinyl‑diaminopimelate desuccinylase/beta‑(1‑3)‑glucosyl transferase
*	?	NC_002947	1732887 =	97 (1.100)	5 (0.060)	5/236	NT	5.3%	coding (1025/2592 nt)	PP_1526	beta‑(1‑3)‑glucosyl transferase
	?	NC_002947	1732909 =	87 (1.020)					coding (1003/2592 nt)	PP_1526	beta‑(1‑3)‑glucosyl transferase
*	?	NC_002947	1739822 =	98 (1.110)	11 (0.130)	11/242	NT	11.1%	intergenic (‑14/+43)	PP_1534/PP_1535	hypothetical protein/putative Methyltransferase
	?	NC_002947	1739848 =	80 (0.920)					intergenic (‑40/+17)	PP_1534/PP_1535	hypothetical protein/putative Methyltransferase
*	?	NC_002947	= 1750641	94 (1.060)	7 (0.080)	7/236	NT	7.3%	intergenic (+99/‑43)	PP_1550/PP_1551	Cro/CI family transcriptional regulator/replication protein O
	?	NC_002947	= 1750647	87 (1.020)					intergenic (+105/‑37)	PP_1550/PP_1551	Cro/CI family transcriptional regulator/replication protein O
*	?	NC_002947	= 1771941	99 (1.120)	8 (0.090)	8/238	NT	7.6%	coding (2647/3000 nt)	PP_1579	hypothetical protein
	?	NC_002947	= 1771957	98 (1.140)					coding (2663/3000 nt)	PP_1579	hypothetical protein
*	?	NC_002947	1777114 =	101 (1.140)	5 (0.060)	5/230	NT	5.5%	coding (109/303 nt)	PP_5476	hypothetical protein
	?	NC_002947	1777148 =	77 (0.930)					coding (143/303 nt)	PP_5476	hypothetical protein
*	?	NC_002947	1780109 =	73 (0.820)	15 (0.200)	13/208	NT	21.5%	intergenic (+26/+80)	PP_1587/dapC	NhaP‑type Na+(K+)/H+ antiporter/N‑succinyl‑L,L‑diaminopimelate aminotransferase
	?	NC_002947	1780171 =	48 (0.640)					intergenic (+88/+18)	PP_1587/dapC	NhaP‑type Na+(K+)/H+ antiporter/N‑succinyl‑L,L‑diaminopimelate aminotransferase
*	?	NC_002947	1780597 =	65 (0.730)	9 (0.110)	6/234	NT	13.0%	coding (789/1197 nt)	dapC	N‑succinyl‑L,L‑diaminopimelate aminotransferase
	?	NC_002947	1780635 =	59 (0.700)					coding (751/1197 nt)	dapC	N‑succinyl‑L,L‑diaminopimelate aminotransferase
*	?	NC_002947	1797361 =	86 (0.970)	5 (0.060)	5/236	NT	5.7%	coding (20/777 nt)	lpxA	acyl‑[acyl‑carrier‑protein]‑‑UDP‑N‑ acetylglucosamine O‑acyltransferase
	?	NC_002947	1797413 =	82 (0.970)					coding (72/777 nt)	lpxA	acyl‑[acyl‑carrier‑protein]‑‑UDP‑N‑ acetylglucosamine O‑acyltransferase
*	?	NC_002947	1798642 =	106 (1.200)	10 (0.120)	8/236	NT	9.7%	coding (523/1128 nt)	lpxB	lipid‑A‑disaccharide synthase
	?	NC_002947	1798676 =	85 (1.000)					coding (557/1128 nt)	lpxB	lipid‑A‑disaccharide synthase
*	?	NC_002947	1799893 =	106 (1.200)	8 (0.110)	8/200	NT	8.7%	intergenic (+21/‑166)	rnhB/dnaEA	ribonuclease HII/DNA polymerase III subunit alpha
	?	NC_002947	1799981 =	81 (1.130)					intergenic (+109/‑78)	rnhB/dnaEA	ribonuclease HII/DNA polymerase III subunit alpha
*	?	NC_002947	= 1799915	105 (1.190)	19 (0.260)	13/200	NT	18.6%	intergenic (+43/‑144)	rnhB/dnaEA	ribonuclease HII/DNA polymerase III subunit alpha
	?	NC_002947	= 1799957	81 (1.130)					intergenic (+85/‑102)	rnhB/dnaEA	ribonuclease HII/DNA polymerase III subunit alpha
*	?	NC_002947	= 1804733	115 (1.300)	7 (0.080)	7/238	NT	5.8%	intergenic (+96/‑76)	accA/tilS	acetyl‑CoA carboxylase carboxyltransferase subunit alpha/tRNA lysidine(34) synthetase TilS
	?	NC_002947	= 1804747	115 (1.340)					intergenic (+110/‑62)	accA/tilS	acetyl‑CoA carboxylase carboxyltransferase subunit alpha/tRNA lysidine(34) synthetase TilS
*	?	NC_002947	= 1811455	84 (0.950)	7 (0.080)	7/232	NT	7.6%	intergenic (+20/+108)	ispD/PP_1615	2‑C‑methyl‑D‑erythritol 4‑phosphate cytidylyltransferase/LysR family transcriptional regulator
	?	NC_002947	= 1811537	91 (1.090)					intergenic (+102/+26)	ispD/PP_1615	2‑C‑methyl‑D‑erythritol 4‑phosphate cytidylyltransferase/LysR family transcriptional regulator
*	?	NC_002947	= 1821027	0 (0.000)	3 (0.040)	3/236	NT	100%	coding (748/1422 nt)	PP_1624	group II intron‑encoding maturase
	?	NC_002947	= 2070376	NA (NA)					coding (707/1422 nt)	PP_1846	group II intron‑encoding maturase
*	?	NC_002947	= 1838122	122 (1.380)	7 (0.090)	7/226	NT	5.5%	intergenic (+27/+77)	PP_1642/PP_1643	hypothetical protein/membrane protein
	?	NC_002947	= 1838184	129 (1.590)					intergenic (+89/+15)	PP_1642/PP_1643	hypothetical protein/membrane protein
*	?	NC_002947	1844176 =	4 (0.050)	98 (1.150)	70/236	NT	72.9%	coding (660/2754 nt)	gacS	sensor protein GacS
	?	NC_002947	= 2179419	69 (0.810)					intergenic (+175/+93)	PP_1931/PP_5486	hypothetical protein/hypothetical protein
*	?	NC_002947	= 1844179	4 (0.050)	91 (1.060)	67/238	NT	67.7%	coding (657/2754 nt)	gacS	sensor protein GacS
	?	NC_002947	2177745 =	83 (0.970)					intergenic (+103/‑63)	PP_5485/PP_1931	GNAT family acetyltransferase/hypothetical protein
*	?	NC_002947	1860731 =	94 (1.060)	12 (0.140)	10/236	NT	12.2%	coding (248/654 nt)	purN	phosphoribosylglycinamide formyltransferase
	?	NC_002947	1860771 =	83 (0.980)					coding (208/654 nt)	purN	phosphoribosylglycinamide formyltransferase
*	?	NC_002947	= 1896811	63 (0.710)	4 (0.050)	4/228	NT	5.8%	coding (305/318 nt)	sugE	transporter
	?	NC_002947	= 1896838	72 (0.880)					coding (278/318 nt)	sugE	transporter
*	?	NC_002947	= 1899258	108 (1.220)	11 (0.140)	11/226	NT	10.4%	intergenic (+286/‑234)	PP_t18/PP_1703	tRNA‑Asp/assimilatory nitrate reductase/sulfite reductase
	?	NC_002947	= 1899320	90 (1.110)					intergenic (+348/‑172)	PP_t18/PP_1703	tRNA‑Asp/assimilatory nitrate reductase/sulfite reductase
*	?	NC_002947	1899260 =	107 (1.210)	17 (0.220)	10/216	NT	15.8%	intergenic (+288/‑232)	PP_t18/PP_1703	tRNA‑Asp/assimilatory nitrate reductase/sulfite reductase
	?	NC_002947	1899320 =	88 (1.130)					intergenic (+348/‑172)	PP_t18/PP_1703	tRNA‑Asp/assimilatory nitrate reductase/sulfite reductase
*	?	NC_002947	= 1917274	81 (0.910)	8 (0.100)	7/224	NT	9.7%	coding (993/1083 nt)	PP_1718	EAL domain‑containing diguanylate phosphodiesterase
	?	NC_002947	= 1917331	75 (0.930)					coding (936/1083 nt)	PP_1718	EAL domain‑containing diguanylate phosphodiesterase
*	?	NC_002947	1932621 =	100 (1.130)	10 (0.150)	9/190	NT	13.6%	intergenic (‑46/+105)	rluA/minE	bifunctional tRNA pseudouridine(32) synthase TrmQ/ribosomal large subunit pseudouridine synthase RluA/cell division topological specificity factor
	?	NC_002947	1932693 =	50 (0.730)					intergenic (‑118/+33)	rluA/minE	bifunctional tRNA pseudouridine(32) synthase TrmQ/ribosomal large subunit pseudouridine synthase RluA/cell division topological specificity factor
*	?	NC_002947	= 1944558	83 (0.940)	4 (0.050)	4/234	NT	5.0%	intergenic (+16/+246)	actP‑I/PP_1744	acetate permease/hypothetical protein
	?	NC_002947	= 1944594	73 (0.870)					intergenic (+52/+210)	actP‑I/PP_1744	acetate permease/hypothetical protein
*	?	NC_002947	1947818 =	84 (0.950)	5 (0.070)	5/194	NT	7.5%	intergenic (‑36/+134)	PP_1748/PP_1749	hypothetical protein/acetyltransferase
	?	NC_002947	1947937 =	57 (0.820)					intergenic (‑155/+15)	PP_1748/PP_1749	hypothetical protein/acetyltransferase
*	?	NC_002947	= 1962075	69 (0.780)	4 (0.050)	4/236	NT	5.3%	coding (295/1833 nt)	PP_1760	ABC transporter ATP‑binding protein
	?	NC_002947	= 1962088	76 (0.900)					coding (308/1833 nt)	PP_1760	ABC transporter ATP‑binding protein
*	?	NC_002947	1967188 =	14 (0.160)	17 (0.260)	8/180	NT	52.1%	intergenic (+15/+104)	PP_1762/yciK	hypothetical protein/putative oxidoreductase
	?	NC_002947	1967284 =	21 (0.330)					intergenic (+111/+8)	PP_1762/yciK	hypothetical protein/putative oxidoreductase
*	?	NC_002947	= 1967220	13 (0.150)	17 (0.260)	11/180	NT	52.7%	intergenic (+47/+72)	PP_1762/yciK	hypothetical protein/putative oxidoreductase
	?	NC_002947	= 1967250	21 (0.330)					intergenic (+77/+42)	PP_1762/yciK	hypothetical protein/putative oxidoreductase
*	?	NC_002947	1970763 =	75 (0.850)	12 (0.160)	10/206	NT	16.7%	intergenic (+14/‑252)	mtnA/PP_mr25	methylthioribose‑1‑phosphate isomerase/gyrA regulatory region
	?	NC_002947	1970865 =	57 (0.770)					intergenic (+116/‑150)	mtnA/PP_mr25	methylthioribose‑1‑phosphate isomerase/gyrA regulatory region
*	?	NC_002947	= 1970782	71 (0.800)	25 (0.340)	20/206	NT	30.1%	intergenic (+33/‑233)	mtnA/PP_mr25	methylthioribose‑1‑phosphate isomerase/gyrA regulatory region
	?	NC_002947	= 1970844	57 (0.770)					intergenic (+95/‑171)	mtnA/PP_mr25	methylthioribose‑1‑phosphate isomerase/gyrA regulatory region
*	?	NC_002947	2032853 =	NA (NA)	5 (0.060)	5/234	NT	21.7%	coding (291/1665 nt)	pgi‑I	glucose 6‑phosphate isomerase
	?	NC_002947	2032878 =	19 (0.210)					coding (316/1665 nt)	pgi‑I	glucose 6‑phosphate isomerase
*	?	NC_002947	= 2048853	81 (0.910)	6 (0.080)	4/212	NT	8.1%	intergenic (+49/+90)	PP_1821/PP_1822	glutathione S‑transferase family protein/hypothetical protein
	?	NC_002947	= 2048910	66 (0.870)					intergenic (+106/+33)	PP_1821/PP_1822	glutathione S‑transferase family protein/hypothetical protein
*	?	NC_002947	= 2050638	36 (0.410)	13 (0.210)	10/172	NT	29.2%	intergenic (‑88/+87)	PP_1824/PP_1825	Smr domain‑containing protein/hypothetical protein
	?	NC_002947	= 2050674	38 (0.620)					intergenic (‑124/+51)	PP_1824/PP_1825	Smr domain‑containing protein/hypothetical protein
*	?	NC_002947	= 2057866	80 (0.900)	13 (0.180)	11/198	NT	14.1%	intergenic (+39/+89)	PP_1832/PP_1833	oxidase/hypothetical protein
	?	NC_002947	= 2057906	94 (1.320)					intergenic (+79/+49)	PP_1832/PP_1833	oxidase/hypothetical protein
*	?	NC_002947	= 2069977	NA (NA)	14 (0.170)	7/234	NT	NA	coding (308/1422 nt)	PP_1846	group II intron‑encoding maturase
	?	NC_002947	= 2069981	NA (NA)					coding (312/1422 nt)	PP_1846	group II intron‑encoding maturase
*	?	NC_002947	2071951 =	81 (0.910)	10 (0.120)	9/232	NT	12.2%	coding (1500/2133 nt)	PP_1847	TonB‑dependent ferric siderophore receptor
	?	NC_002947	2071986 =	68 (0.810)					coding (1465/2133 nt)	PP_1847	TonB‑dependent ferric siderophore receptor
*	?	NC_002947	2078275 =	69 (0.780)	10 (0.120)	10/232	NT	12.6%	intergenic (+17/+98)	PP_1853/PP_1854	LysR family transcriptional regulator/hypothetical protein
	?	NC_002947	2078372 =	74 (0.890)					intergenic (+114/+1)	PP_1853/PP_1854	LysR family transcriptional regulator/hypothetical protein
*	?	NC_002947	= 2078299	73 (0.820)	10 (0.130)	6/212	NT	13.5%	intergenic (+41/+74)	PP_1853/PP_1854	LysR family transcriptional regulator/hypothetical protein
	?	NC_002947	= 2078346	65 (0.850)					intergenic (+88/+27)	PP_1853/PP_1854	LysR family transcriptional regulator/hypothetical protein
*	?	NC_002947	2085921 =	NA (NA)	5 (0.060)	5/242	NT	NA	intergenic (+587/‑8)	PP_1864/PP_1865	hypothetical protein/transposase
	?	NC_002947	2085966 =	NA (NA)					coding (38/1302 nt)	PP_1865	transposase
*	?	NC_002947	2086286 =	NA (NA)	6 (0.070)	6/230	NT	NA	coding (358/1302 nt)	PP_1865	transposase
	?	NC_002947	2086348 =	NA (NA)					coding (420/1302 nt)	PP_1865	transposase
*	?	NC_002947	= 2086293	NA (NA)	7 (0.080)	6/230	NT	NA	coding (365/1302 nt)	PP_1865	transposase
	?	NC_002947	= 2086339	NA (NA)					coding (411/1302 nt)	PP_1865	transposase
*	?	NC_002947	2086589 =	NA (NA)	11 (0.130)	9/238	NT	NA	coding (661/1302 nt)	PP_1865	transposase
	?	NC_002947	2086620 =	NA (NA)					coding (692/1302 nt)	PP_1865	transposase
*	?	NC_002947	= 2100025	60 (0.680)	16 (0.220)	11/200	NT	20.4%	intergenic (‑93/‑112)	PP_1875/PP_1876	two‑component system sensor histidine kinase/response regulator/AAA family ATP/GTP‑binding protein
	?	NC_002947	= 2100074	76 (1.060)					intergenic (‑142/‑63)	PP_1875/PP_1876	two‑component system sensor histidine kinase/response regulator/AAA family ATP/GTP‑binding protein
*	?	NC_002947	2104141 =	66 (0.750)	4 (0.050)	4/238	NT	5.5%	coding (786/1515 nt)	PP_1879	hypothetical protein
	?	NC_002947	2104172 =	74 (0.860)					coding (755/1515 nt)	PP_1879	hypothetical protein
*	?	NC_002947	= 2192532	70 (0.790)	7 (0.080)	5/236	NT	8.8%	intergenic (+98/‑106)	PP_1937/PP_1938	helicase/hypothetical protein
	?	NC_002947	= 2192547	78 (0.920)					intergenic (+113/‑91)	PP_1937/PP_1938	helicase/hypothetical protein
*	?	NC_002947	= 2236735	75 (0.850)	7 (0.080)	5/236	NT	8.5%	coding (1803/2016 nt)	uvrB	uvrABC excinuclease protein B
	?	NC_002947	= 2236758	78 (0.920)					coding (1826/2016 nt)	uvrB	uvrABC excinuclease protein B
*	?	NC_002947	2236962 =	90 (1.020)	7 (0.090)	6/214	NT	9.0%	intergenic (+14/+114)	uvrB/PP_1975	uvrABC excinuclease protein B/EmrB/QacA family drug resistance transporter
	?	NC_002947	2237053 =	63 (0.820)					intergenic (+105/+23)	uvrB/PP_1975	uvrABC excinuclease protein B/EmrB/QacA family drug resistance transporter
*	?	NC_002947	= 2258102	NA (NA)	4 (0.050)	4/230	NT	8.3%	intergenic (+114/‑278)	PP_1990/asd	transposase/aspartate‑semialdehyde dehydrogenase
	?	NC_002947	= 2258195	47 (0.530)					intergenic (+207/‑185)	PP_1990/asd	transposase/aspartate‑semialdehyde dehydrogenase
*	?	NC_002947	= 2258115	NA (NA)	8 (0.090)	5/238	NT	NA	intergenic (+127/‑265)	PP_1990/asd	transposase/aspartate‑semialdehyde dehydrogenase
	?	NC_002947	= 2258159	NA (NA)					intergenic (+171/‑221)	PP_1990/asd	transposase/aspartate‑semialdehyde dehydrogenase
*	?	NC_002947	= 2271273	98 (1.110)	13 (0.170)	11/214	NT	12.5%	intergenic (+51/‑169)	PP_2002/PP_t31	oxidoreductase/tRNA‑Val
	?	NC_002947	= 2271289	97 (1.260)					intergenic (+67/‑153)	PP_2002/PP_t31	oxidoreductase/tRNA‑Val
*	?	NC_002947	2276019 =	103 (1.160)	6 (0.070)	6/230	NT	5.6%	coding (1346/1644 nt)	PP_2006	membrane protein
	?	NC_002947	2276062 =	106 (1.280)					coding (1303/1644 nt)	PP_2006	membrane protein
*	?	NC_002947	= 2276026	101 (1.140)	8 (0.100)	7/230	NT	7.4%	coding (1339/1644 nt)	PP_2006	membrane protein
	?	NC_002947	= 2276053	106 (1.280)					coding (1312/1644 nt)	PP_2006	membrane protein
*	?	NC_002947	2284448 =	91 (1.030)	7 (0.080)	7/230	NT	6.8%	coding (605/948 nt)	ppnK	inorganic polyphosphate/ATP‑NAD kinase
	?	NC_002947	2284485 =	107 (1.290)					coding (642/948 nt)	ppnK	inorganic polyphosphate/ATP‑NAD kinase
*	?	NC_002947	2286071 =	102 (1.150)	6 (0.070)	6/234	NT	6.2%	coding (313/888 nt)	PP_2014	membrane protein
	?	NC_002947	2286098 =	86 (1.020)					coding (340/888 nt)	PP_2014	membrane protein
*	?	NC_002947	= 2289128	122 (1.380)	6 (0.070)	6/236	NT	5.2%	coding (1368/2658 nt)	pepN	aminopeptidase N
	?	NC_002947	= 2289154	101 (1.190)					coding (1394/2658 nt)	pepN	aminopeptidase N
*	?	NC_002947	= 2295816	78 (0.880)	7 (0.080)	6/236	NT	9.3%	intergenic (+19/+114)	PP_5496/PP_2023	hypothetical protein/glutathione S‑transferase family protein
	?	NC_002947	= 2295903	62 (0.730)					intergenic (+106/+27)	PP_5496/PP_2023	hypothetical protein/glutathione S‑transferase family protein
*	?	NC_002947	2295818 =	77 (0.870)	17 (0.240)	12/198	NT	21.8%	intergenic (+21/+112)	PP_5496/PP_2023	hypothetical protein/glutathione S‑transferase family protein
	?	NC_002947	2295903 =	60 (0.840)					intergenic (+106/+27)	PP_5496/PP_2023	hypothetical protein/glutathione S‑transferase family protein
*	?	NC_002947	2301496 =	43 (0.490)	39 (0.450)	34/240	NT	48.2%	intergenic (‑97/‑234)	sbcD/PP_5497	exonuclease subunit SbcD/rhs repeat‑associated core domain‑containing protein
	?	NC_002947	2925472 =	NA (NA)					intergenic (‑177/+388)	PP_2563/PP_2564	antibiotic biosynthesis protein/quercetin 2,3‑dioxygenase
*	?	NC_002947	= 2301497	44 (0.500)	47 (0.540)	39/242	NT	52.1%	intergenic (‑98/‑233)	sbcD/PP_5497	exonuclease subunit SbcD/rhs repeat‑associated core domain‑containing protein
	?	NC_002947	5545369 =	NA (NA)					intergenic (‑461/+416)	rpsF/rlmB	30S ribosomal protein S6/23S rRNA (guanosine(2251)‑2'‑O)‑methyltransferase RlmB
*	?	NC_002947	2301539 =	51 (0.580)	6 (0.080)	5/218	NT	10.7%	intergenic (‑140/‑191)	sbcD/PP_5497	exonuclease subunit SbcD/rhs repeat‑associated core domain‑containing protein
	?	NC_002947	2301624 =	55 (0.700)					intergenic (‑225/‑106)	sbcD/PP_5497	exonuclease subunit SbcD/rhs repeat‑associated core domain‑containing protein
*	?	NC_002947	= 2331393	75 (0.850)	4 (0.050)	4/228	NT	5.3%	coding (1703/1776 nt)	PP_2048	acyl‑CoA dehydrogenase
	?	NC_002947	= 2331416	74 (0.900)					coding (1726/1776 nt)	PP_2048	acyl‑CoA dehydrogenase
*	?	NC_002947	= 2340774	64 (0.720)	9 (0.110)	9/238	NT	11.9%	intergenic (+65/‑50)	dctA‑II/yraO	C4‑dicarboxylate transport protein/transporter YraO
	?	NC_002947	= 2340789	71 (0.830)					intergenic (+80/‑35)	dctA‑II/yraO	C4‑dicarboxylate transport protein/transporter YraO
*	?	NC_002947	= 2347864	78 (0.880)	4 (0.050)	4/236	NT	5.2%	coding (28/3084 nt)	PP_2065	multidrug RND transporter
	?	NC_002947	= 2347874	71 (0.840)					coding (38/3084 nt)	PP_2065	multidrug RND transporter
*	?	NC_002947	2353681 =	81 (0.910)	6 (0.070)	6/236	NT	7.2%	coding (894/1278 nt)	PP_2068	multidrug MFS transporter membrane fusion protein
	?	NC_002947	2353703 =	77 (0.910)					coding (872/1278 nt)	PP_2068	multidrug MFS transporter membrane fusion protein
*	?	NC_002947	2378516 =	74 (0.840)	4 (0.050)	4/232	NT	5.1%	coding (28/273 nt)	PP_2086	CrfX family protein
	?	NC_002947	2378589 =	80 (0.960)					coding (101/273 nt)	PP_2086	CrfX family protein
*	?	NC_002947	2414865 =	98 (1.110)	9 (0.100)	5/242	NT	8.5%	coding (20/198 nt)	PP_2115	hypothetical protein
	?	NC_002947	= 4908127	NA (NA)					intergenic (‑58/‑224)	PP_4317/PP_4318	hypothetical protein/transposase
*	?	NC_002947	= 2418899	65 (0.730)	10 (0.120)	9/234	NT	13.8%	coding (7/1668 nt)	ctpH	methyl‑accepting chemotaxis protein CtpH
	?	NC_002947	= 2418908	63 (0.750)					coding (16/1668 nt)	ctpH	methyl‑accepting chemotaxis protein CtpH
*	?	NC_002947	2425301 =	77 (0.870)	5 (0.060)	5/232	NT	6.1%	coding (869/930 nt)	yegS	lipid kinase
	?	NC_002947	2425333 =	81 (0.970)					coding (901/930 nt)	yegS	lipid kinase
*	?	NC_002947	= 2436708	103 (1.160)	5 (0.070) +30 bp	4/186	NT	6.8%	intergenic (+243/‑416)	PP_2134/fadB	transposase/enoyl‑CoA hydratase/3‑hydroxyacyl‑CoA dehydrogenase
	?	NC_002947	= 3973164	79 (0.890)					intergenic (+158/+27)	PP_3502/PP_3503	transposase/sigma‑54 dependent transcriptional regulator
*	?	NC_002947	2442690 =	65 (0.730)	4 (0.050)	4/230	NT	6.3%	coding (1785/2610 nt)	topA	DNA topoisomerase I
	?	NC_002947	2442731 =	58 (0.700)					coding (1826/2610 nt)	topA	DNA topoisomerase I
*	?	NC_002947	2456877 =	118 (1.330)	14 (0.200)	9/194	NT	15.1%	intergenic (+85/‑96)	gapB/PP_2150	glyceraldehyde‑3‑phosphate dehydrogenase/thiamine biosynthesis lipoprotein
	?	NC_002947	2456941 =	65 (0.930)					intergenic (+149/‑32)	gapB/PP_2150	glyceraldehyde‑3‑phosphate dehydrogenase/thiamine biosynthesis lipoprotein
*	?	NC_002947	2457379 =	92 (1.040)	5 (0.060)	7/244	NT	5.4%	coding (407/999 nt)	PP_2150	thiamine biosynthesis lipoprotein
	?	NC_002947	2457401 =	85 (0.970)					coding (429/999 nt)	PP_2150	thiamine biosynthesis lipoprotein
*	?	NC_002947	= 2461453	97 (1.100)	6 (0.070)	6/238	NT	6.1%	coding (409/1251 nt)	lolC	lipoprotein releasing system transmembrane protein LolC
	?	NC_002947	= 2461470	92 (1.070)					coding (426/1251 nt)	lolC	lipoprotein releasing system transmembrane protein LolC
*	?	NC_002947	= 2472183	54 (0.610)	8 (0.130)	6/168	NT	15.4%	intergenic (+44/+105)	PP_2166/PP_2167	anti‑anti‑sigma factor/PhoD‑like phosphatase
	?	NC_002947	= 2472229	51 (0.850)					intergenic (+90/+59)	PP_2166/PP_2167	anti‑anti‑sigma factor/PhoD‑like phosphatase
*	?	NC_002947	2505513 =	79 (0.890)	8 (0.090)	7/236	NT	9.4%	coding (70/1107 nt)	PP_2199	hypothetical protein
	?	NC_002947	2505545 =	78 (0.920)					coding (102/1107 nt)	PP_2199	hypothetical protein
*	?	NC_002947	= 2568662	95 (1.070)	6 (0.070)	5/234	NT	6.1%	coding (929/1050 nt)	PP_2252	hypothetical protein
	?	NC_002947	= 2568673	93 (1.100)					coding (918/1050 nt)	PP_2252	hypothetical protein
*	?	NC_002947	2626249 =	89 (1.010)	13 (0.160)	11/228	NT	13.7%	intergenic (+9/‑141)	PP_t40/PP_2298	tRNA‑His/hypothetical protein
	?	NC_002947	2626282 =	81 (0.990)					intergenic (+42/‑108)	PP_t40/PP_2298	tRNA‑His/hypothetical protein
*	?	NC_002947	= 2628325	90 (1.020)	6 (0.070)	8/224	NT	6.4%	intergenic (+35/‑57)	tig/clpP	trigger factor/ATP‑dependent Clp protease proteolytic subunit
	?	NC_002947	= 2628331	93 (1.150)					intergenic (+41/‑51)	tig/clpP	trigger factor/ATP‑dependent Clp protease proteolytic subunit
*	?	NC_002947	2642479 =	93 (1.050)	5 (0.060)	5/238	NT	5.5%	coding (699/1407 nt)	PP_2312	lytic transglycosylase family protein
	?	NC_002947	2642525 =	82 (0.960)					coding (745/1407 nt)	PP_2312	lytic transglycosylase family protein
*	?	NC_002947	2651868 =	82 (0.930)	9 (0.110)	9/238	NT	9.7%	coding (593/1113 nt)	aroF‑I	tyr‑sensitive phospho‑2‑dehydro‑3‑deoxyheptonate aldolase
	?	NC_002947	2651914 =	88 (1.030)					coding (547/1113 nt)	aroF‑I	tyr‑sensitive phospho‑2‑dehydro‑3‑deoxyheptonate aldolase
*	?	NC_002947	2656970 =	85 (0.960)	6 (0.070)	6/240	NT	6.8%	coding (685/1341 nt)	pabB	aminodeoxychorismate synthase/para‑aminobenzoate synthase multi‑enzyme complex
	?	NC_002947	2657003 =	82 (0.950)					coding (652/1341 nt)	pabB	aminodeoxychorismate synthase/para‑aminobenzoate synthase multi‑enzyme complex
*	?	NC_002947	2660074 =	87 (0.980)	4 (0.050)	4/228	NT	5.3%	coding (305/1536 nt)	PP_2331	membrane protein
	?	NC_002947	2660112 =	62 (0.760)					coding (267/1536 nt)	PP_2331	membrane protein
*	?	NC_002947	2664051 =	84 (0.950)	7 (0.100)	6/198	NT	9.2%	intergenic (+33/‑130)	prpC/acnA‑II	methylcitrate synthase/aconitate hydratase
	?	NC_002947	2664132 =	70 (0.980)					intergenic (+114/‑49)	prpC/acnA‑II	methylcitrate synthase/aconitate hydratase
*	?	NC_002947	= 2664726	71 (0.800)	6 (0.070)	5/236	NT	7.5%	coding (546/2589 nt)	acnA‑II	aconitate hydratase
	?	NC_002947	= 2664743	79 (0.930)					coding (563/2589 nt)	acnA‑II	aconitate hydratase
*	?	NC_002947	2687631 =	81 (0.910)	5 (0.060)	5/230	NT	6.4%	coding (134/2388 nt)	PP_2354	two‑component system sensor histidine kinase/response regulator
	?	NC_002947	2687656 =	70 (0.850)					coding (109/2388 nt)	PP_2354	two‑component system sensor histidine kinase/response regulator
*	?	NC_002947	2688155 =	96 (1.080)	5 (0.060)	5/236	NT	5.3%	coding (85/462 nt)	PP_2355	two‑component system response regulator
	?	NC_002947	2688182 =	85 (1.000)					coding (58/462 nt)	PP_2355	two‑component system response regulator
*	?	NC_002947	2694280 =	87 (0.980)	5 (0.060)	5/238	NT	5.8%	coding (528/2394 nt)	PP_2362	usher protein
	?	NC_002947	2694299 =	79 (0.920)					coding (547/2394 nt)	PP_2362	usher protein
*	?	NC_002947	= 2708671	59 (0.670)	5 (0.060)	5/236	NT	7.8%	coding (581/1653 nt)	cysI	sulfite reductase hemoprotein subunit beta
	?	NC_002947	= 2708683	62 (0.730)					coding (569/1653 nt)	cysI	sulfite reductase hemoprotein subunit beta
*	?	NC_002947	2726286 =	83 (0.940)	4 (0.050)	4/234	NT	5.0%	coding (413/1083 nt)	PP_2387	hypothetical protein
	?	NC_002947	2726323 =	72 (0.860)					coding (376/1083 nt)	PP_2387	hypothetical protein
*	?	NC_002947	= 2746368	59 (0.670)	4 (0.050)	4/230	NT	6.8%	intergenic (‑13/+157)	PP_2401/PP_2402	membrane protein/sensor histidine kinase
	?	NC_002947	= 2746383	55 (0.660)					intergenic (‑28/+142)	PP_2401/PP_2402	membrane protein/sensor histidine kinase
*	?	NC_002947	2755117 =	85 (0.960)	10 (0.120)	10/232	NT	11.6%	coding (1400/3147 nt)	czcA‑II	cation efflux system protein
	?	NC_002947	2755142 =	73 (0.870)					coding (1425/3147 nt)	czcA‑II	cation efflux system protein
*	?	NC_002947	= 2755434	102 (1.150)	10 (0.120)	9/238	NT	9.2%	coding (1717/3147 nt)	czcA‑II	cation efflux system protein
	?	NC_002947	= 2755453	98 (1.140)					coding (1736/3147 nt)	czcA‑II	cation efflux system protein
*	?	NC_002947	2771815 =	74 (0.840)	5 (0.060)	5/232	NT	6.8%	coding (472/546 nt)	PP_2424	2'‑5' RNA ligase
	?	NC_002947	2771845 =	68 (0.810)					coding (502/546 nt)	PP_2424	2'‑5' RNA ligase
*	?	NC_002947	= 2800190	59 (0.670)	6 (0.070)	6/230	NT	9.7%	coding (144/1089 nt)	ansB	glutaminase‑asparaginase
	?	NC_002947	= 2800203	56 (0.680)					coding (131/1089 nt)	ansB	glutaminase‑asparaginase
*	?	NC_002947	= 2844227	111 (1.250)	6 (0.070)	6/230	NT	5.3%	coding (457/1005 nt)	PP_2495	hypothetical protein
	?	NC_002947	= 2844238	111 (1.340)					coding (446/1005 nt)	PP_2495	hypothetical protein
*	?	NC_002947	2844402 =	80 (0.900)	4 (0.050)	4/238	NT	5.2%	coding (282/1005 nt)	PP_2495	hypothetical protein
	?	NC_002947	2844429 =	68 (0.790)					coding (255/1005 nt)	PP_2495	hypothetical protein
*	?	NC_002947	2901013 =	69 (0.780)	5 (0.060)	5/232	NT	7.2%	coding (52/1908 nt)	quiC	3‑dehydroshikimate dehydratase
	?	NC_002947	2901061 =	63 (0.750)					coding (100/1908 nt)	quiC	3‑dehydroshikimate dehydratase
*	?	NC_002947	2906132 =	70 (0.790)	5 (0.060)	4/236	NT	6.5%	coding (1294/1359 nt)	PP_2558	outer membrane efflux protein
	?	NC_002947	2906156 =	76 (0.900)					coding (1270/1359 nt)	PP_2558	outer membrane efflux protein
*	?	NC_002947	2933558 =	91 (1.030)	6 (0.070)	4/240	NT	5.8%	coding (587/4890 nt)	PP_2566	leucine‑rich repeat‑containing protein
	?	NC_002947	2933595 =	105 (1.220)					coding (550/4890 nt)	PP_2566	leucine‑rich repeat‑containing protein
*	?	NC_002947	= 2942260	98 (1.110)	11 (0.130)	8/236	NT	10.4%	intergenic (‑18/‑1355)	PP_2575/PP_2577	hypothetical protein/paraquat‑inducible protein B
	?	NC_002947	= 2942265	96 (1.130)					intergenic (‑23/‑1350)	PP_2575/PP_2577	hypothetical protein/paraquat‑inducible protein B
*	?	NC_002947	= 2947591	97 (1.100)	7 (0.080)	6/234	NT	6.8%	intergenic (‑27/‑185)	yijP/PP_2580	phosphoethanolamine transferase CptA/hypothetical protein
	?	NC_002947	= 2947604	101 (1.200)					intergenic (‑40/‑172)	yijP/PP_2580	phosphoethanolamine transferase CptA/hypothetical protein
*	?	NC_002947	2957115 =	73 (0.820)	13 (0.170)	12/216	NT	16.1%	intergenic (+27/‑169)	PP_2588/PP_2589	class III aminotransferase/aldehyde dehydrogenase family protein
	?	NC_002947	2957202 =	71 (0.910)					intergenic (+114/‑82)	PP_2588/PP_2589	class III aminotransferase/aldehyde dehydrogenase family protein
*	?	NC_002947	2957936 =	84 (0.950)	7 (0.080)	7/238	NT	8.6%	coding (653/1494 nt)	PP_2589	aldehyde dehydrogenase family protein
	?	NC_002947	2957964 =	67 (0.780)					coding (681/1494 nt)	PP_2589	aldehyde dehydrogenase family protein
*	?	NC_002947	2987469 =	NA (NA)	8 (0.100)	8/234	NT	NA	coding (973/2991 nt)	PP_2612	membrane protein
	?	NC_002947	2987491 =	NA (NA)					coding (951/2991 nt)	PP_2612	membrane protein
*	?	NC_002947	= 2992148	NA (NA)	9 (0.110)	6/236	NT	NA	intergenic (‑36/+98)	hcpC‑I/PP_2616	hemolysin‑coregulated protein/hypothetical protein
	?	NC_002947	= 2992160	NA (NA)					intergenic (‑48/+86)	hcpC‑I/PP_2616	hemolysin‑coregulated protein/hypothetical protein
*	?	NC_002947	= 3012722	109 (1.230)	7 (0.090)	6/224	NT	6.8%	coding (130/219 nt)	PP_2633	hypothetical protein
	?	NC_002947	= 3012743	92 (1.140)					coding (151/219 nt)	PP_2633	hypothetical protein
*	?	NC_002947	3029319 =	103 (1.160)	7 (0.080)	7/242	NT	6.5%	coding (929/1653 nt)	pcaY	aromatic acid chemoreceptor
	?	NC_002947	3029358 =	99 (1.140)					coding (968/1653 nt)	pcaY	aromatic acid chemoreceptor
*	?	NC_002947	= 3070506	96 (1.080)	16 (0.190)	15/234	NT	15.4%	intergenic (+31/‑323)	aldB‑II/pqqD‑II	aldehyde dehydrogenase/coenzyme PQQ synthesis protein D
	?	NC_002947	= 3070554	85 (1.010)					intergenic (+79/‑275)	aldB‑II/pqqD‑II	aldehyde dehydrogenase/coenzyme PQQ synthesis protein D
*	?	NC_002947	3117438 =	88 (0.990)	6 (0.070)	5/232	NT	6.9%	coding (1187/1188 nt)	cfa	cyclopropane‑fatty‑acyl‑phospholipid synthase
	?	NC_002947	3117473 =	78 (0.930)					coding (1152/1188 nt)	cfa	cyclopropane‑fatty‑acyl‑phospholipid synthase
*	?	NC_002947	3159140 =	105 (1.190)	8 (0.100)	7/234	NT	7.3%	coding (1116/2097 nt)	opuA	glycine betaine ABC transporter ATP‑binding protein/permease
	?	NC_002947	3159173 =	102 (1.210)					coding (1149/2097 nt)	opuA	glycine betaine ABC transporter ATP‑binding protein/permease
*	?	NC_002947	3164984 =	104 (1.170)	5 (0.060)	5/234	NT	5.1%	coding (452/1083 nt)	PP_2779	putative Beta‑ketoacyl synthase
	?	NC_002947	3164999 =	89 (1.060)					coding (467/1083 nt)	PP_2779	putative Beta‑ketoacyl synthase
*	?	NC_002947	= 3214891	70 (0.790)	5 (0.060)	5/228	NT	6.4%	coding (763/3129 nt)	mexD	multidrug RND transporter MexD
	?	NC_002947	= 3214924	81 (0.990)					coding (796/3129 nt)	mexD	multidrug RND transporter MexD
*	?	NC_002947	3222480 =	100 (1.130)	10 (0.120)	8/236	NT	10.5%	coding (257/1653 nt)	PP_2823	methyl‑accepting chemotaxis transducer
	?	NC_002947	3222520 =	74 (0.870)					coding (217/1653 nt)	PP_2823	methyl‑accepting chemotaxis transducer
*	?	NC_002947	3251122 =	96 (1.080)	8 (0.090)	4/238	NT	8.3%	coding (464/546 nt)	ureJ	urease accessory protein UreJ
	?	NC_002947	3251156 =	84 (0.980)					coding (498/546 nt)	ureJ	urease accessory protein UreJ
*	?	NC_002947	3264121 =	101 (1.140)	7 (0.080)	7/236	NT	7.0%	coding (469/1635 nt)	PP_2861	methyl‑accepting chemotaxis transducer
	?	NC_002947	3264139 =	90 (1.060)					coding (451/1635 nt)	PP_2861	methyl‑accepting chemotaxis transducer
*	?	NC_002947	3282016 =	83 (0.940)	7 (0.080)	7/232	NT	8.8%	coding (495/615 nt)	PP_2882	2‑hydroxychromene‑2‑carboxylate isomerase
	?	NC_002947	3282040 =	66 (0.790)					coding (519/615 nt)	PP_2882	2‑hydroxychromene‑2‑carboxylate isomerase
*	?	NC_002947	3319164 =	117 (1.320)	8 (0.100)	8/224	NT	7.4%	intergenic (‑85/+107)	treSA/PP_2919	trehalose synthase A/LysR family transcriptional regulator
	?	NC_002947	3319249 =	93 (1.150)					intergenic (‑170/+22)	treSA/PP_2919	trehalose synthase A/LysR family transcriptional regulator
*	?	NC_002947	= 3329641	77 (0.870)	8 (0.100)	9/226	NT	9.5%	intergenic (+102/+29)	PP_2927/PP_2928	hypothetical protein/saccharopine dehydrogenase
	?	NC_002947	= 3329651	82 (1.010)					intergenic (+112/+19)	PP_2927/PP_2928	hypothetical protein/saccharopine dehydrogenase
*	?	NC_002947	3333247 =	60 (0.680)	4 (0.050)	4/234	NT	6.2%	coding (602/705 nt)	PP_2931	hypothetical protein
	?	NC_002947	3333278 =	65 (0.770)					coding (571/705 nt)	PP_2931	hypothetical protein
*	?	NC_002947	= 3400640	57 (0.640)	8 (0.100)	8/234	NT	11.8%	intergenic (‑28/+76)	PP_3006/PP_3007	ECF family RNA polymerase sigma‑70 factor/hypothetical protein
	?	NC_002947	= 3400664	65 (0.770)					intergenic (‑52/+52)	PP_3006/PP_3007	ECF family RNA polymerase sigma‑70 factor/hypothetical protein
*	?	NC_002947	3462544 =	93 (1.050)	7 (0.090)	7/228	NT	7.6%	coding (1857/1929 nt)	PP_3078	ABC transporter substrate‑binding protein
	?	NC_002947	3462574 =	83 (1.010)					coding (1827/1929 nt)	PP_3078	ABC transporter substrate‑binding protein
*	?	NC_002947	= 3464323	97 (1.100)	7 (0.100)	7/198	NT	7.5%	coding (78/1929 nt)	PP_3078	ABC transporter substrate‑binding protein
	?	NC_002947	= 3464362	94 (1.320)					coding (39/1929 nt)	PP_3078	ABC transporter substrate‑binding protein
*	?	NC_002947	= 3487373	92 (1.040)	6 (0.070)	6/242	NT	6.2%	coding (681/1344 nt)	PP_3093	hypothetical protein
	?	NC_002947	= 3487394	91 (1.040)					coding (660/1344 nt)	PP_3093	hypothetical protein
*	?	NC_002947	= 3497430	76 (0.860)	5 (0.060)	4/230	NT	6.5%	coding (210/765 nt)	PP_5562	hypothetical protein
	?	NC_002947	= 3497437	73 (0.880)					coding (203/765 nt)	PP_5562	hypothetical protein
*	?	NC_002947	= 3511582	88 (0.990)	7 (0.080)	6/232	NT	7.1%	coding (207/4158 nt)	PP_3108	rhs family protein
	?	NC_002947	= 3511612	100 (1.200)					coding (237/4158 nt)	PP_3108	rhs family protein
*	?	NC_002947	3525355 =	83 (0.940)	5 (0.060)	5/232	NT	6.7%	intergenic (+163/‑243)	PP_3115/lexA‑II	transposase/transcriptional repressor
	?	NC_002947	3525403 =	62 (0.740)					intergenic (+211/‑195)	PP_3115/lexA‑II	transposase/transcriptional repressor
*	?	NC_002947	= 3588159	61 (0.690)	13 (0.180)	8/206	NT	18.1%	intergenic (+37/‑38)	catA‑II/benE‑II	catechol 1,2‑dioxygenase/benzoate transport protein
	?	NC_002947	= 3588187	67 (0.910)					intergenic (+65/‑10)	catA‑II/benE‑II	catechol 1,2‑dioxygenase/benzoate transport protein
*	?	NC_002947	= 3610388	78 (0.880)	6 (0.070)	5/234	NT	7.5%	coding (3339/3396 nt)	mcoA	Mn(II) copper oxidase A
	?	NC_002947	= 3610420	74 (0.880)					coding (3307/3396 nt)	mcoA	Mn(II) copper oxidase A
*	?	NC_002947	= 3617810	74 (0.840)	6 (0.070)	6/242	NT	7.5%	coding (792/1170 nt)	PP_3188	hypothetical protein
	?	NC_002947	= 3617848	75 (0.860)					coding (830/1170 nt)	PP_3188	hypothetical protein
*	?	NC_002947	3619873 =	97 (1.100)	6 (0.070)	4/232	NT	6.3%	coding (523/948 nt)	PP_3190	ornithine cyclodeaminase/mu‑crystallin family protein
	?	NC_002947	3619907 =	87 (1.040)					coding (489/948 nt)	PP_3190	ornithine cyclodeaminase/mu‑crystallin family protein
*	?	NC_002947	= 3621157	96 (1.080)	5 (0.060)	5/240	NT	5.0%	coding (288/1053 nt)	PP_3191	threonine ammonia‑lyase/dehydratase
	?	NC_002947	= 3621180	95 (1.100)					coding (265/1053 nt)	PP_3191	threonine ammonia‑lyase/dehydratase
*	?	NC_002947	= 3622266	111 (1.250)	11 (0.140)	9/222	NT	9.4%	intergenic (‑186/+40)	PP_3192/PP_3193	hypothetical protein/hypothetical protein
	?	NC_002947	= 3622288	111 (1.390)					intergenic (‑208/+18)	PP_3192/PP_3193	hypothetical protein/hypothetical protein
*	?	NC_002947	= 3649432	83 (0.940)	5 (0.060)	4/234	NT	6.3%	intergenic (+866/+825)	PP_3214/PP_3216	hypothetical protein/cysteine dioxygenase
	?	NC_002947	= 3649458	71 (0.840)					intergenic (+892/+799)	PP_3214/PP_3216	hypothetical protein/cysteine dioxygenase
*	?	NC_002947	= 3685701	63 (0.710)	6 (0.070)	5/230	NT	8.7%	coding (66/1332 nt)	PP_3251	hypothetical protein
	?	NC_002947	= 3685720	67 (0.810)					coding (85/1332 nt)	PP_3251	hypothetical protein
*	?	NC_002947	= 3723725	88 (0.990)	9 (0.110)	8/228	NT	9.8%	intergenic (+12/+18)	PP_3288/PP_3289	universal stress protein family protein/acetyltransferase
	?	NC_002947	= 3723729	84 (1.020)					intergenic (+16/+14)	PP_3288/PP_3289	universal stress protein family protein/acetyltransferase
*	?	NC_002947	= 3743810	75 (0.850)	6 (0.070)	5/234	NT	7.6%	coding (51/1002 nt)	paoB	aromatic aldehyde dehydrogenase FAD‑binding subunit
	?	NC_002947	= 3743823	74 (0.880)					coding (64/1002 nt)	paoB	aromatic aldehyde dehydrogenase FAD‑binding subunit
*	?	NC_002947	3758150 =	113 (1.280)	8 (0.100)	6/230	NT	7.2%	coding (420/1002 nt)	hemBB	porphobilinogen synthase
	?	NC_002947	3758188 =	100 (1.210)					coding (458/1002 nt)	hemBB	porphobilinogen synthase
*	?	NC_002947	= 3758842	69 (0.780)	5 (0.060)	5/234	NT	6.7%	coding (64/612 nt)	PP_3323	CobW/P47K family protein
	?	NC_002947	= 3758849	74 (0.880)					coding (71/612 nt)	PP_3323	CobW/P47K family protein
*	?	NC_002947	3768425 =	85 (0.960)	5 (0.060)	5/238	NT	5.9%	intergenic (+7/‑32)	PP_5600/PP_3330	hypothetical protein/ferric siderophore receptor
	?	NC_002947	3768460 =	76 (0.890)					coding (4/2187 nt)	PP_3330	ferric siderophore receptor
*	?	NC_002947	3775020 =	85 (0.960)	10 (0.120)	7/232	NT	10.6%	intergenic (‑4/+47)	PP_3335/PP_3336	hypothetical protein/hypothetical protein
	?	NC_002947	3775055 =	88 (1.050)					intergenic (‑39/+12)	PP_3335/PP_3336	hypothetical protein/hypothetical protein
*	?	NC_002947	3775460 =	71 (0.800)	8 (0.100)	6/234	NT	11.0%	coding (60/453 nt)	PP_3336	hypothetical protein
	?	NC_002947	3775487 =	62 (0.740)					coding (33/453 nt)	PP_3336	hypothetical protein
*	?	NC_002947	3778552 =	92 (1.040)	5 (0.060)	5/224	NT	6.0%	coding (1563/2052 nt)	PP_3340	TonB‑dependent receptor
	?	NC_002947	3778597 =	74 (0.920)					coding (1608/2052 nt)	PP_3340	TonB‑dependent receptor
*	?	NC_002947	3779669 =	97 (1.100)	7 (0.080)	5/236	NT	7.3%	coding (77/1575 nt)	nikA	nickel ABC transporter substrate‑binding protein
	?	NC_002947	3779702 =	85 (1.000)					coding (110/1575 nt)	nikA	nickel ABC transporter substrate‑binding protein
*	?	NC_002947	3795242 =	83 (0.940)	4 (0.050)	4/230	NT	5.1%	coding (1255/1884 nt)	fcs	feruloyl‑CoA‑synthetase
	?	NC_002947	3795276 =	71 (0.860)					coding (1221/1884 nt)	fcs	feruloyl‑CoA‑synthetase
*	?	NC_002947	3795962 =	83 (0.940)	8 (0.090)	5/240	NT	8.6%	coding (535/1884 nt)	fcs	feruloyl‑CoA‑synthetase
	?	NC_002947	3795995 =	90 (1.040)					coding (502/1884 nt)	fcs	feruloyl‑CoA‑synthetase
*	?	NC_002947	3806613 =	105 (1.190)	9 (0.110)	8/234	NT	8.3%	coding (1186/2544 nt)	PP_3364	two‑component system response regulator
	?	NC_002947	3806646 =	98 (1.160)					coding (1219/2544 nt)	PP_3364	two‑component system response regulator
*	?	NC_002947	3814582 =	71 (0.800)	4 (0.050)	4/238	NT	5.7%	coding (668/996 nt)	yajO	2‑carboxybenzaldehyde reductase
	?	NC_002947	3814603 =	64 (0.750)					coding (689/996 nt)	yajO	2‑carboxybenzaldehyde reductase
*	?	NC_002947	= 3837243	71 (0.800)	4 (0.050)	4/232	NT	5.2%	coding (795/2673 nt)	PP_3388	hypothetical protein
	?	NC_002947	= 3837267	80 (0.960)					coding (819/2673 nt)	PP_3388	hypothetical protein
*	?	NC_002947	= 3844183	72 (0.810)	7 (0.080)	6/236	NT	8.7%	coding (540/1191 nt)	PP_3393	CAIB/BAIF family protein
	?	NC_002947	= 3844210	77 (0.910)					coding (513/1191 nt)	PP_3393	CAIB/BAIF family protein
*	?	NC_002947	= 3878328	70 (0.790)	5 (0.060)	5/236	NT	6.8%	coding (119/3180 nt)	mexF	multidrug RND transporter MexF
	?	NC_002947	= 3878357	69 (0.810)					coding (148/3180 nt)	mexF	multidrug RND transporter MexF
*	?	NC_002947	= 3883664	98 (1.110)	6 (0.070)	6/228	NT	5.7%	coding (639/1056 nt)	PP_3428	TPR repeat‑containing protein
	?	NC_002947	= 3883685	106 (1.290)					coding (660/1056 nt)	PP_3428	TPR repeat‑containing protein
*	?	NC_002947	= 3886959	59 (0.670)	13 (0.150)	11/246	NT	16.7%	coding (942/2118 nt)	PP_3430	two‑component system sensor histidine kinase/response regulator
	?	NC_002947	3963919 =	71 (0.800)					coding (129/933 nt)	PP_3493	LysR family transcriptional regulator
*	?	NC_002947	= 3917025	77 (0.870)	7 (0.080)	6/230	NT	8.4%	coding (763/3129 nt)	mexB	multidrug resistance protein MexB
	?	NC_002947	= 3917056	80 (0.970)					coding (794/3129 nt)	mexB	multidrug resistance protein MexB
*	?	NC_002947	3924740 =	70 (0.790)	7 (0.080)	7/240	NT	9.0%	coding (118/1431 nt)	peaB	quinohemoprotein amine dehydrogenase modification protein
	?	NC_002947	3924770 =	73 (0.850)					coding (88/1431 nt)	peaB	quinohemoprotein amine dehydrogenase modification protein
*	?	NC_002947	3947957 =	30 (0.340)	6 (0.090)	5/190	NT	18.4%	coding (136/1797 nt)	PP_3483	type II secretion system protein
	?	NC_002947	3948042 =	30 (0.440)					coding (51/1797 nt)	PP_3483	type II secretion system protein
*	?	NC_002947	= 3947984	30 (0.340)	8 (0.120)	8/190	NT	23.1%	coding (109/1797 nt)	PP_3483	type II secretion system protein
	?	NC_002947	= 3948013	30 (0.440)					coding (80/1797 nt)	PP_3483	type II secretion system protein
*	?	NC_002947	3951494 =	70 (0.790)	7 (0.080)	6/232	NT	9.9%	coding (447/666 nt)	PP_3487	hypothetical protein
	?	NC_002947	3951537 =	62 (0.740)					coding (404/666 nt)	PP_3487	hypothetical protein
*	?	NC_002947	= 3963032	61 (0.690)	4 (0.050)	4/224	NT	6.6%	intergenic (+34/+83)	PP_3492/PP_3493	acyl‑CoA dehydrogenase/LysR family transcriptional regulator
	?	NC_002947	= 3963072	57 (0.710)					intergenic (+74/+43)	PP_3492/PP_3493	acyl‑CoA dehydrogenase/LysR family transcriptional regulator
*	?	NC_002947	3991884 =	87 (0.980)	6 (0.070)	6/230	NT	6.8%	coding (1229/1446 nt)	PP_3518	hypothetical protein
	?	NC_002947	3991921 =	84 (1.020)					coding (1192/1446 nt)	PP_3518	hypothetical protein
*	?	NC_002947	3996848 =	92 (1.040)	6 (0.070)	4/234	NT	6.1%	coding (359/480 nt)	PP_3525	hypothetical protein
	?	NC_002947	3996892 =	96 (1.140)					coding (315/480 nt)	PP_3525	hypothetical protein
*	?	NC_002947	= 4003395	86 (0.970)	6 (0.070)	6/232	NT	6.9%	intergenic (+9/+74)	PP_3531/PP_3532	hypothetical protein/AsnC family transcriptional regulator
	?	NC_002947	= 4003419	81 (0.970)					intergenic (+33/+50)	PP_3531/PP_3532	hypothetical protein/AsnC family transcriptional regulator
*	?	NC_002947	= 4012772	71 (0.800)	4 (0.050)	4/232	NT	5.0%	coding (564/900 nt)	mvaB	hydroxymethylglutaryl‑CoA lyase
	?	NC_002947	= 4012789	84 (1.010)					coding (581/900 nt)	mvaB	hydroxymethylglutaryl‑CoA lyase
*	?	NC_002947	= 4021749	69 (0.780)	4 (0.050)	4/234	NT	5.0%	coding (601/942 nt)	PP_3547	NAD(P)‑binding oxidoreductase
	?	NC_002947	= 4021806	85 (1.010)					coding (544/942 nt)	PP_3547	NAD(P)‑binding oxidoreductase
*	?	NC_002947	= 4032872	77 (0.870)	5 (0.060)	5/234	NT	5.8%	coding (466/1008 nt)	PP_3555	transmembrane sensor
	?	NC_002947	= 4032894	88 (1.050)					coding (488/1008 nt)	PP_3555	transmembrane sensor
*	?	NC_002947	= 4043407	87 (0.980)	5 (0.060)	4/236	NT	5.4%	coding (381/978 nt)	PP_3564	AraC family transcriptional regulator
	?	NC_002947	= 4043426	91 (1.070)					coding (362/978 nt)	PP_3564	AraC family transcriptional regulator
*	?	NC_002947	= 4048216	84 (0.950)	8 (0.090)	7/238	NT	8.6%	coding (723/2418 nt)	quiA	quinate dehydrogenase
	?	NC_002947	= 4048234	89 (1.040)					coding (741/2418 nt)	quiA	quinate dehydrogenase
*	?	NC_002947	= 4069837	119 (1.340)	6 (0.070)	6/232	NT	5.7%	coding (2366/3099 nt)	mdtB	multidrug transporter membrane protein
	?	NC_002947	= 4069885	88 (1.050)					coding (2318/3099 nt)	mdtB	multidrug transporter membrane protein
*	?	NC_002947	4074198 =	NA (NA)	16 (0.190)	13/236	NT	NA	coding (1261/1329 nt)	PP_3586	transposase
	?	NC_002947	5223068 =	NA (NA)					coding (1277/1329 nt)	PP_4603	transposase
*	?	NC_002947	4079458 =	86 (0.970)	9 (0.130)	7/198	NT	11.8%	intergenic (‑218/+166)	sdaC/amaC	serine:H+ symport permease/D‑lysine aminotransferase
	?	NC_002947	4079575 =	66 (0.930)					intergenic (‑335/+49)	sdaC/amaC	serine:H+ symport permease/D‑lysine aminotransferase
*	?	NC_002947	= 4131170	111 (1.250)	15 (0.180)	14/230	NT	12.5%	intergenic (+38/+74)	PP_3634/PP_3635	GNAT family acetyltransferase/sulfonate ABC transporter permease
	?	NC_002947	= 4131200	106 (1.280)					intergenic (+68/+44)	PP_3634/PP_3635	GNAT family acetyltransferase/sulfonate ABC transporter permease
*	?	NC_002947	= 4132690	94 (1.060)	7 (0.080)	7/236	NT	7.3%	coding (515/1206 nt)	PP_3636	sulfonate ABC transporter substrate‑binding protein
	?	NC_002947	= 4132705	88 (1.040)					coding (500/1206 nt)	PP_3636	sulfonate ABC transporter substrate‑binding protein
*	?	NC_002947	= 4139817	92 (1.040)	5 (0.060)	4/236	NT	5.2%	coding (706/1041 nt)	PP_3644	monooxygenase subunit
	?	NC_002947	= 4139831	93 (1.100)					coding (720/1041 nt)	PP_3644	monooxygenase subunit
*	?	NC_002947	= 4150085	58 (0.660)	17 (0.230)	10/210	NT	24.2%	intergenic (+40/‑357)	PP_3654/PP_3655	leucine‑responsive regulatory protein/cytosine/purine/uracil/thiamine/allantoin permease family protein
	?	NC_002947	= 4150116	57 (0.760)					intergenic (+71/‑326)	PP_3654/PP_3655	leucine‑responsive regulatory protein/cytosine/purine/uracil/thiamine/allantoin permease family protein
*	?	NC_002947	4163283 =	102 (1.150)	7 (0.080)	7/232	NT	7.1%	coding (223/1329 nt)	pssA	CDP‑diacylglycerol‑‑serine O‑phosphatidyltransferase
	?	NC_002947	4163312 =	88 (1.050)					coding (194/1329 nt)	pssA	CDP‑diacylglycerol‑‑serine O‑phosphatidyltransferase
*	?	NC_002947	4246065 =	100 (1.130)	12 (0.150)	12/230	NT	12.1%	coding (254/1230 nt)	alr	alanine racemase
	?	NC_002947	4246096 =	81 (0.980)					coding (223/1230 nt)	alr	alanine racemase
*	?	NC_002947	4248529 =	92 (1.040)	5 (0.060)	5/232	NT	5.4%	coding (1542/2118 nt)	PP_3724	acyl‑CoA synthetase
	?	NC_002947	4248582 =	90 (1.080)					coding (1489/2118 nt)	PP_3724	acyl‑CoA synthetase
*	?	NC_002947	4291429 =	93 (1.050)	5 (0.060)	5/234	NT	5.3%	coding (1202/3468 nt)	PP_3761	two‑component system sensor histidine kinase/response regulator
	?	NC_002947	4291454 =	90 (1.070)					coding (1177/3468 nt)	PP_3761	two‑component system sensor histidine kinase/response regulator
*	?	NC_002947	= 4296922	68 (0.770)	4 (0.050)	4/242	NT	5.7%	intergenic (+45/‑53)	gloA/PP_3767	lactoylglutathione lyase/hypothetical protein
	?	NC_002947	= 4296963	66 (0.760)					intergenic (+86/‑12)	gloA/PP_3767	lactoylglutathione lyase/hypothetical protein
*	?	NC_002947	4303031 =	91 (1.030)	10 (0.120)	9/234	NT	10.2%	coding (178/207 nt)	PP_5627	hypothetical protein
	?	NC_002947	4303057 =	89 (1.060)					coding (204/207 nt)	PP_5627	hypothetical protein
*	?	NC_002947	4330902 =	99 (1.120)	5 (0.060)	5/232	NT	5.0%	coding (304/747 nt)	PP_3802	cation ABC transporter ATP‑binding protein
	?	NC_002947	4330967 =	96 (1.150)					coding (369/747 nt)	PP_3802	cation ABC transporter ATP‑binding protein
*	?	NC_002947	= 4345623	96 (1.080)	7 (0.080)	6/238	NT	7.4%	coding (1155/1308 nt)	PP_3818	phosphate‑binding protein
	?	NC_002947	= 4345670	83 (0.970)					coding (1202/1308 nt)	PP_3818	phosphate‑binding protein
*	?	NC_002947	4348540 =	NA (NA)	5 (0.060)	4/238	NT	NA	coding (140/1422 nt)	PP_3820	group II intron‑encoding maturase
	?	NC_002947	4392901 =	NA (NA)					coding (158/1422 nt)	PP_3868	group II intron‑encoding maturase
*	?	NC_002947	4350173 =	93 (1.050)	12 (0.160)	10/212	NT	13.3%	intergenic (‑181/+56)	galU/PP_3822	UTP‑glucose‑1‑phosphate uridylyltransferase/cytochrome c family protein
	?	NC_002947	4350224 =	77 (1.010)					intergenic (‑232/+5)	galU/PP_3822	UTP‑glucose‑1‑phosphate uridylyltransferase/cytochrome c family protein
*	?	NC_002947	4395254 =	85 (0.960)	4 (0.050)	4/232	NT	5.2%	coding (564/594 nt)	PP_3871	hypothetical protein
	?	NC_002947	4395288 =	67 (0.800)					coding (530/594 nt)	PP_3871	hypothetical protein
*	?	NC_002947	= 4443120	85 (0.960)	8 (0.090)	5/236	NT	8.5%	coding (906/1314 nt)	nicT	metabolite transport protein NicT
	?	NC_002947	= 4443151	90 (1.060)					coding (875/1314 nt)	nicT	metabolite transport protein NicT
*	?	NC_002947	= 4481903	80 (0.900)	10 (0.120)	8/226	NT	11.4%	intergenic (+402/‑136)	PP_3972/PP_3974	short‑chain dehydrogenase/reductase family oxidoreductase/LysR family transcriptional regulator
	?	NC_002947	= 4481911	82 (1.010)					intergenic (+410/‑128)	PP_3972/PP_3974	short‑chain dehydrogenase/reductase family oxidoreductase/LysR family transcriptional regulator
*	?	NC_002947	4508707 =	78 (0.880)	5 (0.060)	5/240	NT	6.1%	coding (118/1392 nt)	cysG	multifunctional uroporphyrinogen‑III C‑methyltransferase/precorrin‑2 dehydrogenase/sirohydrochlorin ferrochelatase
	?	NC_002947	4508750 =	77 (0.890)					coding (75/1392 nt)	cysG	multifunctional uroporphyrinogen‑III C‑methyltransferase/precorrin‑2 dehydrogenase/sirohydrochlorin ferrochelatase
*	?	NC_002947	= 4533623	116 (1.310)	8 (0.100)	8/222	NT	7.2%	intergenic (+21/‑153)	PP_4020/cpo	oxidoreductase/non‑heme chloroperoxidase
	?	NC_002947	= 4533688	101 (1.270)					intergenic (+86/‑88)	PP_4020/cpo	oxidoreductase/non‑heme chloroperoxidase
*	?	NC_002947	4541345 =	75 (0.850)	8 (0.090)	6/236	NT	9.6%	coding (18/1503 nt)	nhaB	Na(+)/H(+) antiporter NhaB
	?	NC_002947	4541382 =	78 (0.920)					coding (55/1503 nt)	nhaB	Na(+)/H(+) antiporter NhaB
*	?	NC_002947	= 4545349	91 (1.030)	12 (0.150)	8/226	NT	12.0%	coding (501/1284 nt)	hyuC	bifunctional N‑carbamoyl‑beta‑alanine amidohydrolase/allantoine amidohydrolase
	?	NC_002947	= 4545362	92 (1.130)					coding (488/1284 nt)	hyuC	bifunctional N‑carbamoyl‑beta‑alanine amidohydrolase/allantoine amidohydrolase
*	?	NC_002947	= 4564014	69 (0.780)	5 (0.060)	5/230	NT	7.0%	intergenic (‑110/‑788)	vgrG‑III/glgA	type VI secretion system protein/glycogen synthase
	?	NC_002947	= 4564029	68 (0.820)					intergenic (‑125/‑773)	vgrG‑III/glgA	type VI secretion system protein/glycogen synthase
*	?	NC_002947	= 4569256	99 (1.120)	5 (0.060)	5/234	NT	5.2%	coding (1142/2070 nt)	malQ	4‑alpha‑glucanotransferase
	?	NC_002947	= 4569279	88 (1.050)					coding (1165/2070 nt)	malQ	4‑alpha‑glucanotransferase
*	?	NC_002947	= 4572333	104 (1.170)	7 (0.080)	5/234	NT	6.1%	coding (2153/2775 nt)	treY	maltooligosyl trehalose synthase
	?	NC_002947	= 4572365	116 (1.380)					coding (2185/2775 nt)	treY	maltooligosyl trehalose synthase
*	?	NC_002947	4577844 =	106 (1.200)	15 (0.180)	12/236	NT	13.3%	intergenic (+9/+100)	PP_4057/glgB	membrane protein/1,4‑alpha‑glucan branching enzyme
	?	NC_002947	4577929 =	94 (1.110)					intergenic (+94/+15)	PP_4057/glgB	membrane protein/1,4‑alpha‑glucan branching enzyme
*	?	NC_002947	= 4583538	76 (0.860)	6 (0.080)	5/206	NT	7.8%	intergenic (‑67/+104)	treSB/glgE	bifunctional trehalose synthase B/maltokinase/alpha‑1,4‑glucan:maltose‑1‑phosphate maltosyltransferase
	?	NC_002947	= 4583599	79 (1.070)					intergenic (‑128/+43)	treSB/glgE	bifunctional trehalose synthase B/maltokinase/alpha‑1,4‑glucan:maltose‑1‑phosphate maltosyltransferase
*	?	NC_002947	4586063 =	19 (0.210)	13 (0.210)	12/170	NT	44.0%	intergenic (+102/+115)	PP_4061/PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase
	?	NC_002947	4586167 =	20 (0.330)					intergenic (+206/+11)	PP_4061/PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase
*	?	NC_002947	= 4586100	17 (0.190)	34 (0.560)	21/170	NT	68.2%	intergenic (+139/+78)	PP_4061/PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase
	?	NC_002947	= 4586128	20 (0.330)					intergenic (+167/+50)	PP_4061/PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase
*	?	NC_002947	= 4588043	104 (1.170)	11 (0.140)	10/218	NT	11.1%	intergenic (‑183/‑139)	PP_4063/ivd	long‑chain fatty acid‑‑CoA ligase/isovaleryl‑CoA dehydrogenase
	?	NC_002947	= 4588104	84 (1.070)					intergenic (‑244/‑78)	PP_4063/ivd	long‑chain fatty acid‑‑CoA ligase/isovaleryl‑CoA dehydrogenase
*	?	NC_002947	4605393 =	94 (1.060)	8 (0.100)	7/234	NT	8.8%	coding (763/1767 nt)	PP_4077	hypothetical protein
	?	NC_002947	4605420 =	77 (0.910)					coding (790/1767 nt)	PP_4077	hypothetical protein
*	?	NC_002947	4642906 =	110 (1.240)	7 (0.080)	7/230	NT	6.9%	coding (803/897 nt)	PP_4107	LysR family transcriptional regulator
	?	NC_002947	4642946 =	87 (1.050)					coding (843/897 nt)	PP_4107	LysR family transcriptional regulator
*	?	NC_002947	= 4643020	95 (1.070)	12 (0.150)	9/228	NT	11.6%	intergenic (+20/‑160)	PP_4107/PP_4108	LysR family transcriptional regulator/4‑aminobutyrate aminotransferase
	?	NC_002947	= 4643043	95 (1.160)					intergenic (+43/‑137)	PP_4107/PP_4108	LysR family transcriptional regulator/4‑aminobutyrate aminotransferase
*	?	NC_002947	4647603 =	47 (0.530)	21 (0.350)	15/168	NT	48.3%	intergenic (+10/+121)	fusB/PP_4112	elongation factor G 2/sulfate transporter
	?	NC_002947	4647711 =	13 (0.220)					intergenic (+118/+13)	fusB/PP_4112	elongation factor G 2/sulfate transporter
*	?	NC_002947	4673479 =	98 (1.110)	6 (0.070)	6/240	NT	6.1%	coding (205/2073 nt)	PP_4137	outer membrane siderophore receptor
	?	NC_002947	4673520 =	88 (1.020)					coding (246/2073 nt)	PP_4137	outer membrane siderophore receptor
*	?	NC_002947	4677752 =	76 (0.860)	6 (0.070)	6/236	NT	8.0%	coding (868/2250 nt)	ldcC	lysine decarboxylase
	?	NC_002947	4677777 =	65 (0.770)					coding (843/2250 nt)	ldcC	lysine decarboxylase
*	?	NC_002947	4707138 =	100 (1.130)	8 (0.090)	8/238	NT	7.1%	coding (207/795 nt)	PP_4163	hypothetical protein
	?	NC_002947	4707166 =	114 (1.330)					coding (179/795 nt)	PP_4163	hypothetical protein
*	?	NC_002947	4727770 =	118 (1.330)	7 (0.080)	7/234	NT	6.2%	intergenic (‑343/+61)	brnQ/sucD	branched‑chain amino acid transporter/succinyl‑CoA synthetase subunit alpha
	?	NC_002947	4727819 =	99 (1.180)					intergenic (‑392/+12)	brnQ/sucD	branched‑chain amino acid transporter/succinyl‑CoA synthetase subunit alpha
*	?	NC_002947	= 4727783	110 (1.240)	11 (0.130)	11/240	NT	9.4%	intergenic (‑356/+48)	brnQ/sucD	branched‑chain amino acid transporter/succinyl‑CoA synthetase subunit alpha
	?	NC_002947	= 4727805	105 (1.220)					intergenic (‑378/+26)	brnQ/sucD	branched‑chain amino acid transporter/succinyl‑CoA synthetase subunit alpha
*	?	NC_002947	4731520 =	126 (1.420)	7 (0.080)	7/242	NT	5.8%	intergenic (‑31/+63)	lpdG/sucB	dihydrolipoyl dehydrogenase/2‑oxoglutarate dehydrogenase dihydrolipoyltranssuccinylase subunit
	?	NC_002947	4731576 =	103 (1.180)					intergenic (‑87/+7)	lpdG/sucB	dihydrolipoyl dehydrogenase/2‑oxoglutarate dehydrogenase dihydrolipoyltranssuccinylase subunit
*	?	NC_002947	4742647 =	72 (0.810)	4 (0.050)	4/232	NT	5.2%	coding (1390/1593 nt)	PP_4197	GntR family transcriptional regulator
	?	NC_002947	4742701 =	79 (0.950)					coding (1336/1593 nt)	PP_4197	GntR family transcriptional regulator
*	?	NC_002947	4755172 =	103 (1.160)	6 (0.070)	4/228	NT	6.2%	coding (368/1965 nt)	pvdT	pyoverdine ABC transporter ATP‑binding protein/permease
	?	NC_002947	4755215 =	86 (1.050)					coding (411/1965 nt)	pvdT	pyoverdine ABC transporter ATP‑binding protein/permease
*	?	NC_002947	4772452 =	101 (1.140)	6 (0.070)	6/232	NT	6.1%	coding (6860/10413 nt)	pvdD	non‑ribosomal peptide synthetase
	?	NC_002947	4772493 =	90 (1.080)					coding (6819/10413 nt)	pvdD	non‑ribosomal peptide synthetase
*	?	NC_002947	4773140 =	116 (1.310)	11 (0.130)	9/240	NT	9.9%	coding (6172/10413 nt)	pvdD	non‑ribosomal peptide synthetase
	?	NC_002947	4773185 =	86 (1.000)					coding (6127/10413 nt)	pvdD	non‑ribosomal peptide synthetase
*	?	NC_002947	4773349 =	74 (0.840)	7 (0.080)	6/236	NT	8.0%	coding (5963/10413 nt)	pvdD	non‑ribosomal peptide synthetase
	?	NC_002947	4773394 =	89 (1.050)					coding (5918/10413 nt)	pvdD	non‑ribosomal peptide synthetase
*	?	NC_002947	4787419 =	100 (1.130)	6 (0.070)	5/234	NT	5.6%	coding (6466/6525 nt)	pvdI	non‑ribosomal peptide synthetase
	?	NC_002947	4787458 =	107 (1.270)					coding (6427/6525 nt)	pvdI	non‑ribosomal peptide synthetase
*	?	NC_002947	= 4792331	82 (0.930)	4 (0.050)	4/238	NT	5.2%	coding (1554/6525 nt)	pvdI	non‑ribosomal peptide synthetase
	?	NC_002947	= 4792360	68 (0.790)					coding (1525/6525 nt)	pvdI	non‑ribosomal peptide synthetase
*	?	NC_002947	= 4801631	76 (0.860)	5 (0.060)	5/234	NT	6.1%	coding (451/627 nt)	PP_4229	hypothetical protein
	?	NC_002947	= 4801643	81 (0.960)					coding (463/627 nt)	PP_4229	hypothetical protein
*	?	NC_002947	4808219 =	1 (0.010)	32 (0.510)	20/176	NT	56.8%	intergenic (‑283/‑272)	PP_4234/dsbD‑II	bifunctional aldehyde oxidase/xanthine dehydrogenase/thiol/disulfide interchange protein 2
	?	NC_002947	= 5988991	48 (0.760)					intergenic (+229/‑317)	kefB‑III/PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
*	?	NC_002947	4824649 =	109 (1.230)	6 (0.070)	6/234	NT	5.6%	coding (6586/12954 nt)	pvdL	non‑ribosomal peptide synthetase
	?	NC_002947	4824674 =	100 (1.190)					coding (6561/12954 nt)	pvdL	non‑ribosomal peptide synthetase
*	?	NC_002947	= 4861163	110 (1.240)	15 (0.180)	12/238	NT	16.2%	intergenic (‑69/+168)	ligA/PP_4275	DNA ligase/cell division protein ZipA
	?	NC_002947	= 4861272	49 (0.570)					intergenic (‑178/+59)	ligA/PP_4275	DNA ligase/cell division protein ZipA
*	?	NC_002947	4861173 =	115 (1.300)	11 (0.160)	8/196	NT	13.8%	intergenic (‑79/+158)	ligA/PP_4275	DNA ligase/cell division protein ZipA
	?	NC_002947	4861264 =	46 (0.650)					intergenic (‑170/+67)	ligA/PP_4275	DNA ligase/cell division protein ZipA
*	?	NC_002947	4878547 =	110 (1.240)	7 (0.080)	7/236	NT	6.7%	coding (225/516 nt)	pucL	2‑oxo‑4‑hydroxy‑4‑carboxy‑5‑ureidoimidazoline decarboxylase
	?	NC_002947	4878573 =	89 (1.050)					coding (251/516 nt)	pucL	2‑oxo‑4‑hydroxy‑4‑carboxy‑5‑ureidoimidazoline decarboxylase
*	?	NC_002947	= 4886209	46 (0.520)	13 (0.190)	10/188	NT	24.1%	intergenic (+43/+80)	PP_4295/PP_4296	TetR family transcriptional regulator/hypothetical protein
	?	NC_002947	= 4886238	47 (0.700)					intergenic (+72/+51)	PP_4295/PP_4296	TetR family transcriptional regulator/hypothetical protein
*	?	NC_002947	4889614 =	41 (0.460)	10 (0.150)	7/192	NT	20.4%	intergenic (+15/‑138)	hyi/glxR	hydroxypyruvate isomerase/2‑hydroxy‑3‑oxopropionate reductase
	?	NC_002947	4889705 =	46 (0.670)					intergenic (+106/‑47)	hyi/glxR	hydroxypyruvate isomerase/2‑hydroxy‑3‑oxopropionate reductase
*	?	NC_002947	= 4889640	42 (0.470)	5 (0.070)	5/192	NT	11.3%	intergenic (+41/‑112)	hyi/glxR	hydroxypyruvate isomerase/2‑hydroxy‑3‑oxopropionate reductase
	?	NC_002947	= 4889677	46 (0.670)					intergenic (+78/‑75)	hyi/glxR	hydroxypyruvate isomerase/2‑hydroxy‑3‑oxopropionate reductase
*	?	NC_002947	4893598 =	59 (0.670)	9 (0.130)	8/192	NT	14.6%	intergenic (+28/‑180)	pyk/PP_4302	pyruvate kinase/urea transporter
	?	NC_002947	4893677 =	59 (0.860)					intergenic (+107/‑101)	pyk/PP_4302	pyruvate kinase/urea transporter
*	?	NC_002947	= 4893624	59 (0.670)	6 (0.090)	6/192	NT	10.3%	intergenic (+54/‑154)	pyk/PP_4302	pyruvate kinase/urea transporter
	?	NC_002947	= 4893649	59 (0.860)					intergenic (+79/‑129)	pyk/PP_4302	pyruvate kinase/urea transporter
*	?	NC_002947	4896423 =	63 (0.710)	19 (0.260)	17/204	NT	29.4%	intergenic (+11/‑197)	PP_4304/sbp‑I	VIC family cation transporter/sulfate ABC transporter substrate‑binding protein
	?	NC_002947	4896512 =	39 (0.530)					intergenic (+100/‑108)	PP_4304/sbp‑I	VIC family cation transporter/sulfate ABC transporter substrate‑binding protein
*	?	NC_002947	= 4896443	55 (0.620)	27 (0.370)	14/204	NT	39.0%	intergenic (+31/‑177)	PP_4304/sbp‑I	VIC family cation transporter/sulfate ABC transporter substrate‑binding protein
	?	NC_002947	= 4896490	39 (0.530)					intergenic (+78/‑130)	PP_4304/sbp‑I	VIC family cation transporter/sulfate ABC transporter substrate‑binding protein
*	?	NC_002947	4917157 =	93 (1.050)	7 (0.080)	6/236	NT	7.5%	coding (320/633 nt)	ccmA	cytochrome c biogenesis ABC transporter ATP‑binding protein CcmA
	?	NC_002947	4917179 =	83 (0.980)					coding (298/633 nt)	ccmA	cytochrome c biogenesis ABC transporter ATP‑binding protein CcmA
*	?	NC_002947	= 4921342	79 (0.890)	6 (0.070)	5/234	NT	7.2%	coding (1706/2682 nt)	PP_4330	toxin‑like protein
	?	NC_002947	= 4921350	79 (0.940)					coding (1714/2682 nt)	PP_4330	toxin‑like protein
*	?	NC_002947	4926848 =	85 (0.960)	6 (0.070)	5/236	NT	7.4%	coding (1079/1113 nt)	cheBA	chemotaxis response regulator protein‑glutamate methylesterase
	?	NC_002947	4926891 =	69 (0.810)					coding (1036/1113 nt)	cheBA	chemotaxis response regulator protein‑glutamate methylesterase
*	?	NC_002947	4928740 =	87 (0.980)	5 (0.060)	4/238	NT	5.7%	coding (1477/2244 nt)	cheA	chemotaxis histidine kinase CheA
	?	NC_002947	4928767 =	82 (0.960)					coding (1450/2244 nt)	cheA	chemotaxis histidine kinase CheA
*	?	NC_002947	4929832 =	114 (1.290)	6 (0.070)	6/224	NT	6.1%	coding (385/2244 nt)	cheA	chemotaxis histidine kinase CheA
	?	NC_002947	4929912 =	82 (1.020)					coding (305/2244 nt)	cheA	chemotaxis histidine kinase CheA
*	?	NC_002947	4934874 =	100 (1.130)	10 (0.110)	10/246	NT	9.2%	coding (1761/2130 nt)	flhA	flagellar export pore protein
	?	NC_002947	4934899 =	97 (1.100)					coding (1736/2130 nt)	flhA	flagellar export pore protein
*	?	NC_002947	4946641 =	94 (1.060)	10 (0.120)	9/234	NT	10.0%	coding (764/777 nt)	fliR	flagellar biosynthetic protein FliR
	?	NC_002947	4946676 =	91 (1.080)					coding (729/777 nt)	fliR	flagellar biosynthetic protein FliR
*	?	NC_002947	= 4949028	88 (0.990)	9 (0.110)	9/234	NT	10.0%	coding (363/486 nt)	fliN	flagellar basal‑body C‑ring protein
	?	NC_002947	= 4949050	78 (0.930)					coding (341/486 nt)	fliN	flagellar basal‑body C‑ring protein
*	?	NC_002947	4955866 =	118 (1.330)	6 (0.070)	6/234	NT	5.1%	coding (934/1374 nt)	fliI	flagellum‑specific ATP synthase
	?	NC_002947	4955891 =	112 (1.330)					coding (909/1374 nt)	fliI	flagellum‑specific ATP synthase
*	?	NC_002947	4957603 =	111 (1.250)	11 (0.140)	7/216	NT	9.8%	intergenic (‑41/+122)	fliH/fliG	flagellar assembly protein FliH/flagellar motor switch protein
	?	NC_002947	4957693 =	104 (1.340)					intergenic (‑131/+32)	fliH/fliG	flagellar assembly protein FliH/flagellar motor switch protein
*	?	NC_002947	= 4960993	125 (1.410)	8 (0.100)	7/230	NT	6.6%	intergenic (‑130/+134)	fliE/atoC	flagellar hook‑basal body complex protein FliE/two‑component system DNA‑binding transcriptional activator AtoC
	?	NC_002947	= 4961078	108 (1.310)					intergenic (‑215/+49)	fliE/atoC	flagellar hook‑basal body complex protein FliE/two‑component system DNA‑binding transcriptional activator AtoC
*	?	NC_002947	5019224 =	110 (1.240)	7 (0.080)	6/230	NT	6.7%	coding (936/996 nt)	PP_4423	hypothetical protein
	?	NC_002947	5019250 =	93 (1.120)					coding (910/996 nt)	PP_4423	hypothetical protein
*	?	NC_002947	= 5036635	NA (NA)	5 (0.060)	4/228	NT	NA	coding (78/336 nt)	PP_4442	transposase
	?	NC_002947	= 5036691	NA (NA)					coding (134/336 nt)	PP_4442	transposase
*	?	NC_002947	= 5073061	91 (1.030)	6 (0.070)	5/228	NT	6.6%	intergenic (‑163/+219)	PP_5689/PP_5690	hypothetical protein/hypothetical protein
	?	NC_002947	= 5073067	86 (1.050)					intergenic (‑169/+213)	PP_5689/PP_5690	hypothetical protein/hypothetical protein
*	?	NC_002947	= 5076166	92 (1.040)	7 (0.080)	6/234	NT	7.3%	coding (423/600 nt)	phnN	ribose 1,5‑bisphosphate phosphokinase
	?	NC_002947	= 5076170	91 (1.080)					coding (419/600 nt)	phnN	ribose 1,5‑bisphosphate phosphokinase
*	?	NC_002947	5091068 =	109 (1.230)	7 (0.080)	6/234	NT	7.2%	intergenic (‑84/+64)	astA‑II/astC	arginine N‑succinyltransferase subunit alpha/acetylornithine aminotransferase
	?	NC_002947	5091116 =	78 (0.930)					intergenic (‑132/+16)	astA‑II/astC	arginine N‑succinyltransferase subunit alpha/acetylornithine aminotransferase
*	?	NC_002947	5099995 =	57 (0.640)	7 (0.100)	6/196	NT	13.8%	intergenic (+33/+120)	PP_4488/phhR	hypothetical protein/sigma‑54 dependent transcriptional regulator
	?	NC_002947	5100077 =	42 (0.600)					intergenic (+115/+38)	PP_4488/phhR	hypothetical protein/sigma‑54 dependent transcriptional regulator
*	?	NC_002947	= 5100019	54 (0.610)	6 (0.090)	6/196	NT	12.4%	intergenic (+57/+96)	PP_4488/phhR	hypothetical protein/sigma‑54 dependent transcriptional regulator
	?	NC_002947	= 5100051	42 (0.600)					intergenic (+89/+64)	PP_4488/phhR	hypothetical protein/sigma‑54 dependent transcriptional regulator
*	?	NC_002947	5115388 =	95 (1.070)	5 (0.060)	4/230	NT	5.7%	coding (446/861 nt)	PP_4500	TrpH family protein
	?	NC_002947	5115494 =	78 (0.940)					coding (340/861 nt)	PP_4500	TrpH family protein
*	?	NC_002947	5119634 =	120 (1.360)	8 (0.100)	8/216	NT	7.4%	intergenic (+19/+112)	PP_4505/PP_4506	sensor histidine kinase/nitroreductase family protein
	?	NC_002947	5119711 =	94 (1.210)					intergenic (+96/+35)	PP_4505/PP_4506	sensor histidine kinase/nitroreductase family protein
*	?	NC_002947	5159794 =	79 (0.890)	4 (0.060)	4/184	NT	9.4%	intergenic (+9/+97)	PP_4542/PP_4543	ABC transporter ATP‑binding protein/permease/hypothetical protein
	?	NC_002947	5159871 =	18 (0.270)					intergenic (+86/+20)	PP_4542/PP_4543	ABC transporter ATP‑binding protein/permease/hypothetical protein
*	?	NC_002947	5160427 =	101 (1.140)	6 (0.070)	6/230	NT	6.2%	coding (676/1212 nt)	PP_4543	hypothetical protein
	?	NC_002947	5160466 =	87 (1.050)					coding (637/1212 nt)	PP_4543	hypothetical protein
*	?	NC_002947	5162618 =	91 (1.030)	18 (0.260)	13/194	NT	22.1%	intergenic (+93/+108)	PP_4544/PP_4545	hypothetical protein/beta‑ketodecanoyl‑ACP synthase
	?	NC_002947	5162702 =	55 (0.790)					intergenic (+177/+24)	PP_4544/PP_4545	hypothetical protein/beta‑ketodecanoyl‑ACP synthase
*	?	NC_002947	= 5164490	101 (1.140)	8 (0.090)	8/236	NT	7.1%	coding (3438/3906 nt)	hrpA	ATP‑dependent helicase HrpA
	?	NC_002947	= 5164525	112 (1.320)					coding (3403/3906 nt)	hrpA	ATP‑dependent helicase HrpA
*	?	NC_002947	5196072 =	120 (1.360)	9 (0.110)	7/232	NT	7.9%	coding (491/690 nt)	ybgJ	allophanate hydrolase subunit 1
	?	NC_002947	5196105 =	98 (1.170)					coding (458/690 nt)	ybgJ	allophanate hydrolase subunit 1
*	?	NC_002947	5201627 =	51 (0.580)	23 (0.370)	14/172	NT	49.7%	intergenic (‑65/‑115)	PP_4582/PP_4583	membrane protein/putative Peptidase
	?	NC_002947	5201722 =	11 (0.180)					intergenic (‑160/‑20)	PP_4582/PP_4583	membrane protein/putative Peptidase
*	?	NC_002947	5210267 =	75 (0.850)	10 (0.130)	8/214	NT	12.1%	intergenic (‑85/+93)	rnd/PP_4592	ribonuclease D/metal dependent hydrolase
	?	NC_002947	5210358 =	80 (1.040)					intergenic (‑176/+2)	rnd/PP_4592	ribonuclease D/metal dependent hydrolase
*	?	NC_002947	= 5210282	75 (0.850)	10 (0.130)	8/214	NT	12.1%	intergenic (‑100/+78)	rnd/PP_4592	ribonuclease D/metal dependent hydrolase
	?	NC_002947	= 5210341	80 (1.040)					intergenic (‑159/+19)	rnd/PP_4592	ribonuclease D/metal dependent hydrolase
*	?	NC_002947	= 5211498	68 (0.770)	6 (0.070)	6/234	NT	7.9%	coding (500/1638 nt)	PP_4592	metal dependent hydrolase
	?	NC_002947	= 5211513	76 (0.900)					coding (485/1638 nt)	PP_4592	metal dependent hydrolase
*	?	NC_002947	= 5237587	89 (1.010)	16 (0.200)	13/222	NT	15.8%	intergenic (+22/‑2)	PP_5700/PP_4614	hypothetical protein/hypothetical protein
	?	NC_002947	= 5237592	90 (1.130)					coding (4/387 nt)	PP_4614	hypothetical protein
*	?	NC_002947	5245198 =	78 (0.880)	7 (0.080)	6/230	NT	8.9%	coding (557/834 nt)	hmgR	Hmg transcriptional repressor
	?	NC_002947	5245249 =	71 (0.860)					coding (608/834 nt)	hmgR	Hmg transcriptional repressor
*	?	NC_002947	= 5257918	85 (0.960)	16 (0.200)	13/218	NT	17.1%	intergenic (‑69/+75)	PP_4634/PP_4635	alpha/beta family hydrolase/trans‑2‑enoyl‑CoA reductase
	?	NC_002947	= 5257961	80 (1.020)					intergenic (‑112/+32)	PP_4634/PP_4635	alpha/beta family hydrolase/trans‑2‑enoyl‑CoA reductase
*	?	NC_002947	= 5261506	94 (1.060)	6 (0.070)	4/232	NT	5.8%	coding (143/825 nt)	PP_4637	5‑methyltetrahydropteroyltriglutamate‑ homocysteine S‑methyltransferase family protein
	?	NC_002947	= 5261526	106 (1.270)					coding (123/825 nt)	PP_4637	5‑methyltetrahydropteroyltriglutamate‑ homocysteine S‑methyltransferase family protein
*	?	NC_002947	= 5277534	113 (1.280)	8 (0.090)	7/242	NT	6.9%	coding (447/1221 nt)	PP_4652	membrane protein
	?	NC_002947	= 5277572	106 (1.220)					coding (485/1221 nt)	PP_4652	membrane protein
*	?	NC_002947	= 5280967	89 (1.010)	16 (0.230)	16/196	NT	18.6%	intergenic (+52/+86)	trmA/pcaG	tRNA/tmRNA (uridine(54)‑C5)‑methyltransferase TrmA/protocatechuate 3,4‑dioxygenase subunit alpha
	?	NC_002947	= 5281003	69 (0.980)					intergenic (+88/+50)	trmA/pcaG	tRNA/tmRNA (uridine(54)‑C5)‑methyltransferase TrmA/protocatechuate 3,4‑dioxygenase subunit alpha
*	?	NC_002947	5282418 =	68 (0.770)	4 (0.050)	4/234	NT	6.2%	intergenic (‑30/‑104)	pcaH/ypfJ	protocatechuate 3,4‑dioxygenase subunit beta/zinc metalloprotease
	?	NC_002947	5282437 =	56 (0.670)					intergenic (‑49/‑85)	pcaH/ypfJ	protocatechuate 3,4‑dioxygenase subunit beta/zinc metalloprotease
*	?	NC_002947	5288442 =	83 (0.940)	9 (0.130)	8/186	NT	14.9%	intergenic (‑75/+109)	PP_4660/mdaB	LysR family transcriptional regulator/drug activity modulator B
	?	NC_002947	5288536 =	40 (0.600)					intergenic (‑169/+15)	PP_4660/mdaB	LysR family transcriptional regulator/drug activity modulator B
*	?	NC_002947	= 5315667	91 (1.030)	5 (0.060)	5/240	NT	5.0%	coding (314/852 nt)	PP_4677	CDP‑diacylglycerol‑‑serine O‑phosphatidyltransferase
	?	NC_002947	= 5315709	101 (1.170)					coding (272/852 nt)	PP_4677	CDP‑diacylglycerol‑‑serine O‑phosphatidyltransferase
*	?	NC_002947	5382446 =	19 (0.210)	11 (0.170)	9/176	NT	38.9%	intergenic (+18/+115)	smpB/pdhR	SsrA‑binding protein/DNA‑binding transcriptional regulator LldR
	?	NC_002947	5382544 =	21 (0.330)					intergenic (+116/+17)	smpB/pdhR	SsrA‑binding protein/DNA‑binding transcriptional regulator LldR
*	?	NC_002947	= 5382480	18 (0.200)	15 (0.240)	9/176	NT	47.0%	intergenic (+52/+81)	smpB/pdhR	SsrA‑binding protein/DNA‑binding transcriptional regulator LldR
	?	NC_002947	= 5382508	21 (0.330)					intergenic (+80/+53)	smpB/pdhR	SsrA‑binding protein/DNA‑binding transcriptional regulator LldR
*	?	NC_002947	5404377 =	94 (1.060)	4 (0.050)	4/214	NT	5.2%	intergenic (‑627/+90)	PP_4746/PP_4748	transposase/amino acid ABC transporter substrate‑binding protein
	?	NC_002947	5404439 =	65 (0.840)					intergenic (‑689/+28)	PP_4746/PP_4748	transposase/amino acid ABC transporter substrate‑binding protein
*	?	NC_002947	= 5428577	74 (0.840)	6 (0.070)	5/232	NT	7.9%	coding (550/921 nt)	yedA	phenylalanine/threonine exporter
	?	NC_002947	= 5428597	71 (0.850)					coding (530/921 nt)	yedA	phenylalanine/threonine exporter
*	?	NC_002947	5437693 =	87 (0.980)	7 (0.080)	6/232	NT	8.5%	noncoding (253/254 nt)	PP_mr57	P24 ncRNA
	?	NC_002947	5437717 =	68 (0.810)					noncoding (229/254 nt)	PP_mr57	P24 ncRNA
*	?	NC_002947	5477138 =	18 (0.200)	18 (0.310)	13/164	NT	58.1%	intergenic (+3/+109)	PP_4813/PP_4814	PAP2 family protein/DedA family protein/ATP‑dependent protease La domain‑containing protein
	?	NC_002947	5477237 =	14 (0.240)					intergenic (+102/+10)	PP_4813/PP_4814	PAP2 family protein/DedA family protein/ATP‑dependent protease La domain‑containing protein
*	?	NC_002947	= 5477178	13 (0.150)	13 (0.220)	9/164	NT	53.5%	intergenic (+43/+69)	PP_4813/PP_4814	PAP2 family protein/DedA family protein/ATP‑dependent protease La domain‑containing protein
	?	NC_002947	= 5477195	14 (0.240)					intergenic (+60/+52)	PP_4813/PP_4814	PAP2 family protein/DedA family protein/ATP‑dependent protease La domain‑containing protein
*	?	NC_002947	5485172 =	103 (1.160)	10 (0.140)	10/194	NT	12.0%	intergenic (+30/‑117)	purH/purD	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase
	?	NC_002947	5485246 =	66 (0.950)					intergenic (+104/‑43)	purH/purD	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase
*	?	NC_002947	5492590 =	109 (1.230)	8 (0.090)	8/236	NT	7.4%	coding (1474/1698 nt)	cobJ	precorrin‑3B C17‑methyltransferase
	?	NC_002947	5492620 =	96 (1.130)					coding (1444/1698 nt)	cobJ	precorrin‑3B C17‑methyltransferase
*	?	NC_002947	5496854 =	96 (1.080)	10 (0.120)	10/238	NT	8.9%	intergenic (‑122/‑122)	cobG/cobL	precorrin‑3B synthase/precorrin‑6Y C(5,15)‑methyltransferase
	?	NC_002947	5496938 =	111 (1.300)					intergenic (‑206/‑38)	cobG/cobL	precorrin‑3B synthase/precorrin‑6Y C(5,15)‑methyltransferase
*	?	NC_002947	5506609 =	40 (0.450)	14 (0.210)	11/188	NT	29.3%	intergenic (+20/‑179)	PP_4839/cycA	iron‑regulated membrane protein/D‑alanine/beta‑alanine/D‑serine/glycine permease
	?	NC_002947	5506680 =	37 (0.550)					intergenic (+91/‑108)	PP_4839/cycA	iron‑regulated membrane protein/D‑alanine/beta‑alanine/D‑serine/glycine permease
*	?	NC_002947	= 5506637	36 (0.410)	18 (0.270)	15/188	NT	35.8%	intergenic (+48/‑151)	PP_4839/cycA	iron‑regulated membrane protein/D‑alanine/beta‑alanine/D‑serine/glycine permease
	?	NC_002947	= 5506650	37 (0.550)					intergenic (+61/‑138)	PP_4839/cycA	iron‑regulated membrane protein/D‑alanine/beta‑alanine/D‑serine/glycine permease
*	?	NC_002947	= 5513315	78 (0.880)	10 (0.140)	8/194	NT	13.5%	intergenic (+45/‑109)	urtD/urtE	ABC transporter ATP‑binding protein/ABC transporter ATP‑binding protein
	?	NC_002947	= 5513371	67 (0.960)					intergenic (+101/‑53)	urtD/urtE	ABC transporter ATP‑binding protein/ABC transporter ATP‑binding protein
*	?	NC_002947	5537079 =	59 (0.670)	16 (0.230)	11/192	NT	22.5%	intergenic (+8/+95)	nadE/PP_4870	NH(3)‑dependent NAD(+) synthetase/azurin
	?	NC_002947	5537155 =	64 (0.930)					intergenic (+84/+19)	nadE/PP_4870	NH(3)‑dependent NAD(+) synthetase/azurin
*	?	NC_002947	= 5537105	67 (0.760)	14 (0.200)	9/192	NT	19.4%	intergenic (+34/+69)	nadE/PP_4870	NH(3)‑dependent NAD(+) synthetase/azurin
	?	NC_002947	= 5537127	64 (0.930)					intergenic (+56/+47)	nadE/PP_4870	NH(3)‑dependent NAD(+) synthetase/azurin
*	?	NC_002947	5585727 =	91 (1.030)	6 (0.070)	6/234	NT	6.3%	coding (56/2259 nt)	parC	DNA topoisomerase IV subunit A
	?	NC_002947	5585764 =	91 (1.080)					coding (19/2259 nt)	parC	DNA topoisomerase IV subunit A
*	?	NC_002947	5592701 =	89 (1.010)	7 (0.080)	7/236	NT	7.7%	coding (596/747 nt)	PP_4920	lipoprotein
	?	NC_002947	5592728 =	82 (0.970)					coding (623/747 nt)	PP_4920	lipoprotein
*	?	NC_002947	5594143 =	66 (0.750)	18 (0.260)	8/190	NT	26.1%	intergenic (‑39/+106)	PP_4921/thiC	NCS1 family transporter/phosphomethylpyrimidine synthase
	?	NC_002947	5594236 =	51 (0.750)					intergenic (‑132/+13)	PP_4921/thiC	NCS1 family transporter/phosphomethylpyrimidine synthase
*	?	NC_002947	5628645 =	103 (1.160)	9 (0.110)	8/228	NT	8.7%	intergenic (‑64/+43)	rlmJ/putP	23S rRNA (adenine(2030)‑N(6))‑methyltransferase/sodium/L‑proline transporter
	?	NC_002947	5628678 =	93 (1.130)					intergenic (‑97/+10)	rlmJ/putP	23S rRNA (adenine(2030)‑N(6))‑methyltransferase/sodium/L‑proline transporter
*	?	NC_002947	5634190 =	96 (1.080)	7 (0.080)	6/238	NT	6.9%	coding (3669/3954 nt)	putA	proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase
	?	NC_002947	5634227 =	95 (1.110)					coding (3706/3954 nt)	putA	proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase
*	?	NC_002947	= 5640320	36 (0.410)	10 (0.160)	6/178	NT	24.7%	intergenic (+41/‑69)	PP_4950/PP_4951	hypothetical protein/EmrB/QacA family drug resistance transporter
	?	NC_002947	= 5640336	35 (0.550)					intergenic (+57/‑53)	PP_4950/PP_4951	hypothetical protein/EmrB/QacA family drug resistance transporter
*	?	NC_002947	5653264 =	101 (1.140)	10 (0.120)	8/234	NT	10.0%	coding (99/252 nt)	PP_4962	hypothetical protein
	?	NC_002947	5653301 =	84 (1.000)					coding (62/252 nt)	PP_4962	hypothetical protein
*	?	NC_002947	5671666 =	44 (0.500)	8 (0.110)	7/198	NT	15.9%	intergenic (+34/‑136)	PP_4978/PP_4979	hypothetical protein/substrate‑binding protein
	?	NC_002947	5671751 =	49 (0.690)					intergenic (+119/‑51)	PP_4978/PP_4979	hypothetical protein/substrate‑binding protein
*	?	NC_002947	= 5671689	39 (0.440)	6 (0.080)	4/198	NT	13.0%	intergenic (+57/‑113)	PP_4978/PP_4979	hypothetical protein/substrate‑binding protein
	?	NC_002947	= 5671726	49 (0.690)					intergenic (+94/‑76)	PP_4978/PP_4979	hypothetical protein/substrate‑binding protein
*	?	NC_002947	= 5671843	79 (0.890)	5 (0.060)	5/238	NT	5.9%	coding (42/789 nt)	PP_4979	substrate‑binding protein
	?	NC_002947	= 5671868	82 (0.960)					coding (67/789 nt)	PP_4979	substrate‑binding protein
*	?	NC_002947	= 5698799	103 (1.160)	13 (0.170)	12/212	NT	12.9%	intergenic (+33/‑134)	hslU/PP_5002	protease HslVU ATPase subunit/hypothetical protein
	?	NC_002947	= 5698848	87 (1.140)					intergenic (+82/‑85)	hslU/PP_5002	protease HslVU ATPase subunit/hypothetical protein
*	?	NC_002947	5731921 =	77 (0.870)	6 (0.070)	5/232	NT	7.3%	coding (691/1206 nt)	hutI	imidazolonepropionase
	?	NC_002947	5731965 =	80 (0.960)					coding (647/1206 nt)	hutI	imidazolonepropionase
*	?	NC_002947	= 5734097	111 (1.250)	25 (0.310)	12/222	NT	18.7%	intergenic (‑67/+90)	proY/hutH	proline (histidine) APC transporter/histidine ammonia‑lyase
	?	NC_002947	= 5734152	118 (1.480)					intergenic (‑122/+35)	proY/hutH	proline (histidine) APC transporter/histidine ammonia‑lyase
*	?	NC_002947	5743378 =	68 (0.770)	16 (0.200)	14/228	NT	17.4%	intergenic (‑155/+92)	fbp/glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase
	?	NC_002947	5743460 =	89 (1.090)					intergenic (‑237/+10)	fbp/glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase
*	?	NC_002947	= 5743404	74 (0.840)	18 (0.230)	13/220	NT	20.3%	intergenic (‑181/+66)	fbp/glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase
	?	NC_002947	= 5743432	75 (0.950)					intergenic (‑209/+38)	fbp/glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase
*	?	NC_002947	= 5756156	116 (1.310)	10 (0.120)	8/234	NT	8.2%	coding (1214/1437 nt)	glnG	two‑component system DNA‑binding response regulator GlnL/GlnG
	?	NC_002947	= 5756173	113 (1.340)					coding (1231/1437 nt)	glnG	two‑component system DNA‑binding response regulator GlnL/GlnG
*	?	NC_002947	5756714 =	97 (1.100)	7 (0.090)	6/228	NT	7.5%	intergenic (+335/‑353)	glnG/PP_5050	two‑component system DNA‑binding response regulator GlnL/GlnG/transposase
	?	NC_002947	5756788 =	82 (1.000)					intergenic (+409/‑279)	glnG/PP_5050	two‑component system DNA‑binding response regulator GlnL/GlnG/transposase
*	?	NC_002947	5759460 =	29 (0.330)	12 (0.180)	8/182	NT	41.1%	intergenic (+13/+143)	trmL/secB	tRNA (cytosine(34)‑2'‑O)‑methyltransferase TrmL/protein‑export protein SecB
	?	NC_002947	5759552 =	13 (0.200)					intergenic (+105/+51)	trmL/secB	tRNA (cytosine(34)‑2'‑O)‑methyltransferase TrmL/protein‑export protein SecB
*	?	NC_002947	= 5759491	28 (0.320)	11 (0.170)	6/182	NT	39.5%	intergenic (+44/+112)	trmL/secB	tRNA (cytosine(34)‑2'‑O)‑methyltransferase TrmL/protein‑export protein SecB
	?	NC_002947	= 5759519	13 (0.200)					intergenic (+72/+84)	trmL/secB	tRNA (cytosine(34)‑2'‑O)‑methyltransferase TrmL/protein‑export protein SecB
*	?	NC_002947	5795530 =	101 (1.140)	6 (0.070)	5/234	NT	6.1%	coding (2426/4446 nt)	gltB	L‑glutamate synthase subunit alpha
	?	NC_002947	5795555 =	89 (1.060)					coding (2401/4446 nt)	gltB	L‑glutamate synthase subunit alpha
*	?	NC_002947	= 5816898	85 (0.960)	18 (0.210)	8/236	NT	19.7%	intergenic (+28/+101)	PP_5092/pilT	NLP/P60 protein/twitching motility protein
	?	NC_002947	= 5816983	65 (0.770)					intergenic (+113/+16)	PP_5092/pilT	NLP/P60 protein/twitching motility protein
*	?	NC_002947	5816900 =	85 (0.960)	15 (0.180)	7/228	NT	16.8%	intergenic (+30/+99)	PP_5092/pilT	NLP/P60 protein/twitching motility protein
	?	NC_002947	5816983 =	70 (0.850)					intergenic (+113/+16)	PP_5092/pilT	NLP/P60 protein/twitching motility protein
*	?	NC_002947	= 5822301	76 (0.860)	9 (0.110)	8/234	NT	10.9%	coding (205/435 nt)	PP_5099	hypothetical protein
	?	NC_002947	= 5822311	75 (0.890)					coding (215/435 nt)	PP_5099	hypothetical protein
*	?	NC_002947	= 5840321	93 (1.050)	8 (0.090)	6/240	NT	8.3%	coding (316/855 nt)	sseA	3‑mercaptopyruvate sulfurtransferase
	?	NC_002947	= 5840342	87 (1.010)					coding (295/855 nt)	sseA	3‑mercaptopyruvate sulfurtransferase
*	?	NC_002947	= 5858920	58 (0.660)	7 (0.100)	7/186	NT	12.3%	intergenic (+42/+96)	PP_5134/PP_5135	hypothetical protein/ABC transporter substrate‑binding protein
	?	NC_002947	= 5858965	56 (0.840)					intergenic (+87/+51)	PP_5134/PP_5135	hypothetical protein/ABC transporter substrate‑binding protein
*	?	NC_002947	= 5870315	71 (0.800)	5 (0.060)	5/244	NT	7.6%	intergenic (+20/+114)	PP_5144/ptsP	hypothetical protein/phosphoenolpyruvate‑dependent regulator
	?	NC_002947	= 5870410	52 (0.590)					intergenic (+115/+19)	PP_5144/ptsP	hypothetical protein/phosphoenolpyruvate‑dependent regulator
*	?	NC_002947	5870317 =	72 (0.810)	10 (0.150)	9/188	NT	16.0%	intergenic (+22/+112)	PP_5144/ptsP	hypothetical protein/phosphoenolpyruvate‑dependent regulator
	?	NC_002947	5870410 =	50 (0.740)					intergenic (+115/+19)	PP_5144/ptsP	hypothetical protein/phosphoenolpyruvate‑dependent regulator
*	?	NC_002947	5874604 =	98 (1.110)	9 (0.110)	8/224	NT	8.9%	intergenic (‑40/+108)	PP_5148/ilvA‑II	membrane protein/threonine deaminase
	?	NC_002947	5874686 =	94 (1.170)					intergenic (‑122/+26)	PP_5148/ilvA‑II	membrane protein/threonine deaminase
*	?	NC_002947	= 5874614	102 (1.150)	5 (0.060)	5/224	NT	5.1%	intergenic (‑50/+98)	PP_5148/ilvA‑II	membrane protein/threonine deaminase
	?	NC_002947	= 5874674	94 (1.170)					intergenic (‑110/+38)	PP_5148/ilvA‑II	membrane protein/threonine deaminase
*	?	NC_002947	= 5877063	94 (1.060)	8 (0.110)	6/198	NT	9.2%	intergenic (+29/+76)	rpiA/PP_5151	ribose‑5‑phosphate isomerase A/hypothetical protein
	?	NC_002947	= 5877097	83 (1.170)					intergenic (+63/+42)	rpiA/PP_5151	ribose‑5‑phosphate isomerase A/hypothetical protein
*	?	NC_002947	5897799 =	76 (0.860)	9 (0.130)	11/192	NT	14.4%	intergenic (‑143/+91)	PP_5172/PP_5173	hypothetical protein/RND family transporter
	?	NC_002947	5897875 =	48 (0.700)					intergenic (‑219/+15)	PP_5172/PP_5173	hypothetical protein/RND family transporter
*	?	NC_002947	5903827 =	84 (0.950)	19 (0.250)	11/214	NT	22.0%	intergenic (+27/+80)	PP_5176/spuH	hypothetical protein/spermidine/putrescine ABC transporter permease
	?	NC_002947	5903887 =	62 (0.810)					intergenic (+87/+20)	PP_5176/spuH	hypothetical protein/spermidine/putrescine ABC transporter permease
*	?	NC_002947	5914213 =	35 (0.400)	12 (0.180)	11/190	NT	29.3%	intergenic (+49/+104)	spuI/argA	glutamylpolyamine synthetase/amino acid N‑acetyltransferase
	?	NC_002947	5914309 =	31 (0.450)					intergenic (+145/+8)	spuI/argA	glutamylpolyamine synthetase/amino acid N‑acetyltransferase
*	?	NC_002947	= 5914240	30 (0.340)	16 (0.230)	15/190	NT	37.2%	intergenic (+76/+77)	spuI/argA	glutamylpolyamine synthetase/amino acid N‑acetyltransferase
	?	NC_002947	= 5914280	31 (0.450)					intergenic (+116/+37)	spuI/argA	glutamylpolyamine synthetase/amino acid N‑acetyltransferase
*	?	NC_002947	= 5969005	64 (0.720)	4 (0.050)	5/232	NT	5.8%	coding (87/354 nt)	PP_5724	hypothetical protein
	?	NC_002947	= 5969012	70 (0.840)					coding (94/354 nt)	PP_5724	hypothetical protein
*	?	NC_002947	= 5976882	65 (0.730)	4 (0.050)	4/234	NT	6.3%	coding (627/1491 nt)	yifB	ATP‑dependent chelatase
	?	NC_002947	= 5976907	57 (0.680)					coding (652/1491 nt)	yifB	ATP‑dependent chelatase
*	?	NC_002947	= 5990872	56 (0.630)	9 (0.110)	8/238	NT	12.3%	intergenic (‑150/‑79)	ycaC‑III/PP_5249	putative hydrolase/LysR family transcriptional regulator
	?	NC_002947	= 5990920	74 (0.860)					intergenic (‑198/‑31)	ycaC‑III/PP_5249	putative hydrolase/LysR family transcriptional regulator
*	?	NC_002947	5998147 =	85 (0.960)	6 (0.070)	5/244	NT	6.4%	coding (338/339 nt)	PP_5254	hypothetical protein
	?	NC_002947	5998177 =	91 (1.040)					coding (308/339 nt)	PP_5254	hypothetical protein
*	?	NC_002947	= 5999355	84 (0.950)	15 (0.180)	8/230	NT	16.4%	intergenic (‑154/‑167)	ycaC‑IV/PP_5256	putative hydrolase/cyclic nucleotide‑binding protein
	?	NC_002947	= 5999440	74 (0.890)					intergenic (‑239/‑82)	ycaC‑IV/PP_5256	putative hydrolase/cyclic nucleotide‑binding protein
*	?	NC_002947	6000959 =	54 (0.610)	11 (0.160)	11/186	NT	22.1%	intergenic (+10/+99)	PP_5256/amaA	cyclic nucleotide‑binding protein/L‑pipecolate oxidase
	?	NC_002947	6001053 =	37 (0.550)					intergenic (+104/+5)	PP_5256/amaA	cyclic nucleotide‑binding protein/L‑pipecolate oxidase
*	?	NC_002947	= 6000988	53 (0.600)	5 (0.070)	5/186	NT	11.5%	intergenic (+39/+70)	PP_5256/amaA	cyclic nucleotide‑binding protein/L‑pipecolate oxidase
	?	NC_002947	= 6001022	37 (0.550)					intergenic (+73/+36)	PP_5256/amaA	cyclic nucleotide‑binding protein/L‑pipecolate oxidase
*	?	NC_002947	6002391 =	157 (1.770)	11 (0.140)	10/226	NT	7.9%	intergenic (‑35/+111)	amaA/amaB	L‑pipecolate oxidase/L‑piperidine‑6‑carboxylate dehydrogenase
	?	NC_002947	6002465 =	111 (1.370)					intergenic (‑109/+37)	amaA/amaB	L‑pipecolate oxidase/L‑piperidine‑6‑carboxylate dehydrogenase
*	?	NC_002947	6003867 =	115 (1.300)	7 (0.080)	5/234	NT	6.3%	coding (126/1491 nt)	amaB	L‑piperidine‑6‑carboxylate dehydrogenase
	?	NC_002947	6003882 =	99 (1.180)					coding (111/1491 nt)	amaB	L‑piperidine‑6‑carboxylate dehydrogenase
*	?	NC_002947	= 6006630	9 (0.100)	14 (0.220)	12/174	NT	57.9%	intergenic (+42/+57)	ydcJ/PP_5261	metalloprotein/LysR family transcriptional regulator
	?	NC_002947	= 6006642	14 (0.220)					intergenic (+54/+45)	ydcJ/PP_5261	metalloprotein/LysR family transcriptional regulator
*	?	NC_002947	6009165 =	34 (0.380)	13 (0.200)	11/180	NT	50.2%	intergenic (+6/+76)	norM/PP_5263	multidrug resistance protein NorM/GGDEF domain‑containing protein
	?	NC_002947	6009242 =	1 (0.020)					coding (1667/1668 nt)	PP_5263	GGDEF domain‑containing protein
*	?	NC_002947	= 6013891	42 (0.470)	9 (0.130)	8/192	NT	18.8%	intergenic (+40/+70)	xpt/PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
	?	NC_002947	= 6013919	45 (0.650)					intergenic (+68/+42)	xpt/PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
*	?	NC_002947	= 6019326	88 (0.990)	8 (0.110)	7/200	NT	9.7%	intergenic (‑71/+74)	dadX/dadA‑II	alanine racemase/D‑amino acid:quinone oxidoreductase
	?	NC_002947	= 6019356	78 (1.090)					intergenic (‑101/+44)	dadX/dadA‑II	alanine racemase/D‑amino acid:quinone oxidoreductase
*	?	NC_002947	= 6022690	69 (0.780)	8 (0.100)	7/234	NT	11.1%	coding (842/1293 nt)	PP_5273	oxidoreductase
	?	NC_002947	= 6022719	63 (0.750)					coding (871/1293 nt)	PP_5273	oxidoreductase
*	?	NC_002947	= 6027969	67 (0.760)	14 (0.190)	11/204	NT	19.0%	intergenic (‑57/+54)	PP_5277/kauB	MFS transporter/4‑guanidinobutyraldehyde dehydrogenase
	?	NC_002947	= 6027984	64 (0.870)					intergenic (‑72/+39)	PP_5277/kauB	MFS transporter/4‑guanidinobutyraldehyde dehydrogenase
*	?	NC_002947	6050939 =	60 (0.680)	4 (0.050)	4/240	NT	6.4%	coding (1745/2109 nt)	spoT	bifunctional (p)ppGpp synthase/hydrolase
	?	NC_002947	6050964 =	59 (0.680)					coding (1770/2109 nt)	spoT	bifunctional (p)ppGpp synthase/hydrolase
*	?	NC_002947	6060487 =	83 (0.940)	18 (0.230)	10/218	NT	20.5%	intergenic (+67/+114)	PP_5311/PP_5312	signal transduction protein/hypothetical protein
	?	NC_002947	6060574 =	66 (0.840)					intergenic (+154/+27)	PP_5311/PP_5312	signal transduction protein/hypothetical protein
*	?	NC_002947	= 6063028	98 (1.110)	10 (0.120)	10/236	NT	9.2%	intergenic (‑85/‑140)	rubA/ubiC	rubredoxin‑1/chorismate pyruvate‑lyase
	?	NC_002947	= 6063060	104 (1.220)					intergenic (‑117/‑108)	rubA/ubiC	rubredoxin‑1/chorismate pyruvate‑lyase
*	?	NC_002947	= 6065594	69 (0.780)	10 (0.120)	10/236	NT	12.9%	coding (439/729 nt)	phoB	two‑component system DNA‑binding response regulator PhoB
	?	NC_002947	= 6065618	69 (0.810)					coding (463/729 nt)	phoB	two‑component system DNA‑binding response regulator PhoB
*	?	NC_002947	6086442 =	77 (0.870)	14 (0.170)	10/228	NT	16.1%	intergenic (+59/‑93)	aspA/oruR	aspartate ammonia‑lyase/ornithine utilization transcriptional regulator
	?	NC_002947	6086469 =	75 (0.910)					intergenic (+86/‑66)	aspA/oruR	aspartate ammonia‑lyase/ornithine utilization transcriptional regulator
*	?	NC_002947	6103431 =	116 (1.310)	8 (0.090)	7/238	NT	6.7%	coding (208/855 nt)	PP_5353	hypothetical protein
	?	NC_002947	6103462 =	110 (1.280)					coding (239/855 nt)	PP_5353	hypothetical protein
*	?	NC_002947	= 6137631	106 (1.200)	6 (0.070)	6/236	NT	5.7%	coding (30/1254 nt)	czcC	CzcC family metal RND transporter outer membrane protein
	?	NC_002947	= 6137641	97 (1.140)					coding (40/1254 nt)	czcC	CzcC family metal RND transporter outer membrane protein